CA2185340C - Expression of bacillus thuringiensis cry proteins in plant plastids - Google Patents
Expression of bacillus thuringiensis cry proteins in plant plastids Download PDFInfo
- Publication number
- CA2185340C CA2185340C CA002185340A CA2185340A CA2185340C CA 2185340 C CA2185340 C CA 2185340C CA 002185340 A CA002185340 A CA 002185340A CA 2185340 A CA2185340 A CA 2185340A CA 2185340 C CA2185340 C CA 2185340C
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- plant
- plastid
- construct
- toxin
- bacillus thuringiensis
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Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/195—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
- C07K14/32—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Bacillus (G)
- C07K14/325—Bacillus thuringiensis crystal peptides, i.e. delta-endotoxins
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8201—Methods for introducing genetic material into plant cells, e.g. DNA, RNA, stable or transient incorporation, tissue culture methods adapted for transformation
- C12N15/8214—Plastid transformation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8271—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance
- C12N15/8279—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance
- C12N15/8286—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for stress resistance, e.g. heavy metal resistance for biotic stress resistance, pathogen resistance, disease resistance for insect resistance
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A40/00—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production
- Y02A40/10—Adaptation technologies in agriculture, forestry, livestock or agroalimentary production in agriculture
- Y02A40/146—Genetically Modified [GMO] plants, e.g. transgenic plants
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- Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Biotechnology (AREA)
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- General Engineering & Computer Science (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Microbiology (AREA)
- Cell Biology (AREA)
- Physics & Mathematics (AREA)
- Crystallography & Structural Chemistry (AREA)
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Abstract
Novel compositions and methods useful for genetic engineering of plant cells to provide increased expression in the plastids of a plant or plant cell of the Bacillus thuringiensis insecticidal protein.
Description
EXPRESSION OF BACILLDS THiTRINGIEN5IS
CRY PROTEINS IN PLANT PLASTIDS
INTRODVCTION
Field of the invention This invention relates to the application of genetic engineering techniquesto plants. More specifically, the invention relates to compositions and methods expressing insecticidal Bacillus thuringiensis toxin proteins in plant plastids.
Backaround Plastids of higher plants, i.e. chloroplasts, amyloplasts and chromoplasts, have the same genetic content, and thus are believed to be derived from a common precursor, known as a proplastid. The plastid genome is circular and varies in size among plant species from about 120 to about 217 kilobase pairs (kb). The genome typically includes a large inverted repeat, which can contain up to about 76 kilobase pairs, but which is more typically in the range of about 20 to about 30 kilobase pairs. The inverted repeat present in the plastid genome of various organisms has been described (Palmer, J. D. (1990) Trends Genet.
6:115-120).
One advantage of plant plastid transformation over nuclear transformation;is that the plastids of most plants are maternally inherited, and consequently heterologous plastid genes are not pollen disseminated. This feature is particularly attractive for transgenic plants having altered agronomic traits, as introduced resistance or tolerance to natural or chemical conditions will not be transmitted to wild-type relatives.
SUBSTITUTE SHEET (RULE 26) Plant plastids are also major biosynthetic centers.
In addition to photosynthesisin chloroplasts, plastids are responsible for production of important compounds such as amino acids, complex carbohydrates, fatty acids, and pigments.
. :'.;
e Plastids can be present in a plant cell at a very high copy number, with up to 50,000 copies per cell present for the chloroplast genome (Bendich, A. J. (1987) BioEssays 6:279-282). Thus, through plastid transformation plant cells can be engineered to maintain an introduced gene of interest at a very high_copy number.
For all of the above reasons, the plastids of higher plants present an attractive target for genetic engineering. Stable transformation of plastids has been reported in the green algae Chlamydomonas (Boynton et al.
(1988) Science 240:1534-1538) and more recently in higher plants (Svab et al. (1990) Proc. Natl. Acad. Sci. USA
87:8526-8530: Svab and Maliga (1993) Proc. Natl. Acad. Sci.
USA 90:913-917); (Staub, J. M. and Maliga, P. (1993), EMBO
LT. 12:601-606). The method disclosed for plastid transformation in higher plants relies on particle gun delivery of DNA containing a selectable marker, and targeting of the DNA to the plastid genome through homologous recombination.
There is a continuing need to introduce newly discovered or alternative Bacillus thuringiensis genes into crop plants. Cry proteins (d-endotoxins) from Bacillus thuringiensis have potent insecticidal activity against a number of Lepidopteran, Dipteran, and Coleopteran insects.
These proteins are classified CryI to CryV, based on amino acid sequence homology and insecticidal activity. Most Cryl proteins are synthesized as protoxins (ca. 130-140 kDa) then solubilized and proteolytically processed into active toxin fragments (ca. 60-70 kDa).
SUBSTITUTE SHEET (RULE 26) The poor expression of the protoxin genes from the nucleus of plants has heretofore required the use of 'truncated' versions of these genes. The truncated versions code only for the active toxin fragments. Other attempts to increase the expression efficiency have included resynthesizing the Bacillus thuringiensis toxin genes to utilize plant preferred codons. Many problems can arise in such extensive reconstruction of these large cry genes (approximately 3.5 Kb), and the process is both laborious and expensive.
Problems can also arise as new insect pests become endemic, or as existing populations develop resistance to a particular level or type of Bacillus thuringiensis toxin.
Thus, there is a particular need for producing higher and thereby more effective levels of the Bacillus thuringiensis toxin in plants, a need which will only increase with time.
CRY PROTEINS IN PLANT PLASTIDS
INTRODVCTION
Field of the invention This invention relates to the application of genetic engineering techniquesto plants. More specifically, the invention relates to compositions and methods expressing insecticidal Bacillus thuringiensis toxin proteins in plant plastids.
Backaround Plastids of higher plants, i.e. chloroplasts, amyloplasts and chromoplasts, have the same genetic content, and thus are believed to be derived from a common precursor, known as a proplastid. The plastid genome is circular and varies in size among plant species from about 120 to about 217 kilobase pairs (kb). The genome typically includes a large inverted repeat, which can contain up to about 76 kilobase pairs, but which is more typically in the range of about 20 to about 30 kilobase pairs. The inverted repeat present in the plastid genome of various organisms has been described (Palmer, J. D. (1990) Trends Genet.
6:115-120).
One advantage of plant plastid transformation over nuclear transformation;is that the plastids of most plants are maternally inherited, and consequently heterologous plastid genes are not pollen disseminated. This feature is particularly attractive for transgenic plants having altered agronomic traits, as introduced resistance or tolerance to natural or chemical conditions will not be transmitted to wild-type relatives.
SUBSTITUTE SHEET (RULE 26) Plant plastids are also major biosynthetic centers.
In addition to photosynthesisin chloroplasts, plastids are responsible for production of important compounds such as amino acids, complex carbohydrates, fatty acids, and pigments.
. :'.;
e Plastids can be present in a plant cell at a very high copy number, with up to 50,000 copies per cell present for the chloroplast genome (Bendich, A. J. (1987) BioEssays 6:279-282). Thus, through plastid transformation plant cells can be engineered to maintain an introduced gene of interest at a very high_copy number.
For all of the above reasons, the plastids of higher plants present an attractive target for genetic engineering. Stable transformation of plastids has been reported in the green algae Chlamydomonas (Boynton et al.
(1988) Science 240:1534-1538) and more recently in higher plants (Svab et al. (1990) Proc. Natl. Acad. Sci. USA
87:8526-8530: Svab and Maliga (1993) Proc. Natl. Acad. Sci.
USA 90:913-917); (Staub, J. M. and Maliga, P. (1993), EMBO
LT. 12:601-606). The method disclosed for plastid transformation in higher plants relies on particle gun delivery of DNA containing a selectable marker, and targeting of the DNA to the plastid genome through homologous recombination.
There is a continuing need to introduce newly discovered or alternative Bacillus thuringiensis genes into crop plants. Cry proteins (d-endotoxins) from Bacillus thuringiensis have potent insecticidal activity against a number of Lepidopteran, Dipteran, and Coleopteran insects.
These proteins are classified CryI to CryV, based on amino acid sequence homology and insecticidal activity. Most Cryl proteins are synthesized as protoxins (ca. 130-140 kDa) then solubilized and proteolytically processed into active toxin fragments (ca. 60-70 kDa).
