CN103439296B - Based on the aptamer sensor construction method of the two amplifying technique of Au NPs and DNA circulation and the application in adenosine detects thereof - Google Patents
Based on the aptamer sensor construction method of the two amplifying technique of Au NPs and DNA circulation and the application in adenosine detects thereof Download PDFInfo
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Abstract
本发明公开了一种基于Au NPs和DNA循环双放大技术的适配体传感器构建及其在腺苷检测中的应用,属于适配体传感技术领域。该检测系统包含腺苷适配体、与适配体部分杂交的探针DNA、Au NPs标记的发夹结构DNA和组装在金片表面的发夹结构DNA。当没有腺苷时,Au NPs标记DNA保持发夹结构而不能与金片表面的发夹DNA杂交,无法将Au NPs捕获到金片表面。当存在腺苷时,腺苷与其适配体结合,探针DNA则从适配体/探针DNA双链中释放出来而与Au NPs标记的发夹DNA杂交使其开环,开环后的Au NPs标记DNA与金片表面的DNA杂交将Au NPs捕获到金片上,替换出来的探针DNA引发下一轮DNA链替换反应,如此循环,单个腺苷分子可引发大量Au NPs组装到金片上,获得增强的SPR信号,用于对腺苷的高灵敏检测。
The invention discloses the construction of an aptamer sensor based on Au NPs and DNA circulation double amplification technology and its application in adenosine detection, belonging to the technical field of aptamer sensing. The detection system consists of adenosine aptamer, probe DNA partially hybridized with the aptamer, Au NPs-labeled hairpin DNA and hairpin DNA assembled on the surface of the gold sheet. When there is no adenosine, the Au NPs-labeled DNA maintains the hairpin structure and cannot hybridize with the hairpin DNA on the surface of the gold sheet, and cannot capture the Au NPs on the surface of the gold sheet. When adenosine is present, adenosine binds to its aptamer, and the probe DNA is released from the aptamer/probe DNA duplex and hybridizes with the Au NPs-labeled hairpin DNA to open the loop. The Au NPs-labeled DNA hybridizes with the DNA on the surface of the gold sheet to capture the Au NPs on the gold sheet, and the replaced probe DNA triggers the next round of DNA strand replacement reaction. In this cycle, a single adenosine molecule can trigger a large number of Au NPs to assemble on the gold sheet , to obtain enhanced SPR signal for highly sensitive detection of adenosine.
Description
技术领域 technical field
本发明涉及一种基于Au NPs和DNA循环双放大技术的适配体传感器构建及其在腺苷检测中的应用,属于适配体传感技术领域。 The invention relates to the construction of an aptamer sensor based on Au NPs and DNA circulation double amplification technology and its application in adenosine detection, belonging to the technical field of aptamer sensing.
背景技术 Background technique
适配体是指经指数富集的配体系统进化技术体外筛选合成得到的一小段单链寡核昔酸序列,对目标分子具有高度亲和性和特异性的识别能力。与抗体为识别元件相比,适配体具有配体广泛、易合成、易标记、化学稳定性好等优势,被广泛应用于目标分子的识别与检测。迄今为止,已有各种以核酸适配体为识别元素的比色传感器、荧光传感器、电化学传感器、发光传感器、石英晶体微天平传感器、表面等离子体共振(SPR)传感器的报道。其中,基于SPR检测法的适配体传感器因无需标记、高灵敏及实时监测等优势而具有良好的应用前景。大部分SPR适配体传感器采用夹心检验法、目标引发构像改变或目标引发链替换与竞争相结合等原理实现对生物分子的检测。尽管这些传感器对目标分子的检测具有较高的选择性和灵敏度,但它们大多按1:1的信号:目标物比例输出信号,无法实现低浓度物质特别是小分子和核酸等的高灵敏检测。因此,发展高灵敏的SPR传感技术用于检测低浓度生物分子具有重要意义。 Aptamer refers to a small single-stranded oligonucleotide sequence synthesized by in vitro screening and synthesis by exponential enrichment ligand system evolution technology, which has high affinity and specificity recognition ability for target molecules. Compared with antibodies as recognition elements, aptamers have the advantages of wide range of ligands, easy synthesis, easy labeling, and good chemical stability, and are widely used in the recognition and detection of target molecules. So far, various colorimetric sensors, fluorescent sensors, electrochemical sensors, luminescent sensors, quartz crystal microbalance sensors, and surface plasmon resonance (SPR) sensors have been reported using nucleic acid aptamers as recognition elements. Among them, the aptasensor based on SPR detection method has good application prospects due to its advantages of no need for labeling, high sensitivity and real-time monitoring. Most SPR aptasensors use the principles of sandwich assay, target-triggered conformational change, or target-triggered strand replacement and competition to detect biomolecules. Although these sensors have high selectivity and sensitivity for the detection of target molecules, most of them output signals according to a 1:1 signal:target ratio, which cannot achieve high-sensitivity detection of low-concentration substances, especially small molecules and nucleic acids. Therefore, it is of great significance to develop highly sensitive SPR sensing technology for the detection of low concentration biomolecules.
