CA2266423A1 - Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences - Google Patents

Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences Download PDF

Info

Publication number
CA2266423A1
CA2266423A1 CA002266423A CA2266423A CA2266423A1 CA 2266423 A1 CA2266423 A1 CA 2266423A1 CA 002266423 A CA002266423 A CA 002266423A CA 2266423 A CA2266423 A CA 2266423A CA 2266423 A1 CA2266423 A1 CA 2266423A1
Authority
CA
Canada
Prior art keywords
cells
viral
recombinant
viruses
dna
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002266423A
Other languages
English (en)
Inventor
Willem P.C. Stemmer
Frederick C. Christians
Shi-Kau Liu
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Maxygen Inc
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2266423A1 publication Critical patent/CA2266423A1/fr
Abandoned legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • C12N15/1027Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/16Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • A61K38/43Enzymes; Proenzymes; Derivatives thereof
    • A61K38/45Transferases (2)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1058Directional evolution of libraries, e.g. evolution of libraries is achieved by mutagenesis and screening or selection of mixed population of organisms
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N7/00Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/1003Transferases (2.) transferring one-carbon groups (2.1)
    • C12N9/1007Methyltransferases (general) (2.1.1.)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2710/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011Details
    • C12N2710/10011Adenoviridae
    • C12N2710/10041Use of virus, viral particle or viral elements as a vector
    • C12N2710/10043Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2795/00Bacteriophages
    • C12N2795/00011Details
    • C12N2795/14011Details ssDNA Bacteriophages
    • C12N2795/14111Inoviridae
    • C12N2795/14141Use of virus, viral particle or viral elements as a vector
    • C12N2795/14143Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector

Abstract

L'invention concerne des procédés de mise au point d'acides nucléiques destinés à être utilisés dans une thérapie génique grâce à une recombinaison récursive de séquences. Beaucoup de ces procédés mettent au point des vecteurs aussi bien viraux que non viraux, afin de présenter des propriétés perfectionnées. Par exemple, des vecteurs sont mis au point pour présenter des propriétés perfectionnées de titres viraux, d'infectivité, d'expression d'un gène dans un vecteur, de spécificité de tissu, de capacité de génome viral, de rétention épisomique, de manque d'immunogénicité des vecteurs ou d'un produit d'expression de ces vecteurs, d'intégration spécifique du milieu, de stabilité accrue, ou de capacité à conférer une résistance cellulaire à une infection causée par des micro-organismes. L'invention concerne également un adénovirus-phagémide susceptible de générer un ADN à un brin supérieur à 10 kilobases comprenant un adénovirus et une origine de réplication en phage f1.
CA002266423A 1996-09-27 1997-09-26 Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences Abandoned CA2266423A1 (fr)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US3774296P 1996-09-27 1996-09-27
US72266096A 1996-09-27 1996-09-27
US08/722,660 1996-09-27
US60/037,742 1996-09-27
PCT/US1997/017300 WO1998013487A1 (fr) 1996-09-27 1997-09-26 Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences

Publications (1)

Publication Number Publication Date
CA2266423A1 true CA2266423A1 (fr) 1998-04-02

Family

ID=26714441

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002266423A Abandoned CA2266423A1 (fr) 1996-09-27 1997-09-26 Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences

Country Status (5)

Country Link
EP (1) EP0964922A4 (fr)
JP (1) JP2001504325A (fr)
AU (1) AU4503797A (fr)
CA (1) CA2266423A1 (fr)
WO (1) WO1998013487A1 (fr)

