AU760216B2 - Non-reducing saccharide-forming enzyme, trehalose-releasing enzyme, and process for producing saccharides using the same enzymes - Google Patents

Non-reducing saccharide-forming enzyme, trehalose-releasing enzyme, and process for producing saccharides using the same enzymes Download PDF

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AU760216B2
AU760216B2 AU47533/99A AU4753399A AU760216B2 AU 760216 B2 AU760216 B2 AU 760216B2 AU 47533/99 A AU47533/99 A AU 47533/99A AU 4753399 A AU4753399 A AU 4753399A AU 760216 B2 AU760216 B2 AU 760216B2
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enzyme
trehalose
ala
seq
leu
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Shigeharu Fukuda
Michio Kubota
Kazuhiko Maruta
Toshio Miyake
Takuo Yamamoto
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Hayashibara Seibutsu Kagaku Kenkyujo KK
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Hayashibara Seibutsu Kagaku Kenkyujo KK
Hayashibara Biochemical Laboratories Co Ltd
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    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02PCLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
    • Y02P20/00Technologies relating to chemical industry
    • Y02P20/50Improvements relating to the production of bulk chemicals
    • Y02P20/52Improvements relating to the production of bulk chemicals using catalysts, e.g. selective catalysts

Description

P/00/011I Regulation 3.2
AUSTRALIA
PATENTSACT1990 COMPLETE SPECIFICATION FOR A STANDARD PATENT
ORIGINAL
TO BE COMIPLETED BY APPLICANT Name of Applicant: KABUSHIKI KAISHA. HAYASHLBARA SEIBUTSU KAGAKU KENKYUJO Takuo YAMAMOTO, Kazuhiko MARUTA, Michio KUBOTA, Shigeharu FUKUDA, Toshio MIYAKE Actual Inventors: Address for Service: CALLINAN LAWRIE, 711 High Street, Kew, Victoria 3101, Australia Invention Title: NON-REDUCING SACCHARIDE-FORMJNG ENZYME, TREHALOSE- RELEASING ENZYME, AM) PROCESS FOR PRODUCING SACCHARJDES USING THE ENZYMES The following statement is a full description of this invention, including the best method of performing it known to me:- I O/09/ 9 9,mgl 082 cov, I 10258394/601 NON-REDUCING SACCHARIDE-FORMING ENZYME, TREHALOSE-RELEASING ENZYME, AND PROCESS FOR PRODUCING SACCHARIDES USING THE ENZYMES Background of the Invention Field of the Invention The present invention relates to a non-reducing saccharide-forming enzyme, a trehalose-releasing enzyme, and a process for producing saccharides using the enzymes.
Description of the Prior Art S' Trehalose is a disaccharide consisting of two moles of glucose bound at their reducing residues, and is widely found in nature, for example, in microorganisms, fungi, algae, insects, Crustacea, etc. Since the saccharide has long been known as a useful saccharide substantially free of reducibility and having a satisfactory moisture-retaining action, it has been expected to use in extensive fields including foods, cosmetics, and pharmaceuticals. However, no efficient production of the saccharide was established, and this narrows the use of trehalose in spite of its outstanding expectation. Thus supply of trehalose in a lower cost is greatly expected.
As a proposal for such an expectation, the present inventors had already established a process for enzymatically producing trehalose from material starches through their energetic studies. The process is characterized by a step of subjecting reducing partial starch hydrolysates to the action of a non-reducing saccharide-forming enzyme, which forms a non- 1 reducing saccharide having a trehalose structure as an end unit from reducing partial starch hydrolysates, and to the action of a trehalose-releasing enzyme which acts on a non-reducing saccharide having a trehalose structure as an end unit in order to hydrolyze the site between a part of the trehalose structure and a part of the resting. These enzymes and processes thereof are disclosed in Japanese Patent Kokai Nos. 143,876/95, 213,283/95, 322,883/95, 298,880/95, 66,187/96, 66,188/96, 73,504/96, 84,586/96, and 336,388/96, applied for by the same applicant as the present invention. Thus, a low-cost production of trehalose was attained.
During the studies, they found an original finding that the non-reducing saccharide-forming enzyme can be applied for a novel production of non-reducing saccharides that can overcome conventional drawback residing in reducing partial starch hydrolysates. As a problem, reducing partial starch hydrolysates such as dextrins and maltooligosaccharides have advantageous features that they can be used as sweeteners and o energy-supplementing saccharide sources, but as a demerit they highly reactive with substances because of their reducibility and are susceptible to browning reaction when coexisted with amino acids and/or proteins and to readily deteriorate their quality. To overcome such a problem, it is only known a method to convert reducing partial ,starch hydrolysates into sugar alcohols using a high-pressure hydrogenation method, etc. In actual use, the method, however, needs much heats and instruments constructed under consideration 2 of safety in view of the use of hydrogen, resulting in a higher cost and much labor cost. On the contrary, the aforesaid nonreducing saccharide-forming enzyme as mentioned previously acts on reducing partial starch hydrolysates and forms non-reducing saccharide having a trehalose structure as an end unit, and the reaction proceeds under a relatively-mild condition due to its enzymatic reaction. Using the action of the enzyme, the present inventors established a novel efficient process for non-reducing saccharides using the enzyme, that can overcome conventional drawback residing in reducing partial starch hydrolysates.
Because of these findings, the development of applicable uses for trehalose and non-reducing saccharides have become to be flourished in various fields, and this diversifies the uses of these saccharides and now remarkably increases the demands of the saccharides in a wide variety of fields.
Under these circumstances, a more efficient process for producing trehalose and non-reducing saccharides having a •trehalose structure has been more expected in this art. A key to such an expectation is to establish a non-reducing saccharide-forming enzyme and a trehalose-releasing enzyme with various optimum conditions, and to provide a wide variety of sources for such enzymes usable in the production of the saccharides. Thus, an optimum enzyme can be chosen from various types of enzymes depending on the optimum conditions of another enzymes usable in combination with the above enzymes to produce the desired saccharides, as well as on installations and final uses of the saccharides produced, resulting in an efficient 3 production of the saccharides. Conventionally known nonreducing saccharide-forming enzymes can be grouped into those having optimum temperatures of relatively-lower temperatures of about 40 C or lower, and those having optimum temperatures of relatively-higher temperatures of about 60 C or higher. While conventionally known trehalose-releasing enzymes can be grouped into those having optimum temperatures in a relatively-lower temperature range, about 45 C or lower, and those having optimum temperatures in a relatively-higher temperature range, about C or higher. However, any non-reducing saccharide-forming enzyme and a trehalose-releasing enzyme having an optimum S temperature in a medium temperature range, about 50 C, have never yet been opened.
Among saccharide-related enzymes used in the production of saccharides from starch materials, enzymes as a major group have an optimum temperature in a medium temperature range. Such enzymes may be required in the process for producing the aforesaid trehalose and non-reducing saccharides; No non-reducing saccharide-forming enzyme and no trehalosereleasing enzyme, which have an optimum temperature in a medium temperature range, have not yet been established so that there has not yet been realized a process for producing saccharides in a sufficient yield using either or both of these enzymes together with the above saccharide-related enzymes. Depending on installations for producing saccharides and final uses of them, there have been required enzymes having an optimum temperature in a medium temperature range in their enzymatic 4 reactions. It is far from saying that it has established a process for producing saccharides in a satisfactorily-high yield using a non-reducing saccharide-forming enzyme and a trehalose-releasing enzyme. As described above the establishment of a non-reducing saccharide-forming enzyme and a trehalose-releasing enzyme having an optimum temperature in a medium temperature range, and a process for producing saccharides comprising non-reducing saccharides are in great demand.
SUMMARY OF THE INVENTION In view of this, the first object of the present invention is to provide a purified nonreducing saccharide-forming enzyme having an optimum temperature in a medium temperature range, i.e. in the temperature range of over 40 0 C but below 60 0
C.
The second object of the present invention is to provide an isolated DNA encoding the non-reducing saccharide-forming enzyme.
The third object of the present invention is to provide a process for producing the non-reducing saccharide-forming enzyme.
The fourth object of the present invention is to provide a purified trehalosereleasing enzyme having an optimum temperature in a medium temperature range.
The fifth object of the present invention is to provide an isolated DNA encoding the trehalose-releasing enzyme.
The sixth object of the present invention is to provide a process for producing the trehalose-releasing enzyme.
o 5] 5 13/02/03,mcl0828.speci,5 The seventh object of the present invention is to provide a microorganism capable of producing the non-reducing saccharide-forming enzyme and/or the trehalose-releasing enzyme.
The eighth object of the present invention is to provide a process for producing saccharides comprising nonreducing saccharides, which uses the non-reducing saccharideforming enzyme and/or the trehalose-releasing enzyme.
In order to attain the above objects, the present inventors extensively screened microorganisms, that can overcome the objects, in soils. As a result, they found that a microorganism newly isolated from a soil in Ako-shi, Hyogo, SJapan, produced enzymes that can solve the above objects. The present inventors isolated separatory the desired non-reducing saccharide-forming enzyme and trehalose-releasing enzyme from the microorganism, and then identified their properties, revealing that the enzymes both had an optimum temperature in a medium temperature range. The identification of the a.* microorganism confirmed that it was a novel microorganism of the genus Arthrobacter, and named Arthrobacter sp. S34. The microorganism was deposited on August 6, 1998, in the National Institute of Bioscience and Human-Technology Agency of Industrial Science and Technology, Higashi 1-1-3, Tsukuba-shi, Ibaraki, Japan, and accepted and has been maintained by the institute under the accession number of FERM BP-6450.
The present inventors continued studying, isolated DNAs encoding the above-identified enzymes from the 6 microorganism, Arthrobacter sp. S34, FERM BP-6450, decoded the nucleotide sequences, and determined the amino acid sequences of the enzymes. The inventors confirmed that Arthrobacter sp.