近年来,核酸分子扩增技术被广泛用于提高适配体传感器的检测灵敏度,如,靶诱导替换聚合、滚环放大、聚合酶链反应、基于核酸内切酶的信号放大反应等。这些方法虽然提高了检测灵敏度,但它们往往需要用到蛋白酶,不仅增加了分析成本,还需要精确控制蛋白酶的反应条件,大大限制了应用。发展无酶放大方法用于生物分子的高灵敏检测尤为重要。基于杂交和链替换的无酶放大技术(如杂交链扩增反应、熵驱动催化、目标催化发夹组装),由于模式固有、易于扩展、无需使用蛋白酶等特点,具有广阔的应用前景。然而,迄今尚未见基于无酶放大技术的SPR适配体传感器用于小分子高灵敏检测的报道。 In recent years, nucleic acid molecular amplification technology has been widely used to improve the detection sensitivity of aptasensors, such as target-induced replacement polymerization, rolling circle amplification, polymerase chain reaction, endonuclease-based signal amplification reaction, etc. Although these methods improve the detection sensitivity, they often require the use of protease, which not only increases the analysis cost, but also requires precise control of the reaction conditions of the protease, which greatly limits the application. It is particularly important to develop enzyme-free amplification methods for highly sensitive detection of biomolecules. Enzyme-free amplification technologies based on hybridization and strand replacement (such as hybridization-strand amplification reactions, entropy-driven catalysis, and target-catalyzed hairpin assembly) have broad application prospects due to the inherent characteristics of the model, easy expansion, and no need for proteases. However, there have been no reports of SPR aptasensors based on enzyme-free amplification technology for high-sensitivity detection of small molecules.
发明内容 Contents of the invention
本发明的目的在于提供了一种基于Au NPs和DNA循环双放大技术的适配体传感器构建及其在腺苷检测中的应用,它具有检测灵敏和选择性好的优点。 The purpose of the present invention is to provide an aptamer sensor construction based on Au NPs and DNA cycle double amplification technology and its application in adenosine detection, which has the advantages of sensitive detection and good selectivity.
本发明是这样来实现的,在包含腺苷适配体、与适配体部分杂交的探针DNA(c-DNA1)、Au NPs标记的发夹结构DNA(Au-H-DNA1)、预组装在SPR金片上的巯基化发夹结构DNA(H-DNA2)的实验体系中,当没有目标分子腺苷存在时,Au-H-DNA1上的H-DNA1保持发夹结构而不能与预组装在金片表面的发夹结构H-DNA2杂交,无法将Au NPs捕获到金片表面。然而,当存在目标分子腺苷时,腺苷与适配体特异性结合促使适配体发生折叠而构象改变,使得c-DNA1从适配体/c-DNA1双链中释放出来与Au-H-DNA1杂交使其开环,开环后的Au-H-DNA1与预组装在金片表面的H-DNA2杂交将Au NPs捕获到金片上,同时替换出c-DNA1,替换出来的c-DNA1则引发下一轮DNA链替换循环。通过如此DNA链替换循环,单个腺苷分子则可引发大量Au-H-DNA1组装在SPR金片上。Au NPs对SPR信号的放大效应,使得SPR测量信号大大增强,对腺苷的检测限低至pM级别。同时,适配体的高特异性,使得传感器具有良好的抗干扰能力。本发明基于Au NPs对SPR信号耦合放大效应和目标物引发DNA链替换循环双重放大策略构建的SPR适配体传感器,为低浓度生物小分子的高灵敏和选择性检测提供了普适性平台,具有良好的应用前景。 The present invention is realized in this way, in the adenosine aptamer, the probe DNA (c-DNA1) hybridized with the aptamer part, the hairpin structure DNA (Au-H-DNA1) labeled with Au NPs, pre-assembled In the experimental system of sulfhydrylated hairpin structure DNA (H-DNA2) on the SPR gold chip, when there is no target molecule adenosine, the H-DNA1 on Au-H-DNA1 maintains the hairpin structure and cannot be combined with the pre-assembled The hairpin structure H-DNA2 hybridization on the surface of gold flakes cannot capture Au NPs on the surface of gold flakes. However, when the target molecule adenosine exists, the specific binding of adenosine to the aptamer promotes the folding of the aptamer and changes the conformation, so that c-DNA1 is released from the aptamer/c-DNA1 double strand and binds with Au-H -DNA1 is hybridized to open the ring, and the Au-H-DNA1 after the ring is hybridized with the H-DNA2 pre-assembled on the surface of the gold sheet to capture Au NPs on the gold sheet, and at the same time replace c-DNA1, and the replaced c-DNA1 Then trigger the next round of DNA strand replacement cycle. Through such a DNA strand replacement cycle, a single adenosine molecule can trigger the assembly of a large number of Au-H-DNA1 on the SPR gold sheet. The amplification effect of Au NPs on the SPR signal greatly enhanced the SPR measurement signal, and the detection limit of adenosine was as low as pM level. At the same time, the high specificity of the aptamer makes the sensor have good anti-interference ability. The SPR aptamer sensor constructed based on the double amplification strategy of Au NPs on the SPR signal coupling amplification effect and target-induced DNA strand replacement cycle provides a universal platform for highly sensitive and selective detection of low-concentration biological small molecules. It has a good application prospect.