Families Citing this family (67)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6309883B1 (en) 1994-02-17 2001-10-30 Maxygen, Inc. Methods and compositions for cellular and metabolic engineering
US20060257890A1 (en) 1996-05-20 2006-11-16 Maxygen, Inc. Methods and compositions for cellular and metabolic engineering
US6358709B1 (en) 1995-12-07 2002-03-19 Diversa Corporation End selection in directed evolution
US6939689B2 (en) 1995-12-07 2005-09-06 Diversa Corporation Exonuclease-mediated nucleic acid reassembly in directed evolution
US6238884B1 (en) 1995-12-07 2001-05-29 Diversa Corporation End selection in directed evolution
US6713279B1 (en) 1995-12-07 2004-03-30 Diversa Corporation Non-stochastic generation of genetic vaccines and enzymes
US5830696A (en) 1996-12-05 1998-11-03 Diversa Corporation Directed evolution of thermophilic enzymes
US6740506B2 (en) 1995-12-07 2004-05-25 Diversa Corporation End selection in directed evolution
US6326204B1 (en) 1997-01-17 2001-12-04 Maxygen, Inc. Evolution of whole cells and organisms by recursive sequence recombination
CA2276064C (fr) 1997-01-17 2013-12-17 Maxygen, Inc. Evolution de cellules entieres et d'organismes par recombinaison recursive de sequences
US6602677B1 (en) * 1997-09-19 2003-08-05 Promega Corporation Thermostable luciferases and methods of production
WO1999021979A1 (fr) 1997-10-28 1999-05-06 Maxygen, Inc. Vecteurs du papillomavirus humain
AU1449499A (en) 1997-10-31 1999-05-24 Maxygen, Incorporated Modification of virus tropism and host range by viral genome shuffling
US6468745B1 (en) 1998-01-16 2002-10-22 Large Scale Biology Corporation Method for expressing a library of nucleic acid sequence variants and selecting desired traits
US6426185B1 (en) 1998-01-16 2002-07-30 Large Scale Biology Corporation Method of compiling a functional gene profile in a plant by transfecting a nucleic acid sequence of a donor plant into a different host plant in an anti-sense orientation
US6303848B1 (en) 1998-01-16 2001-10-16 Large Scale Biology Corporation Method for conferring herbicide, pest, or disease resistance in plant hosts
BR9910174A (pt) 1998-05-01 2001-03-06 Maxygen Inc Processo para se obter um gene recombinante otimizado de resistência à praga, biblioteca, e, processo para se obter um organismo que seja patogênico a uma praga de vegetal
KR20010052894A (ko) 1998-06-17 2001-06-25 맥시겐, 인크. 목적하는 특성을 보유한 폴리뉴클레오티드를 생성하는 방법
WO2000009682A1 (fr) 1998-08-12 2000-02-24 Maxygen, Inc. Rearrangement d'adn de genes de monoxygenase en vue de la production de produits chimiques industriels
EP1119616A2 (fr) 1998-10-07 2001-08-01 Maxygen, Inc. Rearrangement d'adn pour produire des acides nucleiques de detoxication contre les mycotoxines
GB9823468D0 (en) 1998-10-28 1998-12-23 Secr Defence Novel enzyme
WO2000028018A1 (fr) 1998-11-10 2000-05-18 Maxygen, Inc. Adp-glucose pyrophosphorylase modifiee pour l'amelioration et l'optimisation de phenotypes vegetaux
US6358712B1 (en) 1999-01-05 2002-03-19 Trustee Of Boston University Ordered gene assembly
US6917882B2 (en) 1999-01-19 2005-07-12 Maxygen, Inc. Methods for making character strings, polynucleotides and polypeptides having desired characteristics
US6436675B1 (en) 1999-09-28 2002-08-20 Maxygen, Inc. Use of codon-varied oligonucleotide synthesis for synthetic shuffling
US6376246B1 (en) 1999-02-05 2002-04-23 Maxygen, Inc. Oligonucleotide mediated nucleic acid recombination
US6961664B2 (en) 1999-01-19 2005-11-01 Maxygen Methods of populating data structures for use in evolutionary simulations
AU3210200A (en) 1999-01-19 2000-08-01 Maxygen, Inc. Oligonucleotide mediated nucleic acid recombination
US7024312B1 (en) 1999-01-19 2006-04-04 Maxygen, Inc. Methods for making character strings, polynucleotides and polypeptides having desired characteristics
CA2361384A1 (fr) 1999-02-11 2000-08-17 Sun Ai Raillard Spectrometrie de masse a haut rendement
US6531316B1 (en) 1999-03-05 2003-03-11 Maxyag, Inc. Encryption of traits using split gene sequences and engineered genetic elements
AU3879300A (en) * 1999-03-09 2000-09-28 Diversa Corporation End selection in directed evolution
CA2380872C (fr) 1999-08-12 2007-11-27 Yan Chen Gene de streptomyces avermitilis commandant le rapport d'avermectines b2/b1
US7430477B2 (en) 1999-10-12 2008-09-30 Maxygen, Inc. Methods of populating data structures for use in evolutionary simulations
GB9925161D0 (en) 1999-10-26 1999-12-22 Secr Defence Novel enzyme
US6686515B1 (en) 1999-11-23 2004-02-03 Maxygen, Inc. Homologous recombination in plants
AU1800401A (en) * 1999-11-23 2001-06-04 Maxygen, Inc. Shuffling of agrobacterium and viral genes, plasmids and genomes for improved plant transformation
