CN103529159A - Method for pretreating research sample in blood non-target metabonomics - Google Patents
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- 210000004369 blood Anatomy 0.000 title claims abstract description 39
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- 238000011160 research Methods 0.000 title abstract description 3
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 claims abstract description 59
- 230000004060 metabolic process Effects 0.000 claims abstract description 20
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims abstract description 16
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 claims abstract description 14
- 239000000126 substance Substances 0.000 claims abstract description 11
- 239000011259 mixed solution Substances 0.000 claims abstract description 8
- 229910052757 nitrogen Inorganic materials 0.000 claims abstract description 8
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- 102000004169 proteins and genes Human genes 0.000 claims abstract description 8
- 210000002966 serum Anatomy 0.000 claims abstract description 7
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 claims description 12
- 239000000284 extract Substances 0.000 claims description 12
- 210000002381 plasma Anatomy 0.000 claims description 12
- 239000007787 solid Substances 0.000 claims description 7
- 239000000463 material Substances 0.000 claims description 6
- 239000006228 supernatant Substances 0.000 claims description 6
- 238000001556 precipitation Methods 0.000 claims description 4
- 238000012545 processing Methods 0.000 claims description 4
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- OSWFIVFLDKOXQC-UHFFFAOYSA-N 4-(3-methoxyphenyl)aniline Chemical compound COC1=CC=CC(C=2C=CC(N)=CC=2)=C1 OSWFIVFLDKOXQC-UHFFFAOYSA-N 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
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Abstract
The invention discloses a method for pretreating a research sample in blood non-target metabonomics. Polar and non-polar substances in serum can be extracted at the same time by adopting the method. Compared with an existing common sample pretreatment method, the method has the advantages that the number of extracted metabolites is remarkably increased, protein precipitate is dissolved by acetonitrile and water mixed solution, residues dried by nitrogen is re-dissolved, so that the dissolubility of non-polar substance lysophosphatide can be reduced on the one hand, and the high mass spectrum matrix effect interference caused by high-concentration lysophosphatide can be reduced; on the other hand, the experiment operation steps are reduced, the experiment errors are reduced, and a sample treated by adopting the method can be detected by a UPLC-Q-TOF MSMS (ultra-high-performance liquid chromatography/quadrupole time-of-flight mass spectrometry) as an analysis platform to obtain more metabolites in blood. Therefore, changes of blood metabolism can be favorably observed comprehensively, more reliable differential metabolites or biomarkers can be discovered, metabolic changes and change mechanism of a body can be further observed and researched, and the development of blood non-target metabonomics can be promoted.
Description
Technical field
The present invention relates to the sample-pretreating method of the non-target metabolism group of a kind of new blood research, a kind of a kind of new method that can simultaneously extract the sample pre-treatments of blood Semi-polarity and nonpolar metabolic product that to relate in particular to the UPLC-Q-TOF of take MSMS be analysis platform.
Background technology
Non-target plasma metabolism group is comprehensively to investigate after living things system irriate or disturbance, utilize a series of technological means and detection method to characterize the dynamic change of metabolite concentration and kind in blood, the variation physiological and pathological corresponding with body of observing the metabolic pathway of body changes.In order clearly to understand the variation of human body integral metabolism, should detect as far as possible metabolic products all in body fluid, this just needs a kind of method to extract as far as possible all metabolic products in blood.Conventional blood sample pre-treating method mainly contains now: organic solvent extraction method, solid phase extraction and both mixing methods.The cardinal principle of these methods is the protein of removing in blood, and the metabolic product extracting in blood carries out LC-MS analyzing and testing.But the weak point of this several method is the part metabolic product extracting in blood, and organic solvent extraction method is mainly apolar substance (lipid), and solid phase extraction is removed the lysophosphatide of blood middle high concentration, and the polar material in blood is extracted seldom.Therefore current sample-pretreating method can not extract polarity and the nonpolar metabolic product in blood simultaneously, can not meet the demand of all metabolic products in metabolism group analyzing blood, also just can not be comprehensive and systematic observation the plasma metabolism concrete variation and the difference that change.