SUBSTITUTE SHEET (RULE 26) The poor expression of the protoxin genes from the nucleus of plants has heretofore required the use of 'truncated' versions of these genes. The truncated versions code only for the active toxin fragments. Other attempts to increase the expression efficiency have included resynthesizing the Bacillus thuringiensis toxin genes to utilize plant preferred codons. Many problems can arise in such extensive reconstruction of these large cry genes (approximately 3.5 Kb), and the process is both laborious and expensive.
Problems can also arise as new insect pests become endemic, or as existing populations develop resistance to a particular level or type of Bacillus thuringiensis toxin.
Thus, there is a particular need for producing higher and thereby more effective levels of the Bacillus thuringiensis toxin in plants, a need which will only increase with time.
SUNKARY OF THE INVENTION
Various embodiments of this invention provide a construct for expression in a plant plastid comprising (a) to (c) as follows, operably joined in the 51 to 31 direction: (a) a promoter functional in a plant plastid;
(b) a DNA sequence encoding an insecticidal Bacillus thuringiensis toxin; (c) a transcription termination region capable of terminating transcription in a plant plastid; the construct further comprising: (d) a gene encoding a marker construct for selection of plant cells comprising a plastid expressing said marker; and (e) DNA regions of homology to the genome of said plastid; wherein (a), (b), (c), and (d) of said construct are between said regions of homology in (e). Also provided is a plant cell plastid containing such a construct as well as plant cells and progeny cells thereof containing the construct.
Various embodiments of this invention provide a method for enhancing the expression of an insecticidal Bacillus thuringiensis toxin in a plant cell, wherein said method comprises expressing said Bacillus thuringiensis toxin in plastids of said plant cell, and wherein said toxin is expressed from a construct of this invention.
Various embodiments of this invention provide a transgenic plant cell exhibiting enhanced expression of an insecticidal Bacillus thuringiensis toxin, wherein said toxin is expressed from a construct of this invention and wherein said toxin is expressed in plastids of said plant cell.
By this invention, plastid expression constructs are provided which are useful for genetic engineering of plant 3a cells and which provide for enhanced expression of the Bacillus thuringiensis cry proteins in plant cell plastids.
The transformed plastids should be metabolically active plastids, and are preferably maintained at a high copy number in the plant tissue of interest, most preferably the chloroplasts found in green plant tissues, such as leaves or cotyledons.
The plastid expression constructs for use in this invention generally include a plastid promoter region, a DNA
sequence encoding a Bacillus thuringiensis cry protein, and a transcription termination region capable of terminating transcription in a plant plastid.
The plastid expression construct of this invention is preferably linked to a construct having a DNA sequence 3b encoding a selectable marker which can be expressed in a plant plastid. Expression of_the selectable marker allows the identification of plant cells comprising a plastid expressing the marker. -In a preferred embodiment, vectors for transfer-of the construct into a plant cell include means for inserting the expression and selection constructs into the plastid genome. This preferably comprises regions of homology to the target plastid genome which flank the constructs.
The construct of the invention preferrably comprise a native Bacillus thuringie.nsis DNA encoding seguence,-which_ may be a sequence encoding the protoxin. In a preferred embodiment, the-DNA encoding sequence is the csyIA(c) gene.
Plant cell plastids containing the construct are also contemplated in the invention, as are plants, plant seeds, plant cells or progeny thereof containing plastids -comprising the construct. A preferred plant for this purpose is cotton. - -The invention also includes a method for enhancing the expression of an insecticidal Bacillus thuringiensis toxin --in a plant cell, by expressing the Bacillus thuringiensis toxin in plastids of the plant cell. By this-method the expression is enhanced separate from that enhancement which occurs from the increased copy number in plastid - -transformation.
By this invention the insecticidal Bacillus thuringiensis toxin is produced in plastids of a plant cell from the native DNA encoding sequence, with enhanced levels of expression of an insect resistant phenotype, as measured ' by insect feeding assays.
Various embodiments of this invention provide a construct for expression in a plant plastid comprising (a) to (c) as follows, operably joined in the 51 to 31 direction: (a) a promoter functional in a plant plastid;
(b) a DNA sequence encoding an insecticidal Bacillus thuringiensis toxin; (c) a transcription termination region capable of terminating transcription in a plant plastid; the construct further comprising: (d) a gene encoding a marker construct for selection of plant cells comprising a plastid expressing said marker; and (e) DNA regions of homology to the genome of said plastid; wherein (a), (b), (c), and (d) of said construct are between said regions of homology in (e). Also provided is a plant cell plastid containing such a construct as well as plant cells and progeny cells thereof containing the construct.
Various embodiments of this invention provide a method for enhancing the expression of an insecticidal Bacillus thuringiensis toxin in a plant cell, wherein said method comprises expressing said Bacillus thuringiensis toxin in plastids of said plant cell, and wherein said toxin is expressed from a construct of this invention.
Various embodiments of this invention provide a transgenic plant cell exhibiting enhanced expression of an insecticidal Bacillus thuringiensis toxin, wherein said toxin is expressed from a construct of this invention and wherein said toxin is expressed in plastids of said plant cell.
By this invention, plastid expression constructs are provided which are useful for genetic engineering of plant 3a cells and which provide for enhanced expression of the Bacillus thuringiensis cry proteins in plant cell plastids.
The transformed plastids should be metabolically active plastids, and are preferably maintained at a high copy number in the plant tissue of interest, most preferably the chloroplasts found in green plant tissues, such as leaves or cotyledons.
The plastid expression constructs for use in this invention generally include a plastid promoter region, a DNA
sequence encoding a Bacillus thuringiensis cry protein, and a transcription termination region capable of terminating transcription in a plant plastid.
The plastid expression construct of this invention is preferably linked to a construct having a DNA sequence 3b encoding a selectable marker which can be expressed in a plant plastid. Expression of_the selectable marker allows the identification of plant cells comprising a plastid expressing the marker. -In a preferred embodiment, vectors for transfer-of the construct into a plant cell include means for inserting the expression and selection constructs into the plastid genome. This preferably comprises regions of homology to the target plastid genome which flank the constructs.
The construct of the invention preferrably comprise a native Bacillus thuringie.nsis DNA encoding seguence,-which_ may be a sequence encoding the protoxin. In a preferred embodiment, the-DNA encoding sequence is the csyIA(c) gene.
Plant cell plastids containing the construct are also contemplated in the invention, as are plants, plant seeds, plant cells or progeny thereof containing plastids -comprising the construct. A preferred plant for this purpose is cotton. - -The invention also includes a method for enhancing the expression of an insecticidal Bacillus thuringiensis toxin --in a plant cell, by expressing the Bacillus thuringiensis toxin in plastids of the plant cell. By this-method the expression is enhanced separate from that enhancement which occurs from the increased copy number in plastid - -transformation.
By this invention the insecticidal Bacillus thuringiensis toxin is produced in plastids of a plant cell from the native DNA encoding sequence, with enhanced levels of expression of an insect resistant phenotype, as measured ' by insect feeding assays.
SUBSTITUTE SHEET (RULE 26) DESCRIPTION OF THE FIGURES
Figure 1 shows integration of cry.genes from vectors pZS223.and pZS224 into the wild-type plastid genome (Nt-ptDNA) to yield transplastomes Nt-pZS223 ptDNA and Nt-pZS224 ptDNA, respectively.
DETAILED DESCRIPTION OF THE INVENTION
A plastid expression construct of this invention generally comprises a promoter functional in a plant plastid, a DNA sequence encoding a Bacillus thuringiensis cry protein, and a transcription termination region capable of terminating transcription in a plant plastid. These elements are provided-as operably joined components in the 5' to 3' direction of transcription.
In developing the constructs the various fragments comprising the regulatory regions and open reading frame may be subjected to different processing conditions, such as ligation, restriction enzyme digestion, PCR, in vitro mutagenesis, linkers and adapters addition, and the like.
Thus, nucleotide transitions, transversions, insertions, deletions, or the like, may be performed on the DNA which is employed in the regulatory regions or the DNA sequences of interest for expression in the plastids. Methods for restriction digests, Klenow blunt end treatments, ligations, and the like are well known to those in the art and are described, for example, by Maniatis et al. (in Molecular cloning: a laboratory manual (1982) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY).
During the preparation of the constructs, the various fragments of DNA will-often be cloned in an appropriate cloning vector, which allows for amplification of the DNA, modification of the DNA or manipulation of the DNA by joining or removing sequences, linkers, or the like.
SUBSTITUTE SHEET (RULE 26) Preferably, the vectors will be capable of replication to at least a relatively high copy number in E. coli. A
number of vectors are readily available for cioning, including such vectors as pBR322, vectors of the-pUC
series,-the M13 series vector't,~and pBluescript vectors (Stratagene; La Jolla, CA).
