CN103530451A - Multi-grid Chebyshev parallel spectral element method with complex medium elastic wave propagation and simulation - Google Patents
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Abstract
本发明公开了一种多网格切比雪夫并行谱元方法。该方法包括:a.将计算区域划分为大而规则的单元;b.在单元内定义主网格和辅助网格,主网格为切比雪夫配置点;c.利用主网格将单元内波场作切比雪夫截断展开,利用辅助网格将单元内介质参数和外力作截断展开;d.将波场、介质参数和外力的截断展开式代入波动方程,得到单元质量矩阵、单元刚度矩阵和单元外力向量;e.基于各单元的单元质量矩阵、单元刚度矩阵和单元外力向量,在主网格上求解弹性波方程。
The invention discloses a multi-grid Chebyshev parallel spectrum element method. The method includes: a. Divide the calculation area into large and regular cells; b. Define the main grid and the auxiliary grid in the unit, the main grid is the Chebyshev configuration point; c. Use the main grid to divide the unit The wave field is truncated by Chebyshev, and the medium parameters and external forces in the element are truncated and expanded by using the auxiliary grid; d. Substitute the truncated expansions of the wave field, medium parameters, and external forces into the wave equation to obtain the element mass matrix and element stiffness matrix and the element external force vector; e. Based on the element mass matrix, element stiffness matrix and element external force vector of each element, the elastic wave equation is solved on the main grid.
Description
技术领域technical field
本发明涉及地球物理,工程地震学,计算声学等领域的高性能计算。The invention relates to high-performance computing in the fields of geophysics, engineering seismology, computational acoustics, and the like.
背景技术Background technique
复杂介质中弹性波的传播模拟在地球物理,工程地震学和计算声学等领域具有重要地位。如何找到一种更精确、更快速、更适宜并行化的数值模拟方法也一直是国、内外相关领域研究者的工作目标和重点。The simulation of elastic wave propagation in complex media plays an important role in the fields of geophysics, engineering seismology and computational acoustics. How to find a numerical simulation method that is more accurate, faster, and more suitable for parallelization has always been the goal and focus of researchers in related fields at home and abroad.
当前在弹性波方程模拟中普遍使用的数值方法,主要有有限差分法、有限元法、伪谱法和谱元法等。它们有各自的优缺点并在不同的领域得到应用。Numerical methods currently widely used in the simulation of elastic wave equations mainly include finite difference method, finite element method, pseudospectral method, and spectral element method. They have their own advantages and disadvantages and are applied in different fields.
有限差分法将方程中的导数用差分近似,从而将偏微分方程转换为代数方程来求解,其误差由离散化配置点数目和Taylor级数的截断误差决定。有限差分法由于编程简捷和计算速度较快被广泛应用于计算地球物理和工程地震中。但低阶有限差分法需要大量的网格点来保证精度,而高阶有限差分法又很难高效地处理自由界面和复杂结构问题。The finite difference method approximates the derivative in the equation with a difference, thus transforming the partial differential equation into an algebraic equation for solution, and its error is determined by the number of discretized configuration points and the truncation error of the Taylor series. The finite difference method is widely used in computational geophysics and engineering earthquakes because of its simple programming and fast calculation speed. However, the low-order finite difference method requires a large number of grid points to ensure the accuracy, and the high-order finite difference method is difficult to deal with free interfaces and complex structures efficiently.
有限元方法基于波动方程的弱形式,将计算区域划分为有限个互不重叠的单元,在每个单元内,波场由低阶多项式(如分段线性函数)来近似。有限元法适合处理边界和内部复杂结构,在结构分析和瞬态模拟方面获得了广泛的应用。但有限元法在大型的弹性波方程模拟领域应用相对较少,其原因一是有限元法需要耗用大量计算资源,二是低阶有限元存在频散现象,而通常的高阶有限元存在伪波。Based on the weak form of the wave equation, the finite element method divides the calculation area into a finite number of non-overlapping units. In each unit, the wave field is approximated by a low-order polynomial (such as a piecewise linear function). The finite element method is suitable for dealing with boundary and internal complex structures, and has been widely used in structural analysis and transient simulation. However, the finite element method is relatively seldom used in the field of large-scale elastic wave equation simulation. The reason is that the finite element method consumes a lot of computing resources, and the second is that the low-order finite element has dispersion phenomenon, while the usual high-order finite element has false wave.
伪谱法利用无限可微的全局函数(如富里叶Fourier级数),将问题从物理空间转化为波数域进行处理,具有良好的处敛性。伪谱法只需要很少的空间网格点数即可达到很高的精度。为了处理边界条件,在空间展开时经常使用切比雪夫Chebyshev或拉格朗日Legendre正交多项式来取代Fourier级数。但由于正交多项式的配置点分布很不均匀,给时间步长的选择带来很大限制。同时,如同有限差分法一样,伪谱法不能自如地处理弯曲的自由界面和复杂结构的问题。为解决这类问题有人提出了弯曲坐标和区域分解等方法,但代价是计算量的增加。The pseudospectral method uses infinitely differentiable global functions (such as Fourier series) to transform the problem from the physical space into the wavenumber domain for processing, and has good convergence. The pseudospectral method requires only a small number of spatial grid points to achieve high accuracy. In order to deal with boundary conditions, Chebyshev or Lagrange Legendre orthogonal polynomials are often used instead of Fourier series in space expansion. However, due to the uneven distribution of the configuration points of the orthogonal polynomial, it brings great restrictions to the choice of time step. At the same time, like the finite difference method, the pseudospectral method cannot easily deal with the problem of curved free interfaces and complex structures. In order to solve this kind of problem, some people have proposed methods such as curved coordinates and domain decomposition, but the cost is the increase of calculation amount.