S34, FERM BP-6450, and transformants, into which the DNAs obtained in the above had been introduced in a usual manner, produced desired amounts of enzymes. It was also confirmed that the enzymes thus obtained can be advantageously used in producing saccharides which comprise trehalose and non-reducing saccharides having a trehalose structure in a medium temperature range. The present invention was made based on these findings.
S* The first object of the present invention is solved by a novel non-reducing saccharide-forming enzyme that forms a non-reducing saccharide having a trehalose structure as an end unit from reducing partial starch hydrolysates, and has an optimum temperature in a medium temperature range.
The second object of the present invention is solved by a DNA encoding the non-reducing saccharide-forming enzyme.
The third object of the present invention is solved by a process for producing the non-reducing saccharide-forming enzyme, characterized in that it comprises the steps of culturing a microorganism capable of producing the enzyme, and collecting the produced enzyme from the culture.
The fourth object of the present invention is solved by a novel trehalose-releasing enzyme which specifically hydrolyses a non-reducing saccharide having a trehalose structure as an end unit and a glucose polymerization degree of 7 at least 3 at a site between a trehalose part and a part of the resting, and which has an optimum temperature in a medium temperature range.
The fifth object of the present invention is solved by a DNA encoding the trehalose-releasing enzyme.
The sixth object of the present invention is solved by a process for producing the trehalose-releasing enzyme, characterized in that it comprises the steps of culturing a microorganism capable of producing the enzyme, and collecting the produced enzyme from the culture.
The seventh object of the present invention is solved by a microorganism selected from Arthrobacter sp. S34, FERM BP- 6450, and mutants thereof.
The eighth object of the present invention is solved by a process for producing saccharides, comprising the steps of allowing the either or both of the above enzymes to act on reducing partial starch hydrolysates to produce non-reducing saccharides, and collecting the non-reducing saccharides or saccharide compositions having a relatively-low reducibility and containing the non-reducing saccharides.
Brief Description of the Accompanying Drawings FIG. 1 is a figure that 'shows the influence of temperature on the activity of a non-reducing saccharide-forming enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the 8 a a.
a a..
present invention.
FIG. 2 is a figure that shows the influence of pH on the activity of a non-reducing saccharide-forming enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 3 is a figure that shows the influence of temperature on the stability of a non-reducing saccharideforming enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 4 is a figure that shows the influence of pH on the stability of a non-reducing saccharide-forming enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 5 is a restriction map of the recombinant DNA pGY1 according to the present invention. The bold line shows the nucleotide sequence from Arthrobacter sp. S34, FERM BP-6450.
The black arrow within the bold line shows a nucleotide sequence encoding the present non-reducing saccharide-forming enzyme, while the oblique arrow shows a nucleotide sequence encoding the present trehalose-releasing enzyme.
FIG. 6 is a restriction map of the recombinant DNA pGY2 according to the present invention. The bold line shows the nucleotide sequence from Arthrobacter sp. S34, FERM BP-6450.
The black arrow within the bold line shows a nucleotide sequence encoding the present non-reducing saccharide-forming enzyme.
FIG. 7 is a restriction map of the recombinant DNA 9 pGY3 according to the present invention. The black arrow shows the nucleotide sequence, encoding the present non-reducing saccharide-forming enzyme, from Arthrobacter sp. S34, FERM BP- 6450.
FIG. 8 is a figure that shows the influence of temperature on the activity of a trehalose-releasing enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 9 is a figure that shows the influence of pH on the activity of a trehalose-releasing enzyme from Arthrobacter Ssp. S34, FERM BP-6450, according to the present invention.
FIG. 10 is a figure that shows the influence of temperature on the stability of a trehalose-releasing enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 11 is a figure that shows the influence of pH on the stability of a trehalose-releasing enzyme from Arthrobacter sp. S34, FERM BP-6450, according to the present invention.
FIG. 12 is a restriction map of the recombinant DNA pGZ2 according to the present invention. The bold line shows the nucleotide sequence from Arthrobacter sp. S34, FERM BP-6450.
The oblique arrow within the bold line shows a nucleotide sequence encoding the present trehalose-releasing enzyme.
FIG. 13 is a restriction map of the recombinant DNA pGZ3 according to the present invention. The oblique arrow shows the nucleotide sequence from Arthrobacter sp. S34, FERM 10 BP-6450.
Detailed Description of the Invention The present invention relates to a non-reducing saccharide-forming enzyme and a trehalose-releasing enzyme, and a process for producing a saccharide using either or both of the enzymes. The wording "non-reducing saccharide-forming enzyme" as referred to in the present invention represents an enzyme which has an action of forming a non-reducing saccharide having a trehalose structure as an end unit from reducing partial S* starch hydrolysates. The wording "trehalose-releasing enzyme" as referred to in the present invention represents an enzyme which specifically hydrolyses a non-reducing saccharide having a trehalose structure as an end unit and a glucose polymerization degree of at least 3 at a site between the trehalose part and the resting part. The wording "a medium temperature range" as referred to in the present invention represents a middle temperature range in reaction temperatures which are conventionally used in producing saccharides from starch materials by an enzymatic reaction. In most cases of such processes, different reaction temperatures of about 10 C to about 100 C and around the temperatures are used. The nonreducing saccharide-forming enzyme according to the present invention has an action as such an enzyme and has an optimum temperature in a medium temperature range, preferably a temperature range over 40 C but less than 60 C, and more 11 preferably it has an optimum pH in an acid pH range in addition to the optimum temperature. The trehalose-releasing enzyme according to the present invention has an action as such an enzyme and has an optimum temperature in a medium temperature range, preferably a temperature range over 45 C but below 600 C, and more preferably it has an optimum pH in an acid pH range in addition to the optimum temperature. These present enzymes should not be restricted to their origins and sources.
The activity of the present non-reducing saccharideforming enzyme is assayed as follows: One ml of an enzyme solution is added to four ml of 1.25 w/v maltopentaose as a substrate in 20 mM phosphate buffer (pH and the mixture solution is incubated at 50 C for 60 min. The reaction mixture is heated at 100 C for 10 min to suspend the enzymatic reaction, and the reaction mixture is precisely diluted by 10 times with *oo deionized water, followed by determining the reducing power of the diluted solution on the Somogyi-Nelson's method. As a control, an enzyme solution, which had been heated at 100°C for min to inactivate the enzyme, is treated similarly as above.
One unit activity of the present enzyme is defined as the amount *oe of enzyme which eliminates the reducing power of that of one p mole of maltopentaose per minute when determined with the abovementioned assay. The optimum temperature of the enzyme as referred to in the present invention is determined in accordance with the assay; It is assayed by adjusting the enzymatic reaction temperature at different temperatures including allowing a prescribed amount of the enzyme to act on the 12 substrate at the different temperatures according to the assay, and determining the reduction level of reducing power at the temperatures in accordance with the assay, followed by comparing the determined reduction levels one another and determining the optimum temperature of the present enzyme that showed a maximum temperature.
The activity of the present trehalose-releasing enzyme is assayed as follows: One ml of an enzyme solution is added to four ml of 1.25 w/v maltotriosyltrehalose, amaltotetraosyl-a-D-glucoside, as a substrate, in 20 mM phosphate buffer (pH and the mixture solution is incubated at for 30 min, followed by suspending the enzymatic reaction by the addition of the Somogyi copper solution and assaying the m.as reducing power by the Somogyi-Nelson's method. As a control, it is similarly assayed using an enzyme solution which has been inactivated by heating at 100°C for 10 min. One unit activity of the present enzyme is defined as the amount of enzyme which increases the reducing power of one p mole of glucose per minute when determined with the above-mentioned assay. The optimum mass, temperature of the enzyme as referred to in the present invention is determined in accordance with the assay; It is assayed by adjusting the enzymatic reaction temperature at the different temperatures including 50°C, allowing a prescribed amount of the enzyme to act on the substrate at the temperatures according to the assay, and determining the increased level of reducing power at the different temperatures in accordance with the assay, followed by comparing the determined increased levels 13 one another and determining the optimum temperature of the present enzyme that showed a maximum temperature.
Explaining the present non-reducing saccharide-forming enzyme based on the amino acid sequence, the enzyme has the amino acid sequence of SEQ ID NO:1 as a whole, and has the amino acid sequences of SEQ ID NOs:2 to 6 as partial amino acid sequences in some cases. In addition to these enzymes having the whole of the above-identified amino acid sequences, the present invention includes another types of enzymes which comprise a part of any one of the amino acid sequences selected therefrom or which have both the action as the present. non- S. *S reducing saccharide-forming enzyme and the above-identified
S
optimum temperature. Examples of the amino acid sequences of such enzymes are those which contain, within the amino acid sequences, a partial amino acid sequence or an amino acid residue that are related to the expression of the properties of the present non-reducing saccharide-forming enzyme, and which go one or more amino acids are replaced with different amino acids,
S
added thereunto and/or deleted therefrom other than the above See... partial amino acid sequence or the amino acid residue. Examples of the amino acid sequences replaced with different amino acids as referred to in the present invention include those which less than 30% and preferably less than 20% of the amino acid sequences composing the amino acid sequence of SEQ ID NO:l are replaced with another amino acids which have similar properties and structures to respective ones to be replaced. Examples of groups of such amino acids are a group of aspartic acid and 14 glutamic acid as acid amino acids, one of lysine, arginine, and histidine as basic amino acids, one of asparagine and glutamine as amid-type amino acids, one of serine and threonine as hydroxyamino acids, and one of valine, leucine and isoleucine as branched-chain amino acids. Examples of another amino acid sequences of the present enzyme containing a part of any one of the amino acid sequences selected from SEQ ID NOs:1 to 6 are those which might have a substantially similar stereo-structure to the one of the amino acid sequence of SEQ ID NO:1, i.e., replacement, deletion and/or addition of amino acid(s) are introduced into the amino acid sequence of SEQ ID NO:1. The stereo-structure of proteins is estimable by screening commercially available databases for stereo-structures of proteins which have amino acid sequences related to the aiming ones and have revealed stereo-structures, referencing the screened stereo-structures, and using commercially available soft wares for visualizing stereo-structures. The aboveo. identified amino acid sequence of the present non-reducing saccharide-forming enzyme has a homology of at least 57%, ooo 0 preferably at least 70%, and more preferably at least 80% to SEQ ID NO:1.
