CN102146383A - Plant transformation terminator DNA (deoxyribonucleic acid) sequence and application thereof - Google Patents

Plant transformation terminator DNA (deoxyribonucleic acid) sequence and application thereof Download PDF

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CN102146383A
CN102146383A CN2010101125006A CN201010112500A CN102146383A CN 102146383 A CN102146383 A CN 102146383A CN 2010101125006 A CN2010101125006 A CN 2010101125006A CN 201010112500 A CN201010112500 A CN 201010112500A CN 102146383 A CN102146383 A CN 102146383A
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dna
sequence
plant
terminator
nucleotide sequence
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CN102146383B (en
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陈蕾
徐健勇
吴茜
李钦清
陈婉丽
赵建杰
温红雨
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BEIFANGJIESHI BIOLOGICAL SCIO-TECH Co Ltd BEIJING
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Abstract

The invention relates to a DNA (deoxyribonucleic acid) sequence separated from rice genome, which can be used as a terminator region in an exogenous gene expression structure in plant transformation. The invention comprises a DNA of which the nucleotide sequence is disclosed as SEQ ID NO.1, or a DNA of which the nucleotide sequence is deletion, substitution or addition of one or a plurality of bases on the basis of the nucleotide sequence disclosed as SEQ ID NO.1 and has more than 90% nucleotide sequence homology with any region composed of 1194 or more bases in the nucleotide sequence disclosed as SEQ ID NO.1. The biological functions of the DNA are equivalent to those of the DNA of which the nucleotide sequence is disclosed as SEQ ID NO.1. The invention also relates to construction of a transformation vector comprising the terminator sequence, and acquisition of a corresponding transgenic plant.