In order to provide a means of selecting the desired plant cells, vectors for plastid transformation typically contain a construct which provides for expression of a selectable marker gene. Marker genes are plant-expressible DNA sequences which express a-polypeptide which resists a natural inhibition by, attenuates, or inactivates a selectivesubstance, i.e., antibiotic, herbicide etc..
Alternatively, a marker gene may provide some other visibly reactive response, i.e., may cause a distinctive appearance or growth pattern relative to plants or plant cells not expressing the selectable marker gene in the presence of some substance, either as applied directly to the plant or plant cells or as present in the plant or plant cell growth media.
In_either case, the plants or plant cells-containing such selectable marker genes will have a distinctive phenotype for purposes of identification, i.e., they will be distinguishable from non-transformed cells. The characteristic phenotype allows the identification of cells, cell groups, tissues, organs, plant parts or whole plants containing the construct.
Detection of the marker phenotype makes possible the selection of cells having a second gene to which the marker gene has been linked. This second gene typically comprises a desirable phenotype which is not readily identifiable in transformed cells, but which is present when the plant cell or derivative thereof is grown to maturity, even under SUBSTITUTE SHEET (RULE 26) conditions wherein the selectable marker phenotype itself is not apparent. - -The use of such a marker for identification of plant cells containing a plastid construct has been.described.
Svab et al. (1993 supra). In the examples provided below, a bacterialaadA gene_is expressed as the marker under the regulatory control of chloroplast 5' promoter and 3' transcription termination regions, specifically the tobacco 16S rRNA promoter rrn region and sps16 3' termination region. Numerous additional promoter regions may also be used to drive expression of the selectable marker gene, including various plastid promoters and bacterial promoters which have been shown_to function in plant plastids.
-Expression of the aadA gene confers resistance to spectinomycin and streptomycin, and thus allows for the identification of plant cells expressing this marker. The aadA gene product allows for continued growth and greening of-cells whose chloroplasts comprise the selectable marker gene product. Cells which do not contain the selectable marker gene product are bleached. Selection for the aadA
gene marker is thus based on identification of plant cells which are not bleached by the presence of streptomycin, or more preferably spectinomycin, in the plant growth medium.
A number of markers have been developed for use with plant cells, such as resistance to chloramphenicol, the aminoglycoside G418, hygromycin, or the 1ike. Other genes which encode a product involved in chloroplast metabolism may also be used as selectable markers. For example, genes which provide resistance to plant herbicides such as glyphosate, bromoxynil or imidazolinone may find particular use. Such genes have been reported (Stalker et al., J.
Biol. Chem. (1985) 260:4724-4728 (glyphosate resistant EPSP); Stalker et al., J. Biol. Chem. (1985) 263:6310-6314 (bromoxynil resistant nitrilase gene); and Sathasivan et SUBSTITUTE SHEET (RULE 26) al., Nucl. Acids Res. (1990) 18:2188 (AHAS imidazolinone resistance gene)).
Stable transformation of tobacco plastid genomes by particle bombardment isreported,(Svab et.a1_(1990 supra) and Svab et al. (1993 supra)):.'3. The methods described therein may be employedto,pb~ain plants homoplasmic for plastid expression constructs.
Generally, bombarded tissue is cultured for approximately 2 days on a cell division-promoting media, after which the plant tissueis transferred to a selective media containing an inhibitory amount of the particular selective agent, as well as the particular hormones and other substances necessary to obtain regeneration for that particular plant species. Shoots are then subcultured on the same selective media to ensure production_and selection of homoplasmic shoots.
Homoplasmy is verified by southern analysis. In the examples provided below, BamHI-cligested total cellular DNA
is tested with various probes, specifically, a part of the plastid targeting fragment, an aadA fragment, a 1.8 kb _ crylA fragment and a 3.5 kb fragment of the cry73 coding region:- Southern blot analysis with these probes confirms the integration of the chimeric cry genes in the tobacco plastid genome to yield transplastome lines.
As an alternative to a second round of shoot formation, the initial selected shoots may be grown to mature plants and segregation relied upon to provide transformed plants homoplastic for the inserted gene construct.
Where transformation and regeneration methods have been adapted for a given plant species, either by Agrobacterium-mediated transformation, bombardment or some other method, the established techniques may be modified SUBSTITUTE SHEET (RULE 26) WO 95124492 2185340) PCT/11S95/02900 for use in selection and regeneration methods to produce plastid-transformed plants. For example, the methods described herein for tobacco are readily adaptable to other solanaceous species, such as tomato, petunia and potato.
In Brassica, Agrobacterium-mediated transformation and regeneration protocols generally involve the use of hypocotyl tissue, a non-green tissue which might contain a low plastid content. Thus, for Brassica; preferred target tissues would include microspore-derived hypocotyl or cotyledonary tissues (which aregreen and thus contain numerous plastids) or leaf tissue explants. While the regeneration rates from such tissues may be low, positional effects, such as seen with Agrobacterium-mediated transformation, are not expected, thus it would not be necessary to screen numerous-successfully transformed plants in order to obtain a desired phenotype.
For cotton, transformation of Gossypium hirsutum L.
cotyledons by co-cultivation with Agrobacterium tumefaciens has been described by Firoozabady et al., P1ant Mol. Bio.
(1987) 10:105-116 and Umbeck et al., Bio/Technology (1987) 5:263-266. Again,as for Brassica, this tissue may contain insufficient plastid content for chloroplast transformation. Thus, as for Brassica, an alternative method for transformation and regeneration of alternative target tissue containing chloroplasts may be desirable, for instance targeting green-embryogenic tissue.
other plant species may be similarly transformed using related techniques. Alternatively, microprojectile bombardment methods, such as described by Klein et al.
(Bio/Technology 10:286-291) may also be used to obtain nucl-ear transformed plants comprising the viral single subunit RNA polymerase expression constructs described herein. Cotton.transformation by particle bombardment is reported in WO 92/15675, published September 17, 1992.
Figure 1 shows integration of cry.genes from vectors pZS223.and pZS224 into the wild-type plastid genome (Nt-ptDNA) to yield transplastomes Nt-pZS223 ptDNA and Nt-pZS224 ptDNA, respectively.
DETAILED DESCRIPTION OF THE INVENTION
A plastid expression construct of this invention generally comprises a promoter functional in a plant plastid, a DNA sequence encoding a Bacillus thuringiensis cry protein, and a transcription termination region capable of terminating transcription in a plant plastid. These elements are provided-as operably joined components in the 5' to 3' direction of transcription.
In developing the constructs the various fragments comprising the regulatory regions and open reading frame may be subjected to different processing conditions, such as ligation, restriction enzyme digestion, PCR, in vitro mutagenesis, linkers and adapters addition, and the like.
Thus, nucleotide transitions, transversions, insertions, deletions, or the like, may be performed on the DNA which is employed in the regulatory regions or the DNA sequences of interest for expression in the plastids. Methods for restriction digests, Klenow blunt end treatments, ligations, and the like are well known to those in the art and are described, for example, by Maniatis et al. (in Molecular cloning: a laboratory manual (1982) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY).
During the preparation of the constructs, the various fragments of DNA will-often be cloned in an appropriate cloning vector, which allows for amplification of the DNA, modification of the DNA or manipulation of the DNA by joining or removing sequences, linkers, or the like.
SUBSTITUTE SHEET (RULE 26) Preferably, the vectors will be capable of replication to at least a relatively high copy number in E. coli. A
number of vectors are readily available for cioning, including such vectors as pBR322, vectors of the-pUC
series,-the M13 series vector't,~and pBluescript vectors (Stratagene; La Jolla, CA).
In order to provide a means of selecting the desired plant cells, vectors for plastid transformation typically contain a construct which provides for expression of a selectable marker gene. Marker genes are plant-expressible DNA sequences which express a-polypeptide which resists a natural inhibition by, attenuates, or inactivates a selectivesubstance, i.e., antibiotic, herbicide etc..
Alternatively, a marker gene may provide some other visibly reactive response, i.e., may cause a distinctive appearance or growth pattern relative to plants or plant cells not expressing the selectable marker gene in the presence of some substance, either as applied directly to the plant or plant cells or as present in the plant or plant cell growth media.
In_either case, the plants or plant cells-containing such selectable marker genes will have a distinctive phenotype for purposes of identification, i.e., they will be distinguishable from non-transformed cells. The characteristic phenotype allows the identification of cells, cell groups, tissues, organs, plant parts or whole plants containing the construct.
