CA2368007A1 - Composition for patient sample preparation - Google Patents
Composition for patient sample preparation Download PDFInfo
- Publication number
- CA2368007A1 CA2368007A1 CA002368007A CA2368007A CA2368007A1 CA 2368007 A1 CA2368007 A1 CA 2368007A1 CA 002368007 A CA002368007 A CA 002368007A CA 2368007 A CA2368007 A CA 2368007A CA 2368007 A1 CA2368007 A1 CA 2368007A1
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- CA
- Canada
- Prior art keywords
- composition
- amino
- salt
- mixtures
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- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/5306—Improving reaction conditions, e.g. reduction of non-specific binding, promotion of specific binding
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- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Immunology (AREA)
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Hematology (AREA)
- Urology & Nephrology (AREA)
- Biomedical Technology (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Analytical Chemistry (AREA)
- Biotechnology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- Physics & Mathematics (AREA)
- Cell Biology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Peptides Or Proteins (AREA)
Abstract
The object of the present invention is to claim a composition which when add ed to a patient sample containing a target antigen in an acidic or formalin- containing transport medium neutralizes the acid and formalin while preservi ng immunoreactivity of the antigen allowing its detection. The composition comprises an amino glycol buffer, an amino acid, a salt, and a non-ionic detergent. A further object of the present invention is to claim a method of processing a sample by adding a composition comprising an amino glycol buffe r, an amino acid, a salt, and a non-ionic detergent.
Description
COMPOSITION FOR PATIENT SAMPLE PREPARATION
Background of the Invention Enteric stool specimens are frequently collected in a 10% formalin or sodium acetate-acetic acid-formalin (SAF) transport medium which serves to 1 o inactivate the infectivity and preserve the morphology of parasitic organisms in the sample. These media may have adverse effects on the function of antibodies in diagnostic immunoassays.
Formalin, also known as formaldehyde, binds to amino groups on proteins, potentially altering their structure and functional activity. Low pH, 15 such as from the acetic acid in SAF, is inhibitory to antigen-antibody binding.
The development of an effective diagnostic immunoassay for enteric stool specimens collected in formalin or SAF, therefore, depends on the ability to counteract these adverse effects. Although some microwell and flow-through enzyme immunoassays appear to accomplish this through sample dilution, 2o simpler and more effective approaches are needed.
Summary of the Invention The object of the present invention is to claim a composition which when added to a patient sample containing a target antigen in an acidic or formalin-containing transport medium neutralizes the acid and formalin while preserving 2s immunoreactivity of the antigen allowing its detection. The composition comprises an amino glycol buffer, an amino acid, a salt, and a non-ionic detergent.
A further object of the present invention is to claim a method of processing a sample by adding a composition comprising an amino glycol buffer, 3o an amino acid, a salt, and a non-ionic detergent.
Detailed Description of the Invention The present invention is based on the discovery that a composition comprising an amino glycol buffer, an amino acid, a salt, and a non-ionic detergent can, when added to a patient sample containing a target antigen in an acidic or formalin-containing transport medium, allow for the neutralization of the acid and formalin while preserving immunoreactivity of the antigen allowing its detection.
The composition of the present invention includes an amino glycol buffer.
Suitable amino gylcol buffers include 2-amino-2hydroxymethyl-1,3-propanediol to (Tris buffer), 2-amino-2-methyl-1,3-propanediol.
The present composition further includes an amino acid. Suitable amino acids include glycine, lysine and arginine.
The composition further includes a salt. Suitable salts include sodium salts such as sodium chloride and potassium salts such as 1s potassium chloride.
The composition of the present invention further includes a non-ionic detergent. Suitable non-ionic detergents include polyoxyethylenes such as t-octylphenoxypolyethoxyethanol (Triton X-100) and (octylphenoxyl)-polyethoxyethanol (Nonidet P-40).
2o The composition of the present invention may further include serum. It is believed that serum serves to prevent or reduce non-specific binding of antibodies that may be subsequently used in an immunoassay when non-specific binding is a problem. Suitable serums include normal mammalian serum of any kind, such as that derived from humans. Other mammalian serums include 2s bovine, porcine, equine and murine.