Summary of the invention
Technical matters to be solved by this invention is to overcome in prior art only to pay close attention to the apolar substance that extracts in blood or the shortcoming of polar material, provides a kind of and can extract polarity in blood and the new simple and quick sample-pretreating method of apolar substance simultaneously.
In order to achieve the above object, the technology used in the present invention means are:
The pre-treating method of the non-target metabolism group of a kind of blood of the present invention study sample, is characterized in that comprising the following steps:
(1) blood of-80 ℃ of preservations is taken out, 4 ℃ thaw after vortex 1-2 minute, get and mix blood plasma 250 microlitres in 2 milliliters of centrifuge tubes, add 750 microliter methanol, vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃;
(2) the supernatant solution of getting the centrifugal rear acquisition of step (1) is in another one 2ml centrifuge tube, and nitrogen dries up, and remaining solid residue is in order to again redissolving;
(3) lower floor's albumen precipitation of the centrifugal rear acquisition of step (1) is smashed to pieces, mixed solution 350 microlitres that add acetonitrile and water, after vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃, to remove the protein in blood plasma, and extract the polar material in serum and do not extract apolar substance completely;
(4) in the centrifuge tube after the supernatant after step (3) is centrifugal is poured nitrogen in step (2) into and dried up, the remaining solid residue redissolving in centrifuge tube, standing 5-10 minute after vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃;
(5) collect the supernatant that step (4) obtains after centrifugal, be the non-target metabolism group of the blood study sample after processing.
In the present invention, preferred, in acetonitrile and water mixed solution, the volume ratio of acetonitrile and water is 1:1.
According to the sample after method processing of the present invention, can be used as the study sample of non-target plasma metabolism group, enter ULPLC/Q-TOF MSMS and detect, and then obtain data.
Compared to prior art, the pre-treating method of the non-target metabolism group of a kind of blood of the present invention study sample has the following advantages:
1, adopt method of the present invention can extract polarity and the apolar substance in serum simultaneously, compare with now conventional sample-pretreating method, the metabolic product quantity showed increased of extraction, as shown in Figure 1;
2, by again extracting polarity and the residue apolar substance in precipitating proteins, guarantee to obtain the metabolic product of maximum quantity;
3, with acetonitrile and the first soluble protein sediment of water mixed solution (preferably the volume ratio of acetonitrile and water is 1:1), residue after the nitrogen that redissolves again dries up, reduced on the one hand the solubleness of apolar substance lysophosphatide, and then the high mass spectrum matrix effect that reduction high concentration lysophosphatide causes disturbs, reduce on the other hand experimental implementation step, reduced experimental error;
4, solution, repeatedly through high speed centrifugation, has been removed the impact of the large particulate matters such as protein on chromatographic column as much as possible, without membrane filtration, can directly carry out chromatographic resolution and detection;
5, adopt the sample after method of the present invention is processed the metabolic product in more blood can be detected, more be conducive to comprehensively observe the variation of plasma metabolism, find more reliable difference metabolic product or biomarker, can further observe and study metabolic alterations and the change mechanism of body, promote the progress of the non-target metabolism group of blood.
Accompanying drawing explanation
Fig. 1 is the base peak ion current chromatogram of serum sample.
A: extracting method of the present invention; B: present conventional sample-pretreating method.
Embodiment
Below in conjunction with specific embodiment, further describe the present invention, advantage and disadvantage of the present invention will be more clear along with description.But these embodiment are only exemplary, scope of the present invention are not formed to any restriction.It will be understood by those skilled in the art that lower without departing from the spirit and scope of the present invention and can the details of technical solution of the present invention and form be modified or be replaced, but these modifications and replacement all fall within the scope of protection of the present invention.