谱元法由Patera在1984年提出,早期主要应用于流体力学。Seriani等在1991年首次将Chebychev谱元法引入到声波方程的数值模拟中,各国研究者在其后做了大量的相关研究。它把有限元法和伪谱法相结合,兼具了有限元处理边界和结构的灵活性和伪谱法的快速收敛特性。在达到相同的精度前提下,可以采用比传统有限元更稀疏的单元划分,减少了计算时间和内存需求。The spectral element method was proposed by Patera in 1984, and it was mainly used in fluid mechanics in the early days. Seriani et al first introduced the Chebychev spectral element method into the numerical simulation of the acoustic wave equation in 1991, and researchers from various countries have done a lot of related research thereafter. It combines the finite element method and the pseudospectral method, and has both the flexibility of the finite element method for dealing with boundaries and structures and the fast convergence characteristics of the pseudospectral method. Under the premise of achieving the same accuracy, it can use more sparse element division than the traditional finite element, which reduces the calculation time and memory requirements.
谱元法的基本方法是在每一个单元上用高阶谱展开。选取以截断的正交多项式表示的基函数,在各个单元上利用配置点插值,以提高解的收敛速度。其主要步骤是:(1)首先把计算的区域分成许多子域(单元),每个子域由若干节点(配置点)组成;(2)在每个子域中把近似解表示成截断的正交多项式展开;(3)用Galerkin方法求解正交问题的变分格式,得到全局的近似解。The basic method of the spectral element method is to use high-order spectral expansion on each unit. The basis function represented by truncated orthogonal polynomial is selected, and interpolation is used on each unit to improve the convergence speed of the solution. Its main steps are: (1) first divide the calculated area into many sub-domains (units), each sub-domain is composed of several nodes (configuration points); (2) express the approximate solution as a truncated orthogonal Polynomial expansion; (3) Use Galerkin method to solve the variational scheme of the orthogonal problem, and obtain the global approximate solution.
谱元法可以用较稀疏的网格和单元获得较高精度,但传统的谱元法中,每个单元内只能有单一均匀介质,某些情况下严重降低计算效率。比如当介质结构复杂,变化尺度很小甚至小于波长时,必须按介质变化的小尺度划分单元和求解,这样将会造成极大的计算规模。The spectral element method can obtain higher precision with sparser grids and cells, but in the traditional spectral element method, there can only be a single homogeneous medium in each cell, which seriously reduces the computational efficiency in some cases. For example, when the structure of the medium is complex and the scale of change is small or even smaller than the wavelength, the units must be divided and solved according to the small scale of medium change, which will result in a huge calculation scale.
此外,传统的谱元法求解波动方程时,需要形成全局刚度矩阵和质量矩阵,考虑衰减时还需引进阻尼矩阵,需要耗费大量的存贮空间,在算法上限制了其并行化的效率。注意到在波动方程的时间迭代过程中,需要做多次矩阵和向量乘积,如Spk,这里S和pk分别为全局刚度(或质量)矩阵和全局向量。考虑到全局矩阵的稀疏特性,全局的矩阵和相量相乘耗费了大量的计算时间。In addition, when the traditional spectral element method solves the wave equation, it needs to form a global stiffness matrix and a mass matrix. When considering attenuation, it also needs to introduce a damping matrix, which consumes a lot of storage space and limits the efficiency of its parallelization in the algorithm. Note that in the time iteration process of the wave equation, it is necessary to do multiple matrix and vector products, such as Sp k , where S and p k are the global stiffness (or mass) matrix and global vector, respectively. Considering the sparse nature of the global matrix, the global matrix and phasor multiplication consumes a lot of computing time.
以上两点都极大地阻碍了谱元法在地球物理,工程地震学,计算声学等领域的大规模实际应用。The above two points have greatly hindered the large-scale practical application of spectral element method in geophysics, engineering seismology, computational acoustics and other fields.
发明内容Contents of the invention
本发明的目的在于提供一种能够克服上述缺点的算法。The object of the present invention is to provide an algorithm capable of overcoming the above-mentioned disadvantages.
为此,本发明提供一种多网格Chebyshev并行谱元方法。该方法包括:Therefore, the present invention provides a multi-grid Chebyshev parallel spectrum element method. The method includes:
a.将计算区域划分为大而规则的单元;a. Divide the computing area into large and regular units;
b.在单元内定义主网格和辅助网格,主网格为Chebyshev配置点;b. Define the main grid and auxiliary grid in the unit, the main grid is the Chebyshev configuration point;
c.利用主网格将单元内波场作Chebyshev截断展开,利用辅助网格将单元内介质参数和外力作截断展开;c. Use the main grid to perform Chebyshev truncation and expansion of the wave field in the unit, and use the auxiliary grid to perform truncation and expansion of the medium parameters and external forces in the unit;
d.将波场、介质参数和外力的截断展开式代入波动方程,得到单元质量矩阵、单元刚度矩阵和单元外力向量;d. Substitute the truncated expansion of the wave field, medium parameters and external force into the wave equation to obtain the element mass matrix, element stiffness matrix and element external force vector;
e.基于各单元的单元质量矩阵、单元刚度矩阵和单元外力向量,在主网格上求解弹性波方程。e. Based on the element mass matrix, element stiffness matrix and element external force vector of each element, the elastic wave equation is solved on the main grid.
优选地,利用预条件共轭梯度法求解弹性波方程。Preferably, the elastic wave equation is solved using a preconditioned conjugate gradient method.
进一步优选地,弹性波方程包括全局矩阵与全局向量的乘积;所述利用预条件共轭梯度法求解弹性波方程的步骤包括:计算单元矩阵,从全局向量中按全局节点与单元节点的对应关系取出单元向量;在单元上独立计算单元矩阵向量乘积,再将结果的单元向量按单元节点与全局节点的对应关系叠加,形成全局结果向量。Further preferably, the elastic wave equation includes the product of the global matrix and the global vector; the step of using the preconditioned conjugate gradient method to solve the elastic wave equation includes: calculating the element matrix, according to the corresponding relationship between the global node and the element node from the global vector Take out the unit vector; independently calculate the unit matrix-vector product on the unit, and then superimpose the resulting unit vector according to the corresponding relationship between the unit node and the global node to form a global result vector.