为成功构建所述的适配体传感器,本发明采用以下技术方案: In order to successfully construct the aptasensor, the present invention adopts the following technical solutions:
基于Au NPs和DNA循环双放大技术的适配体传感器构建包括以下步骤: The construction of aptasensor based on Au NPs and DNA loop double amplification technology includes the following steps:
(1)Au NPs的制备:将50 mL的质量百分比为0.01%的HAuCl4溶液加入到100 mL圆底烧瓶中,加热至沸腾后,在机械搅拌下迅速加入1 mL的质量百分浓度为5%的柠檬酸三钠溶液,继续搅拌并保持沸腾,溶液颜色由黄色变成深酒红色时停止加热,搅拌下自然冷却至室温,即获得平均粒径为13 nm的稳定且单分散的Au NPs,于4 °C保存备用; (1) Preparation of Au NPs: Add 50 mL of HAuCl 4 solution with a mass percentage of 0.01% into a 100 mL round-bottomed flask, heat to boiling, then quickly add 1 mL of HAuCl 4 solution with a mass percentage of 5 % trisodium citrate solution, continue to stir and keep boiling, stop heating when the color of the solution changes from yellow to deep wine red, and naturally cool to room temperature under stirring, and obtain stable and monodisperse Au NPs with an average particle size of 13 nm, Store at 4 °C for later use;
(2)Au NPs-H-DNA1的制备:巯基化H-DNA1用100 μL新配制的1 mM二硫苏糖醇溶液活化过柱后,与1 mL步骤(1)制备的Au NPs溶液混合,在摇床上振荡孵育12 h,将产物分散于磷酸盐(PBS)缓冲溶液中,25 °C放置40 h;在14000 rpm下离心10 min,弃去上清液,离心后的红色油状沉淀用PBS缓冲溶液清洗并离心3次,除去没有与Au NPs反应的H-DNA1;将获得的Au NPs-H-DNA1重悬于PBS缓冲溶液中,4 °C下保存备用; (2) Preparation of Au NPs-H-DNA1: thiolated H-DNA1 was activated on the column with 100 μL of freshly prepared 1 mM dithiothreitol solution, and mixed with 1 mL of Au NPs solution prepared in step (1), Shake and incubate on a shaker for 12 h, disperse the product in phosphate (PBS) buffer solution, and place at 25 °C for 40 h; centrifuge at 14,000 rpm for 10 min, discard the supernatant, and wash the red oily precipitate with PBS after centrifugation The buffer solution was washed and centrifuged 3 times to remove the H-DNA1 that did not react with Au NPs; the obtained Au NPs-H-DNA1 was resuspended in PBS buffer solution and stored at 4 °C for later use;
(3)SPR适配体传感界面的构建:将金片在体积比7:3的H2SO4:H2O2混合溶液中浸泡2 min,用二次水冲洗干净,浸入10 mM的巯基己醇溶液中2 h,用二次水冲洗并用氮气吹干后,装入SPR检测池;注入50 μL、1.2 μM的巯基化发夹结构H-DNA2溶液反应2 h,制得预组装了H-DNA2的传感界面; (3) Construction of the SPR aptamer sensing interface: Soak the gold sheet in a mixed solution of H 2 SO 4 :H 2 O 2 with a volume ratio of 7:3 for 2 min, rinse with secondary water, and immerse in 10 mM After 2 h in mercaptohexanol solution, rinse with secondary water and blow dry with nitrogen, put it into the SPR detection cell; inject 50 μL, 1.2 μM solution of thiolated hairpin structure H-DNA2 to react for 2 h, and prepare the preassembled The sensing interface of H-DNA2;
上述步骤中,步骤(2)中,所述的二硫苏糖醇溶液用浓度为170 mM、pH为8.0的磷酸盐缓冲溶液配制。所述的磷酸盐缓冲溶液浓度为10 mM,pH为7.4,含0.1 M NaCl。步骤(3)中,所述的巯基己醇溶液用无水乙醇配制。所述的巯基化发夹结构DNA溶液用浓度为10 mM、pH为7.4且含0.1 M NaCl的磷酸盐缓冲溶液配制。 In the above steps, in step (2), the dithiothreitol solution is prepared with a phosphate buffer solution with a concentration of 170 mM and a pH of 8.0. The concentration of the phosphate buffer solution is 10 mM, pH is 7.4, and contains 0.1 M NaCl. In step (3), the mercaptohexanol solution is prepared with absolute ethanol. The thiolated hairpin structure DNA solution is prepared with a phosphate buffer solution with a concentration of 10 mM, a pH of 7.4, and 0.1 M NaCl.