Description

A kind of Plant Transformation terminator dna sequence dna and application thereof
Technical field
The present invention relates to from the rice genome sequence, separate the purposes of the terminator sequence that obtains, and the application in vector construction, Plant Transformation and the genetic expression in plant biotechnology field.
Background technology
In plant transgenic technology, expression of exogenous gene will be passed through series of steps such as transcribing, transcribe post-treatment, translate and translate post-treatment, and produces specific aminoacid sequence in specific time and space.Can controlling gene phraseology and expression level by the different steps of genetic expression is regulated and control.In these control methods, except that the characteristics of gene itself, the expression regulation sequence at its two ends, the especially promoter sequence of 5 ' end and gene 3 ' end non-coding sequence (terminator sequence) often have intense influence to expression of gene.
In eukaryotic cell, precursor mRNA (Pre-mRNA) needs to translate active mRNA through just being formed with after further processing after transcribing, mRNA3 ' end often adds the afterbody of being made up of 25-250 nucleotide residue poly (A) in this process, this process is determined by one section nucleotide sequence of gene 3 ' end non-coding region that mainly this zone is referred to as 3 ' end processing signal (3 '-processing signal) or terminator (Terminator).
The most important factor is the poly-adenosine signal (Polyadenylation signal) that is positioned at the poly-adenosine site upstream 15-20 Nucleotide place of mRNA in the terminator sequence, generally by six Nucleotide AAUAAA that the conservative property of height arranged (or AAUUAA) composition.The 6th Nucleotide changes sometimes to some extent in plant mRNA, and the AAUAAA sequence is necessary for the fracture of precursor mRNA3 ' end and the polymerization of adenylic acid (AMP).The sequence of uridylic (U) or uridylic guanylic acid (UC) generally is rich in AAUAAA signal downstream, and its conservative property is not as good as the AAUAAA sequence, but also is necessary for cleavage reaction.
Though terminator does not have the function of enhanser, the plant terminators of different sources has very different influences for the expression of external source.Bibliographical information shows that 3 ' terminal sequence of different sources has strong influence for the Npt-II enzyme at the intracellular expression level of transformation of tobacco, reaches as high as and differs 60 times.
The most frequently used terminator is rouge alkali synthetase (NOS) terminator (T-Nos) in the transgenic engineering at present.The present invention has comprised one section dna sequence dna ostrbcs that originates from rice genome, test-results shows: in plant transgene was used, the ostrbcs sequence had the terminator function identical with T-Nos.
Summary of the invention
The purpose of this invention is to provide a kind of terminator sequence that in Plant Transformation, can be used as in the exogenous gene expression structure.
Terminator sequence provided by the present invention derives from rice genome, has following nucleotide sequence.
1) the SEQ ID № in the sequence table: 1 dna sequence dna;
2) with SEQ ID № in the sequence table: one or more base deletions, replacement or adding are arranged in 1 the nucleotide sequence, and with shown in the nucleotide sequence by 1194 or more any regional nucleotide sequence homology formed of polybase base surpass the DNA of 90% nucleotide sequence, this DNA has the terminator function.
Described one or more base deletion, replacement or adding are meant no more than 10% base deletion, replacement or adding.
3) under the rigorous condition of height can with SEQ ID № in the sequence table: the nucleotide sequence of the 1 dna sequence dna hybridization that limits.
The rigorous condition of above-mentioned height can be 60 ℃ of hybridization down in hybridization solution, and at 0.5 * SSC, in the solution of 0.1% SDS, washes film under 60 ℃.
Contain the expression vector of dna sequence dna of the present invention, artificial transfered cell system, host bacterium and expression cassette and all belong to protection scope of the present invention.
Use contains the expression vector of dna sequence dna of the present invention, manually transfered cell system, host bacterium and expression cassette all belong to protection scope of the present invention by the existing available conversion microorganism cells of molecular biological method and transformed plant cells, tissue and plant etc.
Terminator sequence of the present invention can add any promoter sequence and target gene sequences before its sequence in being building up to plant expression vector the time.By the plant transformed host both can be monocotyledons, it also can be dicotyledons, wherein, monocotyledons can be turfgrass, wheat, barley, oat, paddy rice or corn etc., and dicotyledons can be potato, tobacco, cotton, lettuce, tomato, muskmelon, cucumber, pea, beet or Sunflower Receptacle etc.
Carry this terminator sequence expression vector can Ti-plasmids, Ri plasmid, plant viral vector, directly DNA conversion, microinjection, electricity be led, conventional biological method transformed plant cells or tissue such as agriculture bacillus mediated by using, and the tissue cultivating that transforms is become plant.
Description of drawings
Fig. 1 plant expression vector pBI121 physical map
Fig. 2 plant expression vector pBI121-ostrbcs physical map
Fig. 3 transgene tobacco
Fig. 4 transgenic tall fescue grass
Fig. 5 transfer-gen plant PCR detects
Fig. 6 transgenic plant GUS tissue chemical analysis
Embodiment
Method therefor is ordinary method if no special instructions among the following embodiment, concrete steps can be with reference to (people such as Sambrook, the molecular cloning laboratory manual, New York:Cold Spring Harbor LaboratoryPress, 1989), used term and abbreviation all are general term of those skilled in the art and abbreviation.
The term that part is used for this specification sheets and claims has following implication:
-term " nucleic acid " is meant DNA or RNA;
-term " nucleotide sequence " is meant from 5 ' end and reads to the oligomer or the polymkeric substance of the nucleotide base of 3 ' strand of holding or two strands that it comprises self-replacation type plasmid, infectivity or noninfective gene and DNA or RNA polymkeric substance and functional or non-functional DNA or RNA.In being used for the application's Nucleotide symbol, except that specifically mentioning, the left end of strand or double chain nucleotide sequence is 5 ' end;