进一步优选地,将所有单元均分给P个CPU计算节点,所述利用预条件共轭梯度法求解弹性波方程的步骤包括:每个计算节点的进程独立读入该区域的介质参数,计算单元矩阵;通过叠加和传递子区域之间相邻单元共有节点上的向量值,获得全局向量在计算节点上分配的部分;在计算节点内部计算单元矩阵和向量积,得到单元结果向量;叠加和传递相邻单元共有节点上的结果向量值,得到全局结果向量在节点上分配的部分。Further preferably, all units are evenly distributed to P CPU computing nodes, and the step of using the preconditioned conjugate gradient method to solve the elastic wave equation includes: the process of each computing node independently reads in the medium parameters of the area, and the computing unit Matrix; by superimposing and transferring the vector values on the common nodes of adjacent units between sub-regions, the part of the global vector allocated on the calculation node is obtained; calculating the unit matrix and vector product inside the calculation node to obtain the unit result vector; superposition and transfer Neighboring cells share the value of the result vector on the node, and obtain the part of the global result vector allocated on the node.
优选的,基于各单元的单元质量矩阵、单元刚度矩阵和单元外力向量,在主网格上求解弹性波方程的步骤包括:在各进程中根据单元质量矩阵、单元刚度矩阵独立计算矩阵并取其对角线元素,作为单元预条件矩阵;各进程之间传递相邻单元共有节点对应的预条件矩阵元素值并叠加,用于更新单元预条件矩阵,从而形成全局预条件矩阵在各单元上的部分;各进程独立地初始化波场,开始时间迭代;各进程独立计算向量各进程之间传递相邻单元共有节点对应的bn元素值并叠加,用于更新bn,独立地存储于各CPU节点的内存中;用预条件共轭梯度法结合逐元技术,迭代求解方程组得到波场增量δun;各进程独立地用上一步求解得到的波场增量δun更新波场及其导数;判断时间迭代是否结束,若未结束则返回计算向量bn的步骤继续迭代。Preferably, based on the element mass matrix, element stiffness matrix and element external force vector of each element, the step of solving the elastic wave equation on the main grid includes: independently calculating the matrix according to the element mass matrix and element stiffness matrix in each process And take its diagonal elements as the unit preconditioning matrix; each process transmits and superimposes the element values of the preconditioning matrix corresponding to the common nodes of adjacent units to update the unit preconditioning matrix, thereby forming a global preconditioning matrix in each The part on the unit; each process independently initializes the wave field and starts time iteration; each process independently calculates the vector Each process transmits and superimposes b n element values corresponding to the common nodes of adjacent units, which are used to update b n and are stored independently in the memory of each CPU node; use preconditioned conjugate gradient method combined with element-by-element technology to iteratively solve equation set Obtain the wave field increment δu n ; each process independently uses the wave field increment δu n obtained from the previous step to update the wave field and its derivative; judge whether the time iteration is over, if not, return to the step of calculating the vector b n to continue the iteration .
进一步优选地,用预条件共轭梯度法结合逐元技术的步骤包括:各进程独立初始化解,计算残余向量;各进程传递相邻单元共有节点对应的残余向量值并叠加,得到更新的残余向量;各进程独立计算矩阵向量乘积,用并行算法计算向量内积;各进程传递相邻单元共有节点上的向量值并叠加,得到更新的矩阵向量乘积;更新解和残余向量。Further preferably, the step of using the preconditioned conjugate gradient method combined with the element-by-element technique includes: each process independently initializes the solution and calculates the residual vector; each process transmits the residual vector values corresponding to the common nodes of adjacent units and superimposes to obtain an updated residual vector ; Each process independently calculates the matrix-vector product, and uses a parallel algorithm to calculate the vector inner product; each process transmits and superimposes the vector values on the common nodes of adjacent units to obtain an updated matrix-vector product; updates the solution and the residual vector.
优选地,每个单元内部可含有多种介质。Preferably, each unit may contain multiple media inside.
本发明实施例由于采用多网格技术,单元划分简单,避免了传统方法中复杂小单元的划分,在单元内可以采用最合适的辅助网格和插值基函数来描述介质的变化,而波场在较稀疏的主网格上求解,减小计算规模,节省计算资源。同时,利用逐元技术,可以成千倍地缩减存贮空间和计算量,并利用并行方法达到较高并行效率。Because the embodiment of the present invention adopts the multi-grid technology, the unit division is simple, and the division of complex small units in the traditional method is avoided. The most suitable auxiliary grid and interpolation basis function can be used in the unit to describe the change of the medium, and the wave field Solving on the sparse main grid reduces the calculation scale and saves computing resources. At the same time, by using element-by-element technology, the storage space and calculation amount can be reduced by thousands of times, and the parallel method can be used to achieve higher parallel efficiency.
附图说明Description of drawings
图1是多网格Chebyshev并行谱元法流程图;Figure 1 is a flow chart of the multi-grid Chebyshev parallel spectral element method;
图2是预条件共轭梯度法子程序流程图。Figure 2 is a flow chart of the subroutine of the preconditioned conjugate gradient method.
具体实施方式Detailed ways
下面结合附图和具体实施例对本发明进行详细、清楚、完整的说明。显然,所描述的实施例仅仅是本发明一部分实施例,而不是全部的实施例。基于本发明中的实施例,本领域普通技术人员在没有作出创造性劳动前提下所获得的所有其它实施例,都属于本发明保护的范围。The present invention will be described in detail, clearly and completely below in conjunction with the accompanying drawings and specific embodiments. Apparently, the described embodiments are only some of the embodiments of the present invention, but not all of them. Based on the embodiments of the present invention, all other embodiments obtained by persons of ordinary skill in the art without creative efforts fall within the protection scope of the present invention.