Detection of the marker phenotype makes possible the selection of cells having a second gene to which the marker gene has been linked. This second gene typically comprises a desirable phenotype which is not readily identifiable in transformed cells, but which is present when the plant cell or derivative thereof is grown to maturity, even under SUBSTITUTE SHEET (RULE 26) conditions wherein the selectable marker phenotype itself is not apparent. - -The use of such a marker for identification of plant cells containing a plastid construct has been.described.
Svab et al. (1993 supra). In the examples provided below, a bacterialaadA gene_is expressed as the marker under the regulatory control of chloroplast 5' promoter and 3' transcription termination regions, specifically the tobacco 16S rRNA promoter rrn region and sps16 3' termination region. Numerous additional promoter regions may also be used to drive expression of the selectable marker gene, including various plastid promoters and bacterial promoters which have been shown_to function in plant plastids.
-Expression of the aadA gene confers resistance to spectinomycin and streptomycin, and thus allows for the identification of plant cells expressing this marker. The aadA gene product allows for continued growth and greening of-cells whose chloroplasts comprise the selectable marker gene product. Cells which do not contain the selectable marker gene product are bleached. Selection for the aadA
gene marker is thus based on identification of plant cells which are not bleached by the presence of streptomycin, or more preferably spectinomycin, in the plant growth medium.
A number of markers have been developed for use with plant cells, such as resistance to chloramphenicol, the aminoglycoside G418, hygromycin, or the 1ike. Other genes which encode a product involved in chloroplast metabolism may also be used as selectable markers. For example, genes which provide resistance to plant herbicides such as glyphosate, bromoxynil or imidazolinone may find particular use. Such genes have been reported (Stalker et al., J.
Biol. Chem. (1985) 260:4724-4728 (glyphosate resistant EPSP); Stalker et al., J. Biol. Chem. (1985) 263:6310-6314 (bromoxynil resistant nitrilase gene); and Sathasivan et SUBSTITUTE SHEET (RULE 26) al., Nucl. Acids Res. (1990) 18:2188 (AHAS imidazolinone resistance gene)).
Stable transformation of tobacco plastid genomes by particle bombardment isreported,(Svab et.a1_(1990 supra) and Svab et al. (1993 supra)):.'3. The methods described therein may be employedto,pb~ain plants homoplasmic for plastid expression constructs.
Generally, bombarded tissue is cultured for approximately 2 days on a cell division-promoting media, after which the plant tissueis transferred to a selective media containing an inhibitory amount of the particular selective agent, as well as the particular hormones and other substances necessary to obtain regeneration for that particular plant species. Shoots are then subcultured on the same selective media to ensure production_and selection of homoplasmic shoots.
Homoplasmy is verified by southern analysis. In the examples provided below, BamHI-cligested total cellular DNA
is tested with various probes, specifically, a part of the plastid targeting fragment, an aadA fragment, a 1.8 kb _ crylA fragment and a 3.5 kb fragment of the cry73 coding region:- Southern blot analysis with these probes confirms the integration of the chimeric cry genes in the tobacco plastid genome to yield transplastome lines.
As an alternative to a second round of shoot formation, the initial selected shoots may be grown to mature plants and segregation relied upon to provide transformed plants homoplastic for the inserted gene construct.
Where transformation and regeneration methods have been adapted for a given plant species, either by Agrobacterium-mediated transformation, bombardment or some other method, the established techniques may be modified SUBSTITUTE SHEET (RULE 26) WO 95124492 2185340) PCT/11S95/02900 for use in selection and regeneration methods to produce plastid-transformed plants. For example, the methods described herein for tobacco are readily adaptable to other solanaceous species, such as tomato, petunia and potato.
In Brassica, Agrobacterium-mediated transformation and regeneration protocols generally involve the use of hypocotyl tissue, a non-green tissue which might contain a low plastid content. Thus, for Brassica; preferred target tissues would include microspore-derived hypocotyl or cotyledonary tissues (which aregreen and thus contain numerous plastids) or leaf tissue explants. While the regeneration rates from such tissues may be low, positional effects, such as seen with Agrobacterium-mediated transformation, are not expected, thus it would not be necessary to screen numerous-successfully transformed plants in order to obtain a desired phenotype.
For cotton, transformation of Gossypium hirsutum L.
cotyledons by co-cultivation with Agrobacterium tumefaciens has been described by Firoozabady et al., P1ant Mol. Bio.
(1987) 10:105-116 and Umbeck et al., Bio/Technology (1987) 5:263-266. Again,as for Brassica, this tissue may contain insufficient plastid content for chloroplast transformation. Thus, as for Brassica, an alternative method for transformation and regeneration of alternative target tissue containing chloroplasts may be desirable, for instance targeting green-embryogenic tissue.
other plant species may be similarly transformed using related techniques. Alternatively, microprojectile bombardment methods, such as described by Klein et al.
(Bio/Technology 10:286-291) may also be used to obtain nucl-ear transformed plants comprising the viral single subunit RNA polymerase expression constructs described herein. Cotton.transformation by particle bombardment is reported in WO 92/15675, published September 17, 1992.
SUBSTITUTE SHEET (RULE 26) W O 95/24492 2185d4O PCT/US95l02900 The vectors for use in plastid transformation =
preferably include means for providing a stable transfer of , the plastid expression construct and selectable marker construct into the plastid genome. This is most conveniently provided by regions cif homology to the target plastid genome. The regions qf homology flank the construct to be transferred and provide for transfer to the plastid genome by homologous recombination, via a double crossover into the genome. The complete DNA sequenceof the plastid genome of tobacco has been reported (Shinozaki et al. (1986) ErIDO J. 5:2043-2049). Complete DNA sequences of the plastid genomes from liverwort (Ohyama et a1.-(1986) Nature 322:572-574) and rice (Hiratsuka et al. (1989) Mol.
Gen. Genet. 217:185-194), have also been reported.
Where the regions of homology are present in the inverted repeat regions of the plastidgenome (known as IRA
and IRB), two copies of the transgene are expected per transformed plastid. The regions of homology within the plastid genome are approximately lkb in size. Smaller regions of homology may also be used, and as little as 100 bp can provide for homologous recombination into the plastid genome. However, the frequency of recombination and thus the frequency of obtaining plants having transformed plastids decreases with decreasing size of the homology regions.
Examples of constructs having regions of homology the plastid genome are described in Svab et.al. (1990 supra) and Svab et al. (1993 supra). Regions useful for recombination into tobacco and Brassica plastid genomes are also identified in the following examples, but homologous recombination and selection constructs may be prepared using many plastid DNA sequences, and to any target plant species. In the.e.xamples provided herein, the flanking tobacco plastid homology regions of the plastid expression construct direct the insertion of a Bacillus thuringiensis transgene into the tobacco genome between trnV and the SUBSTITUTE SHEET (RULE 26) rps12 operon. Since integration into the plastid genome occurs by homologous recombination and the target site is in an inverted repeat region of the plastid genome, two copies of the transgene per plastid genome are expected.
Selection is made for-the spectinomycin resistance marker phenotype expressed bythe aadA gene.
In the example the native cry gene, i.e., having an unmodified coding region to the protoxin, is placed into a plastid expression construct for expression of Bacillus thuringiensis toxin from the plant plastid.
A synthetic Bacillus thuringiensis gene is placed in the same expression construct as the protoxin gene. The synthetic gene is designed to have tobacco RuBPCO small subunit codon usage, with an overall increase in the guanine plus cytosine content from 39% to 55% with respect to the native gene, and has been truncated to leave only those sequences which enode the active fragment of the toxin. Such a gene is known to provide optimal expression from the plant nuclear genome.
Both encoding sequences are introduced via a chloroplast transformation vector (Fig. 1). Tobacco lines containing the native encoding sequence to the protoxin demonstrate strong insecticidal bioactivity, as measured by insect feeding assays_ In transformed plants containing the native encoding sequence, the Bacillus thuringiensis toxin is present as a component of up to about 5% or greater of the total leaf protein, a level which is much higher than is present in the leaf of plants resulting from nuclear transformation.
Tobacco lines having a synthetic crylA(c) gene demonstrate no observable bioactivity. In plants containing the gene resynthesized to approximate the preferred codons of the plant genome, the mRNA to the toxin SUBSTITUTE SHEET (RULE 26) appears degraded, and little or no toxin protein appears present in the leaf.
it is now shown that the native Bacillus thuringiensis gene achieves an expression level.which is much higher in plastid expression than is possible with resynthesized sequence to the same gene, thus demonstrating that a gene having native bacterial encoding sequence can achieve high levels of expression in a plant plastid. The above results eliminate the need to resynthesize the Bacillus thuringiensis toxin genes to achieve high level expression in plants.