基于Au NPs和DNA循环双放大技术的适配体传感器的应用,是指它在腺苷检测中的应用:20 μL、1.0 μM的腺苷适配体和相同比例的探针DNA在37 °C孵育2 h,形成适配体/c-DNA1双链;加入20 μL不同浓度的腺苷溶液,在37 °C孵育2 h,腺苷与其适配体特异性结合而将探针DNA从适配体/c-DNA1双链中释放出来;取25 μL上述溶液加入到25 μL Au NPs-H-DNA1溶液中,将该混合溶液注入到SPR检测池中使其与预组装于传感界面的H-DNA2反应1 h;用蠕动泵将反应溶液排出并注入50 μL二次水进行清洗;随着腺苷浓度的增大,捕获到传感界面的Au NPs逐渐增多,SPR响应信号迅速增强,SPR角度变化与腺苷浓度在0.5-50 pM范围内呈良好的线性关系,检测限为0.21 pM,可用于对腺苷的超灵敏和超低浓度检测。 The application of the aptamer sensor based on Au NPs and DNA loop double amplification technology refers to its application in the detection of adenosine: 20 μL, 1.0 μM of adenosine aptamer and the same ratio of probe DNA at 37 °C Incubate for 2 h to form aptamer/c-DNA1 double strands; add 20 μL of adenosine solution of different concentrations and incubate at 37 °C for 2 h, adenosine specifically binds to its aptamer to separate the probe DNA from the aptamer 25 μL of the above solution was added to 25 μL of Au NPs-H-DNA1 solution, and the mixed solution was injected into the SPR detection cell to combine with the H pre-assembled on the sensing interface. - DNA2 was reacted for 1 h; the reaction solution was discharged with a peristaltic pump and injected into 50 μL of secondary water for washing; with the increase of adenosine concentration, the Au NPs captured on the sensing interface gradually increased, and the SPR response signal increased rapidly, and the SPR The angle change has a good linear relationship with the concentration of adenosine in the range of 0.5-50 pM, and the detection limit is 0.21 pM, which can be used for ultra-sensitive and ultra-low concentration detection of adenosine.
本发明的技术效果是:本发明结合Au NPs对SPR信号的耦合放大效应和目标引发DNA链替换放大技术,发展了一种无酶SPR适配体传感器,用于对腺苷的高灵敏和选择性检测。优点如下:(1)采用目标引发DNA链替换循环放大技术,通过多次循环放大,单个腺苷分子可以引发大量Au NPs组装到SPR传感界面上;(2)Au NPs具有高分子质量和高介电常数,而且,SPR金膜与Au NPs还具有电场耦合谐振作用,这些都使得Au NPs能够极大地提高SPR响应信号,进而提高检测灵敏度;(3)利用本发明的双重放大方法,可实现pM级腺苷的检测,比基于单重放大如Au NPs放大或DNA链替换循环放大效应构建的传感器对腺苷的检测限低3个数量级;(4)适配体对其目标物的高特异性,使得本发明构建的传感器对腺苷具有良好的选择性。 The technical effect of the present invention is: the present invention combines the coupling amplification effect of Au NPs on the SPR signal and the target-induced DNA strand replacement amplification technology, and develops an enzyme-free SPR aptamer sensor for high sensitivity and selection of adenosine Sex detection. The advantages are as follows: (1) Using target-induced DNA strand replacement cyclic amplification technology, a single adenosine molecule can trigger a large number of Au NPs to assemble on the SPR sensing interface through multiple cyclic amplifications; (2) Au NPs have high molecular weight and high Moreover, the SPR gold film and Au NPs also have an electric field coupling resonance effect, which enables Au NPs to greatly improve the SPR response signal, thereby improving the detection sensitivity; (3) using the double amplification method of the present invention, it can be realized The detection of adenosine at the pM level is 3 orders of magnitude lower than the detection limit of adenosine based on single-fold amplification such as Au NPs amplification or DNA strand replacement cycle amplification; (4) High specificity of the aptamer to its target properties, so that the sensor constructed in the present invention has good selectivity to adenosine.
附图说明 Description of drawings
图1是SPR适配体传感器构建及其对腺苷检测的原理图。 Figure 1 is a schematic diagram of the construction of the SPR aptamer sensor and its detection of adenosine.
图2是(a)Au NPs和(b)Au-H-DNA1的紫外-可见吸收光谱图。 Figure 2 is the UV-Vis absorption spectra of (a) Au NPs and (b) Au-H-DNA1.
图3是(a)裸电极,(b)MCH,(c)H-DNA2和(d)Au-H-DNA1/H-DNA2 修饰电极的(A)循环伏安曲线和(B)交流阻抗曲线。内插图为等效电路图;Rs,Zw,Ret和Cdl分别为溶液电阻,Warburg电阻,电子转移阻抗和双层电容。 Figure 3 is the (A) cyclic voltammetry curve and (B) AC impedance curve of (a) bare electrode, (b) MCH, (c) H-DNA2 and (d) Au-H-DNA1/H-DNA2 modified electrode . The inset is the equivalent circuit diagram; R s , Z w , Ret and C dl are solution resistance, Warburg resistance, electron transfer resistance and double layer capacitance, respectively.
图4是(A)链替换循环时间,(B)H-DNA2浓度,(C)H-DNA1浓度对SPR传感器性能的影响。 Figure 4 is the effect of (A) strand replacement cycle time, (B) H-DNA2 concentration, (C) H-DNA1 concentration on the performance of the SPR sensor.
图5是不同方式检测50 pM腺苷的SPR响应曲线:(a)链替换循环放大,(b)Au NPs放大,(c)Au NPs与链替换循环双重放大。 Figure 5 is the SPR response curves of detecting 50 pM adenosine in different ways: (a) strand replacement cycle amplification, (b) Au NPs amplification, (c) Au NPs and strand replacement cycle dual amplification.