针对传统谱元法每个单元内只能存在单一均匀介质,进行具有多尺度结构复杂介质中的弹性波模拟时,需要划分大量不规则小单元,耗费大量的存贮空间和计算时间的缺陷,本发明提出一种多网格Chebyshev并行谱元法,将计算区域划分为比较大而规则的不重叠单元,在单元内部用精细网格描述介质变化,而采用较大的规则单元进行迭代计算,大大降低对内存和计算资源的需求。利用Chebyshev谱元法具有解析精度的刚度矩阵和质量矩阵的特点以及多网格方法在网格划分上的并行优势,同时引入逐元技术实现高效率的并行化,进一步缩减了存贮空间和计算量,实现高效高精度的弹性波模拟,为地球物理,工程地震学,计算声学等领域的大规模高性能计算服务。For the traditional spectral element method, there can only be a single homogeneous medium in each unit. When performing elastic wave simulation in complex media with multi-scale structures, it is necessary to divide a large number of irregular small units, which consumes a lot of storage space and calculation time. The present invention proposes a multi-grid Chebyshev parallel spectral element method, which divides the calculation area into relatively large and regular non-overlapping units, uses fine grids to describe medium changes inside the units, and uses larger regular units for iterative calculations. Greatly reduces memory and computing resource requirements. Using Chebyshev spectral element method has the characteristics of stiffness matrix and mass matrix with analytical precision and the parallel advantages of multi-grid method in grid division, and introduces element-by-element technology to achieve high-efficiency parallelization, further reducing storage space and calculation It can realize efficient and high-precision elastic wave simulation, and serve large-scale high-performance computing in geophysics, engineering seismology, computational acoustics and other fields.
(1)多网格Chebyshev谱元法单元剖分和多网格划分技术方案(1) Multi-grid Chebyshev spectral element method element subdivision and multi-grid division technical scheme
首先将计算区域划分为比较大而规则的不重叠单元。对于任意单元,在单元局部坐标和参考单元间存在一个可逆的转换函数,通过这个变换完成实际物理区域和参考单元之间的转换。所有单元的计算可以统一在参考单元上实施。单元可选取规则形状,如二维可选用正方形单元,三维可用正立方体单元,此方法一方面避免传统方法中复杂单元的划分,节省计算时间,另一方面实际单元与参考单元的转换函数也较简单,求解单元矩阵时可降低计算量。Firstly, the computing area is divided into relatively large and regular non-overlapping units. For any unit, there is a reversible conversion function between the local coordinates of the unit and the reference unit, and the conversion between the actual physical area and the reference unit is completed through this transformation. The calculation of all units can be carried out on the reference unit uniformly. The unit can choose regular shape, such as square unit can be used for two-dimensional, and cube unit can be used for three-dimensional. On the one hand, this method avoids the division of complex units in the traditional method and saves calculation time. Simple, it can reduce the amount of calculation when solving the unit matrix.
随后,为了分别描述波场、介质和外力在单元内的不同分布,可以在参考单元内定义几组互相独立的网格。其中,用于描述和离散化声场的网格称为主网格,它采用Gauss-Lobatto-Chebyshev(GLC)配置点,利用Chebyshev-Lagrange插值基函数对单元内的波场作截断展开(例如二维单元内波场可展开为Subsequently, in order to describe the different distributions of the wave field, medium and external force in the unit, several sets of independent grids can be defined in the reference unit. Among them, the grid used to describe and discretize the sound field is called the main grid, which uses Gauss-Lobatto-Chebyshev (GLC) configuration points, and uses the Chebyshev-Lagrange interpolation basis function to truncate and expand the wave field in the unit (for example, two The wave field in the dimensional unit can be expanded as
其中,为单元内各配置点上的波场值,为Chebyshev-Lagrange插值基函数)。in, is the wave field value at each configuration point in the unit, interpolation basis functions for Chebyshev-Lagrange).
而用于描述介质参数的网格称为辅助网格。根据介质的分布和变化情况,可以选择最合适的辅助网格类型、辅助插值函数和阶数来精确描述介质在单元内的分布,(例如二维单元内介质参数可展开为The grid used to describe the medium parameters is called the auxiliary grid. According to the distribution and change of the medium, the most suitable auxiliary grid type, auxiliary interpolation function and order can be selected to accurately describe the distribution of the medium in the unit, (for example, the medium parameters in a two-dimensional unit can be expanded as
其中为单元内辅助网格配置点上的介质参数值,φl(ξ)为定义于辅助网格上的插值函数)。比如,若介质在单元内连续变化,可以采用与主网格类似的GLC点作为辅助网格节点,但其阶数L不必与主网格阶数N相同。而若介质在单元内发生不连续的跳变,介质参数用阶梯函数来描述,可以采用均匀分布的配置点作为辅助网格节点,以单位方波脉冲函数作为插值基函数,阶数根据介质变化情况选择,若介质变化尺度小则可取较高阶数。一般情况下,需计算的介质分布是不均匀不规则的,因此需要利用辅助网格将单元内的介质参数作截断展开。in is the medium parameter value on the auxiliary grid configuration point in the cell, φ l (ξ) is the interpolation function defined on the auxiliary grid). For example, if the medium changes continuously in the unit, GLC points similar to the main grid can be used as auxiliary grid nodes, but its order L does not have to be the same as the main grid order N. If the medium has a discontinuous jump in the unit, the medium parameters are described by a step function, and uniformly distributed configuration points can be used as auxiliary grid nodes, and the unit square wave pulse function is used as the interpolation basis function, and the order changes according to the medium The case selection, if the medium change scale is small, a higher order can be taken. In general, the distribution of the medium to be calculated is uneven and irregular, so it is necessary to use the auxiliary grid to truncate and expand the medium parameters in the unit.
当需要在单元内部精细描述外力的空间分布时,也可以用一组辅助网格,将单元内外力随空间变化的部分作类似的截断展开。When it is necessary to describe the spatial distribution of the external force within the unit, a set of auxiliary grids can also be used to truncate and expand the part of the internal and external forces of the unit that varies with space.
