CN103408557A - Indolizidine alkaloid as well as preparation method and application thereof - Google Patents

Indolizidine alkaloid as well as preparation method and application thereof Download PDF

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CN103408557A
CN103408557A CN2013103629769A CN201310362976A CN103408557A CN 103408557 A CN103408557 A CN 103408557A CN 2013103629769 A CN2013103629769 A CN 2013103629769A CN 201310362976 A CN201310362976 A CN 201310362976A CN 103408557 A CN103408557 A CN 103408557A
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indolizidine
mould
fermented liquid
column chromatography
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谭仁祥
韩文博
梅亚宁
张爱华
张高飞
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Nanjing University
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Abstract

The invention the technical field of microbial engineering, and particularly relates to an indolizidine alkaloid extracted from a liquid fermented material of white croaker intestinal fungi IFB-Z10 (Curvulariasp.) as well as a preparation method and application thereof. The indolizidine alkaloid disclosed by the invention is obtained by being separated and purified from the fermentation liquor of curvularia IFB-Z10 sourced from oceans, has a very high inhibiting effect on clinical anaerobion without toxicity on cells, thereby being used for producing the lead compound as an antibiotic and applied to preparing an antibiotic drug.

Description

One class Indolizidine alkaloid and its preparation method and application
One technical field
The invention belongs to the microbial engineering field, be specifically related to the sp. from white Chinese croaker enteron aisle fungi IFB-Z10(Curvularia) liquid fermentate the class Indolizidine alkaloid that extracts and its preparation method and application.
Two background technologies
Along with the continuous discovery of environmental microorganism, more and more difficult from its secondary metabolite, finding skeleton novelty or the significant microbiotic of biological activity.In recent years, the researchist has invested sight the oceanic resources with great potential more, and has found therefrom that a lot of skeletons are novel or had the medicine source molecule of notable biological activity, for further research new antibiotic molecule is laid a good foundation.At present, the phenomenon of abuse of antibiotics grows in intensity clinically, has caused the generation of a lot of pathogenic bacteria of drug-resistant, and especially so-called superbacteria, even also appearred in drug-resistant bacteria.Therefore traditional microbiotic has seemed helpless, and the urgent hope of scientist can be found a kind of novel antibiotic molecule, tackles these clinical drug-resistant bacterial strains, thereby fundamentally removes patient's misery.
Three summary of the invention
The present invention is from the enteron aisle fungal component Curvularia fungi IFB-Z10(Curvularia sp. of marine fishes white Chinese croaker (Argyrosomus argentatus)) liquid fermentate extract the Indolizidine alkaloid that a class has remarkable inhibition Clinical Anaerobic Bacteria activity.
The problem that the present invention need to solve is:
1. provide a class to have clinical anaerobism pathogenic bacteria and suppress active Indolizidine Alkaloid.
2. a kind of method for preparing the Indolizidine Alkaloid is provided.
3. the application of Curvularia lunata Indolizidine Alkaloid in suppressing the Clinical Anaerobic Bacteria medicine.
Technical scheme of the present invention:
Curvularia lunata of the present invention is drawn from invention patent " a kind of curved spore mould and the alkaloidal preparation method and application of Indolizidine, patent No. ZL201110105504.6 ", and Curvularia lunata Indolizidine alkaloid of the present invention has following structural formula:
Figure BDA0000368472900000021
The single crystal structure figure of Curvularia lunata Indolizidine alkaloid Curvulamines A-C (1-3) is shown in Figure of description 1-3.
Curvularia lunata Indolizidine alkaloid preparation method, comprise the steps:
1. will be from fresh white Chinese croaker, separating, the thalline piece of the mould IFB-Z10 of curved spore that purifying obtains is inoculated in improvement Cha Shi substratum, on shaking table, 150rpm, 28 ℃ of condition bottom fermentations 12 days;
2. step 1 gained fermented liquid is filtered through gauze, filtrate is used ethyl acetate extraction, the dry black crude extract F that obtains of vacuum concentration;