As described above, the non-reducing saccharideforming enzyme should not be restricted to a specific origin/ source. Examples of such are those derived from microorganisms, those of the genus Arthrobacter, Arthrobacter sp. S34, FERM BP-6450, and its mutants. The mutants can be obtained by 15 treating in a usual manner Arthrobacter sp. S34, FERM BP-6450, with known mutagens such as N-methyl-N'-nitro-Nnitrosoguanidine, ethyl methanesulfonate, ultraviolet, and transposon; screening the desired mutants capable of producing a non-reducing saccharide-forming enzyme and having an optimum temperature at temperatures in a medium temperature range, and usually at temperatures in the range of over 40 C but below C. The enzyme from Arthrobacter sp. S34, FERM BP-6450, usually has the amino acid sequences of SEQ ID NOs:l to 6.
Another non-reducing saccharide-forming enzymes from microorganisms of mutants Arthrobacter sp. S34, FERM BP-6450, and another microorganisms comprise the whole or a part of any one of the amino acid sequences of SEQ ID NOs:l to 6. Concrete examples of another enzymes include recombinant enzymes which act as the present non-reducing saccharide-forming enzyme and S have an optimum temperature at temperatures in a medium temperature range, and usually at temperatures of over 40 C but below 60 C. The recombinant enzymes can be obtainable by applying the recombinant DNA technology for the DNA encoding the present non-reducing saccharide-forming enzyme, and have the whole or a part of any one of the amino acid sequences of SEQ ID NOs:l to 6.
Most of the non-reducing saccharide-forming enzyme according to the present invention has the following physicochemical properties: Action 16 Forming a non-reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysates having a degree of glucose polymerization of 3 or higher; Molecular weight About 75,000±10,000 daltons on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE); Isoelectric point (pI) About 4.5±0.5 on isoelectrophoresis using ampholyte; Optimum temperature About 50 C when incubated at pH 6.0 for min; Optimum pH About 6.0 when incubated at 50 C for min; Thermal stability Stable up to a temperature of about 55 C when incubated at pH 7.0 for 60 min; and pH Stability Stable at pHs of about 5.0 to about 10.0 when incubated at 4 C for 24 hours.
The present non-reducing saccharide-forming enzyme can be obtained in a prescribed amount by the later described present process for producing the same.
17 The present invention provides a DNA encoding the present non-reducing saccharide-forming enzyme. Such a DNA is quite useful in producing the enzyme in the form of a recombinant protein. In general, the DNA includes those which encode the enzyme independently of its origin/source. Examples of such a DNA are those which contain the whole or a part of the nucleotide sequence of SEQ ID NO:7 or complementary ones thereunto. The DNA comprising the whole of the nucleotide sequence of SEQ ID NO:7 encodes the amino acid sequence of SEQ ID NO:1. The DNAs, which contain the whole or a part of the nucleotide sequence of SEQ ID NO:7, include those which have an amino acid sequence relating to the expression of the properties of the present non-reducing saccharide-forming enzyme, and have a nucleotide sequence corresponding to the animo acid sequence, and the nucleotide sequence of SEQ ID NO:7 introduced with a replacement, deletion and/or addition of one or more bases while retaining the nucleotide sequence relating to the expression of the properties of the present non-reducing saccharide-forming enzyme. The DNAs according to the present invention should include those which one or more bases are replaced with different ones based on the degeneracy of genetic code. Also the DNAs according to the present invention include those which comprise the nucleotide sequences that encode the present nonreducing saccharide-forming enzyme and further comprise additional one or more another nucleotide sequences selected from the group consisting of ribosome-binding sequences such as an initiation codon, termination codon, and Shine-Dalgarno 18 sequence; nucleotide sequences encoding signal peptides, recognition sequences for appropriate restriction enzymes; nucleotide sequences to regulate the expression of genes for promotor and enhancers; and terminators, all of which are generally used in recombinant DNA technology for producing recombinant proteins. For example, since a part of and the whole of the nucleotide sequence of SEQ ID NO:8 function as ribosome-binding sequences, DNAs to which the part of and the whole of the nucleotide sequence of SEQ ID NO:8 are ligated upstream of the nucleotide sequences encoding the present nonreducing saccharide-forming enzyme can be arbitrarily used in producing the enzyme as a recombinant protein.
As described above, the DNAs encoding the present nonreducing saccharide-forming enzyme should not be restricted to their origins/sources, and they are preparable by screening DNAs .from different sources based on hybridization with a DNA comprising a nucleotide sequence which encodes at least a part of the amino acid sequence of the enzyme, eg., the amino acid sequence of SEQ ID NO:1. Actual examples of these sources are Smicroorganisms of the genus Arthrobacter, and preferably, Arthrobacter sp. S34, FERM BP-6450, and its mutants, all of which produce the non-reducing saccharide-forming enzyme. To screen the microorganisms, conventional methods used in this field for screening or cloning DNAs such as screening methods of recombinant libraries, PCR method, and their modified methods. As a result of screening, the desired DNAs can be 19 obtained by collecting in a usual manner DNAs confirmed with the expected hybridization. Generally, the DNAs thus obtained comprise a part of or the whole of the nucleotide sequence of SEQ ID NO:7. For example, a DNA which comprises the whole of the nucleotide sequence of SEQ ID NO:7 is generally obtained from Arthrobacter sp. S34, FERM BP-6450. DNAs comprising a part of the nucleotide sequence of SEQ ID NO:7 can be obtained by similarly screening DNAs from microorganisms as sources other than the above strain, capable of producing the present nonreducing saccharide-forming enzyme. Such DNAs can be prepared by selecting DNAs, which encode the enzymes having the properties of the present enzyme, from DNAs into which have been introduced a replacement, addition and/or deletion of one or more bases of the above-mentioned DNAs by using one or more conventional mutation-introducing methods. The DNAs can be also obtained by applying conventional chemical syntheses based on the nucleotide sequence encoding the present non-reducing saccharide-forming enzyme, one of SEQ ID NO:7. Once in hand, the DNAs according to the present invention can be easily amplified to the desired level by applying or using PCR method and autonomously-replicable vectors.
The present DNA encoding the non-reducing saccharideforming enzyme include those in the form of recombinant DNAs which the DNAs have been introduced into appropriate vectors.
The recombinant DNAs can be relatively-easily preparable by recombinant DNA technology in general if only the DNAs are available. Any types of vectors can be used in the present 20 invention as long as they autonomously replicable in appropriate hosts. Examples of such vectors are pUC18, pBluescript II pKK223-3, kgt.XC, etc., which use Escherichia coli as a host; pUB110, pTZ4, pC194, p1l, 1 105, etc., which use microorganisms of the genus Bacillus; and pHY300PLK, pHV14, TRp7, YEp7, pBS7, etc., which use two or more microorganisms as hosts. The methods to insert the present DNA into such vectors in the present invention may be conventional ones generally used in this field. A gene containing the present DNA and an autonomously-replicable vector are first digested with a restriction enzyme and/or ultrasonic disintegrator, then the resultant DNA fragments and vector fragments are ligated. The ligation is facilitated by the use of restriction enzymes which specifically act on the cleavage of the DNA, especially, KpnI, AccI, BamHI, BstXI, EcoRI, HindIII, NotI, PstI, SacI, Sall, SmaI, Spel, XbaI, XhoI, etc. To ligate DNA fragments and vectors, firstly they may be annealed if necessary, then subjected to the action of a DNA ligase in vivo or in vitro.
The recombinant DNA thus obtained can be replicable without substantial limitation in an appropriate host.
The present DNA encoding the non-reducing saccharideforming enzyme further includes transformants which the DNA has been introduced into appropriate vectors. The transformants can be easily preparable by introducing the DNA or recombinant DNA obtained in the above into appropriate hosts to transform them.
As the hosts, microorganisms and cells from plants and animals, 21 which are used conventionally in this field and chosen depending on the vectors in the recombinant DNA, can be used. The microorganisms as hosts include those of the genera Escherichia, Bacillus, and Arthrobacter, and another actinomycetes, yeasts, fungi, etc. To introduce the present DNA into these host microorganisms, conventional competent cell method and protoplast method can be used. The present DNA, which encodes the non-reducing saccharide-forming enzyme introduced into the transformants in the present invention, may be present in a separatory form from chromosomes or in an incorporated form into chromosomes. The DNA incorporated into hosts' chromosomes has a character of being stably retained therein and may be advantageously used in producing the present recombinant protein.
The present non-reducing saccharide-forming enzyme can be obtained in a desired amount by a process for producing the enzyme characterized in that it comprises the steps of culturing microorganisms capable of producing the enzyme, and collecting the produced enzyme from the culture. The microorganisms used in the process can be used independently of the genus or the species as long as they produce the enzyme. Examples of such microorganisms are microorganisms of the genus Arthrobacter, Arthrobacter sp. S34, FERM BP-6450, and mutants thereof, as well as transformants obtainable by introducing the present DNA encoding the enzyme into appropriate hosts.
Any nutrient culture media used in culturing the 22 process for producing the present non-reducing saccharideforming enzyme can be used as long as the aforesaid microorganisms grow therein and produce the enzyme without restriction to a specific nutrient culture medium. Generally, the nutrient culture media contain carbon and nitrogen sources, and if necessary minerals may be added. Examples of the carbon sources are saccharides such as dextrins, starches, partial starch hydrolysates, glucose, etc., and are saccharidecontaining substances such as molasses and yeast extracts, and organic acids such as glucuronic acid and succinic acid. The Sconcentration of the carbon sources is chosen depending on the 4 types used, usually 30 w/v and preferably 15 w/w or lower.