声波方程按谱元法的常规方法转化为弱形式:The acoustic wave equation is transformed into a weak form according to the conventional method of the spectral element method:
其中
(w,f)Ω=∫ΩwfdΩ(w,f) Ω = ∫ Ω wfdΩ
将三个展开式(1)、(2)、(3)代入弱形式方程中,经推导得到以矩阵形式表示的二阶线性常微分方程组:Substituting the three expansions (1), (2), and (3) into the weak form equation, the second-order linear ordinary differential equations expressed in matrix form are obtained after derivation:
Mü(t)+Ku(t)=F(t) (5)Mü(t)+Ku(t)=F(t) (5)
实际中计算得到单元质量矩阵Me、单元刚度矩阵Ke和单元负载向量Fe,用于后续的方程组求解。这一步计算完成后将不再用到辅助网格。In practice, the element mass matrix M e , the element stiffness matrix K e and the element load vector F e are calculated, which are used to solve the subsequent equations. The auxiliary grid will no longer be used after this step of calculation is completed.
与辅助网格相关的矩阵和向量可以释放内存。这些单元矩阵和向量的阶数由主网格阶数决定。The matrices and vectors associated with the helper grid can free up memory. The order of these element matrices and vectors is determined by the main grid order.
只需在主网格上迭代求解方程组,主要的计算规模也只取决于主网格的阶数。当介质结构复杂、变化尺度小时,可以通过增加辅助网格阶数来精确描述介质变化,主网格仍保持较为稀疏,因此与传统方法相比可以显著减小计算规模,达到节省计算中内存和CPU需求的目的。It only needs to iteratively solve the equations on the main grid, and the main calculation scale only depends on the order of the main grid. When the medium structure is complex and the change scale is small, the medium change can be accurately described by increasing the order of the auxiliary grid, and the main grid is still relatively sparse. Therefore, compared with the traditional method, the calculation scale can be significantly reduced, and the memory and memory in the calculation can be saved. Purpose of CPU demand.
(2)逐元技术在Chebyshev谱元法中应用的技术方案(2) The technical scheme of element-by-element technology applied in the Chebyshev spectral element method
基于Chebyshev展开的谱元法用预条件共轭梯度法迭代求解。The spectral element method based on Chebyshev expansion is solved iteratively by the preconditioned conjugate gradient method.
谱元法的二阶线性常微分方程组可用时间积分和预条件共轭梯度算法迭代求解。一种时间积分算法的步骤示例如下:The second-order linear ordinary differential equations of spectral element method can be solved iteratively by time integration and preconditioned conjugate gradient algorithm. An example of the steps of a time integration algorithm is as follows:
初始化:
向下一时刻迭代:Iterate to the next moment:
n=n+1n=n+1
由
更新解,循环迭代直至完成:Update the solution, looping iteratively until complete:
un+1=un+δun u n+1 =u n +δu n
在以上的迭代求解过程中,需反复计算将其写作Sx=b,此方程用预条件共轭梯度法求解的一种算法步骤示例为:In the above iterative solution process, it is necessary to repeatedly calculate Written as Sx=b, an example algorithmic step for solving this equation using the preconditioned conjugate gradient method is:
初始化:k=0,r0=b0-Sx0,p0=z0=Q-1r0,其中x0为初始解,Q为预条件矩阵。为了达到快速收敛的效果,此处可采用对角预条件矩阵,即选取矩阵S的对角线元素,其他元素取零,作为预条件矩阵。Initialization: k=0,r 0 =b 0 -Sx 0 ,p 0 =z 0 =Q -1 r 0 , where x 0 is the initial solution, and Q is the preconditioning matrix. In order to achieve a fast convergence effect, a diagonal preconditioning matrix can be used here, that is, the diagonal elements of the matrix S are selected, and other elements are set to zero as the preconditioning matrix.
迭代,更新解和残余向量:Iterate, updating the solution and residual vectors:
收敛性检查:若||rk+1||<ε||b||则迭代终止,Convergence check: If ||r k+1 ||<ε||b||, the iteration terminates,
若不收敛,更新共轭梯度搜索方向:If not converged, update the conjugate gradient search direction:
在求解过程中需计算全局矩阵与全局向量的乘积Spk,而由于谱元法的全局矩阵是单元矩阵按全局节点编号与单元节点编号的对应关系聚合而成的,因此从单元的观点来看,Spk的结果全局向量可以通过一系列单元层次的计算得到,如下式:In the process of solving, it is necessary to calculate the product Sp k of the global matrix and the global vector, and since the global matrix of the spectral element method is aggregated from the unit matrix according to the corresponding relationship between the global node number and the unit node number, from the point of view of the unit , the resulting global vector of Sp k can be obtained through a series of unit-level calculations, as follows:
其中,和分别为构成全局矩阵和全局向量的单元矩阵和向量,而代表聚合。in, and are unit matrices and vectors constituting the global matrix and global vector, respectively, and Represents aggregation.
在上述公式中,全局的矩阵向量乘积是在局部单元上完成的。In the above formulation, the global matrix-vector product is performed on local units.
具体步骤如下:Specific steps are as follows:
a.首先,计算单元矩阵,而单元向量通过全局节点编号和单元节点编号的对应关系,从全局向量pk扩散得到;a. First, calculate the unit matrix, and the unit vector Through the corresponding relationship between the global node number and the unit node number, it is obtained from the global vector p k diffusion;
b.然后,在局部单元上计算单元矩阵向量积,得到局部单元结果向量
c.最后,局部的单元结果向量再通过全局节点编号和单元节点编号的对应关系聚合成全局结果向量。这样,不需要生成全局矩阵S就得到了所需要计算的全局向量。c. Finally, the local cell result vector Then the global result vector is aggregated through the corresponding relationship between the global node number and the unit node number. In this way, the global vector to be calculated can be obtained without generating the global matrix S.