US7115712B1 (en) 1999-12-02 2006-10-03 Maxygen, Inc. Cytokine polypeptides
EP1254212A2 (fr) 2000-02-09 2002-11-06 Genvec, Inc. Methodes de preparation et d'utilisation d'une bibliotheque de vecteurs viraux
AU2001239244B2 (en) 2000-02-09 2006-06-08 Basf Aktiengesellschaft Novel elongase gene and method for producing multiple-unsaturated fatty acids
WO2001073000A2 (fr) * 2000-03-24 2001-10-04 Maxygen, Inc. Procedes de modulation de phenotypes cellulaires et organismiques
CN1328144A (zh) * 2000-06-12 2001-12-26 上海博德基因开发有限公司 一种新的多肽——甲基化-dna-蛋白-半胱氨酸甲基转移酶10和编码这种多肽的多核苷酸
WO2002000717A2 (fr) 2000-06-23 2002-01-03 Maxygen, Inc. Nouvelles molecules costimulatrices
EP1297146A2 (fr) 2000-06-23 2003-04-02 Maxygen, Inc. Nouveaux promoteurs chimeres
US6858422B2 (en) 2000-07-13 2005-02-22 Codexis, Inc. Lipase genes
US7879540B1 (en) 2000-08-24 2011-02-01 Promega Corporation Synthetic nucleic acid molecule compositions and methods of preparation
AU8847801A (en) 2000-08-25 2002-03-04 Basf Plant Science Gmbh Plant polynucleotides encoding novel prenyl proteases
GB0107510D0 (en) 2001-03-26 2001-05-16 Univ Bristol New elongase gene and a process for the production of -9-polyunsaturated fatty acids
US20030129203A1 (en) * 2001-08-27 2003-07-10 Nautilus Biotech S.A. Mutant recombinant adeno-associated viruses
US7647184B2 (en) 2001-08-27 2010-01-12 Hanall Pharmaceuticals, Co. Ltd High throughput directed evolution by rational mutagenesis
CA2498319A1 (fr) 2002-09-09 2004-03-18 Nautilus Biotech Evolution rationnelle de cytokines pour une plus grande stabilite, les cytokines et molecules d'acide nucleique codant
BRPI0409816B8 (pt) 2003-04-29 2022-12-06 Pioneer Hi Bred Int Genes de glifosato-n-acetiltransferase (gat), construtos os compreendendo, célula bacteriana, polipeptídeo tendo atividade de gat, bem como método para a produção de uma planta transgênica resistente ao glifosato e métodos para controlar ervas daninhas em um campo contendo uma safra
US7354734B2 (en) 2003-08-25 2008-04-08 Funzyme Biotechnologies Sa Fungal proteins and nucleic acids encoding same
WO2005085431A2 (fr) * 2004-03-02 2005-09-15 Epfl Ecole Polytechnique Federale De Lausanne Mutants de o6-alkylguanine-adn alkyltransferase
CA2734716A1 (fr) 2004-06-09 2005-12-29 Pioneer Hi-Bred International, Inc. Peptides de transit vers des plastes
US7728118B2 (en) 2004-09-17 2010-06-01 Promega Corporation Synthetic nucleic acid molecule compositions and methods of preparation
US8715988B2 (en) 2005-03-28 2014-05-06 California Institute Of Technology Alkane oxidation by modified hydroxylases
US7572618B2 (en) 2006-06-30 2009-08-11 Bristol-Myers Squibb Company Polynucleotides encoding novel PCSK9 variants
CA2723427C (fr) 2008-05-23 2018-01-23 E. I. Du Pont De Nemours And Company Nouveaux genes dgat permettant d'obtenir une production accrue de lipides de stockage de semences et des profils modifies d'acides gras dans des plantes a graines oleagineuses
CN105624193B (zh) 2008-09-26 2021-07-13 索元生物医药(美国)有限公司 重组载体
MX2012002113A (es) 2009-08-20 2012-08-08 Pioneer Hi Bred Int Expresion funcional del transportador de nitrato de levadura entremezclado (ynti) en el maiz para mejorar la captacion de nitrato bajo ambiente de bajo contenido de nitrato.
MX2012007681A (es) 2009-12-31 2013-01-29 Pioneer Hi Bred Int Ingenieria de resistencia de plantas a enfermedades causadas por patogenos.
EP2603591A1 (fr) 2010-08-13 2013-06-19 Pioneer Hi-Bred International Inc. Procédés et compositions comprenant des séquences présentant une activité d'hydroxyphénylpyruvate dioxygénase (hppd)
WO2013166113A1 (fr) 2012-05-04 2013-11-07 E. I. Du Pont De Nemours And Company Compositions et procédés comprenant des séquences ayant une activité de méganucléase
BR112015023286A2 (pt) 2013-03-14 2018-03-06 Arzeda Corp polipeptídeo recombinante com atividade da dicamba descarboxilase, construto de polinucleotídeo, célula, método de produção de uma célula hospedeira compreendendo um polinucleotídeo heterólogo que codifica um polipeptídeo tendo atividade da dicamba descarboxilase, método para descarboxilar dicamba, um derivado de dicamba ou um metabolito de dicamba, método para a detecção de um polipeptideo e método para a detecção da presença de um polinucleotideo que codifica um polipeptideo tendo atividade da dicamba descarboxilase
US20140287419A1 (en) 2013-03-14 2014-09-25 Arzeda Corp. Compositions Having Dicamba Decarboxylase Activity and Methods of Use
EP3191600A1 (fr) 2014-09-11 2017-07-19 Promega Corporation Substrats émettant dans l'infrarouge utilisant des séquences de luciférase pour produire une luminescence augmentée

