CA2499412A1 - Procede de calcul permettant de predire des interactions intramoleculaires et intermoleculaires entre des biopolymeres - Google Patents
Procede de calcul permettant de predire des interactions intramoleculaires et intermoleculaires entre des biopolymeres Download PDFInfo
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- CA2499412A1 CA2499412A1 CA002499412A CA2499412A CA2499412A1 CA 2499412 A1 CA2499412 A1 CA 2499412A1 CA 002499412 A CA002499412 A CA 002499412A CA 2499412 A CA2499412 A CA 2499412A CA 2499412 A1 CA2499412 A1 CA 2499412A1
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Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
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- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Medical Informatics (AREA)
- General Health & Medical Sciences (AREA)
- Theoretical Computer Science (AREA)
- Biophysics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Evolutionary Biology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Biotechnology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Analytical Chemistry (AREA)
- Chemical & Material Sciences (AREA)
- Bioethics (AREA)
- Genetics & Genomics (AREA)
- Artificial Intelligence (AREA)
- Molecular Biology (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Data Mining & Analysis (AREA)
- Databases & Information Systems (AREA)
- Epidemiology (AREA)
- Evolutionary Computation (AREA)
- Public Health (AREA)
- Software Systems (AREA)
- Management, Administration, Business Operations System, And Electronic Commerce (AREA)
Abstract
L'invention concerne un procédé de calcul permettant de prédire des interactions intramoléculaires et intermoléculaires entre des biopolymères, qui consiste en une manière améliorée de déterminer une structure et des informations de fonction, ces interactions intramoléculaires et intermoléculaires utilisant une approche du type ab initio, c'est-à-dire utilisant uniquement des informations de séquence. Ledit procédé peut largement s'appliquer à un outil d'exploitation de séquence capable de détecter à la fois des interactions intramoléculaires et des interactions intermoléculaires pour tous les biopolymères, notamment, un ADN, un ARN et une protéine. Il inclue un processus de criblage adaptatif permettant d'obtenir une précision élevée. Il peut consister en une méthodologie totalement sans de règles et impartiale, et permet donc de détecter de nouvelles interactions pour tous les biopolymères. Du fait de l'incorporation d'un processus de désalignement, ledit procédé peut s'utiliser de manière itérative, et est capable de redéfinir ses propres prédictions et de détecter et de gérer des erreurs. Le procédé décrit peut également fournir une technique permettant de déterminer de manière plus précise (et de redéfinir) des alignements de séquences.
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| PCT/US2002/030656 WO2004027540A2 (fr) | 2002-09-23 | 2002-09-23 | Procede de calcul permettant de predire des interactions intramoleculaires et intermoleculaires entre des biopolymeres |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA2499412A1 true CA2499412A1 (fr) | 2004-04-01 |
Family
ID=32028467
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA002499412A Abandoned CA2499412A1 (fr) | 2002-09-23 | 2002-09-23 | Procede de calcul permettant de predire des interactions intramoleculaires et intermoleculaires entre des biopolymeres |
Country Status (3)
| Country | Link |
|---|---|
| AU (1) | AU2002334688A1 (fr) |
| CA (1) | CA2499412A1 (fr) |
| WO (1) | WO2004027540A2 (fr) |
Family Cites Families (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1993001484A1 (fr) * | 1991-07-11 | 1993-01-21 | The Regents Of The University Of California | Methode permettant d'identifier des sequences de proteines qui se plient pour former une structure en trois dimensions connue |
| US5453937A (en) * | 1993-04-28 | 1995-09-26 | Immunex Corporation | Method and system for protein modeling |
| US5878373A (en) * | 1996-12-06 | 1999-03-02 | Regents Of The University Of California | System and method for determining three-dimensional structure of protein sequences |
-
2002
- 2002-09-23 WO PCT/US2002/030656 patent/WO2004027540A2/fr not_active Application Discontinuation
- 2002-09-23 CA CA002499412A patent/CA2499412A1/fr not_active Abandoned
- 2002-09-23 AU AU2002334688A patent/AU2002334688A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| WO2004027540A2 (fr) | 2004-04-01 |
| WO2004027540A3 (fr) | 2005-03-24 |
| AU2002334688A1 (en) | 2004-04-08 |
| AU2002334688A8 (en) | 2004-04-08 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FZDE | Discontinued |