Examples of the nitrogen sources appropriately used in the present invention are inorganic-nitrogen-containing substances such as ammonium salts, nitrate, etc.; organic-nitrogencontaining substances such as urea, corn steep liquor, casein, peptone, yeast extract, beef extract, etc. Depending on use, it is selectively used among inorganic ingredients such as salts of calcium, magnesium, potassium, sodium, phosphoric acid, manganese, zinc, iron, copper, molybdenum, cobalt, etc.
The culture conditions used for producing the present enzyme can be used selectively from appropriate conditions suitable for growing respective microorganisms used. For example, in the case of using microorganisms of the genus Arthrobacter including Arthrobacter sp. S34, FERM BP-6450, the cultivation temperature is usually in the range of 20-50 C, and preferably 25-37°C; the cultivation pH is usually in the range 23 of pH 4-10, and preferably pH 5-9; and the cultivation time is in the range of 10-150 hours. With these conditions, the microorganisms are cultured under aerobic conditions. When used transformants prepared by introducing into appropriate hosts the present DNA encoding the present non-reducing saccharide-forming enzyme, the transformants are cultured under aerobic conditions at conditions selected from the culture conditions such as the culture temperatures of 20-65 C, the culture pH of 2-9, and the culture time of 1-6 days, although they vary depending on the genus, species, strains or types of microorganisms and vectors.
The cultures thus obtained generally contain the present enzyme in cell fractions. In the case of culturing transformants obtained by using as hosts the microorganisms of the genus Bacillus, the resulting cultures may contain the present enzyme in supernatant fractions depending on vectors used to transform the hosts. The content of the present enzyme in the cultures thus obtained is usually 0.01-1,000 units per ml of the culture, though it varies depending on the genus, species or strains of oeoo the microorganisms and culture conditions used.
a The present non-reducing saccharide-forming enzyme is collected from the resulting cultures. The collection method is not restricted; The present enzyme can be obtained by separating and collecting any one of fractions of cells and culture supernatants found with a major activity of the enzyme, and if necessary subjecting the collected fraction to an appropriate purification method to collect a purified fraction containing the enzyme. To separate the fractions of cells and 24 culture supernatants of the cultures, conventional solid-liquid separation methods such as centrifugation and filtration using precoat filters and plain- and hollow fiber- membranes can be arbitrarily used. The desired fractions are collected from the separated fractions of cells and culture supernatant. For the fraction of cells, the cells are disrupted into a cell disruptant which is then separated into a cell extract and an insoluble cell fraction, followed by collecting either of the desired fractions. The insoluble cell fraction can be solubilized by conventional methods, if necessary. As a method to disrupt cells, any one of techniques of ultrasonication, treatment with cell-wall-lysing enzymes such as lysozyme and glucanase, and load of mechanical press can be arbitrarily used.
To disrupt cells the cultures can be directly treated with any one of the above techniques, and then resulting mixtures are treated with any one of the above solid-liquid separation methods to collect a liquid fraction. Thus a cell extract can 4* be arbitrarily obtained.
The methods used for more purifying the present nonreducing saccharide-forming enzyme include conventional ones to 4 purify saccharide-related enzymes in general such as salting out, dialysis, filtration, concentration, gel filtration chromatography, ion-exchange chromatography, hydrophobic chromatography, reverse-phase chromatography, affinity chromatography, gel electrophoresis and, isoelectric point electrophoresis. These methods can be used in combination depending on purposes. From the resulting fractions separated 25 by these methods, fractions with a desired activity assayed by the method for non-reducing saccharide-forming enzyme are collected to obtain the present non-reducing saccharide-forming enzyme purified to a desired level. According to the methods in the later described Examples, the present enzyme can be purified up to an electrophoretically homogenous level. As described above, the present method provide the present nonreducing saccharide-forming enzyme in the form of a culture, cell fraction, fraction of culture supernatant, cell disruptant, cell extract, soluble and insoluble cell-fraction, partially S• purified enzyme fraction, and purified enzyme fraction. These fractions may contain another type of the present trehalosereleasing enzyme. The non-reducing saccharide-forming enzyme thus obtained can be immobilized in a usual manner before use.
The methods for immobilization are, for example, binding method to ion exchangers, covalent bonding/adsorption to and on resins and membranes, and entrapping immobilization method using high 0* S molecular weight substances. The non-reducing saccharideforming enzyme thus obtained can be arbitrarily used in o. processes for producing saccharides including the later described present process for producing saccharide.
Particularly, since the present non-reducing saccharide-forming enzyme has an optimum temperature in a medium temperature range and preferably has an optimum pH in an acid pH range, it can be advantageously used to produce saccharides when used in combination with the later described present trehalose-releasing enzyme, starch-debranching enzyme having an optimum pH in an 26 acid pH range, and cyclomaltodextrin glucanotransferase that effectively acts at medium temperature range.
Explaining the present trehalose-releasing enzyme based on the amino acid sequence, the enzyme has the amino acid sequence of SEQ ID NO:9 as a whole, and has the amino acid sequences of SEQ ID NOs:lO to 16 as partial amino acid sequences in some cases. In addition to these enzymes having the whole of the above-identified amino acid sequences, the present invention includes another types of enzymes which comprise a part of any one of the amino acid sequences selected therefrom or which have both the action as the present trehalose-releasing enzyme and the above-identified optimum temperature. Examples of the amino acid sequences of such enzymes are those which contain, within the amino acid sequences, a partial amino acid sequence or an amino acid residue which relate to the expression of the properties of the present non-reducing saccharide-forming enzyme, and which one or more amino acids are replaced with "different amino acids, added thereunto and/or deleted therefrom other than the above partial amino acid sequence or the amino acid residue. Examples of amino acid sequences replaced with different amino acids as referred to in the present invention include those which less than 30% and preferably less than of the amino acid sequences composing the amino acid sequence of SEQ ID NO:9 are replaced with another amino acids which have similar properties and structures to respective ones to be replaced. Examples of groups of such amino acids are a group of aspartic acid and glutamic acid as acid amino acids, one of 27 lysine, arginine, and histidine as basic amino acids, one of asparagine and glutamine as amid-type amino acids, one of serine and threonine as hydroxyamino acids, and one of valine, leucine and isoleucine as branched-chain amino acids. Examples of another amino acid sequences of the enzyme containing a part of any one of the amino acid sequences selected from SEQ ID NOs:9 to 16 are those which might have a substantially similar stereostructure to the one of the amino acid sequence of SEQ ID NO:9, replacement, deletion and/or addition of amino acid(s) are introduced into the amino acid sequence of SEQ ID NO:9. The stereo-structure of proteins is estimable by screening commercially available databases for stereo-structures of proteins which have amino acid sequences related to the aiming ones and have revealed stereo-structures, referencing the screened stereo-structures, and using commercially available soft wares for visualizing stereo-structures. The aboveidentified amino acid sequence of the present trehalosereleasing enzyme has a homology of at least 60%, preferably at least 70%, and more preferably at least 80% to SEQ ID NO:9.
As described above, the trehalose-releasing enzyme should not be restricted to a specific origin/source. Examples of such are those derived from microorganisms, those of the genus Arthrobacter, Arthrobacter sp. S34, FERM BP-6450, and mutants thereof. The mutants can be obtained by treating in a usual manner Arthrobacter sp. S34, FERM BP-6450, with known mutagens such as N-methyl-N'-nitro-N-nitrosoguanidine, ethyl 28 methanesulfonate, ultraviolet, and transposon; screening the desired mutants capable of producing a non-reducing saccharideforming enzyme and having an optimum temperature at temperatures in a medium temperature range, and usually at temperatures in the range of over 45 C but below 60 C. The enzyme from Arthrobacter sp. S34, FERM BP-6450, usually has the amino acid sequences of SEQ ID NOs:9 to 16. Another non-reducing saccharide-forming enzymes from microorganisms of mutants Arthrobacter sp. S34, FERM BP-6450, and another microorganisms comprise the whole or a part of any one of the amino acid sequences of SEQ ID NOs:9 to 16. Concrete examples of another enzymes include recombinant enzymes which act as the present trehalose-releasing enzyme and have an optimum temperature at temperatures in a medium temperature range, and usually at temperatures of over 45°C but below 60 C. The recombinant enzymes can be obtainable by applying the recombinant DNA technology for the DNA encoding the present trehalose-releasing o enzyme, and have the whole or a part of any one of the amino acid sequences of SEQ ID NOs:9 to 16.
Most of the trehalose-releasing enzyme according to the present invention has the following physicochemical properties: Action Specifically hydrolyses a non-reducing saccharide having a trehalose structure as an end unit at a site between a part of the 29 trehalose structure and a part of the resting; Molecular weight About 62,000±5,000 daltons on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-
PAGE);
Isoelectric point (pI) About 4.7±0.5 on isoelectrophoresis using ampholyte; Optimum temperature About 50°C to about 55 C when incubated at pH 6.0 for 30 min; Optimum pH About 6.0 when incubated at 50 C for 30 min; Thermal stability Stable up to a temperature of about 50 C when incubated at pH 7.0 for 60 min; and pH Stability Stable at pHs of about 4.5 to about 10.0 when incubated at 4 C for 24 hours.
The present trehalose-releasing enzyme can be obtained in a prescribed amount by the later described present process for producing the same.
The present invention provides a DNA encoding the present trehalose-releasing enzyme. Such a DNA is quite useful in producing the enzyme in the form of a recombinant protein.