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6096548A (en) * 1996-03-25 2000-08-01 Maxygen, Inc. Method for directing evolution of a virus

Also Published As

Publication number Publication date
JP2001504325A (ja) 2001-04-03
WO1998013487A1 (fr) 1998-04-02
AU4503797A (en) 1998-04-17
EP0964922A4 (fr) 2000-10-25
EP0964922A1 (fr) 1999-12-22

Similar Documents

Publication Publication Date Title
CA2266423A1 (fr) Procedes permettant l'optimisation d'une therapie genique grace a un rearrangement et une selection recursifs de sequences
WO1998013485A1 (fr) Procedes permettant l'optimisation de la therapie genique grace a un rearrangement et une selection recursifs de sequences
US11753643B2 (en) Gene vector
JP3681752B2 (ja) 遺伝子治療に使用できる宿主 − ベクタ系
Thomas et al. Progress and problems with the use of viral vectors for gene therapy
US6596539B1 (en) Modification of virus tropism and host range by viral genome shuffling
JP4206154B2 (ja) 変異型loxP配列とその応用
KR20160056869A (ko) 바이러스 구성성분을 사용하여 장애 및 질환을 표적화하기 위한 crispr-cas 시스템 및 조성물의 전달, 용도 및 치료 적용
KR20160019553A (ko) 유사분열 후 세포의 질병 및 장애를 표적화하고 모델링하기 위한 시스템, 방법 및 조성물의 전달, 유전자 조작 및 최적화
KR20150105956A (ko) 서열 조작 및 치료적 적용을 위한 시스템, 방법 및 조성물의 전달, 유전자 조작 및 최적화
JPH09509578A (ja) 組み込み可能な組み換えアデノウィルス、それらの製造及びそれらの治療的利用
CA2932479A1 (fr) Relargage, utilisation et applications therapeutiques de systemes crispr-cas et compositions pour maladies et troubles viraux et attribuables au vhb
EP3237615A1 (fr) Crispr présentant ou associé avec un domaine de déstabilisation
WO2016094867A1 (fr) Arn guides protégés (pgrnas)
KR20160030187A (ko) 간의 표적화 및 치료를 위한 CRISPR­Cas 시스템, 벡터 및 조성물의 전달 및 용도
JP2006516403A (ja) カスタムメイドメガヌクレアーゼおよびその使用
FR2707091A1 (fr) Vecteur rétroviral pour le transfert et l'expression de gènes dans des cellules eucaryotes.
WO1995026411A2 (fr) Composition et methodes d'obtention de cellules productrices de virus de recombinaison isogeniques
KR20220155981A (ko) 미성숙 종결 코돈-매개 장애를 치료하기 위한 방법 및 조성물
US8088621B2 (en) Adenoviral fiber exchange shuttle system
Boulikas Status of gene therapy in 1997: molecular mechanisms, disease targets, and clinical applications
CZ296600B6 (cs) Virový vektor obsahující replikující se DNA, zpusob prípravy této DNA a farmaceutická kompozice obsahující virový vektor
JP4159620B2 (ja) 組換えアデノウイルスの製造方法
Miah CRISPR/Cas9 genome editing for the generation of YB1 knockout human and insect cell lines for the production of recombinant Adeno-associated virus vectors
van Winkel CRAd with capsid incorporated mesothelin for higher anti-tumor immunization

Legal Events

Date Code Title Description
FZDE Discontinued