The invention now being generally described, it will be more readily understood by reference to the following examples which are included for purposes of illustration only and are not intended to limit the present invention.
EXAMPLES
in the experimental disclosure which follows, all temperatures are given in degrees centigrade ( ), weights are given in grams (g), milligram (mg) or micrograms (}l.g), concentrations are given as molar (M), millimolar (mM) or micromolar ( M) and allvolumes are given in liters (1), milliliters (ml) or microliters ( l), unless otherwise indicated. -EXAMPLE 1. PLASTID TRANSFORMATION VECTORS
Constructs and methods for use in transforming the plastids of higher plants are described in Svab et al.
(1990 supra), Svab et al. (1993 supra) and Staub et al.
(1993 supra). The complete DNA sequences of_the plastid genome of tobacco are reported by Shinozaki et al. (1986 supra). All plastid DNA references in the following description are to the nucleotide number from tobacco.
SUBSTITUTE SHEET (RULE 26) The cryIA(c) gene is obtained from plasmid pBtkfID73 (Toagosei Chemical Co, Japan). This gene is further processed by digestion with Smal/NsiI and a synthetic adapter isinserted (top strand: 5'-CCCGGATCCATGGATAACAATCCGA-ACATCAATGAATGCA-3'; bottom strand: 5'-TTCATTGATGTTCGGATT-GTTATCCATGGATCCGGG-3'). The entire 5' untranslated region from the crylA(c) gene is then removed, and an NcoI site is introduced at the natural start codon (position 163 of the nucleotide sequence (Adang et al. (1985) Gene 36;289-300). A BamHI site is introduced just upstream of the NcoI site. Oligonucleotide mutagenesis is performed to introduce Bg12I and Sa1I sites directly adjacent to the stop codon of the crylA(c) gene, to facilitate removal of unwanted DNA 3' of the coding region. The remaining sequence.includes the entire encoding region to the protoxin.
A synthetic crylA(c) gene encoding the active toxin fragment is constructed by annealing and ligating 70 and 90 base oligonucleotides, in a method as described (Wosnick et a1. (1987) Gene 60;115-127). The synthetic gene is designed to have tobacco RuBISCO small subunit codon usage, including a guanine and cytosine content of 55%, with an NcoI site at the start codon and a Sa1I site at the stop codon, while still encoding the amino acid sequence of the toxin. This synthetic gene is also truncated, however, so that the encoding region only provides the amino acid sequence to the active fragment of the protoxin.
A plastid transformation vector is used which carries a passenger gene in a,Prrn(L)rbcL(S)/Trps16 expression cassette, with polylinker restriction sites. The Prrn(L)rbcL(S) fragments are described in Svab et al. (1993 supra). To further secure the stability of the mRNAs, the Trps16 fragment is cloned downstream of the passenger gene encoding region. The-Trps16 fragment comprises,the sps16 gene 3'-regulatory region from nucleotides 5,087 to 4,939 in the tobacco plasmid DNA.
SUBSTITUTE SHEET (RULE 26) WO 95/24492 ~1O5340 PCTIUS95/02900 0 Chimeri:c-genes are preferably inserted into the vector to direct their transcription towards the rrn operon.
Thus, in the plastid genome, chimeric genes are transcribed from the Prrn(L)rbcL(S) 5'-regulatory region comprising the long rrn operon promoter fragmeYit from nucleotides 102,561 to 102,677 of the tobacco plastid genome, which is fused with a synthetic leader sequence designed after the rbcL
gene leader between nucleotides 57,569 to 57,584 in the plastid DNA.
The plastid transformation vector also carries a selectable spectinomycin resistance gene (aadA) under control of psbA gene expression signals. The regulatory and encoding sequendes are also flanked by plastid DNA
homology regions whose limits are bp 138,447 (EcoRI) to 140,219 (HinclI) and 140,219 (HincII) to 141,382 (Bg11I) of the tobacco plastid genome (Shinozaki et al. (1986 supra)).
This directs insertion of foreign genes located between the flanking regions into the plastid between the trnV gene and the rps12/7 operon.
This plastid transformation vector is digested with the Nco2/Sall restriction endonucleases to remove the encoding region of the passenger gene, which is then replaced with a NcoI/Sa11 fragment containing the synthetic crylA(c) coding region, yielding a vector which is designated pZS223 (Fig. 1). The wild type cryIA(c) protoxin gene is similarly cloned as an NcoI/Sa1I fragment, yielding a plasmid designated pZS224. By this approach Bacillus thuringiensis DNA 3' of the protein coding region is omitted for both plasmids, pZS223 and pZS224.
The insertion of the respective cry genes from vectors pZS223 and pZS224 into the wild-type plastid genome (Nt-ptDNA) to yield transplastomes Nt-pZS223 and Nt-pZS224, respectively, is shown in Fig. 1. The abbreviations used in Fig. 1 are as follows: 16S, 16S rRNA gene; trnV, trnV
SUBSTITUTE SHEET (RULE 26) gene; aadA, spectinomycin resistance gene; crylA and cry73 are synthetic and native Bacillus thuringiensis d-endotoxin genes, respectively. The restriction endonuclease cleavage sites are designated as follows: B, BarrHI; Bg, BglII; H, HindIII; N, NcoI; RI, EcoRI, RV, EcoRV; S, Sa1I.
EXAMPLE 2. PLANT PLASTID TRANSFORMATION
Stable transformation of tobacco plastid genomes by particle bombardment is reported in Svab et.al. (1990 supra) and Svab et a1. (1993 supra). The methods described therein may be employed to obtain plants transformed with the plastid expression constructs described herein. Such methods generally involve DNA bombardment of a target host explant, preferably an explant made from a tissue which is rich in metabolically active plastids, such as green plant tissues including leaves or cotyledons.
Tobacco seeds (N. tabacum v. Xanthi N/C) are surface sterilized in a 50% chloroxTM solution (2.5% sodium hypochlorite) for 20 minutes and rinsed 4 times in sterile H20. These are plated asceptically on a 0.2x MS salts media and allowed to germinate. The seedlings are grown on agar solidified MS media with 30g/l sucrose (Murashige et al. (1962) Physiol. P1ant 15:493-497).
Tungsten microprojectiles (1.O M) are coated with plasmid DNA according to Maliga (Maliga, P. (1993) Methods in Plant Molecular Biology - A Laboratory Manual, eds. Pal Maliga, Daniel Klessig, Anthony Cashmore, Wilhelm Gruissem and Joseph Varner; Cold Spring Harbor Press) and used to bombard mature leaves, placed abaxial side up on RMOP
media; MS salts, 1 mg/1 BAP, 0.1 mg/1 NAA, 30 g/l sucrose and 0.7% phytagarTM. Svab et al. (1990) Proc. Natl. Acad.
Sci. USA 87:8526-8530 (using the Bio-Rad PDS 1000 He system (Sanford et al., An improved, helium-driven Biolistic device, Technique 3:3-16)). Plasmids pZS223 and pZS224 are used as the coating plasmid DNA.
WO 95/24492 G 1 U5eJ 40 PCT/US95/02900 The bombarded tissue is then cultured for approximately 2 days on a cell division-promoting media, after which the plant tissue is transferred to a selective media containing an inhibitoryõamount of the particular selective agent. Transformed explants form green shoots in approximately 3-8 weeks. 'Leaves from these shoots are then -subcultured on the same selective media to ensure productionand selection of homoplasmic shoots.
EXAMPLE 3. DNA GEL BLOT ANALYSIS OF TRANSPLASTOMIC LINES
Transformed plants selected for marker aadA marker gene expression are analyzed to determine whether the entire plastid content of the plant has been transformed (homoplastic transformants). Typically, following two rounds of shoot formation and spectinomycin selection, approximately 50% of the transgenic plantlets which are analyzed are homoplastic, as determined by Southern blot analysis of plastid DNA. Homoplasmic plantlets are selected for further cultivation.
Following a second round of shoot formation and spectinomycin selection, two transplastomic lines for each construct are obtained, Nt-pZS223 and Nt-pZS224. These lines are checked for homoplasmy. Southern blot analysis is used to confirm the integration of the chimeric cry genes in the tobacco plastid genome. Preparation, electrophoresis, and transfer of DNA to filters is as described (Svab et al., (1993 supra)).