-term " promotor " or phrase " promoter region nucleotide sequence " are meant identification and the bonded nucleic acid district that is positioned at translation initiation codon upstream, RNA polymerase and other transcription factor;
-" plant promoter " is to start the promotor of transcribing in vegetable cell;
-phrase " connects with functional mode " or " functional connection " is meant: one section nucleotide sequence (for example promotor or regulate or functional block) is connected with another section nucleotide sequence (for example another adjusting or functional block or the gene proteic to be expressed to be produced of encoding), make described sequence in the cell of introducing it, genome, carrier or expression cassette, bring into play its original function, promptly make them in such environment, function be arranged.With regard to promotor, promoter sequence is also included within the transcription sequence between transcription initiation site and the translation initiation site;
-term " expression cassette " is meant such nucleotide sequence, and described nucleotide sequence can instruct the nucleotide sequence or the expression of gene of coding polypeptide to be produced in the host living beings compatible with this sequence.Such box comprises other factor that a promotor and transcription termination signal and optional expression are needed or can be used for expressing at least;
-term " carrier " is meant expression system, for example the projectile of DNA bag quilt, based on the transport vehicle of nucleic acid be changed nucleic acid molecule and autonomous self-replacation type cyclic DNA, for example plasmid, clay, phagemid etc. to transport described nucleic acid.Described carrier can or as being incorporated into Autonomous Structure in the host genome by during mitotic division, duplicating by described cytotostatic, perhaps maintain in host's the nucleus or tenuigenin;
-term " plasmid " is meant the autonomous ring-shaped DNA molecule that can duplicate in cell, comprise so-called " expression " plasmid and so-called " non-expression " plasmid.If it is the host of " expression plasmid " that a kind of reconstitution cell culture or microorganism are described to, then this term had both comprised karyomit(e) outer ring-like dna molecular, comprised the DNA that has been incorporated in the host chromosome again.If described plasmid is kept by host cell, then described plasmid or between m period as a kind of Autonomous Structure by described cytotostatic duplicate, perhaps be incorporated in described host's the genome;
-term " frame " is meant the nucleotide sequence of being responsible for regulatory function;
-term " is arranged in " and is meant the position of discriminating element (for example " frame ", restriction site or codon with specific function) at nucleotide sequence.The position that provides with numeral is meant the zero position of described element in described nucleotide sequence, just when specifically mentioning, so that the reading direction of described nucleotide sequence promptly 5 '---3 ' direction is mentioned;
-term " transgenic plant " is meant the plant that obtains by Genetic Manipulative Technology, and comprise the whole strain plant that obtains by these technology, in its genome, integrated this generic operation or express aftergrowth, its offspring and the plant organ of this generic operation, for example root, stem and leaf.Can have different ploidy levels according to transgenic plant of the present invention, can be polyploid, diploid or monoploid.
Embodiment 1, terminator dna sequence dna clone and analysis
(1) extracting of genomic dna
With CTAB method (Rogers, S.O. etc., 1985) extract oryza sativa genomic dna, concrete grammar is as follows: water intaking rice blade liquid nitrogen grinding, add 5 milliliters in the vegetable material of per 1 gram through the CTAB of 68 ℃ of preheatings solution (with before adding 0.2% mercaptoethanol), 60 ℃ were heated 30 minutes.Add the equal-volume chloroform then: primary isoamyl alcohol, centrifugal 15 minutes of 15000g gets supernatant.The Virahol that in supernatant liquor, adds 2/3 times of volume, mixing stirs out the DNA silk with the entry needle needle point and to place new pipe, adds 75% ethanol again, and washing precipitation and centrifugal tube wall blot ethanol then, and air is dried remaining ethanol, adding TE dissolving DNA.And in-20 ℃ of preservations.
(3) clone of ostrbcs sequence and analysis
With PCR (polymerase chain reaction) method amplification ostrbcs terminator dna fragmentation.The PCR reaction solution contains 1 μ g genomic dna, 1.5mM MgCl 2, 20mM Tris-HCl (pH8.4), 50mM KCl, 0.8mM dNTP mixture, 1 μ M, 5 ' primer and 1 μ M, 3 ' primer, and the Taq polysaccharase of 1 unit (Shanghai Shen You biotech company).Primer sequence is as follows:
5 ' primer: 5 '-ggcaactaagccgtcatcgtca-3 '
3 ' primer: 5 '-ctcgctttgtctccacttccgg-3 '
In PCR-thermal cycler (Eppendorf company, Germany), carry out PCR circulation with amplification ostrbcsDNA fragment according to following scheme: 94 5 minutes; 94 1 minute; 60 1 minute; 72 2 minutes, totally 30 circulations and 72 ℃ are 10 minutes.About 1194bp dna fragmentation that amplification is obtained reclaims this fragment with the scheme that gel reclaims test kit (sky, Beijing latitude Time Technology company limited) and provides by supplier, with (Promega company of pGEM-Teasy vector system, the U.S.) scheme that provides by supplier is cloned this fragment, order-checking.
Embodiment 2, plant expression vector construction
(1) selection of positive control plasmid
The structure of plant expression vector carries out according to a conventional method.With plasmid pBI121 (Genebank:AF485783) as positive control, β-glucuronidase (Jefferson etc. encode in this plasmid, 1987) gus gene is under the control of the nopaline synthase gene terminator of CaMV 35S promoter and root Agrobacterium (Agrobacterium tumefaciens), as shown in Figure 1.
(2) structure of conversion carrier pBI121-ostrbcs
The structure of plant expression vector carries out according to a conventional method.The 1194bp dna fragmentation that obtains in embodiment 1, (precious biotechnology (Dalian) company limited) carries out flush end processing (37 ℃, 30 minutes) with dna polymerase i (the big fragment of Klenow).The scheme that reclaims test kit (sky, Beijing latitude Time Technology company limited) and provide by supplier with dna gel is separated on 0.8% sepharose and is reclaimed.