Formulation:
The key elements of the treatment buffer formulation are the use of an amino acid in a basic buffer medium. We have selected glycine as the amino acid, and Tris base as the basic buffer . Also included in the treatment buffer is 3o some detergent, Triton X-100, which appears to help extract antigens relevant to our specific assay from the stool matrix, sodium chloride to help mimic physiological salt conditions which are theoretically ideal for antigen-antibody binding to occur, and sodium azide, which is added as an anti-microbial preservative. In addition, normal bovine serum was added to block non-specific binding.
The final formulation consists of 1 M Tris, 1 M glycine, 0.9% sodium chloride, 0.5% Triton X-100, and 0.01% sodium azide. The sources of the chemicals we have used to develop the treatment buffer are the Sigma Chemical to Company (St. Louis, Mo USA) and the J.T. Baker Chemical Company (Phillipsburg, NJ USA). The vendor catalog numbers are: Tris Base (also known as Trizma Base), Sigma T-1503; Glycine, Sigma G-7126; Sodium chloride, Baker 3624-07; Triton X-100, Sigma T-6878; and Sodium azide, Sigma S-2002. These chemicals are standard grade materials and we have no reason to believe that is other sources of these chemicals would not be equally as effective.
Eff~:
The need for a treatment buffer became apparent during our early development work on lateral flow immunoassays where a stool specimens was the patient sample being tested. It was noted that 10% formalin or SAF when 2o run directly in our lateral flow assays severely weakened or completely eliminated the development of test and control lines.
Therefore, tests were run in an attempt to eliminate the interference caused by formalin using a Group A Streptococcus assay (Rapid Strep A test, Genzyme Diagnostics, San Carlos, California) and an Infectious Mononucleosis 25 assay (Rapid Mono test, Genzyme Diagnostics), both lateral flow assays. We discovered that formalin or SAF did not cause an antibody-specific inhibition of signal, but was a more generalized phenomenon that would be applicable to many different immunoassays of this type.
Initially, after demonstrating that adding various types of carrier proteins 3o was relatively ineffective in counteracting formalin, glycine was tried and shown to be effective. However when SAF-treated stool samples were tested, significant inhibitory effects on signal were still observed. It appears that this inhibition was caused by the presence of acetic acid, which made the samples rather acidic in pH. When Tris base was added to such samples, signal was restored.
The data shown in the table below illustrates the suppressive effects of SAF on control line signal development in a lateral flow assay. These assays utilize goat anti-mouse IgG antibody striped onto a membrane, which in turn to captures a particulate-labeled mouse IgG antibody to generate a visible signal.
As shown, the use of the sample treatment buffer (STB) restores the control line signal to approximately the same intensity as the control level.
Table Sample Device Control Line Intensity Control (water) ++++
Without STB (SAF + water) -With STB (SAF + STB ++++
In the above experiments, no formal incubation time was used. The treatment buffer was added immediately prior to pipeting the sample into the test devices.
The chemical reactions, which neutralize formalin and acid occur quickly and functionally, can be thought of as instantaneous. It is possible that additional 2o neutralization may take place as the sample is flowing in the device.
Background of the Invention Enteric stool specimens are frequently collected in a 10% formalin or sodium acetate-acetic acid-formalin (SAF) transport medium which serves to 1 o inactivate the infectivity and preserve the morphology of parasitic organisms in the sample. These media may have adverse effects on the function of antibodies in diagnostic immunoassays.
Formalin, also known as formaldehyde, binds to amino groups on proteins, potentially altering their structure and functional activity. Low pH, 15 such as from the acetic acid in SAF, is inhibitory to antigen-antibody binding.
The development of an effective diagnostic immunoassay for enteric stool specimens collected in formalin or SAF, therefore, depends on the ability to counteract these adverse effects. Although some microwell and flow-through enzyme immunoassays appear to accomplish this through sample dilution, 2o simpler and more effective approaches are needed.
Summary of the Invention The object of the present invention is to claim a composition which when added to a patient sample containing a target antigen in an acidic or formalin-containing transport medium neutralizes the acid and formalin while preserving 2s immunoreactivity of the antigen allowing its detection. The composition comprises an amino glycol buffer, an amino acid, a salt, and a non-ionic detergent.
A further object of the present invention is to claim a method of processing a sample by adding a composition comprising an amino glycol buffer, 3o an amino acid, a salt, and a non-ionic detergent.
Detailed Description of the Invention The present invention is based on the discovery that a composition comprising an amino glycol buffer, an amino acid, a salt, and a non-ionic detergent can, when added to a patient sample containing a target antigen in an acidic or formalin-containing transport medium, allow for the neutralization of the acid and formalin while preserving immunoreactivity of the antigen allowing its detection.