因此,在程序中没有必要集成并存贮全局矩阵,而只需计算并存贮单元矩阵。而单元矩阵是稠密的,这就极大地缩减了内存需求和提高了计算效率。Therefore, it is not necessary to integrate and store the global matrix in the program, but only need to calculate and store the unit matrix. The cell matrix is dense, which greatly reduces memory requirements and improves computational efficiency.
(3)基于多网格和逐元技术的并行化方案(3) Parallelization scheme based on multi-grid and element-by-element technology
由于采用多网格技术,谱元法单元形状规则,易于并行算法的分块处理,而且各并行子区域很容易获得负载平衡。同时,由于采用了逐元技术,在基于Chebyshev展开的谱元法程序中,绝大部分的工作可以局限在局部单元上实施,并可通过聚合和扩散完成整个计算。因此,采用多网格与逐元技术的谱元程序从结构上就具有优良的并行效率,具备大规模并行计算的特殊基础。Due to the use of multi-grid technology, the shape of the spectral element method unit is regular, which is easy to block processing in parallel algorithms, and it is easy to obtain load balance for each parallel sub-region. At the same time, due to the use of element-by-element technology, in the Chebyshev-based spectral element method program, most of the work can be limited to local elements, and the entire calculation can be completed through aggregation and diffusion. Therefore, the spectral element program using multi-grid and element-by-element technology has excellent parallel efficiency in structure, and has a special basis for large-scale parallel computing.
假定在拥有P个计算节点的并行集群计算机系统上进行弹性波传播模拟计算,并采用MPI(消息传递接口)作为并行计算开发环境。进行单元划分后,整个计算模型具有Ne个谱元单元,将它们均分给P个CPU进程,各个进程独立读入其对应子区域内的介质参数,利用多网格法独立计算单元的质量矩阵和单元刚度矩阵,并存储在该CPU节点的存储器中。如此在谱元法的空间离散阶段,通过CPU节点的任务分配,达到了内存均衡和计算均衡的目的,并且在此过程中节点之间不需交换数据,可达到高效率的并行。It is assumed that elastic wave propagation simulation calculations are performed on a parallel cluster computer system with P computing nodes, and MPI (message passing interface) is used as a parallel computing development environment. After unit division, the entire calculation model has N e spectral unit units, which are equally distributed to P CPU processes, and each process independently reads the medium parameters in its corresponding sub-area, and uses the multi-grid method to independently calculate the quality of the unit matrix and element stiffness matrix and are stored in the CPU node's memory. In this way, in the space discrete stage of the spectral element method, through the task allocation of CPU nodes, the purpose of memory balance and calculation balance is achieved, and during this process, no data exchange is required between nodes, and high-efficiency parallelism can be achieved.
Chebyshev谱元法形成的方程组要用预条件共轭梯度法求解,其中预条件矩阵为全局矩阵对角线形成的矩阵。实际操作中无需形成全局矩阵,只要将各进程负责的子域之间相邻单元共有节点上的矩阵元素值叠加,再传递给各进程,用于更新单元矩阵对角线的对应元素值即可。这样可以避免大量的数据传递,提高并行效率。The equations formed by the Chebyshev spectral element method are solved by the preconditioned conjugate gradient method, where the preconditioned matrix is the matrix formed by the diagonals of the global matrix. In actual operation, there is no need to form a global matrix, as long as the matrix element values on the common nodes of adjacent units between the sub-domains responsible for each process are superimposed, and then passed to each process to update the corresponding element values of the diagonal of the unit matrix. . This can avoid a large amount of data transfer and improve parallel efficiency.
弹性波传播模拟中大量的计算存在于时间离散中的迭代计算中。在时间迭代的每一步,需用预条件共轭梯度法迭代求解方程组。由于采用了逐元技术,可将其中的全局矩阵和向量积转化为单元矩阵和向量积,其主要计算步骤如下:A large number of calculations in elastic wave propagation simulations exist in iterative calculations in time discretization. At each step of the time iteration, the system of equations is iteratively solved using the preconditioned conjugate gradient method. Due to the use of element-by-element technology, the global matrix and vector product can be converted into unit matrix and vector product. The main calculation steps are as follows:
a.通过叠加和传递子区域之间相邻单元共有节点上的向量值,获得全局向量在节点上分配的部分;a. Obtain the part of the global vector allocated on the node by superimposing and transferring the vector value on the common node of the adjacent units between the sub-regions;
b.在计算节点内部计算单元矩阵和向量积,得到单元结果向量,其中向量为上一步所得,而单元矩阵在迭代计算中保持不变;b. Calculate the unit matrix and vector product inside the computing node to obtain the unit result vector, where the vector is obtained in the previous step, and the unit matrix remains unchanged in the iterative calculation;
c.叠加和传递相邻单元共有节点上的结果向量值,得到全局结果向量在节点上分配的部分,用于更新解和残余向量,进入下一次迭代。c. Superimpose and transfer the result vector values on the common nodes of adjacent units to obtain the part of the global result vector allocated on the nodes, which is used to update the solution and residual vector, and enter the next iteration.
下面以一个二维弹性波模拟为例,具体说明多网格Chebyshev并行谱元法的实施方式。其中介质参数在空间小尺度上发生不连续跳变,假定在并行集群计算机系统上用P个CPU计算节点进行弹性波传播模拟计算,并采用MPI(消息传递接口)作为并行计算开发环境。Taking a two-dimensional elastic wave simulation as an example, the implementation of the multi-grid Chebyshev parallel spectral element method is described in detail below. Among them, the medium parameters have discontinuous jumps on a small spatial scale. It is assumed that P CPU computing nodes are used for elastic wave propagation simulation calculations on a parallel cluster computer system, and MPI (message passing interface) is used as a parallel computing development environment.