Getting 5 μ g plasmid pBI121 digested 1 hour in 37 ℃ with restriction enzyme SacI (precious biotechnology (Dalian) company limited) and EcoRI (precious biotechnology (Dalian) company limited).(precious biotechnology (Dalian) company limited) carries out flush end processing (37 ℃, 30 minutes) with dna polymerase i (the big fragment of Klenow).The scheme that reclaims test kit (sky, Beijing latitude Time Technology company limited) and provide by supplier with dna gel is separated on 0.8% sepharose and is reclaimed the long dna fragmentation of 1194bp that be, and this fragment is the skeleton structure of having removed the Nos terminator, having contained the former pBI121 plasmid of CaMV 35S promoter and gus gene.
Get above-mentioned two kinds of gels and reclaim each about 0.2 μ g of fragment, in 16 ℃ of connections of spending the night, transformed into escherichia coli DH5 α cuts evaluation through colony screening and enzyme, obtains plasmid pBI121-ostrbcs, as shown in Figure 2 with the T4 ligase enzyme.
Embodiment 3, agrobacterium mediation converted plant
(1) cultivation of root Agrobacterium
The plant expression vector pBI121-ostrbcs that makes up among positive control matter pBI121 and the embodiment 2 is transformed Agrobacterium respectively, and the Agrobacterium bacterial classification is LBA4404.The Agrobacterium-mediated Transformation bacterial strain that obtains was cultivated 2 days on the YEB substratum, with little spoon bacterium is scraped at liquid and break up in the culture medium altogether, left standstill 2 hours, shake up the back and adjust bacterial concentration to OD 600Be 0.1.
(2) acquisition of transgene tobacco
Utilize improvement Ye Panfa, by the agrobacterium mediation converted tobacco.Get complete unfolded tobacco aseptic seedling blade, (diameter 0.9cm) makes the leaf dish with punch tool, soaks 10min in bacterium liquid.Take out the leaf dish, after blotting with aseptic filter paper, change in the common culture medium that is coated with one deck aseptic filter paper in 25 ℃ dark cultivate 2~3 days after, the leaf dish is changed in the subculture medium.Illumination cultivation in subculture medium (light/dark cycle is 16/8hrs) changed the leaf dish over to screening culture medium after 3 days.Continue to cultivate after 7~10 days, change the leaf dish over to regeneration culture medium.Promptly can be observed that blade edge grows callus or the regeneration bud of growing thickly in 15~20 days, can grow to 1~2cm about one month, change in the new regeneration culture medium, treat that it is long during to 3~4cm, with scalper regeneration bud is downcut, and change in the root media.Regrowth is taken root on the root media that contains kantlex (50mg/L), treat after one month that root system development fully after, seedling is transferred to the greenhouse growth.As shown in Figure 3.
(2) acquisition of transgenic tall fescue grass
Choose tall grass (the Festuca arundinacea Schreb.) seed of mature and plump, in distilled water, soak after 4 hours under the room temperature and peel off kind of a skin, put into distilled water again and continue soaked overnight.Soaked peeling seed crosses twice with 70% alcohol earlier, again with 30% clorox sterilization 30 minutes, aseptic water washing three times.Under aseptic condition,, callus inducing medium will be inserted again after the embryo crosscut into two respectively with embryo complete peeling from the seed that disinfects.
Use above-mentioned callus of induce substratum, per two to three weeks are changeed ware once with callus.Select for use through state adjust 10 days white of succeeding transfer culture or yellow-white, translucent, dry, surface has the callus of pimple to infect.
Placing callus through the resuspended bacterial concentration that leaves standstill is OD 600Infected 10 minutes in=0.1 the LBA4404 root Agrobacterium bacterium liquid, remove bacterium liquid, on aseptic filter paper, callus is dried (about 5 minutes), place the common culture medium that is covered with one deck aseptic filter paper, 25 ℃ of dark cultivations 3 days.
Cultivate the back altogether with inducing screening culture medium that callus is screened.To be connected to through the callus of cultivating altogether and induce screening culture medium at first to screen for 2 weeks, the resistant calli that as seen is fresh ivory buff grows.
To reach the above resistant calli of 0.5cm through the diameter of screening and be put on the differentiation screening culture medium and break up, and in 25 ℃ of following illumination cultivation (16h light/8h is dark).Have green budlet to occur after 10 days, an about afterwards week can be grown to seedling.
The seedling that will break up before taking root is removed the unnecessary callus of leaf and bottom on top, be placed on the division culture medium in the triangular flask slow seedling and carry out root culture about 10 days again, after being inoculated in root media, approximately visible white young root grows after 3-5 days, about afterwards two weeks can form more flourishing sophisticated root system, as shown in Figure 4.
The PCR of embodiment 4, transformed plant identifies
Extract the genomic dna of transformed plant as method as described in the embodiment 1 (1), and be that template is carried out the PCR reaction, the part of amplification gus gene 3 ' end and ostrbcs terminator 5 ' end with the 100ng genomic dna.Reaction solution contains 100ng genomic dna, 1.5mM MgCl 2, 20mM Tris-HCl (pH8.4), 50mM KCl, 0.8mM dNTP mixture, 1 μ M, 5 ' primer and 1 μ M, 3 ' primer, and the Taq polysaccharase of 1 unit (Shanghai Shen You biotech company).Primer sequence is as follows:
5 ' primer: 5 '-tgcatcagccgattatcatc-3 '
3 ' primer: 5 '-ggtcgtcgtacagatttgct-3 '
In PCR-thermal cycler (Eppendorf company, Germany), carry out the PCR cyclic amplification according to following scheme: 94 5 minutes; 94 1 minute; 58 1 minute; 72 1 minute, totally 30 circulations and 72 ℃ are 10 minutes.Amplified production is carried out electrophoretic analysis as seen band is clearly arranged at the 1060bp place that estimates.As shown in Figure 5.
Embodiment 5, reporter gene activity detect---GUS tissue chemical analysis
The GUS histochemical stain is with reference to the detection method of (1987) such as Jefferson.The fresh blade of getting transfer-gen plant be soaked in the GUS reaction solution (0.1M NaPO4 damping fluid, pH 7.0,10mM EDTA, pH7.0, the 5mM Tripotassium iron hexacyanide, 5mM yellow prussiate of potash, 1.0mM X-Gluc, 0.1% Triton X-100), the tissue that soaks is vacuumized, spend the night in 37 ℃ of dark.Clean the dyeing tissue with distilled water, fix 1 hour, decolour, dewater, observe with stationary liquid (dehydrated alcohol/Glacial acetic acid, 3/1).The result shows: the plant (left three strains) that changes pBI121-ostrbcs is the same with the positive control plant (middle three strains) that changes pBI121, obviously display organization dyeing, but not transfer-gen plant (right two strains) is a white.As shown in Figure 6.
Figure ISA00000018216800011