The complete disappearance of the 3.3 Kb native tobacco BamHI fragment in the Nt-pZS223 and Nt-pZS224 transformants with a probe covering the region of integration, and the appearance of expected sized bands for the inserted DNA fragments in those transformants, 5.5 kb and 7.3 kb, respectively (see Fig. 1), establishes that the transformed plants are homoplasmic for the intended SUBSTITUTE SHEET (RULE 26) *VV0 95/24492 21 O5e) 40 PCT1US95/02900 constructs. Probing identical filters with the aadA, cryIA(c) protoxin, and synthetic cryIA(c) genes demonstrated a linkage of the aadA andczylA(c) genes to the expected 5.5 and 7.3 Kb BamHI fragments as well as the lack of these genes in the negative control.
EXAMPLE 4. INSECT BIOASSAYS
As described, the development of transformed plant lines Nt-pZS223 and Nt-pZS224 is accomplished on RMOPmedia supplemented with 500 mg/1 Spectinomycin dihydrochloride.
Plants are subcloned on the same selective medium, by the method according Svab et al.(1990 supra). Selected plants are then rooted in MSmedia containing 1 mg/1 IRA, 500 mg/1 Spectinomycin dihydrochloride and 0.6% phytagar.
Helicoverpa zea and Heliothis virescens eggs are obtained from the USDA-ARS in Stoneville, MS. and allowed to hatch. Neonate larva are placed on Tobacco Budworm Diet from Bioserve (Frenchtown, NJ), and incubated in a 16:8 photoperiod at 28'C for 5 days. The larva develop during this time to late second or early third instar.
At 5 days, fully expanded leaves are excised from the tobacco plants and placed on 3 ml of 2% agar in a 32 well rearing tray from CD International (Pitman, NJ). The larva are placed 1 per-well, sealed-and incubated for 5 days at the same conditions. -At day 10, the leaf material consumed by the insect is estimated and insects checked for mortality. The larva are considered dead if they showed no movement after prodding with forceps.
EXAMPLE 5. INSECTICIDAL FEEDING ACTIVITY
To determine the presence and relative amount of active Bacillus thuringiensis d-toxin in the tobacco lines homoplasmic for native protoxin and synthetic 'truncated' cryiA(c) gene expression constructs, efficacy of these SUBSTITUTE SHEET (RULE 26) WO 95/24492 2 18 5 c7 4 V PCT/U595/02900 plants to third instar Heliothis virescens (tobacco -budworm) and HeSicoverpa zea (corn earworm/cotton bollworm) larvae is tested. Both test'insects are sensitive to the cryIA(c) toxin with H: zea being 10-fold more resistant than H. virescens (MacIntosh et al. (1990) J. Invertebr.
Pathol. 56:258-266.).
Third instar larvae are chosen for the bioassay since the insects are more resistant to the toxin at this stage than are first instar larvae thus allowing a more stringent comparison between_the control and test plants. Tobacco lines designated 4083 and 4084, derived by nuclear transformation with the same synthetic cryIA(c) gene as used in pZS223 and shown to be highly toxic to third instar H. virescens larvae, are used as positive controls in the bioassay. Nicotiana tabacum var. 'Petite Havana' serves as the negative control since this is the genetic background used to generate the transplastomic lines.
Table 1 is a summary of Bacillus thuringiensis tobacco insect feeding assays. The data demonstrates that transplastomic line Nt-pZS224 is very toxic to both H.
virescens and H. zea as it causes 100% mortality to these insects while sustaining less than 2% total leaf damage.
This result compares favorably to the results for positive control 4083 and 4084 tobacco plants. The 4083-2-4 plant when assayed with H. zea causes 100% mortality but sustains a much greater level of leaf feeding damage than the Nt-pZS224 tobacco line indicating less toxin production.
Tobacco line 4084-4-1 performed comparably to Nt-pZS224 tobacco-in feeding, although it does not compare to the levels of toxin produced in Nt-pZS224 when measured as a component of total leaf protein.
Sl18STITUTE SHEET (RULE 26) Tobacco line Nt-pZS223 shows no detectable bioactivity.
SUMMARY OF BTTOBACCO INSECT FEMING ASSAYS
plants Chloropla8t Vector tested Heliothis virescensAA % Leat eaten Heliocoverpa zea~~ % Leat eaten synthetic toxin gene pZS223 223-3 NO mortality 100% NO monality 100"/.
223-5 NO mortality 75% NO mortatity 100%
223-12 NT' NO mortality 100%
223-13 NO mortality 75% W.
wild type protoxin gene pZS224 224-5 100% mortality 2"/. 100% mortality 2%
224-9 100% mortality 2"/. 100% mortality 2%
Nuclear Controls synthetic toxin gene pCGN40B3 4083-1-2 100% mortallty 2% NT' 4083-2-4 W. 100% mortality 40%
pCGN4084 4084-8-5 100% mortality 2% W.
4084-1-1 NT' 100% mortality 2"/.
Untransformed Controls control 1 25% mortality 75% NO mortality 100%
control 2 NO mortality 100% NT' control 3 50% mortality 75% NT' AA 10 third Instar larva were lndMdually tested per plant 'NT: Plant not tested _ All publications and patent applications mentioned in this specification are indicative of the level of skill of those skilled in the art to which this invention pertains.
Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, it will be obvious that certain changes and modifications may be practiced within the scope of the appended claim.
preferably include means for providing a stable transfer of , the plastid expression construct and selectable marker construct into the plastid genome. This is most conveniently provided by regions cif homology to the target plastid genome. The regions qf homology flank the construct to be transferred and provide for transfer to the plastid genome by homologous recombination, via a double crossover into the genome. The complete DNA sequenceof the plastid genome of tobacco has been reported (Shinozaki et al. (1986) ErIDO J. 5:2043-2049). Complete DNA sequences of the plastid genomes from liverwort (Ohyama et a1.-(1986) Nature 322:572-574) and rice (Hiratsuka et al. (1989) Mol.
Gen. Genet. 217:185-194), have also been reported.
Where the regions of homology are present in the inverted repeat regions of the plastidgenome (known as IRA
and IRB), two copies of the transgene are expected per transformed plastid. The regions of homology within the plastid genome are approximately lkb in size. Smaller regions of homology may also be used, and as little as 100 bp can provide for homologous recombination into the plastid genome. However, the frequency of recombination and thus the frequency of obtaining plants having transformed plastids decreases with decreasing size of the homology regions.
Examples of constructs having regions of homology the plastid genome are described in Svab et.al. (1990 supra) and Svab et al. (1993 supra). Regions useful for recombination into tobacco and Brassica plastid genomes are also identified in the following examples, but homologous recombination and selection constructs may be prepared using many plastid DNA sequences, and to any target plant species. In the.e.xamples provided herein, the flanking tobacco plastid homology regions of the plastid expression construct direct the insertion of a Bacillus thuringiensis transgene into the tobacco genome between trnV and the SUBSTITUTE SHEET (RULE 26) rps12 operon. Since integration into the plastid genome occurs by homologous recombination and the target site is in an inverted repeat region of the plastid genome, two copies of the transgene per plastid genome are expected.
Selection is made for-the spectinomycin resistance marker phenotype expressed bythe aadA gene.
In the example the native cry gene, i.e., having an unmodified coding region to the protoxin, is placed into a plastid expression construct for expression of Bacillus thuringiensis toxin from the plant plastid.
A synthetic Bacillus thuringiensis gene is placed in the same expression construct as the protoxin gene. The synthetic gene is designed to have tobacco RuBPCO small subunit codon usage, with an overall increase in the guanine plus cytosine content from 39% to 55% with respect to the native gene, and has been truncated to leave only those sequences which enode the active fragment of the toxin. Such a gene is known to provide optimal expression from the plant nuclear genome.
Both encoding sequences are introduced via a chloroplast transformation vector (Fig. 1). Tobacco lines containing the native encoding sequence to the protoxin demonstrate strong insecticidal bioactivity, as measured by insect feeding assays_ In transformed plants containing the native encoding sequence, the Bacillus thuringiensis toxin is present as a component of up to about 5% or greater of the total leaf protein, a level which is much higher than is present in the leaf of plants resulting from nuclear transformation.