In general, the DNA includes those which encode the enzyme independently of its origin/source. Examples of such a DNA are 30 those which contain the whole or a part of the nucleotide sequence of SEQ ID NO:17 or complementary ones thereunto. The DNA comprising the whole of the nucleotide sequence of SEQ ID NO:17 encodes the amino acid sequence of SEQ ID NO:9. The DNAs, which contain the whole or a part of the nucleotide sequence of SEQ ID NO:17, include those which have a nucleotide sequence corresponding to an amino acid sequence relating to the expression of the properties of the present non-reducing saccharide-forming enzyme, and have the nucleotide sequence of SEQ ID NO:17 introduced with a replacement, deletion and/or addition of one or more bases while retaining the nucleotide S: sequence relating to the expression of the properties of the present trehalose-releasing enzyme. The DNAs according to the present invention should include those which one or more bases are replaced with different ones based on the degeneracy of genetic code. Also the DNAs according to the present invention include those which comprise the nucleotide sequences that "encode the present trehalose-releasing enzyme and further comprise additional one or more another nucleotide sequences selected from the group consisting of ribosome-binding sequences such as an initiation codon, termination codon, and Shine- Dalgarno sequence; nucleotide sequences encoding signal peptides, recognition sequences for appropriate restriction enzymes; nucleotide sequences to regulate the expression of genes for promotor and enhancers; and terminators, all of which are generally used in recombinant DNA technology for producing recombinant proteins. For example, since a part of and the 31 whole of the nucleotide sequence of SEQ ID NO:8 function as ribosome-binding sequences, DNAs to which the part of and the whole of the nucleotide sequence of SEQ ID NO:8 are ligated upstream of the nucleotide sequences encoding the present trehalose-releasing enzyme can be arbitrarily used in producing the enzyme as a recombinant protein.
As described above, the DNAs encoding the present trehalose-releasing enzyme should not be restricted to their origins/sources, and they are preparable by screening DNAs from different sources based on hybridization with a DNA comprising a nucleotide sequence which encodes at least a part of the amino acid sequence of the enzyme, eg., the amino acid sequence of SEQ ID NO:9. Actual examples of these sources are microorganisms of the genus Arthrobacter, and preferably, Arthrobacter sp. S34, FERM BP-6450, and its mutants, all of which produce the nonreducing saccharide-forming enzyme. To screen the microorganisms, conventional methods used in this field for screening or cloning DNAs such as screening methods of recombinant libraries, PCR method, and their modified methods.
As a result of screening, the desired DNAs can be obtained by collecting in a usual manner DNAs confirmed with the expected hybridization. Generally, the DNAs thus obtained comprise a part of or the whole of the nucleotide sequence of SEQ ID NO:17.
For example, a DNA which comprises the whole of the nucleotide sequence of SEQ ID NO:17 is generally obtained from Arthrobacter sp. S34, FERM BP-6450. DNAs comprising a part of the nucleotide 32 sequence of SEQ ID NO:17 can be obtained by similarly screening DNAs from microorganisms as sources other than the above strain, capable of producing the trehalose-releasing enzyme. Such DNAs can be prepared by selecting DNAs, which encode the enzymes having the properties of the enzyme, from DNAs into which have been introduced a replacement, addition and/or deletion of one or more bases of the above-mentioned DNAs by using one or more conventional mutation-introducing methods. The DNAs can be also obtained by applying conventional chemical syntheses based on the nucleotide sequence encoding the present trehalose-releasing enzyme, one of SEQ ID NO:17. Once in hand, the DNAs according to the present invention can be easily amplified to the desired level by applying or using PCR method and autonomously-replicable vectors.
The present DNA encoding the trehalose-releasing enzyme include those in the form of recombinant DNAs which the DNAs have been introduced into appropriate vectors. The recombinant DNAs can be relatively-easily preparable by recombinant DNA technology in general if only the DNAs are available. Any types of vectors can be used in the present invention as long as they autonomously replicable in appropriate hosts. Examples of such vectors are pUC18, pBluescript II pKK223-3, kgt-.C, etc., which use Escherichia coli as a host; pUB110, pTZ4, pC194, pll, 0105, etc., which use microorganisms of the genus Bacillus; and pHY300PLK, pHV14, TRp7, YEp7, pBS7, etc., which use two or more microorganisms as 33 hosts. The methods to insert the present DNA into such vectors in the present invention may be conventional ones generally used in this field. A gene containing the present DNA and an autonomously-replicable vector are first digested with a restriction enzyme and/or ultrasonic disintegrator, then the resultant DNA fragments and vector fragments are ligated. The ligation is facilitated by the use of restriction enzymes which specifically act on the cleavage of the DNA, especially, KpnI, AccI, BamHI, BstXI, EcoRI, HindIII, NotI, PstI, SacI, Sall, SmaI, Spel, XbaI, XhoI, etc. To ligate DNA fragments and vectors, firstly they may be annealed if necessary, then subjected to the action of a DNA ligase in vivo or in vitro.
The recombinant DNA thus obtained can be replicable without substantial limitation in an appropriate host.
The present DNA encoding the trehalose-releasing enzyme further includes transformants which the DNA has been introduced into appropriate vectors. The transformants can be easily preparable by introducing the DNA or recombinant DNA obtained in the above into appropriate hosts to transform them.
As the hosts, microorganisms and cells from plants and animals, which are used conventionally in this field and chosen depending on the vectors in the recombinant DNA, can be used. The microorganisms as hosts include those of the genera Escherichia, Bacillus, and Arthrobacter, and another actinomycetes, yeasts, fungi, etc. To introduce the present DNA. into these host microorganisms, conventional competent cell method and 34 protoplast method can be used. The present DNA, which encodes the trehalose-releasing enzyme introduced into the transformants in the present invention, may be present in a separatory form from chromosomes or in an incorporated form into chromosomes.
The DNA incorporated into hosts' chromosomes has a character of being stably retained therein and may be advantageously used in producing the present recombinant protein.
The aforesaid techniques used for obtaining the present DNAs including recombinant DNAs and transformants, and the techniques for obtaining the DNAs and recombinant proteins are commonly used in the art; For example, J. Sumbruck et al.
e in "Molecular Cloning A Laboratory Manual", 2nd edition, published by Cold Spring Harbor Laboratory Press (1989), discloses in detail methods for obtaining desired DNAs and applications for production use of the obtained DNAs. For example, Japanese Patent No. 2,576,970 discloses a method for stabilizing a transformed DNA, which uses as a host a microorganism defective in an aiming gene. Japanese Patent Kokai No. 157,987/88 discloses a vector which effectively expresses an aiming DNA in microorganisms of the genus Bacillus.
Japanese Patent Kohyo No. 502,162/93 discloses a method for stably introducing a desired DNA into a bacterial chromosome.
Japanese Patent Kohyo No. 506,731/96 discloses an efficient production method of a starch hydrolysing enzyme, using recombinant DNA technology. Japanese Patent Kohyo Nos.
500,543/97 and 500,024/98 disclose a host-vector system using 35 fungi for efficient production of recombinant proteins. These methods conventionally used in the art are arbitrarily applicable for the present invention.
In the art, when the desired DNAs are available by the above methods, there have been commonly provided transformants which the DNAs are introduced into appropriate plants and animals, transgenic plants and animals. The present DNA, which encodes the non-reducing saccharide-forming enzyme and the trehalose-releasing enzyme in the form of a DNA introduced into appropriate hosts, also includes the transgenic plants and animals. To obtain the transgenic animals, it is obtained as a whole by a process comprising the DNA which encodes either of the present enzymes alone or together with other desired DNA such as a promotor and enhancer into an appropriate vector selected depending on the species of the host animal, introducing the resulting recombinant DNA into a fertilized egg or embryonic stem cell from the host animal by a method such as micro-injection and electroporation, or by an infection method using recombinant viruses containing the recombinant DNA.
Examples of the host animals are conventional experimental 0 rodents such as mice, rats, and hamsters; and mammals conventionally used as domestic animals such as goats, sheep, pigs, and cows, all of which have an advantage of being bred easily. The resulting cells introduced with the DNA are transplanted in uterine tube or uterus of a pseudopregnancy female animal of the same species as the cells. Thereafter, transgenic animals, which have been introduced with the DNA 36 encoding the present enzymes by applying hybridization or PCR method, are obtained from newborns in a natural or cesarean sectional manner. Thus the present DNA in the form of a transgenic animal can be obtained. Referring to transgenic animals, they are disclosed in detail in "Jikken-Igaku-Bessatsu- Shin-Idennshi-Kogaku-Handbook" (Handbook of Genetic Engineering), pp. 269-283 (1996), edited by Masami MATSUMURA, Hiroto OKAYAMA, and Tadashi YAMAMOTO, published by Yodosha Co., Ltd., Tokyo, Japan. The method for obtaining transgenic plants comprises, for example, providing a plasmid as a vector of a microorganism of the genus Agrobacterium infectious to plants, a introducing the DNA encoding either of the present enzymes into the vector, and either introducing the resulting recombinant DNA into plant bodies or protoplasts, or coating heavy metal particles with a DNA including nucleotide sequence encoding eo either of the present enzymes and directly injecting the coated particles into plant bodies or protoplasts using a particle gun.
Although various types of plants can be used as host plants, they generally include edible plants such as potato, soybean, wheat, burley, rice, corn, tomato, lettuce, alfalfa, apple, peach, melon, etc. By applying hybridization or PCR method for the above transformed plant bodies and protoplasts, transformants containing the desired DNA are selected. The transformed protoplasts can be regenerated into plant bodies as the present DNA in the form of transgenic plants. The techniques of transgenic plants are generally disclosed in 37 Genetic Engineering, edited by Jane K. Setlow, published by Plenum Publishing Corporation, NY, USA, Vol. 16, pp. 93-113 (1994). The DNA in the form of the aforesaid transgenic animals and plants can be used as sources of the present non-reducing saccharide-forming enzyme and/or trehalose-releasing enzyme, and used as edible plants and animals which contain trehalose or non-reducing saccharide having a trehalose structure.
The present trehalose-releasing enzyme can be obtained in a desired amount by the present process for producing the enzyme which is characterized in that it comprises culturing a microorganism capable of producing the enzyme in a nutrient culture medium, and collecting the produced enzyme from the resulting culture. Any microorganisms can be used in the present process independently of their genus and species as long as they produce the present trehalose-releasing enzyme.