Claims (7)

1. the terminator that can bring into play function in vegetable cell is characterized by the DNA that includes nucleotide sequence shown in the SEQ ID NO:1.
2. a carrier is characterized by the terminator dna sequence dna that comprises claim 1.
3. produce the method for transformant, it is characterized by the step that comprises the importing of the carrier in the claim 2 host cell.
4. microorganism transformed cell is characterized by terminator sequence in the claim 1 that contains importing or the carrier in the claim 2.
5. plant transformed cell and tissue is characterized by terminator sequence in the claim 1 that contains importing or the carrier in the claim 2.
6. transfer-gen plant, it is characterized by this plant and be application rights and require terminator sequence or the carrier in the claim 2 in 1 to obtain, contain in its final transformant or removed terminator sequence in the claim 1 or the carrier in the claim 2 through transforming.
7. according to described in the claim 6, transgenic plant comprise monocotyledons and dicotyledons, as turfgrass, wheat, barley, oat, paddy rice, corn, potato, tobacco, cotton, lettuce, tomato, muskmelon, cucumber, pea, beet or Sunflower Receptacle etc.
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN118147165A (en) * 2024-05-09 2024-06-07 中国热带农业科学院三亚研究院 Application of FTO gene in improving total solid content of latex

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US7294504B1 (en) * 2001-12-27 2007-11-13 Allele Biotechnology & Pharmaceuticals, Inc. Methods and compositions for DNA mediated gene silencing

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN118147165A (en) * 2024-05-09 2024-06-07 中国热带农业科学院三亚研究院 Application of FTO gene in improving total solid content of latex
CN118147165B (en) * 2024-05-09 2024-07-02 中国热带农业科学院三亚研究院 Application of FTO gene in improving total solid content of latex

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