The pre-treatment of the non-target metabolism group of embodiment 1 blood study sample
According to following steps, carry out:
(1) blood of-80 ℃ of preservations is taken out, 4 ℃ thaw after vortex 2 minutes, get and mix blood plasma 250 microlitres in 2 milliliters of centrifuge tubes, add 750 microliter methanol, vortex 2 minutes, at 12000rpm4 ℃ centrifugal 10 minutes;
(2) the supernatant solution of getting the centrifugal rear acquisition of step (1) is in another one 2ml centrifuge tube, and nitrogen dries up, and remaining solid residue is in order to again redissolving;
(3) lower floor's albumen precipitation of the centrifugal rear acquisition of step (1) is smashed to pieces, mixed solution 350 microlitres that add acetonitrile and water, in acetonitrile and water mixed solution, the volume ratio of acetonitrile and water is 1:1, after vortex 2 minutes, at 12000rpm4 ℃ centrifugal 10 minutes, to remove the protein in blood plasma, and extract the polar material in serum and do not extract apolar substance completely;
(4) in the centrifuge tube after the supernatant after step (3) is centrifugal is poured nitrogen in step (2) into and dried up, the remaining solid residue redissolving in centrifuge tube, vortex after 2 minutes standing 10 minutes, at 12000rpm4 ℃ centrifugal 10 minutes;
(5) collect the supernatant that step (4) obtains after centrifugal, be the non-target metabolism group of the blood study sample after processing.
The Mass Spectrometer Method of sample after embodiment 2 pre-treatments
1, reagent
Acetonitrile, methyl alcohol (chromatographically pure), formic acid (chromatographically pure), ultrapure water is produced by pure water instrument.
2, chromatographic separation condition:
Liquid chromatography is the U.S. Acquity of Waters company Ultra Performance Liquid Chromatography system.Chromatographic column is (BEH) C18 post (1.8 μ m, 2.1 * 100mm).Liquid phase chromatogram condition: mobile phase A is distilled water (0.1% formic acid solution), Mobile phase B is acetonitrile, flow velocity is that 0.35mL/min. is with linear gradient elution, start gradient is 2% acetonitrile and maintains 0.5min, 0.5-1.5min acetonitrile 2%-20%, 1.5-6.0min acetonitrile 20%-70%, 6.0-10.0min acetonitrile 70%-98%, 10.0-12.0min acetonitrile 98% maintains 2min, and then in 2min, balance chromatographic column 2min falls back 2%, in ethane nitrile content.Each sample size is 2 μ L, 35 ℃ of column temperatures, and auto injection actuator temperature maintains 4 ℃.
3, Mass Spectrometer Method condition:
Mass spectrometer is the Micromass Q-TOF of Waters company series connection quadrupole rod-time of-flight mass spectrometer, is furnished with electric spray ion source (ESI).Mass spectrum detects with positive ion mode, and positive ion mode condition is: capillary voltage 3000V (negative ion mode, capillary voltage is 2800V); Taper hole voltage 35V; Potential energy 6eV; Desolventizing gas velocity 650L/h; Taper hole gas velocity 50L/h; 320 ℃ of desolventizing temperature; 110 ℃ of source temperatures.Use full scan pattern, mass range is 50 – 1000amu.With the Centroid pattern of Lock Spray, collect data and guarantee accuracy and reappearance; With the LEK of 200pg/ml concentration (fixing mass-to-charge ratio: positive ion 556.2771/ negative ion 554.2615) make single point correction, flow velocity 8 μ L/min.Lock spray frequency is 0.48s, and LEK on average scans and surpasses 10 times to proofread and correct.