3. step 2 gained medicinal extract F is carried out to the silica gel column chromatography segmentation, adopt chloroform/methanol gradient elution: 100:0,100:1,100:2,100:4,100:8,100:16, obtain 6 wash-out part F1-F6;
4. to medicinal extract F1, F2 and F4 adopt silica gel column chromatography, anti-phase C-18 column chromatography and Sephadex LH-20 chromatographic separation purifying to obtain containing the position F1-1 of three new compounds, F2-2 and F4-2 repeatedly;
5.F1-1 F2-2 and F4-2 prepare compound 1-3 through high pressure lipuid chromatography (HPLC) [chromatographic column: ODS-2Hypersil columns (5 μ, 250 * 10mm)].
Indolizidine alkaloid of the present invention has the effect of remarkable inhibition Clinical Anaerobic Bacteria, and does not have cytotoxicity, therefore can be used as a kind of microbiotic of novelty, and is applied in preparing antibiotic medicine.
Compared with prior art, the present invention has following outstanding advantages:
1. the Indolizidine alkaloid of the present invention compound that is the skeleton novelty, can be prepared into new antibiotic or lead compound, overcomes the shortcoming of existing antibiotic resistance.
2. Indolizidine alkaloid of the present invention can utilize microorganism to carry out liquid fermenting production, simple process, and the cycle is short, and cost is low, originates guaranteed.
The accompanying drawing explanation
Fig. 1 is the single crystal structure figure (comprising a methanol molecules) of compound 1.
Fig. 2 is the single crystal structure figure of compound 2.
Fig. 3 is the single crystal structure figure of compound 3.
Embodiment
By specific embodiment given below, can further understand the present invention.But they are not limitation of the invention.
Embodiment 1: the liquid fermenting mould IFB-Z10(Curvularia sp. of the curved spore of marine source)
The mould IFB-Z10 of curved spore of activation marine source, fresh thalline piece is inoculated in the 1000ml Erlenmeyer flask, every bottle of improvement Cha Shi substratum that contains 400ml, inoculation 5-6 bottle is on shaking table, under 150rpm, 28-30 ℃ condition, cultivate 3 days as seed liquor, then the inoculum size with 20ml was inoculated in seed liquor in the 1000ml Erlenmeyer flask of the improvement Cha Shi substratum that contains 400ml, 150rpm, 28-30 ℃ of condition bottom fermentation 12 days.
Embodiment 2: the alkaloidal extraction of Indolizidine with separate
In embodiment 1, the gained fermented liquid filters through gauze, and filtrate is used ethyl acetate extraction, the dry black crude extract F that obtains of vacuum concentration.Medicinal extract F is carried out to silica gel column chromatography, adopt chloroform/methanol gradient elution: 100:0,100:1,100:2,100:4,100:8,100:16, obtain 6 wash-out part F1-F6.Then medicinal extract F1 is carried out to Sephadex LH-20 separation with chloroform-methanol (v/v1:1), obtain F1-1, then recrystallization obtains compound 1 in methyl alcohol; (sherwood oil/acetone=10:1 → 1:1) obtains F2-2 to medicinal extract F2, then through partly preparing high-pressure liquid phase, and [chromatographic column: ODS-2Hypersil columns (5 μ, 250 * 10mm)] obtains compound 3 through silica gel column chromatography; Medicinal extract F4 obtains F4-2 through Sephadex LH-20 and ODS-A reverse phase silica gel (AA12S50) purifying, then by partly preparing high-pressure liquid phase [chromatographic column: ODS-2Hypersil columns (5 μ, 250 * 10mm)], prepares compound 2;
Embodiment 3: the alkaloidal Structural Identification of Indolizidine
The mass spectrum, nuclear magnetic resonance spectrum, X-ray single crystal diffraction that the alkaloidal structure of Indolizidine is based on them analyzed Analysis deterrmination.
Spectral data is as follows:
Curvulamine?A(1):yellow?needle;[α] 28 D-265(c0.03MeOH);UV(MeOH);λ max(logε)230(3.6),297(3.7)nm;IR(KBr)ν max:3416,2969,1644,1415,759cm -1;HRESIMS:m/z:347.1725[M+Na] +(calcd?for?C 20H 24N 2O 2Na +,347.1730); 1H?and 13C?NMR?see?table1.
Curvulamine?B(2):yellow?solid;[α] 28 D-181.7(c0.09MeOH);UV(MeOH)λ max(logε)231(3.9)nm;IR(KBr)ν max:3491,2925,1417,1023,759cm -1;HRESIMS:m/z:365.1846[M+Na] +(calcd?for?C 20H 26N 2O 3Na +,365.1841); 1H?and 13C?NMR?see?table2.
Curvulamine?C(3):yellow?solid;[α] 28 D-148.7(c0.08MeOH);UV(MeOH)λ max(logε)227(3.7)nm;IR(KBr)ν max:3502,2946,1508,1421,1035,763cm -1;HRESIMS:m/z:395.1956[M+Na] +(calcd?for?C 21H 28N 2O 4Na +,395.1947); 1H?and 13C?NMR?see?table3.
Table 1.curvulamine A (1) NMR data (500MHz)
Table1.NMR?spectral?data?of?curvulamine?A(1)
Figure BDA0000368472900000041
Table 2.curvulamine B (2) NMR data (500MHz)