图1是多网格Chebyshev并行谱元法流程图。如图1所示,具体实施过程有以下步骤:Figure 1 is a flowchart of the multi-grid Chebyshev parallel spectral element method. As shown in Figure 1, the specific implementation process has the following steps:
(1)计算区域划分为Ne×Ne个互不重叠的四边形单元。可以将这些单元均分给P个CPU计算节点,各进程独立读入其对应子区域内的介质参数,并确定主网格、辅助网格的阶数、配置点位置等参数。(1) The calculation area is divided into N e ×N e non-overlapping quadrilateral units. These units can be evenly distributed to P CPU computing nodes, and each process independently reads the media parameters in its corresponding sub-area, and determines the parameters such as the order of the main grid and the auxiliary grid, and the location of the configuration point.
主网格阶数N根据计算的精度和时间需求等选定,用于描述介质的辅助网格阶数L和配置点位置根据介质分布情况选择,用于描述外力的辅助网格阶数K和配置点根据外力分布情况选择。质量矩阵、刚度矩阵的计算中需用到N和L,以及读入的介质参数,外力向量的计算中需用于N和K。The main grid order N is selected according to the calculation accuracy and time requirements, and the auxiliary grid order L and configuration point positions used to describe the medium are selected according to the distribution of the medium. The auxiliary grid order K and The configuration points are selected according to the distribution of external forces. N and L are used in the calculation of the mass matrix and stiffness matrix, as well as the read-in medium parameters, and N and K are required in the calculation of the external force vector.
(2)各进程独立用多网格方法计算单元质量矩阵、单元刚度矩阵和单元外力向量。(2) Each process independently uses the multi-grid method to calculate the element mass matrix, element stiffness matrix and element external force vector.
二维弹性波模拟的计算公式如下:The calculation formula of 2D elastic wave simulation is as follows:
其中in
以及as well as
其中,单元质量矩阵Me,单元刚度矩阵Ke,单元外力向量Fe。ρ为介质密度,λ,μ为介质的拉梅系数,脚标l1l2表示在单元内辅助网格坐标。为主网格截断展开的Chebyshev插值多项式,φ(ξ)为介质辅助网格上展开的插值多项式,ψ(ξ)为外力辅助网格上展开的插值多项式。Among them, element mass matrix M e , element stiffness matrix K e , and element external force vector F e . ρ is the density of the medium, λ, μ are the Lame coefficients of the medium, and the subscripts l 1 l 2 represent the coordinates of the auxiliary grid in the unit. The Chebyshev interpolation polynomial expanded by truncating the main grid, φ(ξ) is the interpolation polynomial expanded on the medium auxiliary grid, and ψ(ξ) is the interpolated polynomial expanded on the external force auxiliary grid.
(3)在各进程中独立计算矩阵并取其对角线元素,以向量方式存储,作为单元预条件矩阵。标号e表示单元上的局部矩阵或向量。对角预条件矩阵,这是预条件共轭梯度法求解中的一种预条件矩阵选取方法,可以达到快速收敛的效果,并且对角矩阵可以以向量形式存储,减少内存占用,提高计算效率。(3) Calculate the matrix independently in each process And take its diagonal elements, store them as vectors, and use them as unit preconditioning matrices. The reference e denotes a local matrix or vector on the unit. Diagonal preconditioning matrix, which is a preconditioning matrix selection method in the preconditioning conjugate gradient method, can achieve fast convergence, and the diagonal matrix can be stored in the form of vectors, reducing memory usage and improving computing efficiency.
(4)各进程之间传递相邻单元共有节点对应的预条件矩阵元素值并叠加,用于更新单元预条件矩阵,从而形成全局预条件矩阵在各单元上的部分,独立地存储于各CPU节点的内存中。(4) The preconditioning matrix element values corresponding to the common nodes of adjacent units are transferred between each process and superimposed to update the unit preconditioning matrix, thereby forming the part of the global preconditioning matrix on each unit, which is independently stored in each CPU in the node's memory.
(5)各进程独立地初始化波场,开始时间迭代。(5) Each process independently initializes the wave field and starts time iteration.
(6)各进程独立计算向量
(7)各进程之间传递相邻单元共有节点对应的bn元素值并叠加,用于更新bn,独立地存储于各CPU节点的内存中。(7) The b n element values corresponding to the shared nodes of adjacent units are transferred among the processes and superimposed for updating b n , which are independently stored in the memory of each CPU node.
(8)用预条件共轭梯度法结合逐元技术,迭代求解方程组
(9)各进程独立地用上一步求解得到的波场增量δun更新波场及其导数。(9) Each process independently updates the wave field and its derivatives with the wave field increment δu n obtained from the previous step.
(10)判断时间迭代是否结束,若未结束则返回步骤(6)继续迭代。(10) Determine whether the time iteration is over, if not, return to step (6) to continue the iteration.
(11)各进程独立将结果写入文件保存。(11) Each process independently writes the result to a file for storage.
图2是预条件共轭梯度法子程序流程图。如图2所示,此过程包含如下子步骤:Figure 2 is a flow chart of the subroutine of the preconditioned conjugate gradient method. As shown in Figure 2, this process includes the following sub-steps:
a.各进程独立初始化解,计算残余向量。a. Each process independently initializes the solution and calculates the residual vector.
b.各进程传递相邻单元共有节点对应的残余向量值并叠加,得到更新的残余向量。b. Each process transmits the residual vector values corresponding to the common nodes of adjacent units and superimposes them to obtain an updated residual vector.
c.各进程独立计算矩阵向量乘积,用并行算法计算向量内积。c. Each process independently calculates the matrix-vector product, and uses a parallel algorithm to calculate the vector inner product.
d.各进程传递相邻单元共有节点上的向量值并叠加,得到更新的矩阵向量乘积。d. Each process transmits and superimposes the vector values on the common nodes of adjacent units to obtain an updated matrix-vector product.
e.更新解和残余向量。e. Update the solution and residual vectors.