图6是(A)裸金片,(B)Au NPs与链替换循环双重放大检测50 pM腺苷后的金片和(C)Au NPs放大检测50 pM腺苷后的金片表面的SEM图。 Figure 6 is the SEM images of (A) bare gold flakes, (B) gold flakes after Au NPs and strand replacement cycle dual amplification detection of 50 pM adenosine and (C) Au NPs amplification detection of 50 pM adenosine .
图7是(A)Au NPs与链替换循环双放大检测腺苷的SPR曲线:a–i分别为 0,0.5,1,5,10,30,40,50和100 pM的腺苷。(B)腺苷检测校正曲线:(a)Au NPs与链替换循环双放大,(b)Au NPs 放大和(c)链替换循环放大。 Figure 7 is (A) SPR curves of Au NPs and strand displacement cycle double amplification for detection of adenosine: a–i are 0, 0.5, 1, 5, 10, 30, 40, 50 and 100 pM adenosine, respectively. (B) Calibration curves for adenosine detection: (a) dual amplification of Au NPs with strand replacement cycle, (b) amplification of Au NPs and (c) amplification of strand replacement cycle.
图8是基于Au NPs与链替换循环双重放大检测方式构建的传感器对腺苷、尿苷、鸟苷和胞苷的SPR响应曲线。 Figure 8 is the SPR response curves of the sensor to adenosine, uridine, guanosine and cytidine constructed based on Au NPs and strand replacement cycle dual amplification detection.
具体实施方式 Detailed ways
下面结合附图和具体实施例对本发明作进一步阐述,本发明并不限于此; The present invention will be further elaborated below in conjunction with accompanying drawing and specific embodiment, and the present invention is not limited thereto;
实施例Example 11
(1)Au NPs的制备:将50 mL的质量百分比为0.01%的HAuCl4溶液加入到100 mL圆底烧瓶中,加热至沸腾后,在机械搅拌下迅速加入1 mL的质量百分浓度为5%的柠檬酸三钠溶液,继续搅拌并保持沸腾,溶液颜色由黄色变成深酒红色时停止加热,搅拌下自然冷却至室温,即获得平均粒径为13 nm的稳定且单分散的Au NPs,于4 °C保存备用; (1) Preparation of Au NPs: Add 50 mL of HAuCl 4 solution with a mass percentage of 0.01% into a 100 mL round-bottomed flask, heat to boiling, then quickly add 1 mL of HAuCl 4 solution with a mass percentage of 5 % trisodium citrate solution, continue to stir and keep boiling, stop heating when the color of the solution changes from yellow to deep wine red, and naturally cool to room temperature under stirring, and obtain stable and monodisperse Au NPs with an average particle size of 13 nm, Store at 4 °C for later use;
(2)Au NPs-H-DNA1的制备:巯基化H-DNA1用100 μL新配制的1 mM二硫苏糖醇溶液活化过柱后,与1 mL步骤(1)制备的Au NPs溶液混合,在摇床上振荡孵育12 h,将产物分散于PBS缓冲溶液中,25 °C放置40 h;在14000 rpm下离心10 min,弃去上清液,离心后的红色油状沉淀用PBS缓冲溶液清洗并离心3次,除去没有与Au NPs反应的H-DNA1;将获得的Au NPs-H-DNA1重悬于PBS缓冲溶液中,4 °C下保存备用; (2) Preparation of Au NPs-H-DNA1: thiolated H-DNA1 was activated on the column with 100 μL of freshly prepared 1 mM dithiothreitol solution, and mixed with 1 mL of Au NPs solution prepared in step (1), Shake and incubate on a shaker for 12 h, disperse the product in PBS buffer solution, and place at 25 °C for 40 h; centrifuge at 14,000 rpm for 10 min, discard the supernatant, and wash the red oily precipitate with PBS buffer solution after centrifugation. Centrifuge 3 times to remove H-DNA1 that has not reacted with Au NPs; resuspend the obtained Au NPs-H-DNA1 in PBS buffer solution, and store at 4 °C for later use;
采用紫外-可见光谱对Au NPs标记H-DNA1探针的制备进行了表征,结果如图2所示。曲线a中520 nm处的吸收峰表明合成的Au NPs粒径约13 nm。当将巯基化H-DNA1修饰于Au NPs表面后,520 nm处的吸收峰红移至526 nm,表明巯基化的H-DNA1与Au NPs发生了相互作用,形成了Au-H-DNA1探针,而且,形成的Au-H-DNA1在浓度为0.1 M的NaCl溶液中非常稳定。 The preparation of Au NPs-labeled H-DNA1 probe was characterized by UV-vis spectroscopy, and the results are shown in Figure 2. The absorption peak at 520 nm in curve a indicates that the synthesized Au NPs have a particle size of about 13 nm. When thiolated H-DNA1 was modified on the surface of Au NPs, the absorption peak at 520 nm shifted red to 526 nm, indicating that the thiolated H-DNA1 interacted with Au NPs to form the Au-H-DNA1 probe , and the formed Au-H-DNA1 was very stable in 0.1 M NaCl solution.