Table2.NMR?spectral?data?of?curvulamine?B(2)
Figure BDA0000368472900000051
asignals?overlapped.
Table 3.curvulamine C (3) NMR data (500MHz)
Table3.NMR?spectral?data?of?curvulamine?C(3)
Figure BDA0000368472900000052
Figure BDA0000368472900000061
S: unimodal, d: doublet, t: triplet, dd: quartet, br: broad peak
The X-ray single crystal diffraction of compound 1 is analyzed: C 20H 26N 2O 3, M342.43, spacer is P2 (1) 2 (1) 2 (1), unit cell parameters a=7.2482 (1), b=13.3145 (1), c=20.2206 (2) Unit cell volume
Figure BDA0000368472900000063
Molecule number Z=4 in structure cell.R and wR value are respectively 0.0384,0.1130.With CuK α radiation, graphite monochromator.Use the ω scan mode, obtain 6495 of independent point diffractions.On microcomputer, parse the single crystal structure (seeing accompanying drawing 1) of compound 1 by direct method (SHELXS-97).
The X-ray single crystal diffraction of compound 2 is analyzed: C 20H 26N 2O 3, M342.43, spacer is C222 (1), unit cell parameters a=10.0414 (2), b=16.4683 (4), α=β=γ=90.00 °; Unit cell volume
Figure BDA0000368472900000065
Molecule number Z=8 in structure cell.R and wR value are respectively 0.0422,0.1186.With CuK α radiation, graphite monochromator.Use the ω scan mode, obtain 10898 of independent point diffractions.On microcomputer, parse the single crystal structure (seeing accompanying drawing 2) of compound 2 by direct method (SHELXS-97).
The X-ray single crystal diffraction of compound 3 is analyzed: C 21H 28N 2O 4, M372.45, spacer is C222 (1), unit cell parameters a=11.5101 (1), b=14.4654 (2),
Figure BDA0000368472900000066
α=β=γ=90.00 °; Unit cell volume
Figure BDA0000368472900000067
Molecule number Z=8 in structure cell.R and wR value are respectively 0.0556,0.2084.With CuK α radiation, graphite monochromator.Use the ω scan mode, obtain 5567 of independent point diffractions.On microcomputer, parse the single crystal structure (seeing accompanying drawing 3) of compound 2 by direct method (SHELXS-97).
Embodiment 4:MIC method is measured compound 1-3 anti-anaerobic activity
1) preparation of substratum
The PDA substratum: potato 200g, be chopped into fourth, add water boil 30min, with gauze elimination residue, filtrate adds water to 1000mL, adds 20g agar, heat fused, then add 20g glucose, packing after dissolving, 121 ℃ of sterilizing 20min; Screening for Active antifungal compound.
LB substratum: peptone 5g, yeast extract paste 15g, sodium-chlor 5g, agar 20g, distilled water 1000mL, (PH7.0 ± 0.2); For bacteria culture, preserve and screening active ingredients.
2) adopt micro-dilution method (96 well plate method) to carry out the mensuration of anti-microbial activity
With the dilution of the micropore at the bottom of 12 * 8 96 U-shaped holes, hole plate, measure, every row 12 holes, the 1-8 hole respectively adds the liquid of 50 μ L gradient concentrations, and (compound sample 0.5mg adds the DMSO hydrotropy of 50 μ L, be dissolved in the 1mL sterilized water, be made into the liquid of initial concentration 500 μ g/mL, each micropore first adds the sterilized water of 50 μ L, adopts the doubling dilution gradient dilution, is made into series concentration).9th, 10 holes add 500 μ L sterilized waters as negative control, then in the 1-10 hole, add respectively the 50 μ L bacterium liquid (10 that diluted concentration 5Individual bacterium or fungal spore/mL).The 11st hole, 12 holes add respectively 100 μ L2.5%DMSO solution and 100 μ L sterilized waters as blank, after the vibration of micropore dilution plate mixes, are placed in 37 ℃ and cultivate 18-24h.
Visual inspection: observations under the light source of black background is being arranged, having the hole of bacteria growing to be the diffuse type muddiness or clasp sample precipitation is arranged at bottom, the contained minimum sample concentration in the hole of asepsis growth is the minimum inhibitory concentration MIC of this sample.
Anti-anaerobic activity test result (table 4) shows: compound 1-3 can optionally suppress clinical bacterium Veillonella (Veillonella parvula), Actinomyces Israeli (Actinomyces israelii), streptococcus anaerobius (Streptococcus sp.), bacteroides vulgatus (Bacteroides vulgatus) and peptostreptococcus (Peptostreptococcus sp.).
The anti-anaerobic activity of table 4. compound curvulamies
Figure BDA0000368472900000071
aThe positive control tinidazole
Above results suggest, Indolizidine alkaloid curvulamines A-C (1-3) has very strong anti-anaerobic activity and has certain selectivity, and therefore Indolizidine alkaloid of the present invention can be developed into new antibiotic.