Examples of such microorganisms are those of the genus Arthrobacter, Arthrobacter sp. S34, FERM BP-6450, and mutants thereof, as well as transformants obtainable by introducing the present- DNA encoding the enzyme into appropriate host microorganisms.
Any nutrient culture media for culturing the process for producing the present trehalose-releasing enzyme can be used as long as the aforesaid microorganisms grow therein and produce the enzyme without restriction to a specific nutrient culture medium. Generally, the nutrient culture media contain carbon and nitrogen sources, and if necessary minerals may be added.
38 Examples of the carbon sources are saccharides such as dextrins, starches, partial starch hydrolysates, glucose, etc., and are saccharide-containing substances such as molasses and yeast extracts, and organic acids such as glucuronic acid and succinic acid. The concentration of the carbon sources is chosen depending on the types used, usually 30 w/v and preferably w/w or lower. Examples of the nitrogen sources appropriately used in the present invention are inorganicnitrogen-containing substances such as ammonium salts, nitrate, etc.; organic-nitrogen-containing substances such as urea, corn steep liquor, casein, peptone, yeast extract, beef extract, etc.
Depending on use, it is selectively used among inorganic ingredients such as salts of calcium, magnesium, potassium, sodium, phosphoric acid, manganese, zinc, iron, copper, molybdenum, cobalt, etc.
The culture conditions used for producing the present trehalose-releasing enzyme can be used selectively from appropriate conditions suitable for growing respective microorganisms used. For example, in the case of using microorganisms of the genus Arthrobacter including Arthrobacter sp. S34, FERM BP-6450, the cultivation temperature is usually in the range of 20-50 C, and preferably 25-37°C; the cultivation pH is usually in the range of pH 4-10, and preferably pH 5-9; and the cultivation time is in the range of 10-150 hours. With these conditions, the microorganisms are cultured under aerobic conditions. When used transformants prepared by introducing into appropriate hosts the present DNA encoding the trehalose- 39 releasing enzyme, the transformants are cultured under aerobic conditions at conditions selected from the culture conditions such as the culture temperatures of 20-65 C, the culture pH of 2-9, and the culture time of 1-6 days, although they vary depending on the genus, species, strains or types of microorganisms and vectors. The cultures thus obtained generally contain the enzyme in cell fractions. In the case of culturing transformants obtained by using as hosts the microorganisms of the genus Bacillus, the resulting cultures may contain the enzyme in supernatant fractions depending on vectors used to transform the hosts. The content of the enzyme in the cultures thus obtained is usually 0.01-3,000 units per ml of the culture, though it varies depending on the genus, species or *ee strains of the microorganisms and culture conditions used.
The present trehalose-releasing enzyme is collected from the resulting cultures. The collection method is not restricted; The enzyme can be obtained by separating and collecting any one of fractions of cells and culture supernatants found with a major activity of the enzyme, and if necessary subjecting the collected fraction to an appropriate e e purification method to collect a purified fraction containing the enzyme. To separate the fractions of cells and culture supernatants of the cultures, conventional solid-liquid separation methods such as centrifugation and filtration using precoat filters and plain- and hollow fiber- membranes can be arbitrarily used. The desired fractions are collected from the separated fractions of cells and culture supernatant. For the 40 fraction of cells, the cells are disrupted into a cell disruptant which is then separated into a cell extract and an insoluble cell fraction, followed by collecting either of the desired fractions. The insoluble cell fraction can be solubilized by conventional methods, if necessary. As a method to disrupt cells, any one of techniques of ultrasonication, treatment with cell-wall-lysing enzymes such as lysozyme and glucanase, and load of mechanical press can be arbitrarily used.
To disrupt cells the cultures can be directly treated with any one of the above techniques, and then resulting mixtures are treated with any one of the above solid-liquid separation methods to collect a liquid fraction. Thus a cell extract can be arbitrarily obtained.
The methods used for more purifying the present trehalose-releasing enzyme include conventional ones to purify saccharide-related enzymes in general such as salting out, a. dialysis, filtration, concentration, gel filtration chromatography, ion-exchange chromatography, hydrophobic chromatography, reverse-phase chromatography, affinity.
chromatography, gel electrophoresis and, isoelectric point electrophoresis. These methods can be used in combination depending on purposes. From the resulting fractions separated by these methods, fractions with a desired activity assayed by the method for trehalose-releasing enzyme are collected to obtain the enzyme purified to a desired level. According to the methods in the later described Examples, the present enzyme can be purified up to an electrophoretically homogenous level. As 41 described above, the present method provide the present trehalose-releasing enzyme in the form of a culture, cell fraction, fraction of culture supernatant, cell disruptant, cell extract, soluble and insoluble cell-fraction, partially purified enzyme fraction, and purified enzyme fraction. These fractions may contain another type of the present non-reducing saccharideforming enzyme. The present trehalose-releasing enzyme thus obtained can be immobilized in a usual manner before use. The methods for immobilization are, for example, binding method to ion exchangers, covalent bonding/adsorption to and on resins and membranes, and entrapping immobilization method using high molecular weight substances. The trehalose-releasing enzyme thus obtained can be arbitrarily used in processes for producing saccharides including the later described present process for producing saccharide. Particularly, since the trehalose- S* C releasing enzyme has an optimum temperature in a medium temperature range and preferably has an optimum pH in an acid pH range, it can be advantageously used to produce saccharides when used in combination with the later described present trehalose-releasing enzyme, starch-debranching enzyme having an optimum pH in an acid pH range, and cyclomatodextrin glucanotransferase that effectively acts at temperatures in a medium temperature range.
The present invention provides a process for producing saccharides comprising non-reducing saccharides by using the aforesaid present enzymes; the process comprising the steps of allowing the non-reducing saccharide-forming enzyme and/or the 42 trehalose-releasing enzyme to act on reducing partial starch hydrolysates to form non-reducing saccharides, and collecting the resulting non-reducing saccharides or saccharide compositions with a lesser reducibility. In the process, the use of one or more another types of non-reducing saccharideforming enzymes and trehalose-releasing enzymes other than the present enzymes, and other saccharide-related enzymes should not be excluded from the present invention. The reducing partial starch hydrolysates used in the process can be used independently of their origins/sources. The non-reducing saccharides as referred to in the present invention include nonreducing saccharides in general such as trehalose and those having a trehalose structure.
The reducing partial starch hydrolysates used in the present process for producing saccharides can be obtained, for example, by liquefying starches or amylaceous substances by conventional methods. The starches include terrestrial starches o.
/such as corn starch, rice starch, and wheat starch; and subterranean starches such as potato starch, sweet potato starch, and tapioca starch. To liquefy these starches, they are generally suspended in water into starch suspensions, preferably, those with a concentration of at least 10 w/w and more preferably those with a concentration of about 20 to about w/w and treated with mechanical, acid and/or enzymatic treatments. Relatively-lower degree of liquefaction is satisfactorily used, preferably, DE (dextrose equivalent) of less than 15, and more preferably DE of less than 10. When 43 liquefied with acids, the starches are treated with hydrochloric acid, phosphoric acid, oxalic acid, etc., and then the resulting mixtures are neutralized with calcium carbonate, calcium oxide, sodium carbonate, etc., to desired pHs before use. To liquefy the starches with enzymes, a-amylase, particularly, and thermostable liquefying a-amylase are satisfactorily used. The liquefied starches thus obtained can be further subjected to the action of a-amylase, maltotriose-forming amylase, maltotetraoseforming amylase, maltopentaose-forming amylase, maltohexaoseforming amylase, etc., and the resulting reaction mixtures can be used as the reducing partial starch hydrolysates. The S: properties of the starch-related enzymes are described in detail in Handbook of Amylases and Related Enzymes, pp.18-81, and pp.
125-142 (1988), published by Pergamon Press.
The reducing partial starch hydrolysates thus obtained are subjected to the action of the present non-reducing saccharide-forming enzyme and/or trehalose-releasing enzyme, and if necessary further subjected to the action of one or more starch-related enzymes such as a-amylase, p-amylase, glucoamylase, starch debranching enzymes such as isoamylase and pullulanase, cyclomaltodextrin glucanotransferase, aglucosidase, and p-fructofuranosidase. Conditions used for enzymatic reactions are those suitable for enzymes used; Usually they are selected from pHs 4-10 and temperatures of 20-70 C and preferably pHs 5-7 and temperatures of 30-60 C.
Particularly, non-reducing saccharides can be effectively produced by enzymatic reactions at temperatures in a medium 44 temperature range, temperatures of over 40 C but below C or over 45 C but below 60 C, and pHs of slight acid or acid pH conditions. The order of allowing the enzymes to act on reducing partial starch hydrolysates is not restricted; one proceeds or follows another one, or plural enzymes can be arbitrarily allowed to act on substrates simultaneously.
The amount of enzymes is appropriately set depending on enzymatic conditions and reaction times, and final uses of non-reducing saccharides or less-reducible saccharide compositions containing thereof. For the present non-reducing saccharide-forming enzyme and trehalose-releasing enzyme, the former is used in an amount of about 0.01 to about 100 units/g solid of reducing partial starch hydrolysates, and the latter is used in an amount of about 1 to about 10,000 units/g solid of reducing partial starch hydrolysates. Cyclomatodextrin glucanotransferase is used in an amount of about 0.05 to about 500 units/g reducing partial starch hydrolysates, d.s.b. The reaction mixtures obtained with these enzymes usually contain trehalose, a-glucosyltrehalose, a-maltosyltrehalose, amaltotriosyltrehalose, a-maltotetraosyltrehalose, or amaltopentaosyltrehalose. In the above process, when used in combination, the present non-reducing saccharide-forming enzyme and trehalose-releasing enzyme along with a starch debranching enzyme and cyclomatodextrin glucanotransferase characteristically more produce a large amount of trehalose and a relatively-lower molecular weight of non-reducing saccharide having a trehalose structure.