The composition of the present invention includes an amino glycol buffer.
Suitable amino gylcol buffers include 2-amino-2hydroxymethyl-1,3-propanediol to (Tris buffer), 2-amino-2-methyl-1,3-propanediol.
The present composition further includes an amino acid. Suitable amino acids include glycine, lysine and arginine.
The composition further includes a salt. Suitable salts include sodium salts such as sodium chloride and potassium salts such as 1s potassium chloride.
The composition of the present invention further includes a non-ionic detergent. Suitable non-ionic detergents include polyoxyethylenes such as t-octylphenoxypolyethoxyethanol (Triton X-100) and (octylphenoxyl)-polyethoxyethanol (Nonidet P-40).
2o The composition of the present invention may further include serum. It is believed that serum serves to prevent or reduce non-specific binding of antibodies that may be subsequently used in an immunoassay when non-specific binding is a problem. Suitable serums include normal mammalian serum of any kind, such as that derived from humans. Other mammalian serums include 2s bovine, porcine, equine and murine.
Formulation:
The key elements of the treatment buffer formulation are the use of an amino acid in a basic buffer medium. We have selected glycine as the amino acid, and Tris base as the basic buffer . Also included in the treatment buffer is 3o some detergent, Triton X-100, which appears to help extract antigens relevant to our specific assay from the stool matrix, sodium chloride to help mimic physiological salt conditions which are theoretically ideal for antigen-antibody binding to occur, and sodium azide, which is added as an anti-microbial preservative. In addition, normal bovine serum was added to block non-specific binding.
The final formulation consists of 1 M Tris, 1 M glycine, 0.9% sodium chloride, 0.5% Triton X-100, and 0.01% sodium azide. The sources of the chemicals we have used to develop the treatment buffer are the Sigma Chemical to Company (St. Louis, Mo USA) and the J.T. Baker Chemical Company (Phillipsburg, NJ USA). The vendor catalog numbers are: Tris Base (also known as Trizma Base), Sigma T-1503; Glycine, Sigma G-7126; Sodium chloride, Baker 3624-07; Triton X-100, Sigma T-6878; and Sodium azide, Sigma S-2002. These chemicals are standard grade materials and we have no reason to believe that is other sources of these chemicals would not be equally as effective.
Eff~:
The need for a treatment buffer became apparent during our early development work on lateral flow immunoassays where a stool specimens was the patient sample being tested. It was noted that 10% formalin or SAF when 2o run directly in our lateral flow assays severely weakened or completely eliminated the development of test and control lines.
Therefore, tests were run in an attempt to eliminate the interference caused by formalin using a Group A Streptococcus assay (Rapid Strep A test, Genzyme Diagnostics, San Carlos, California) and an Infectious Mononucleosis 25 assay (Rapid Mono test, Genzyme Diagnostics), both lateral flow assays. We discovered that formalin or SAF did not cause an antibody-specific inhibition of signal, but was a more generalized phenomenon that would be applicable to many different immunoassays of this type.
Initially, after demonstrating that adding various types of carrier proteins 3o was relatively ineffective in counteracting formalin, glycine was tried and shown to be effective. However when SAF-treated stool samples were tested, significant inhibitory effects on signal were still observed. It appears that this inhibition was caused by the presence of acetic acid, which made the samples rather acidic in pH. When Tris base was added to such samples, signal was restored.
The data shown in the table below illustrates the suppressive effects of SAF on control line signal development in a lateral flow assay. These assays utilize goat anti-mouse IgG antibody striped onto a membrane, which in turn to captures a particulate-labeled mouse IgG antibody to generate a visible signal.
As shown, the use of the sample treatment buffer (STB) restores the control line signal to approximately the same intensity as the control level.
Table Sample Device Control Line Intensity Control (water) ++++
Without STB (SAF + water) -With STB (SAF + STB ++++
In the above experiments, no formal incubation time was used. The treatment buffer was added immediately prior to pipeting the sample into the test devices.
The chemical reactions, which neutralize formalin and acid occur quickly and functionally, can be thought of as instantaneous. It is possible that additional 2o neutralization may take place as the sample is flowing in the device.
Claims (12)
1. A composition comprising an amino glycol buffer, an amino acid, a salt and a non-ionic detergent.
2. The composition of claim 1, wherein the amino glycol is selected from the group consisting of 2-amino-2hydroxymethyl-1,3-propanediol, 2-amino-2-methyl-1,3-propanediol, and mixtures thereof.