Claims (3)

1. Indolizidine alkaloid prepared by the mould IFB-Z10 fermented liquid of curved spore, its structure is:
Figure FDA0000368472890000011
2. the alkaloidal preparation method of Indolizidine for preparing of the mould IFB-Z10 fermented liquid of curved spore according to claim 1 is characterized in that consisting of following steps:
1). the mould IFB-Z10 of curved spore activated is inoculated in improvement Cha Shi substratum, and it consists of: sucrose 30g, yeast extract paste 1.0g, NaNO 33.0g, KCl0.5g, K 2HPO 41.0g, MgSO 47H 2O0.5g, FeSO 47H 2O0.01g, 1L distilled water, then be placed on shaking table, 150rpm, 28 ℃ of condition bottom fermentations 12 days;
2). step 1 gained fermented liquid is filtered through gauze, and filtrate is used ethyl acetate extraction, the dry black crude extract F that obtains of vacuum concentration;
3). F carries out the silica gel column chromatography segmentation to step 2 gained medicinal extract, adopts chloroform/methanol gradient elution: 100:0,100:1,100:2,100:4,100:8,100:16, obtain 6 wash-out part F1-F6;
4). to medicinal extract F1, F2 and F4 adopt silica gel column chromatography, anti-phase C-18 column chromatography and Sephadex LH-20 chromatographic separation purifying to obtain containing the position F1-1 of three compounds, F2-2 and F4-2 repeatedly;
5) .F1-1, F2-2 and F4-2, through high pressure lipuid chromatography (HPLC), prepare compound 1-3, and chromatographic column is: ODS-2Hypersil columns.
3. the application of Indolizidine alkaloid in preparing antibiotic medicine that prepare of the mould IFB-Z10 fermented liquid of the described curved spore of claim 1.
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