实施例Example 22
SPR适配体传感器的制备过程 Preparation process of SPR aptasensor
(1)将金片在体积比7:3的H2SO4:H2O2混合溶液中浸泡2 min,用二次水冲洗干净,浸入10 mM的巯基己醇溶液中2 h,用二次水冲洗并用氮气吹干后,装入SPR检测池。注入50 μL、1.2 μM的H-DNA2溶液反应2 h,制得预组装了H-DNA2的传感界面; (1) Soak the gold sheet in the mixed solution of H 2 SO 4 :H 2 O 2 with a volume ratio of 7:3 for 2 min, rinse it with secondary water, immerse it in 10 mM mercaptohexanol solution for 2 h, and wash it with distilled water After rinsed with water and dried with nitrogen, it was loaded into the SPR detection cell. Inject 50 μL, 1.2 μM H-DNA2 solution and react for 2 h to prepare the sensing interface pre-assembled with H-DNA2;
(2)将20 μL、1.0 μM的腺苷适配体和相同比例的c-DNA1在37 °C孵育2 h,加入20 μL不同浓度的腺苷溶液,在37 °C孵育2 h;取25 μL上述溶液加入到25 μL Au NPs-H-DNA1溶液中,将该混合溶液注入到SPR检测池中使其与预组装于传感界面的H-DNA2反应1 h;用蠕动泵将反应溶液排出并注入50 μL二次水进行清洗; (2) Incubate 20 μL, 1.0 μM adenosine aptamer and the same ratio of c-DNA1 at 37 °C for 2 h, add 20 μL of adenosine solution of different concentrations, and incubate at 37 °C for 2 h; take 25 Add μL of the above solution to 25 μL Au NPs-H-DNA1 solution, inject the mixed solution into the SPR detection cell to react with the H-DNA2 pre-assembled on the sensing interface for 1 h; use a peristaltic pump to discharge the reaction solution And inject 50 μL of secondary water for cleaning;
采用循环伏安法和电化学交流阻抗法对SPR传感器的制备过程进行表征。由图3A可见,裸金电极上呈现一对可逆的[Fe(CN)6]3-/4-的氧化还原峰(曲线a);当在电极表面组装一层MCH后,[Fe(CN)6]3-/4-的氧化还原峰电流减小(曲线 b);通过金-巯键将H-DNA2修饰于金电极表面后,峰电流进一步减小(曲线 c);当50 pM腺苷与腺苷适配体/c-DNA双链反应2 h后,加入Au NPs-H-DNA1并注入SPR检测池孵育1 h,[Fe(CN)6]3-/4-在电极表面的氧化还原电流进一步减小(曲线 d),这是由于大量Au-H-DNA1被固定于SPR金片表面的H-DNA2捕获,增加了电极表面的负电荷密度,阻碍了[Fe(CN)6]3−/4−向电极表面的电子转移。图3B为不同修饰电极的EIS表征,裸金电极的电子传递阻抗(R et)仅为0.2 KΩ(曲线 a);当在电极表面组装上MCH后,R et增大为12 KΩ(曲线 b);进而通过金-巯键组装上H-DNA2后,R et增大为16.8 KΩ(曲线 c);当50 pM腺苷存在时,DNA链替换循环被启动,使得大量Au NPs-H-DNA1开环并被捕获到SPR金片表面,R et显著增大至24.4 KΩ(曲线 d)。EIS与CV结果一致,表明传感界面已按照预定方案成功构建。 The preparation process of the SPR sensor was characterized by cyclic voltammetry and electrochemical impedance spectroscopy. It can be seen from Figure 3A that a pair of reversible [Fe(CN) 6 ] 3-/4- redox peaks (curve a) appears on the bare gold electrode; when a layer of MCH is assembled on the electrode surface, [Fe(CN) 6 ] The redox peak current of 3-/4- decreases (curve b); after modifying H-DNA2 on the surface of gold electrode through gold-sulfhydryl bond, the peak current further decreases (curve c); when 50 pM adenosine After reacting with the adenosine aptamer/c-DNA duplex for 2 h, Au NPs-H-DNA1 was added and injected into the SPR detection cell for incubation for 1 h, the oxidation of [Fe(CN) 6 ] 3-/4- on the electrode surface The reduction current further decreases (curve d), because a large amount of Au-H-DNA1 is captured by H-DNA2 immobilized on the surface of the SPR gold sheet, which increases the negative charge density on the electrode surface and hinders the [Fe(CN) 6 ] 3−/4− electron transfer to the electrode surface. Figure 3B is the EIS characterization of different modified electrodes. The electron transfer resistance ( R et ) of the bare gold electrode is only 0.2 KΩ (curve a); when MCH is assembled on the electrode surface, R et increases to 12 KΩ (curve b) ; and after H-DNA2 was assembled through gold-sulfhydryl bonds, R et increased to 16.8 KΩ (curve c); when 50 pM adenosine was present, the DNA strand replacement cycle was initiated, making a large number of Au NPs-H-DNA1 open ring and was trapped on the surface of the SPR gold flake, Ret increased significantly to 24.4 KΩ (curve d). The EIS is consistent with the CV results, indicating that the sensing interface has been successfully constructed according to the predetermined scheme.