4, sample: the blood sample after embodiment 1 method is processed
5, result
The base peak ion current chromatogram of serum sample, as shown in Figure 1, A: extracting method of the present invention; B: present conventional sample-pretreating method, concrete steps can be referring to document:
1.Comparative?Analysis?of?Sample?Preparation?Methods?To?Handle?the?Complexity?of?the?Blood?Fluid?Metabolome:When?Less?Is?More.Sara?Tulipani,Rafael?Llorach,Mireia?Urpi-Sarda,and?Cristina?Andres-Lacueva.Anal.Chem.2013,85,341-348;
2.UPLC-MS-Based?Analysis?of?Human?Plasma?for?Metabonomics?Using?Solvent?Precipitation?or?Solid?Phase?Extraction?Filippos?Michopoulos,Lindsay?Lai,Helen?Gika,Georgios?Theodoridis,and?Ian?Wilson.Journal?of?Proteome?Research2009,8,2114–2121。
From Fig. 1 result, can find out, adopt method of the present invention to process and extract polarity and the nonpolar metabolic product in blood simultaneously, the metabolic product quantity showed increased of extracting, chromatographic peak in figure A is than the chromatographic peak showed increased in figure B, particularly increased the quantity of polar material, the chromatographic peak before retention time 0.6-5 minute significantly increases and increases.Therefore, use blood sample pre-treating method of the present invention, the metabolic product in more blood can be detected, more be conducive to comprehensively observe the variation of plasma metabolism, find more reliable difference metabolic product or biomarker, can further observe and study metabolic alterations and the change mechanism of body, thereby promote the progress of the non-target metabolism group of blood.
Claims (2)
1. a pre-treating method for the non-target metabolism group of blood study sample, is characterized in that comprising the following steps:
(1) blood of-80 ℃ of preservations is taken out, 4 ℃ thaw after vortex 1-2 minute, get and mix blood plasma 250 microlitres in 2 milliliters of centrifuge tubes, add 750 microliter methanol, vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃;
(2) the supernatant solution of getting the centrifugal rear acquisition of step (1) is in another one 2ml centrifuge tube, and nitrogen dries up, and remaining solid residue is in order to again redissolving;
(3) lower floor's albumen precipitation of the centrifugal rear acquisition of step (1) is smashed to pieces, mixed solution 350 microlitres that add acetonitrile and water, after vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃, to remove the protein in blood plasma, and extract the polar material in serum and do not extract apolar substance completely;
(4) in the centrifuge tube after the supernatant after step (3) is centrifugal is poured nitrogen in step (2) into and dried up, the remaining solid residue redissolving in centrifuge tube, standing 5-10 minute after vortex 1-3 minute, centrifugal 10-15 minute at 12000rpm4 ℃;
(5) collect the supernatant that step (4) obtains after centrifugal, be the non-target metabolism group of the blood study sample after processing.
2. the pre-treating method of the non-target metabolism group of a kind of blood according to claim 1 study sample, is characterized in that: in acetonitrile and water mixed solution, the volume ratio of acetonitrile and water is 1:1.
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CN113156028A (en) * | 2021-04-30 | 2021-07-23 | 厦门市迈理奥科技有限公司 | Derivatization method of carbonyl metabolites and efficient non-targeted metabonomics analysis method |
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CN105424429A (en) * | 2015-11-04 | 2016-03-23 | 哈尔滨医科大学 | Sample pretreatment method for formalin fixation tissue non-target metabonomics research |
CN105424429B (en) * | 2015-11-04 | 2018-03-06 | 哈尔滨医科大学 | A kind of sample-pretreating method of the non-target metabolism group research of formalin-fixed tissue |
CN109425669A (en) * | 2017-09-01 | 2019-03-05 | 中国民用航空局民用航空医学中心 | A kind of method that liquid chromatography-mass spectrometry screens degree of fatigue associated biomarkers in human body fluid |
CN109425669B (en) * | 2017-09-01 | 2022-09-16 | 中国民用航空局民用航空医学中心 | Method for screening biomarkers related to fatigue degree in human body fluid by liquid chromatography-mass spectrometry |
CN112525631A (en) * | 2020-10-16 | 2021-03-19 | 华南农业大学 | Sample preparation method for non-targeted metabonomics and non-targeted lipidomics research of shrimp meat samples |
CN113156028A (en) * | 2021-04-30 | 2021-07-23 | 厦门市迈理奥科技有限公司 | Derivatization method of carbonyl metabolites and efficient non-targeted metabonomics analysis method |
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