Entecavir resistance variation detection kit
Technical field
The present invention relates to molecular biology and medical field, more specifically, the present invention relates to a kind of test kit that detects individual Entecavir resistance mutation genetic, assess individual Entecavir resistance by detecting Entecavir medication target site gene pleiomorphism.
Background technology
Entecavir is the guanosine-analogue, and is inhibited to hepatitis B virus (HBV) polymerase.It can become by phosphorylation and has active triphosphate, and triphosphate is 15 hours in the intracellular transformation period.Be applicable to that virus replication is active, lasting rising of serum transaminase ALT or liver histological show the treatment of the chronic one-tenth human hepatitis B of reactivity pathology.The oral administration biaavailability height, serum protein bonding force low (13%) is not inductor, inhibitor and the substrate of cytopigment isozyme.It appears in the urine with female medicine form by renal excretion, and the transformation period is 0.5-15h in the cell, through renal excretion.
The covariation of Entecavir resistance is on rtM204V+rtL180M variation basis, unites the amino acid replacement variation at least one site in three sites of rtT184, rtS202 or rtM250 again.
Summary of the invention
The invention provides a kind of test kit that detects individual Entecavir resistance mutation genetic target site gene pleiomorphism.
This test kit comprises: it is right to reaching the specificity fluorescent probe to detect the Auele Specific Primer that draws rtM204V, rtL180M, rtT184, rtS202 and rtM250 loci polymorphism, Taq enzyme, dNTP mixed solution, MgCl
2Solution, reaction buffer, deionized water.
Auele Specific Primer described in this test kit and fluorescent probe can be finished design for the person of ordinary skill of the art easily, and Auele Specific Primer and fluorescent probe synthesize the DNA synthetic technology of available routine.
Embodiment
Below in conjunction with specific embodiment, further set forth the present invention.The experimental technique of unreceipted actual conditions in the following example, usually according to normal condition, or the condition of advising according to manufacturer.
The use of embodiment detection kit
The extraction of step 1:DNA template
Genomic dna with silica gel adsorption extracting mouth epithelial cells.
Step 2: quantitative fluorescent PCR reaction
Use the quantitative fluorescent PCR suit in the detection kit, carry out the quantitative fluorescent PCR reaction, the system of reaction is cumulative volume 10 μ l, and comprising concentration is dna profiling 2 μ l, 1 μ l 10X quantitative fluorescent PCR reaction buffer, 0.1 μ l 25mM dNTP mixed solution, the 0.6 μ l 25mMMgCl of 20ng/ μ l
2The band VIC fluorescent probe that adopted primer and antisense primer each 0.225 μ l, 10 μ M are arranged of solution, 0.025 μ l (5units/ μ l) Taq archaeal dna polymerase, 20 μ M and each 0.25 μ l of band FAM fluorescent probe, deionized water 5.325 μ l.
React on the pcr amplification instrument, reaction conditions is 50 ℃, 2 minutes, 95 ℃, 10 minutes, carries out 95 ℃ of 60 round-robin, 30 seconds, 60 ℃, 1 minute.Reaction finishes the back and read the fluorescent amount on quantitative real time PCR Instrument.
Step 4: gene type assay
According to the gene type diagram that the test kit working instructions indicate gene type assay is carried out in the SNP site.
The those skilled in the art that are familiar with fluorescent quantitative PCR technique can be by the final sample fluorescence volume that shows on the identification quantitative real time PCR Instrument, can determine the genotype in the SNP site detected according to the power of different sequence fluorescence probe signals.