实施例Example 33
SPR适配体传感器对腺苷的检测 Detection of Adenosine by SPR Aptamer Sensor
(1)链替换循环时间,H-DNA2浓度,H-DNA1浓度的优化 (1) Optimization of strand replacement cycle time, H-DNA2 concentration, and H-DNA1 concentration
图4A为不同链替换循环反应时间时传感器对50 pM和0 pM腺苷的SPR响应。由图可见,对50 pM腺苷,随着链替换循环反应时间的延长,SPR响应强度随之增强,1 h后趋于稳定;当没有腺苷存在时,随着反应时间的延长,SPR响应强度随之稍有增强。因此,选择链替换循环反应为1 h。图4B为H-DNA2浓度对SPR传感响应的影响。当H-DNA2浓度为1.2 μM时,传感器的信噪比最佳,进一步增加H-DNA2浓度,SPR响应稍有下降,这是由于尽管组装在金片上的捕获探针密度增加,但高密度的发夹结构探针增加了空间位阻而不利于H-DNA2与Au-H-DNA1的杂交。因此,实验选择1.2 μM为H-DNA2的最佳浓度。图4C为H-DNA1浓度对SPR传感响应的影响。随着H-DNA1浓度的增加(0.5-0.9 μM),传感器的背景信号与其对50 pM腺苷的SPR信号均增大,进一步增加H-DNA1浓度,SPR信号下降,这是由于修饰在Au NPs上的H-DNA1过密,其空间位阻效应抑制了杂交效率。因此,选择H-DNA1的最佳浓度为0.9 μM。 Figure 4A shows the SPR response of the sensor to 50 pM and 0 pM adenosine at different strand displacement cycle reaction times. It can be seen from the figure that for 50 pM adenosine, the intensity of the SPR response increases with the prolongation of the strand replacement cycle reaction time, and tends to be stable after 1 h; when there is no adenosine, the SPR response intensity increases with the prolongation of the reaction time The intensity increases slightly accordingly. Therefore, the selection strand replacement cycle reaction was 1 h. Figure 4B shows the effect of H-DNA2 concentration on the SPR sensing response. When the concentration of H-DNA2 was 1.2 μM, the signal-to-noise ratio of the sensor was optimal, further increasing the concentration of H-DNA2, the SPR response decreased slightly, which was due to the fact that although the density of capture probes assembled on the gold chip increased, the high-density The hairpin structure probe increases the steric hindrance and is not conducive to the hybridization of H-DNA2 and Au-H-DNA1. Therefore, 1.2 μM was chosen as the optimal concentration of H-DNA2 in the experiment. Figure 4C shows the effect of H-DNA1 concentration on the SPR sensing response. As the concentration of H-DNA1 increased (0.5–0.9 μM), both the background signal of the sensor and its SPR signal to 50 pM adenosine increased, further increasing the concentration of H-DNA1, the SPR signal decreased, which was due to the modification in Au NPs The H-DNA1 on the surface is too dense, and its steric hindrance effect inhibits the hybridization efficiency. Therefore, the optimal concentration of H-DNA1 was selected as 0.9 μM.
(2)为了验证Au NPs与链替换循环双放大效应对腺苷检测的放大效果,对仅基于Au NPs或链替换循环放大技术构建的传感器对50 pM腺苷的SPR响应进行了考察,结果如图5所示。由图可见,链替换循环放大方式对50 pM腺苷的SPR响应只有14.1 mo(曲线 a),而Au NPs放大方式对50 pM腺苷的SPR响应为80.3 mo(曲线 b),是基于链替换循环放大响应的5.7倍;Au NPs与链替换循环双放大方式对50 pM腺苷的SPR响应为996 m(曲线c),是基于Au NPs放大响应的12.5倍,表明Au NPs与链替换循环双重放大方式对腺苷检测具有明显的放大增强效果。这是由于链替换循环模式促使大量的Au-H-DNA1组装到SPR金片表面,Au NPs与金膜间的电子耦合作用,使得SPR信号被高效放大。而在Au NPs放大方式中,一条短链DNA(c-DNA2)代替了发夹H-DNA2固定在SPR金片表面。c-DNA2含有12个碱基,能与Au-H-DNA1的临近3’端的12个碱基杂交,但是,该杂交过程不能将c-DNA1链从Au-H-DNA1/c-DNA1双链中释放出来,因而不能引发DNA链替换循环,故Au-H-DNA1与c-DNA2按1:1的化学计量比杂交固定到SPR金片上,无法实现对SPR信号的进一步放大; (2) In order to verify the amplification effect of the double amplification effect of Au NPs and strand replacement cycle on the detection of adenosine, the SPR response of the sensor constructed only based on Au NPs or strand replacement cycle amplification technology to 50 pM adenosine was investigated. The results are as follows: Figure 5 shows. It can be seen from the figure that the SPR response of strand replacement cycle amplification to 50 pM adenosine is only 14.1 m o (curve a), while the SPR response of Au NPs amplification to 50 pM adenosine is 80.3 m o (curve b), which is based on The amplification response of strand replacement cycle is 5.7 times; the SPR response of Au NPs and strand replacement cycle dual amplification method to 50 pM adenosine is 996 m (curve c), which is 12.5 times of the amplification response based on Au NPs, indicating that Au NPs and strand replacement The cyclic double amplification method has obvious amplification and enhancement effect on the detection of adenosine. This is due to the fact that a large amount of Au-H-DNA1 is assembled on the surface of the SPR gold sheet due to the strand replacement cycle mode, and the electronic coupling between the Au NPs and the gold film makes the SPR signal be amplified efficiently. In the amplification method of Au NPs, a short strand of DNA (c-DNA2) replaced the hairpin H-DNA2 and was immobilized on the surface of the SPR gold sheet. c-DNA2 contains 12 bases and can hybridize with the 12 bases near the 3' end of Au-H-DNA1. However, the hybridization process cannot separate the c-DNA1 strand from the Au-H-DNA1/c-DNA1 double strand Therefore, Au-H-DNA1 and c-DNA2 are hybridized and immobilized on the SPR gold sheet at a stoichiometric ratio of 1:1, which cannot further amplify the SPR signal;