45 From the resulting reaction mixtures, non-reducing saccharides and saccharide compositions with a lesser reducibility are collected. In these production steps, conventionally used processed for saccharides can be appropriately selected. The resulting reaction mixtures are subjected to filtration and centrifugation to remove insoluble substances, and then the resultant solutions are purified by decoloration with an activated charcoal, desalted with ion exchangers in H- and OH-form, and concentrated into syrupy products. If necessary, the syrupy products can be further S: purified into non-reducing saccharides with a relatively-high S•purity; In the purification, one or more methods, for example, column chromatographic fractionations such as ion-exchange column chromatography, column chromatography using an activated charcoal or a silica gel; separatory sedimentation using organic acids such as acetone and alcohol; separation using membranes with an appropriate separability; and alkaline treatments to decompose and remove the remaining reducing saccharides. In particular, ion-exchange column chromatography can be suitably *."used in the present invention as an industrial-scale preparation of the object saccharides. Non-reducing saccharides with an improved purity can be arbitrary prepared by, for example, column chromatography using a strongly-acid cation exchange resin as described in Japanese Patent Kokai Nos. 23,799/83 and 72,598/83 to remove concomitant saccharides. In this case, any of fixed-bed, moving bed, and semi-moving methods can be employed.
46 If necessary, the resulting non-reducing saccharides or a relatively-low reducing saccharides containing the nonreducing saccharides can be hydrolyzed by amylases such as aamylase, p-amylase, glucoamylase and a-glucosidase to control their sweetness and reducing power or to lower their viscosity; and the products thus obtained can be further treated with processings where the remaining reducing saccharides are hydrogenated into sugar alcohols to diminish their reducing powder. Particularly, trehalose can be easily prepared by allowing glucoamylase or a-glucosidase to act on the nonreducing saccharides or relatively-low reducing saccharides containing the non-reducing saccharides. A high trehalose content fraction is obtainable by allowing glucoamylase or aglucosidase to act on these saccharides to form a mixture of trehalose and glucose, and subjecting the mixture to the aforesaid purification methods such as column chromatography using ion exchangers to remove glucose. The high trehalose content fraction can be arbitrary purified and concentrated into a syrupy product. If necessary, the syrupy product can be concentrated into a supersaturated solution, followed by crystallizing hydrous or anhydrous crystalline trehalose and recovering the resultant crystal.
To produce hydrous crystalline trehalose, an about w/w solution of trehalose with a purity of about 60 w/w or higher is placed in a crystallizer, and if necessary in the presence of 0.1-20 w/v seed crystal, gradually cooled while stirring at a temperature of 95°C or lower, and preferably at 47 a temperature of 10-90 C to obtain a massecuite containing hydrous crystalline trehalose. Continuous crystallization method to effect crystallization under concentrating conditions in vacuo can be arbitrarily used.
Conventional methods such as separation, block pulverization, fluidized-bed granulation, and spray drying can be employed in the invention to prepare from the massecuite hydrous crystalline trehalose or crystalline saccharides containing the trehalose crystal.
In the case of separation, massecuites are usually subjected to a basket-type centrifuge to separate hydrous crystalline trehalose from a mother liquor, and if necessary the hydrous crystalline trehalose is washed by spraying with a small amount of cold water to facilitate the preparation of hydrous crystalline trehalose with a higher purity. In the case of spray drying, crystalline saccharides with no or substantially free of hygroscopicity are easily prepared by spraying "massecuites with a concentration of 70-85 w/w on a dry solid basis and a crystallinity of about 20-60%, d.s.b., from a nozzle by a high-pressure pump; drying the resultant products with air heated to 60-100 C which does not melt the resultant crystalline powders; and aging the resultant powders for about 1 to about 20 hours while blowing thereto air heated to 30-60 C. In the case of block pulverization, crystalline saccharides with no or substantially free of hygroscopicity are easily prepared by allowing massecuites with a moisture content of 10-20 w/w and a crystallinity of about 10-60%, to 48 stand for about 0.1 to about 3 days to crystallize and solidify the whole contents into blocks; and pulverizing or cutting the resultant blocks.
To produce anhydrous crystalline trehalose, the hydrous crystalline trehalose obtained in the above is dried at a normal or reduced pressure at temperatures of 70-160 C, and preferably at 80-100 C; or a relatively-high concentration and content trehalose solution with a moisture content of less than is placed in a crystallizer, stirred in the presence of a seed crystal at temperatures of 50-160 C, and preferably 140 C to produce a massecuite containing anhydrous crystalline trehalose, and treating the massecuite with methods such as block pulverization, fluidized-bed granulation, and spray drying under relatively-high temperatures and drying conditions.
The non-reducing saccharides or saccharide S S composition, containing thereof with a relatively-low reducibility, thus obtained are low in reducibility and satisfactory in stability; they do not become browning, form indisagreeable smell, and deteriorate the following another materials when mixed and processed with another materials, for example, amino-acid-containing substances such as amino acids, oligopeptides, and proteins. Even with a relatively-low reducibility, the above-identified saccharides have a relatively-low viscosity, and those with a relatively-low average glucose polymerization degree have a relatively-high quality and sweetness. These saccharides can be arbitrarily used in the fields of foods, cosmetics, and pharmaceuticals, 49 etc., as disclosed in Japanese Patent Kokai Nos.66,187/96, 66,188/96, 73,482/96, 73,506/96, 73,504/96, 336,363/96, 9,986/97, 154,493/97, 252,719/97, 66,540/98, and 168,093/98; and Japanese Patent Application Nos. 236,441/97, 256,219/97, 268,202/97, 274,962/97, 320,519/97, 338,294/97, 55,710/98, 67,628/98, 134,553/98 and 214,375/98, which were all applied for by the same applicant as the present applicant.
The following examples describe the present invention in more detail: Example 1 Microorganism capable of producing non-reducing saccharide-forming enzyme and trehalose-releasing enzyme 0* 0 0 The present inventors widely screened soils to isolate a microorganism capable of producing non-reducing saccharide-forming enzyme and trehalose-releasing enzyme. As a result, they isolated a microorganism with such a property from a soil in Ako, Hyogo, Japan, and identified the
S
S" microorganisms in accordance with the method as described in "Biseibutsu-no-Bunrui-to-Dotei" (Classification and Identification of Microorganisms), edited by Takeji Hasegawa, published by Japan Scientific Societies Press, Tokyo, Japan (1985). The results were as follows: Results on cell morphology Characteristics of cells when incubated at 37 C in nutrient agar broth Usually existing a rod form of 0.4-0.5 x 0.8-1.2 pm; Existing in a single form but uncommonly 50 existing in a polymorphic form; Free of motility; Asporogenic; Non-acid fast; and Gram stain Positive.
Characteristics of cells when incubated at 37 C in EYG nutrient agar Exhibiting a growth cycle of rods and cocci.
Results on Cultural property Characteristics of colony formed when incubated at 37 C in nutrient agar broth ~plate .*o Shape Circular colony having a diameter of about 1-2 mm after 2-days incubation; Rim Entire; Projection Convex; Gloss Moistened gloss; Surface Plain; and Color Semi-transparent or cream.
Characteristics of colony formed when incubated at 37 C in nutrient agar broth slant Growth Satisfactory; and Shape Thread-like.
Characteristics of colony formed when incubated at 37 C in agar slant with yeast 51 extract and peptone Growth Satisfactory; and Shape Thread-like.
Characteristics of colony formed when stabcultured at 27 C in nutrient gelatin broth Not liquefying gelatin.
Results on physiological properties Methyl red test Negative VP-test Positive Formation of indole Negative Formation of hydrogen sulfide Negative Hydrolysis of starch Positive Liquefaction of gelatin Negative Utilization of citric acid Positive Utilization of inorganic nitrogen source: Utilizing nitrate but not ammonium salts Formation of pigment Non Urease Negative (11) Oxidase Negative (12) Catalase Positive (13) Growth range Growing at pHs of 4.5-8.0 and temperatures of 20-50 C; and Optimum temperatures of 30-45 C.
(14) Oxygen requirements AerobicQ Utilization of carbon sources L-Arabinose Assimilated D-Glucose Assimilated 52 D-Fructose Not assimilated D-Galactose Not assimilated L-Rhamnose Not assimilated D-Xylose Not assimilated D-Mannose Assimilated Raffinose Not assimilated Trehalose Not assimilated Sucrose Not assimilated Maltose Not assimilated Lactose Not assimilated D-Dulcitol Not assimilated o D-Mannitol Not assimilated Gluconic acid Assimilated Succinic acid Assimilated Nicotinic acid Not assimilated L-Maleic acid Assimilated Sa Acetic acid Assimilated Lactic acid Assimilated (16) Acid formation from sugars L-Arabinose Slightly formed D-Glucose Slightly formed D-fructose Not formed D-Galactose Slightly formed L-Rhamnose Slightly formed D-Xylose Slightly formed Glycerol Slightly formed Raffinose Not formed Trehalose Slightly formed 53 Sucrose Slightly formed Maltose Slightly formed Lactose Not formed (17) Utilization of amino acid Not utilizing sodium L-glutamate, sodium Laspartate, L-histidine and L-arginine.
(18) Decarboxylase test on amino acid Negative against L-lysine, L-ornithine and L-arginine.
(19) DNase Negative N-Acyl type of cell wall Acetyl (21) Main diamino acid of cell wall Lysine (22) Mol of guanine plus cytosine of DNA 71.2% These bacteriological properties were compared with those of known microorganisms with reference to Bergey's Manual of Systematic Bacteriology, Vol. 2 (1984). As a result, it was revealed that the microorganism was identified as a novel one of the genus Arthrobacter. Based on the results, the present inventors named this microorganism "Arthrobacter sp. S34". The microorganisms was deposited and accepted on August 6, 1998, under the accession number of FERM BP-6450 in and by the Patent Microorganism Depository, National Institute of Bioscience and Human-Technology Agency of Industrial Science Technology, Ministry of International Trade industry, 1-3, Higashi, 1 chome, Tsukuba-shi, Ibaraki-ken 305-8566, Japan.
