BR112023022936A2 - Método para identificar novas toxinas formadoras de poros e sistema para identificar novas toxinas formadoras de poros - Google Patents

Método para identificar novas toxinas formadoras de poros e sistema para identificar novas toxinas formadoras de poros

Info

Publication number
BR112023022936A2
BR112023022936A2 BR112023022936A BR112023022936A BR112023022936A2 BR 112023022936 A2 BR112023022936 A2 BR 112023022936A2 BR 112023022936 A BR112023022936 A BR 112023022936A BR 112023022936 A BR112023022936 A BR 112023022936A BR 112023022936 A2 BR112023022936 A2 BR 112023022936A2
Authority
BR
Brazil
Prior art keywords
forming toxins
identifying new
new pore
pore
toxins
Prior art date
Application number
BR112023022936A
Other languages
English (en)
Inventor
Nan Xu
Theju Jacob
Theodore Kahn
Yan Liu
Original Assignee
BASF Agricultural Solutions Seed US LLC
Univ Southern California
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by BASF Agricultural Solutions Seed US LLC, Univ Southern California filed Critical BASF Agricultural Solutions Seed US LLC
Publication of BR112023022936A2 publication Critical patent/BR112023022936A2/pt

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00—ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • G16B15/20—Protein or domain folding
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N20/00—Machine learning
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks

Landscapes

  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical & Material Sciences (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Data Mining & Analysis (AREA)
  • Software Systems (AREA)
  • Evolutionary Computation (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Epidemiology (AREA)
  • Public Health (AREA)
  • Databases & Information Systems (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioethics (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Medicinal Chemistry (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Analytical Chemistry (AREA)
  • Computing Systems (AREA)
  • Biochemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Mathematical Physics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Peptides Or Proteins (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

método para identificar novas toxinas formadoras de poros e sistema para identificar novas toxinas formadoras de poros. a presente revelação se refere ao campo de biotecnologia e, mais especificamente, a sistemas e métodos para identificar novas toxinas formadoras de poros (pfts) com base em estruturas e sequências de proteínas.
BR112023022936A 2021-05-05 2022-05-05 Método para identificar novas toxinas formadoras de poros e sistema para identificar novas toxinas formadoras de poros BR112023022936A2 (pt)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US202163184731P 2021-05-05 2021-05-05
US202263313134P 2022-02-23 2022-02-23
PCT/US2022/072132 WO2022236299A1 (en) 2021-05-05 2022-05-05 Systems and methods for identifying novel pore-forming toxins

Publications (1)

Publication Number Publication Date
BR112023022936A2 true BR112023022936A2 (pt) 2024-01-23

Family

ID=83932465

Family Applications (1)

Application Number Title Priority Date Filing Date
BR112023022936A BR112023022936A2 (pt) 2021-05-05 2022-05-05 Método para identificar novas toxinas formadoras de poros e sistema para identificar novas toxinas formadoras de poros

Country Status (6)

Country Link
EP (1) EP4334335A1 (pt)
KR (1) KR20240004794A (pt)
AU (1) AU2022270210A1 (pt)
BR (1) BR112023022936A2 (pt)
CA (1) CA3217971A1 (pt)
WO (1) WO2022236299A1 (pt)

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005071059A2 (en) * 2004-01-27 2005-08-04 Compugen Ltd. Methods of identifying putative gene products by interspecies sequence comparison and biomolecular sequences uncovered thereby
US9505810B2 (en) * 2014-08-22 2016-11-29 University Of Guelph Toxins in type A Clostridium perfringens

Also Published As

Publication number Publication date
AU2022270210A1 (en) 2023-11-16
WO2022236299A1 (en) 2022-11-10
KR20240004794A (ko) 2024-01-11
EP4334335A1 (en) 2024-03-13
CA3217971A1 (en) 2022-11-10

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