Tobacco lines having a synthetic crylA(c) gene demonstrate no observable bioactivity. In plants containing the gene resynthesized to approximate the preferred codons of the plant genome, the mRNA to the toxin SUBSTITUTE SHEET (RULE 26) appears degraded, and little or no toxin protein appears present in the leaf.
it is now shown that the native Bacillus thuringiensis gene achieves an expression level.which is much higher in plastid expression than is possible with resynthesized sequence to the same gene, thus demonstrating that a gene having native bacterial encoding sequence can achieve high levels of expression in a plant plastid. The above results eliminate the need to resynthesize the Bacillus thuringiensis toxin genes to achieve high level expression in plants.
The invention now being generally described, it will be more readily understood by reference to the following examples which are included for purposes of illustration only and are not intended to limit the present invention.
EXAMPLES
in the experimental disclosure which follows, all temperatures are given in degrees centigrade ( ), weights are given in grams (g), milligram (mg) or micrograms (}l.g), concentrations are given as molar (M), millimolar (mM) or micromolar ( M) and allvolumes are given in liters (1), milliliters (ml) or microliters ( l), unless otherwise indicated. -EXAMPLE 1. PLASTID TRANSFORMATION VECTORS
Constructs and methods for use in transforming the plastids of higher plants are described in Svab et al.
(1990 supra), Svab et al. (1993 supra) and Staub et al.
(1993 supra). The complete DNA sequences of_the plastid genome of tobacco are reported by Shinozaki et al. (1986 supra). All plastid DNA references in the following description are to the nucleotide number from tobacco.
SUBSTITUTE SHEET (RULE 26) The cryIA(c) gene is obtained from plasmid pBtkfID73 (Toagosei Chemical Co, Japan). This gene is further processed by digestion with Smal/NsiI and a synthetic adapter isinserted (top strand: 5'-CCCGGATCCATGGATAACAATCCGA-ACATCAATGAATGCA-3'; bottom strand: 5'-TTCATTGATGTTCGGATT-GTTATCCATGGATCCGGG-3'). The entire 5' untranslated region from the crylA(c) gene is then removed, and an NcoI site is introduced at the natural start codon (position 163 of the nucleotide sequence (Adang et al. (1985) Gene 36;289-300). A BamHI site is introduced just upstream of the NcoI site. Oligonucleotide mutagenesis is performed to introduce Bg12I and Sa1I sites directly adjacent to the stop codon of the crylA(c) gene, to facilitate removal of unwanted DNA 3' of the coding region. The remaining sequence.includes the entire encoding region to the protoxin.
A synthetic crylA(c) gene encoding the active toxin fragment is constructed by annealing and ligating 70 and 90 base oligonucleotides, in a method as described (Wosnick et a1. (1987) Gene 60;115-127). The synthetic gene is designed to have tobacco RuBISCO small subunit codon usage, including a guanine and cytosine content of 55%, with an NcoI site at the start codon and a Sa1I site at the stop codon, while still encoding the amino acid sequence of the toxin. This synthetic gene is also truncated, however, so that the encoding region only provides the amino acid sequence to the active fragment of the protoxin.
A plastid transformation vector is used which carries a passenger gene in a,Prrn(L)rbcL(S)/Trps16 expression cassette, with polylinker restriction sites. The Prrn(L)rbcL(S) fragments are described in Svab et al. (1993 supra). To further secure the stability of the mRNAs, the Trps16 fragment is cloned downstream of the passenger gene encoding region. The-Trps16 fragment comprises,the sps16 gene 3'-regulatory region from nucleotides 5,087 to 4,939 in the tobacco plasmid DNA.
SUBSTITUTE SHEET (RULE 26) WO 95/24492 ~1O5340 PCTIUS95/02900 0 Chimeri:c-genes are preferably inserted into the vector to direct their transcription towards the rrn operon.
Thus, in the plastid genome, chimeric genes are transcribed from the Prrn(L)rbcL(S) 5'-regulatory region comprising the long rrn operon promoter fragmeYit from nucleotides 102,561 to 102,677 of the tobacco plastid genome, which is fused with a synthetic leader sequence designed after the rbcL
gene leader between nucleotides 57,569 to 57,584 in the plastid DNA.
The plastid transformation vector also carries a selectable spectinomycin resistance gene (aadA) under control of psbA gene expression signals. The regulatory and encoding sequendes are also flanked by plastid DNA
homology regions whose limits are bp 138,447 (EcoRI) to 140,219 (HinclI) and 140,219 (HincII) to 141,382 (Bg11I) of the tobacco plastid genome (Shinozaki et al. (1986 supra)).
This directs insertion of foreign genes located between the flanking regions into the plastid between the trnV gene and the rps12/7 operon.
This plastid transformation vector is digested with the Nco2/Sall restriction endonucleases to remove the encoding region of the passenger gene, which is then replaced with a NcoI/Sa11 fragment containing the synthetic crylA(c) coding region, yielding a vector which is designated pZS223 (Fig. 1). The wild type cryIA(c) protoxin gene is similarly cloned as an NcoI/Sa1I fragment, yielding a plasmid designated pZS224. By this approach Bacillus thuringiensis DNA 3' of the protein coding region is omitted for both plasmids, pZS223 and pZS224.
The insertion of the respective cry genes from vectors pZS223 and pZS224 into the wild-type plastid genome (Nt-ptDNA) to yield transplastomes Nt-pZS223 and Nt-pZS224, respectively, is shown in Fig. 1. The abbreviations used in Fig. 1 are as follows: 16S, 16S rRNA gene; trnV, trnV
SUBSTITUTE SHEET (RULE 26) gene; aadA, spectinomycin resistance gene; crylA and cry73 are synthetic and native Bacillus thuringiensis d-endotoxin genes, respectively. The restriction endonuclease cleavage sites are designated as follows: B, BarrHI; Bg, BglII; H, HindIII; N, NcoI; RI, EcoRI, RV, EcoRV; S, Sa1I.
EXAMPLE 2. PLANT PLASTID TRANSFORMATION
Stable transformation of tobacco plastid genomes by particle bombardment is reported in Svab et.al. (1990 supra) and Svab et a1. (1993 supra). The methods described therein may be employed to obtain plants transformed with the plastid expression constructs described herein. Such methods generally involve DNA bombardment of a target host explant, preferably an explant made from a tissue which is rich in metabolically active plastids, such as green plant tissues including leaves or cotyledons.
Tobacco seeds (N. tabacum v. Xanthi N/C) are surface sterilized in a 50% chloroxTM solution (2.5% sodium hypochlorite) for 20 minutes and rinsed 4 times in sterile H20. These are plated asceptically on a 0.2x MS salts media and allowed to germinate. The seedlings are grown on agar solidified MS media with 30g/l sucrose (Murashige et al. (1962) Physiol. P1ant 15:493-497).
Tungsten microprojectiles (1.O M) are coated with plasmid DNA according to Maliga (Maliga, P. (1993) Methods in Plant Molecular Biology - A Laboratory Manual, eds. Pal Maliga, Daniel Klessig, Anthony Cashmore, Wilhelm Gruissem and Joseph Varner; Cold Spring Harbor Press) and used to bombard mature leaves, placed abaxial side up on RMOP
media; MS salts, 1 mg/1 BAP, 0.1 mg/1 NAA, 30 g/l sucrose and 0.7% phytagarTM. Svab et al. (1990) Proc. Natl. Acad.
Sci. USA 87:8526-8530 (using the Bio-Rad PDS 1000 He system (Sanford et al., An improved, helium-driven Biolistic device, Technique 3:3-16)). Plasmids pZS223 and pZS224 are used as the coating plasmid DNA.
WO 95/24492 G 1 U5eJ 40 PCT/US95/02900 The bombarded tissue is then cultured for approximately 2 days on a cell division-promoting media, after which the plant tissue is transferred to a selective media containing an inhibitoryõamount of the particular selective agent. Transformed explants form green shoots in approximately 3-8 weeks. 'Leaves from these shoots are then -subcultured on the same selective media to ensure productionand selection of homoplasmic shoots.
EXAMPLE 3. DNA GEL BLOT ANALYSIS OF TRANSPLASTOMIC LINES
Transformed plants selected for marker aadA marker gene expression are analyzed to determine whether the entire plastid content of the plant has been transformed (homoplastic transformants). Typically, following two rounds of shoot formation and spectinomycin selection, approximately 50% of the transgenic plantlets which are analyzed are homoplastic, as determined by Southern blot analysis of plastid DNA. Homoplasmic plantlets are selected for further cultivation.