采用扫描电子显微镜对三种不同放大方式检测50 pM腺苷后的金片表面形貌进行了表征,结果如图6所示。SPR金片表面较为光滑(图6A),当采用Au NPs与链替换循环双重放大方式检测50 pM腺苷后,大量Au NPs均匀地负载于金片表面(图6B),表明通过链替换循环模式促使溶液中大量的Au-H-DNA1与金片表面的H-DNA2发生杂交而捕获到SPR金片上。当采用Au NPs放大方式检测50 pM腺苷后,在金片表面只有少量的Au NPs(图6C),覆盖率远低于图6B,这是由于Au-H-DNA1与固定于金片表面的短链c-DNA2只能以1:1的形式杂交,限制了Au-H-DNA1固定到金片上的量。 The surface morphology of the gold flakes after detecting 50 pM adenosine in three different magnification methods was characterized by scanning electron microscopy, and the results are shown in Figure 6. The surface of SPR gold flakes is relatively smooth (Fig. 6A). When 50 pM adenosine was detected by double amplification method of Au NPs and strand replacement cycle, a large number of Au NPs were evenly loaded on the surface of gold flakes (Fig. 6B), indicating that through the chain replacement cycle mode A large amount of Au-H-DNA1 in the solution is hybridized with H-DNA2 on the surface of the gold sheet and captured on the SPR gold sheet. When Au NPs amplification method was used to detect 50 pM adenosine, there were only a small amount of Au NPs on the surface of the gold flakes (Figure 6C), and the coverage rate was much lower than that in Figure 6B, which was due to the interaction between Au-H-DNA1 and the adenosine immobilized on the gold flake surface. The short-strand c-DNA2 can only hybridize in a 1:1 ratio, which limits the amount of Au-H-DNA1 immobilized on the gold chip.
(3)在优化条件下,按照图1所示对腺苷进行了检测,SPR曲线如图7A所示。SPR角度变化(ΔAngle)随着腺苷的浓度增加而增大,ΔAngle与腺苷浓度(C)在0.5-50 pM范围内有良好的线性关系,线性回归方程为Angle(mo)= 164.28 +16.31 C(R=0.9949),检测限为0.21 pM。在相同实验条件下,考察了仅基于Au NPs或链替换循环放大方式对腺苷的响应,结果如图7B所示。由图可见,基于Au NPs或链替换循环放大方式对腺苷检测的SPR响应明显低于Au NPs与链替换循环双重放大方式的SPR响应,检测限分别为0.52 nM和1.13 nM。可见,Au NPs与链替换循环双重放大方式可用于腺苷的高灵敏检测。 (3) Under optimized conditions, adenosine was detected as shown in Figure 1, and the SPR curve is shown in Figure 7A. The SPR angle change (ΔAngle) increases with the concentration of adenosine, and ΔAngle has a good linear relationship with the concentration of adenosine (C) in the range of 0.5-50 pM, and the linear regression equation is Angle (m o ) = 164.28 + 16.31 C (R=0.9949), with a detection limit of 0.21 pM. Under the same experimental conditions, the response to adenosine based only on Au NPs or strand replacement cyclic amplification was investigated, and the results are shown in Figure 7B. It can be seen from the figure that the SPR response of adenosine detection based on Au NPs or strand replacement cycle amplification method is significantly lower than that of Au NPs and strand replacement cycle dual amplification method, and the detection limits are 0.52 nM and 1.13 nM, respectively. It can be seen that the dual amplification method of Au NPs and strand replacement cycle can be used for highly sensitive detection of adenosine.
(4)以核苷家族的其它三种核苷(尿苷、鸟苷和胞苷)为干扰物,考察了传感器对腺苷检测的选择性,结果如图8所示。由图可见,在相同的实验条件下,传感器对50 pM腺苷的SPR响应最大,而对50 pM尿苷、鸟苷和胞苷几乎没有响应,表明本发明构建的传感器对腺苷检测具有良好的选择性。 (4) Using the other three nucleosides in the nucleoside family (uridine, guanosine, and cytidine) as interfering substances, the selectivity of the sensor for adenosine detection was investigated, and the results are shown in Figure 8. It can be seen from the figure that under the same experimental conditions, the sensor has the largest SPR response to 50 pM adenosine, but almost no response to 50 pM uridine, guanosine and cytidine, indicating that the sensor constructed by the present invention has good detection performance on adenosine. selectivity.
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