判断是否达到收敛条件,若不收敛则返回步骤c循环迭代。Judging whether the convergence condition is reached, if not, return to step c for loop iteration.
本发明实施例由于采用多网格技术,单元划分简单,避免了传统方法中复杂小单元的划分,在单元内可以采用最合适的辅助网格和插值基函数来描述介质的变化,而波场在较稀疏的主网格上求解,减小计算规模,节省计算资源。同时,利用逐元技术,可以成千倍地缩减存贮空间和计算量,并利用并行方法达到较高并行效率。Because the embodiment of the present invention adopts the multi-grid technology, the unit division is simple, and the division of complex small units in the traditional method is avoided. The most suitable auxiliary grid and interpolation basis function can be used in the unit to describe the change of the medium, and the wave field Solving on the sparse main grid reduces the calculation scale and saves computing resources. At the same time, by using element-by-element technology, the storage space and calculation amount can be reduced by thousands of times, and the parallel method can be used to achieve higher parallel efficiency.
以一个边长为L二维正方形计算区域Ω为例,其中传播的弹性波最小波长为λmin,同时介质中具有尺度为1/10λmin的非均匀分布。Take a two-dimensional square calculation area Ω with side length L as an example, in which the minimum wavelength of the propagating elastic wave is λ min , and the medium has a non-uniform distribution with a scale of 1/10λ min .
用传统谱元法计算,必须按介质非均匀的尺度划分单元,将计算区域Ω划分为Ne×Ne个互不重叠的四边形单元,单元边长为1/10λmin,单元Chebyshev展开取N阶,则总的计算节点数为(NeN+1)×(NeN+1),全局矩阵的大小为Sg=(2×(NeN+1)×(NeN+1))2。用计算负荷最大的全局矩阵向量乘积衡量计算需求,并只关注其中耗时相对较大的乘法运算,传统谱元法中需进行的乘法运算总次数为Tg=(2×(NeN+1)×(NeN+1))2。To calculate with the traditional spectral element method, the unit must be divided according to the non-uniform scale of the medium, and the calculation area Ω is divided into N e ×N e non-overlapping quadrilateral units, the unit side length is 1/10λ min , and the unit Chebyshev expansion takes N order, the total number of computing nodes is (N e N+1)×(N e N+1), and the size of the global matrix is S g =(2×(N e N+1)×(N e N+1 )) 2 . The global matrix-vector product with the largest calculation load is used to measure the calculation requirements, and only focus on the relatively time-consuming multiplication operation. The total number of multiplication operations required in the traditional spectral element method is T g =(2×(N e N+ 1)×(N e N+1)) 2 .
而用多网格Chebyshev并行谱元法计算,可以采用较大的单元,通常单元尺寸可大于所传播弹性波的最小波长λmin。此处若取λmin作为单元边长,则计算区域划分为(Ne/10)×(Ne/10)个单元,单元上Chebyshev展开仍取N阶,则单元矩阵大小为由于采用逐元技术,无需形成全局矩阵,则存储单元矩阵的内存需求为However, with the multi-grid Chebyshev parallel spectral element method, larger elements can be used, usually the element size can be larger than the minimum wavelength λ min of the propagating elastic wave. Here, if λ min is taken as the unit side length, the calculation area is divided into (N e /10)×(N e /10) units, and the Chebyshev expansion on the unit is still taken as N order, then the size of the unit matrix is Due to the use of element-by-element technology, there is no need to form a global matrix, and the memory requirement of the storage cell matrix is
Se=(Ne/10)×(Ne/10)×(2×(N+1)×(N+1))2。在计算需求上,利用逐元技术将全局矩阵向量相乘转化为(Ne/10)×(Ne/10)次单元矩阵向量相乘,则所需总的乘法运算次数为Te=(Ne/10)×(Ne/10)×(2×(N+1)×(N+1))2。S e =(N e /10)×(N e /10)×(2×(N+1)×(N+1)) 2 . In terms of computing requirements, the global matrix-vector multiplication is transformed into (N e /10)×(N e /10) unit matrix-vector multiplications by element-by-element technology, and the total number of multiplication operations required is T e =( N e /10)×(N e /10)×(2×(N+1)×(N+1)) 2 .
用矩阵规模衡量两种方式的内存需求:Use the matrix size to measure the memory requirements of the two methods:
用矩阵向量乘积中乘法运算次数衡量两种方式的计算量:The calculation amount of the two methods is measured by the number of multiplication operations in the matrix-vector product:
若取Ne=100,N=6,则也就是说,通过采用多网格和逐元技术,内存需求和计算需求都至少降低了50万倍。If N e =100, N=6, then That is to say, by adopting multi-grid and element-by-element techniques, both memory requirements and computing requirements are reduced by at least 500,000 times.
此外,采用MPI并行开发环境时,决定并行效率的主要因素为负载平衡性和CPU节点之间传递的数据量,而多网格Chebyshev并行谱元法负载均衡,需传递的数据量小,能够达到90%以上的并行效率。In addition, when using the MPI parallel development environment, the main factors determining the parallel efficiency are load balance and the amount of data transferred between CPU nodes, while the multi-grid Chebyshev parallel spectrum element method load balances, the amount of data to be transferred is small, and can reach More than 90% parallel efficiency.
以上所述的具体实施方式,对本发明的目的、技术方案和有益效果进行了进一步详细说明,所应理解的是,以上所述仅为本发明的具体实施方式而已,并不用于限定本发明的保护范围,凡在本发明的精神和原则之内,所做的任何修改、等同替换、改进等,均应包含在本发明的保护范围之内。The specific embodiments described above have further described the purpose, technical solutions and beneficial effects of the present invention in detail. It should be understood that the above descriptions are only specific embodiments of the present invention and are not intended to limit the scope of the present invention. Protection scope, within the spirit and principles of the present invention, any modification, equivalent replacement, improvement, etc., shall be included in the protection scope of the present invention.
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