Following a second round of shoot formation and spectinomycin selection, two transplastomic lines for each construct are obtained, Nt-pZS223 and Nt-pZS224. These lines are checked for homoplasmy. Southern blot analysis is used to confirm the integration of the chimeric cry genes in the tobacco plastid genome. Preparation, electrophoresis, and transfer of DNA to filters is as described (Svab et al., (1993 supra)).
The complete disappearance of the 3.3 Kb native tobacco BamHI fragment in the Nt-pZS223 and Nt-pZS224 transformants with a probe covering the region of integration, and the appearance of expected sized bands for the inserted DNA fragments in those transformants, 5.5 kb and 7.3 kb, respectively (see Fig. 1), establishes that the transformed plants are homoplasmic for the intended SUBSTITUTE SHEET (RULE 26) *VV0 95/24492 21 O5e) 40 PCT1US95/02900 constructs. Probing identical filters with the aadA, cryIA(c) protoxin, and synthetic cryIA(c) genes demonstrated a linkage of the aadA andczylA(c) genes to the expected 5.5 and 7.3 Kb BamHI fragments as well as the lack of these genes in the negative control.
EXAMPLE 4. INSECT BIOASSAYS
As described, the development of transformed plant lines Nt-pZS223 and Nt-pZS224 is accomplished on RMOPmedia supplemented with 500 mg/1 Spectinomycin dihydrochloride.
Plants are subcloned on the same selective medium, by the method according Svab et al.(1990 supra). Selected plants are then rooted in MSmedia containing 1 mg/1 IRA, 500 mg/1 Spectinomycin dihydrochloride and 0.6% phytagar.
Helicoverpa zea and Heliothis virescens eggs are obtained from the USDA-ARS in Stoneville, MS. and allowed to hatch. Neonate larva are placed on Tobacco Budworm Diet from Bioserve (Frenchtown, NJ), and incubated in a 16:8 photoperiod at 28'C for 5 days. The larva develop during this time to late second or early third instar.
At 5 days, fully expanded leaves are excised from the tobacco plants and placed on 3 ml of 2% agar in a 32 well rearing tray from CD International (Pitman, NJ). The larva are placed 1 per-well, sealed-and incubated for 5 days at the same conditions. -At day 10, the leaf material consumed by the insect is estimated and insects checked for mortality. The larva are considered dead if they showed no movement after prodding with forceps.
EXAMPLE 5. INSECTICIDAL FEEDING ACTIVITY
To determine the presence and relative amount of active Bacillus thuringiensis d-toxin in the tobacco lines homoplasmic for native protoxin and synthetic 'truncated' cryiA(c) gene expression constructs, efficacy of these SUBSTITUTE SHEET (RULE 26) WO 95/24492 2 18 5 c7 4 V PCT/U595/02900 plants to third instar Heliothis virescens (tobacco -budworm) and HeSicoverpa zea (corn earworm/cotton bollworm) larvae is tested. Both test'insects are sensitive to the cryIA(c) toxin with H: zea being 10-fold more resistant than H. virescens (MacIntosh et al. (1990) J. Invertebr.
Pathol. 56:258-266.).
Third instar larvae are chosen for the bioassay since the insects are more resistant to the toxin at this stage than are first instar larvae thus allowing a more stringent comparison between_the control and test plants. Tobacco lines designated 4083 and 4084, derived by nuclear transformation with the same synthetic cryIA(c) gene as used in pZS223 and shown to be highly toxic to third instar H. virescens larvae, are used as positive controls in the bioassay. Nicotiana tabacum var. 'Petite Havana' serves as the negative control since this is the genetic background used to generate the transplastomic lines.
Table 1 is a summary of Bacillus thuringiensis tobacco insect feeding assays. The data demonstrates that transplastomic line Nt-pZS224 is very toxic to both H.
virescens and H. zea as it causes 100% mortality to these insects while sustaining less than 2% total leaf damage.
This result compares favorably to the results for positive control 4083 and 4084 tobacco plants. The 4083-2-4 plant when assayed with H. zea causes 100% mortality but sustains a much greater level of leaf feeding damage than the Nt-pZS224 tobacco line indicating less toxin production.
Tobacco line 4084-4-1 performed comparably to Nt-pZS224 tobacco-in feeding, although it does not compare to the levels of toxin produced in Nt-pZS224 when measured as a component of total leaf protein.
Sl18STITUTE SHEET (RULE 26) Tobacco line Nt-pZS223 shows no detectable bioactivity.
SUMMARY OF BTTOBACCO INSECT FEMING ASSAYS
plants Chloropla8t Vector tested Heliothis virescensAA % Leat eaten Heliocoverpa zea~~ % Leat eaten synthetic toxin gene pZS223 223-3 NO mortality 100% NO monality 100"/.
223-5 NO mortality 75% NO mortatity 100%
223-12 NT' NO mortality 100%
223-13 NO mortality 75% W.
wild type protoxin gene pZS224 224-5 100% mortality 2"/. 100% mortality 2%
224-9 100% mortality 2"/. 100% mortality 2%
Nuclear Controls synthetic toxin gene pCGN40B3 4083-1-2 100% mortallty 2% NT' 4083-2-4 W. 100% mortality 40%
pCGN4084 4084-8-5 100% mortality 2% W.
4084-1-1 NT' 100% mortality 2"/.
Untransformed Controls control 1 25% mortality 75% NO mortality 100%
control 2 NO mortality 100% NT' control 3 50% mortality 75% NT' AA 10 third Instar larva were lndMdually tested per plant 'NT: Plant not tested _ All publications and patent applications mentioned in this specification are indicative of the level of skill of those skilled in the art to which this invention pertains.
Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, it will be obvious that certain changes and modifications may be practiced within the scope of the appended claim.
Claims (12)
1. A construct for expression in a plant plastid comprising (a) to (c) as follows, operably joined in the 5' to 3' direction:
(a) a promoter functional in a plant plastid;
(b) a DNA sequence encoding an insecticidal Bacillus thuringiensis toxin;
(c) a transcription termination region capable of terminating transcription in a plant plastid;
the construct further comprising:
(d) a gene encoding a marker construct for selection of plant cells comprising a plastid expressing said marker; and (e) DNA regions of homology to the genome of said plastid;
wherein (a), (b), (c), and (d) of said construct are between said regions of homology in (e).
(a) a promoter functional in a plant plastid;
(b) a DNA sequence encoding an insecticidal Bacillus thuringiensis toxin;
(c) a transcription termination region capable of terminating transcription in a plant plastid;
the construct further comprising:
(d) a gene encoding a marker construct for selection of plant cells comprising a plastid expressing said marker; and (e) DNA regions of homology to the genome of said plastid;
wherein (a), (b), (c), and (d) of said construct are between said regions of homology in (e).
2. The construct according to Claim 1 wherein said plant plastid is a chloroplast.
3. The construct according to Claim 1 or 2, wherein said DNA encoding sequence encodes a protoxin.
4. The construct according to Claim 1, 2, or 3, wherein said DNA encoding sequence comprises a native Bacillus thuringiensis DNA encoding sequence.
5. A plant cell plastid containing the construct according to any one of Claims 1 to 4.
6. A plant cell or progeny cell thereof containing the construct according to any one of Claims 1 to 4.
7. The plant cell or progeny cell thereof according to Claim 6, wherein said plant cell is a cotton cell.
8. A method for enhancing the expression of an insecticidal Bacillus thuringiensis toxin in a plant cell, wherein said method comprises expressing said Bacillus thuringiensis toxin in plastids of said plant cell, and wherein said toxin is expressed from a construct as defined in any one of Claims 1 to 4.
9. The method according to Claim 8, wherein said plant plastids are chloroplasts.
10. A transgenic plant cell exhibiting enhanced expression of an insecticidal Bacillus thuringiensis toxin, wherein said toxin is expressed from a construct as defined in any one of Claims 1 to 4, and wherein said toxin is expressed in plastids of said plant cell.
11. A plant cell according to Claim 10, wherein said expressed toxin comprises about 5% or greater of the total protein of said cell.
12. A plant cell according to Claim 10 or 11, wherein said plant cell is cotton.
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
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US08/209,951 | 1994-03-11 | ||
US08/209,951 US5545818A (en) | 1994-03-11 | 1994-03-11 | Expression of Bacillus thuringiensis cry proteins in plant plastids |
PCT/US1995/002900 WO1995024492A1 (en) | 1994-03-11 | 1995-03-10 | Expression of bacillus thuringiensis cry proteins in plant plastids |
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CA2185340A1 CA2185340A1 (en) | 1995-09-14 |
CA2185340C true CA2185340C (en) | 2007-07-17 |
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