3. The composition of claim 1, wherein the amino acid is selected from the group consisting of glycine, lysine, arginine, and mixtures thereof.
4. The composition of claim 1, wherein the salt is selected from the group consisting of sodium salt, potassium salt, and mixtures thereof.
5. The composition of claim 1, wherein the non-ionic detergent is selected from the group consisting of t-octylphenoxypolyethoxyethanol (Triton X-100)(octylphenoxyl)-polyethoxyethanol (Nonidet P-40), and mixtures thereof.
6. The composition of claim 1, the composition further comprising a serum.
7. A method of processing a patient sample comprising the steps of:
(a) obtaining the patient sample containing a formaldehyde or an acidic transport medium;
(b) adding a composition comprising an amino glycol buffer, an amino acid, a salt and a non-ionic detergent.
(a) obtaining the patient sample containing a formaldehyde or an acidic transport medium;
(b) adding a composition comprising an amino glycol buffer, an amino acid, a salt and a non-ionic detergent.
8. The composition of claim 7, wherein the amino gycol is selected from the group consisting of 2-amino-2hydroxymethyl-1,3-propanediol, 2-amino-2-methyl-1,3-propanediol, and mixtures thereof.
9. The composition of claim 7, wherein the amino acid is selected from the group consisting of glycine, lysine, arginine and mixtures thereof.
10. The composition of claim 7, wherein the salt is selected from the group consisting of sodium salt, potassium salt, and mixtures thereof.
11. The composition of claim 7, wherein the non-ionic detergent is selected from the group consisting of t-octylphenoxypolyethoxyethanol (Triton X-100), (octylphenoxyl)-polyethoxyethanol (Nonidet P-40) and mixtures thereof.
12. The composition of claim 7, the composition further comprising a serum.
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| PCT/US1999/007573 WO2000060353A1 (en) | 1999-04-06 | 1999-04-06 | Composition for patient sample preparation |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA2368007A1 true CA2368007A1 (en) | 2000-10-12 |
Family
ID=22272513
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA002368007A Abandoned CA2368007A1 (en) | 1999-04-06 | 1999-04-06 | Composition for patient sample preparation |
Country Status (5)
| Country | Link |
|---|---|
| EP (1) | EP1166111A1 (en) |
| JP (1) | JP2002541456A (en) |
| AU (1) | AU3475299A (en) |
| CA (1) | CA2368007A1 (en) |
| WO (1) | WO2000060353A1 (en) |
Families Citing this family (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20070292884A1 (en) * | 2006-06-19 | 2007-12-20 | Becton, Dickinson And Company | Methods and compositions for obtaining amplifiable nucleic acids from tissues, cells, or viruses exposed to transport media |
| WO2011028887A2 (en) | 2009-09-03 | 2011-03-10 | Becton, Dickinson And Company | Methods and compositions for direct chemical lysis |
Family Cites Families (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5185264A (en) * | 1990-11-09 | 1993-02-09 | Abbott Laboratories | Diluent buffer and method for diluting an assay component |
| JPH06284886A (en) * | 1993-04-01 | 1994-10-11 | Amano Pharmaceut Co Ltd | Stabilization of enzyme in solution |
| US5695928A (en) * | 1993-12-10 | 1997-12-09 | Novartis Corporation | Rapid immunoassay for detection of antibodies or antigens incorporating simultaneous sample extraction and immunogenic reaction |
| US5958300A (en) * | 1998-02-06 | 1999-09-28 | Genzyme Corporation | Composition for patient sample preparation |
-
1999
- 1999-04-06 JP JP2000609792A patent/JP2002541456A/en not_active Withdrawn
- 1999-04-06 WO PCT/US1999/007573 patent/WO2000060353A1/en not_active Application Discontinuation
- 1999-04-06 EP EP99916432A patent/EP1166111A1/en not_active Withdrawn
- 1999-04-06 CA CA002368007A patent/CA2368007A1/en not_active Abandoned
- 1999-04-06 AU AU34752/99A patent/AU3475299A/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| JP2002541456A (en) | 2002-12-03 |
| EP1166111A1 (en) | 2002-01-02 |
| WO2000060353A1 (en) | 2000-10-12 |
| AU3475299A (en) | 2000-10-23 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FZDE | Discontinued |