54 The homology of DNA between the identified microorganism and type-strains of the genus Arthrobacter, deposited in American Type Culture Collection (ATCC), an international depository of microorganism in USA, was examined in accordance with the DNA-DNA hybridization method in Bergey's Manual of Systematic Bacteriology, Vol.1 (1984). Twelve typestrains shown in Table 1 in the below were respectively cultured in a usual manner, and proliferated cells were collected from the resulting cultures. Arthrobacter sp. S34, FERM BP-6450, was cultured by the seed culture method in the later described Example 2-1, followed by collecting the proliferated cells.
According to conventional method, DNAs were obtained from each type-strain of microorganisms, two micrograms aliquots of the DNAs were digested with a restriction enzyme, Pst I. The resulting digested mixtures were respectively spotted on e a "Hybond-N+", a nylon membrane commercialized by Amersham International, Arlington Heights, IL, USA, and in a usual manner, treated with alkali, neutralized, and dried to fix the DNAs on the nylon membrane. One microgram of the DNA obtained from Arthrobacter sp. S34, FERM BP-6450, was provided and digested with Pst I. Using [a- 32 P] dCTP commercialized by Amersham International, Arlington Heights, IL, USA, and "READY- TO-GO DNA-LABELLING KIT", a DNA-labelling kit commercialized by Pharmacia LKB Biotechnology AB, Uppsala, SWeden, the digestant was labelled with an isotope to obtain a probe. The probe and the above DNA fixed on nylon film were hybridized for two hours 55 under shaking conditions at 65 C in "RAPID HYBRIDIZATION BUFFER", a buffer for hybridization commercialized by Amersham Corp., Div., Amersham International, Arlington Heights, IL, USA.
The nylon film after hybridization was washed in a usual manner, dried and subjected to autoradiography in a usual manner.
Signals of hybridization observed on radiography were analyzed on "IMAGE MASTER", an image analyzing system commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden, followed by expressing numerically the intensity of the signals for hybridization. Based on the numerals, the relative intensities of spots for the DNAs derived from the type-strains were calculated by regarding the signal intensity of a spot for the DNA from Arthrobacter sp. S34, FERM BP-6450, as 100 and used as an index for the DNA homology between the microorganism and the type-strains. The results are in Table 1.
Table 1 a a..
Strain of microorganism Arthrobacter atrocyaneus, ATCC 13752 Arthrobacter aurescens, ATCC 13344 Arthrobacter citreus, ATCC 11624 Arthrobacter crystallpoietes, ATCC 15481 Arthrobacter globiformis, ATCC 8010 Arthrobacter nicotianae, ATCC 15236 Arthrobacter oxydans, ATCC 14358 Arthrobacter pascens, ATCC 13346 Arthrobacter protophormiae, ATCC 19271 Arthrobacter ramosus, ATCC 13727 Arthrobacter ureafaciens, ATCC 7562 Arthrobacter viscous, ATCC 19584 Arthrobacter sp. S34, FERM BP-6450 Signal intensity of hybridization 42.0 12.4 36.2 31.6 55.1 18.8 28.3 24.6 29.3 98.6 42.3 0.0 100 56 As shown in Table 1, the signal intensity of hybridization for the spot of DNA from Arthrobacter ramosus type strain, ATCC 13727, was as high as 98.6%. The data revealed that Arthrobacter sp. S34, FERM BP-6450, had the highest homology with Arthrobacter ramosus type-strain, ATCC 13727, among the 12 type strains used in this Example. The results in the above shows that Arthrobacter sp. S34, FERM BP-6450, is a novel microorganism nearly related to Arthrobacter ramosus typestrain, ATCC 13727.
Example 2 Non-reducing saccharide-forming enzyme Experiment 2-1 Preparation of enzyme A nutrient culture medium, consisting of 1.0 w/v "PINE-DEX a dextrin commercialized by Matsutani Chemical Ind., Tokyo, Japan, 0.5 w/v peptone, O.1 w/v yeast extract, 0.1 w/v monosodium phosphate, 0.06 w/v dipotassium hydrogen phosphate, 0.05 w/v magnesium sulfate, and water, was prepared and adjusted to pH 7.0. About 100 ml aliquots of the medium were placed in 500-ml Erlenmeyer flasks which were then autoclaved at 120 C for 20 min and cooled, followed by an inoculation of a seed of Arthrobacter sp. S34, FERM BP-6450 and a culture at 37 C for 48 hours under stirring conditions of 260 rpm for obtaining a seed culture.
Except for containing 0.05 w/v of "KM-75", a antifoamer commercialized by Shin-Etsu Chemical, Co., Ltd, 57 Tokyo, Japan, an about 20 9 of the same nutrient culture medium as used in the seed culture was placed in a 30-2 fermenter, sterilized, cooled to 37 C, and inoculated with one v/v of the seed culture to the medium, followed by an incubation at 37°C and pHs of 5.5-7.5 for about 72 hours under aeration-agitation conditions.
A portion of the resultant culture was sampled, centrifuged to separate into cells and a culture supernatant.
The cells were ultrasonically disrupted and centrifuged to collect supernatant for a cell extract. Assay for non-reducing saccharide-forming enzyme activity in each culture supernatant and cell extract revealed that the former showed a relativelylow enzyme activity and the latter exhibited an about 0.1 unit with respect to one milliliter of the culture.
Example 2-2 S"Purification of enzyme An about 80 of a culture, obtained according to the I*method in Example 2-1, was centrifuged at 8,000 rpm for 30 min to obtain an about 800 g cells by wet weight. The wet cells were suspended in two liters of 10 M phosphate buffer (pH and treated with "MODEL UH-600", an ultrasonic homogenizer commercialized by SMT Co., Tokyo, Japan. The resulting solution was centrifuged at 10,000 rpm for 30 min to yield an about 2 of a culture supernatant. To and in the culture supernatant was added and dissolved ammonium sulfate to give a saturation degree of 0.7, and the mixture was allowed to stand at 4 C for 24 hours and centrifuged at 10,000 rpm for 30 min to obtain a 58 precipitate. The precipitate thus obtained was dissolved in mM phosphate buffer (pH 7.0) and dialyzed against a fresh preparation of the same buffer as above for 48 hours, followed by centrifuging the dialyzed inner solution at 10,000 rpm for min to remove insoluble substances. An about one liter of the resulting solution was subjected to an ion-exchange column chromatography using a column packed with about 1.3 of "SEPABEADS FP-DA13 GEL", an anion exchanger commercialized by Mitsubishi Chemical Industries Ltd., Tokyo, Japan. The elution step was carried out using a linear gradient buffer of 10 mM C. phosphate buffer (pH 7.0) containing salt which increased from 0 M to 0.6 M. The eluate from the column was fractionated, and the fractions were respectively assayed for non-reducing saccharide-forming enzyme activity. As a result, the enzyme activity was remarkably found in fractions eluted with buffer having a salt concentration of about 0.2 M, followed by pooling the fractions.
Ammonium sulfate was added to the resulting solution to give a concentration of 1 M, and the mixture was allowed to stand at 4°C for 12 hours, centrifuged at 10,000 rpm for 30 min to collect a supernatant. The supernatant thus obtained was subjected to hydrophobic column chromatography using a column packed with "BUTYL TOYOPEARL 650M GEL", a hydrophobic gel commercialized by Tosoh Corporation, Tokyo, Japan. The gel volume used was about 300 ml and used after equilibrated with mM phosphate buffer (pH 7.0) containing 1 M ammonium sulfate.
The elution step was carried out using a linear gradient buffer 59 of 10 mM phosphate buffer (pH 7.0) containing ammonium sulfate which decreased from 1 M to 0 M during the feeding. The eluate from the column was fractionated, and the fractions were respectively assayed for non-reducing saccharide-forming enzyme activity. As a result, the enzyme activity was remarkably found in fractions eluted with buffer having a salt concentration of about 0.75 M, followed by pooling the fractions.
The resulting solution was dialyzed against 10 mM phosphate buffer (pH and the resulting dialyzed inner solution was centrifuged at 10,000 rpm for 30 min to collect a supernatant, followed by subjecting the supernatant to ionexchange column chromatography using a column packed with about 40 ml of "DEAE TOYOPEARL 650S GEL an anion exchanger commercialized by Tosoh Corporation, Tokyo, Japan. The elution step was carried out using a linear aqueous salt solution which increased from 0 M to 0.2 M during the feeding. The eluate from the column was fractionated, and the fractions were respectively assayed for non-reducing saccharide-forming enzyme activity.
As a result, the enzyme activity was remarkably found in fractions eluted with buffer having a salt concentration of about 0.15 M, followed by pooling the fractions. The resulting solution was further subjected to gel filtration column chromatography using a column packed with about 380 ml of "ULTROGEL® AcA44 GEL", a gel for gel filtration column chromatography commercialized by Sepracor/IBF s.a. Villeneuve la Garenne, France, followed by collecting fractions with the desired enzyme activity. The level of the non-reducing 60 saccharide-forming enzyme activity, specific activity, and yields in the above purification steps are in Table 2.
*9 9 *9 *9 C
C.
C. C C C. C
C
CC..
C
C C 61 0 S S S S
S
SS S 5 6.
0 5
SW
S S S S. @5 S S S. 55 *SS *SS C Sq S S S. 5 550 0 S S 0 S S S S S* OS 55 Table 2 Purification step Enzyme activity of non-reducing Specific activity Yield saccharide-forming enzyme (unit/mg protein) (96) Cell extract 8,000 -100 Dialyzed inner-solution after salting out with 7,500 0.2 94 ammonium salt Eluate from SEPABEADS column 5,200 0.7 Eluate from hydrophobic column 2,600 6.3 33 Eluate from TOYO PEARL 910 67.4 11 Eluate of gel filtration 59.0 168 0.7 The solution eluted and collected from the above gel filtration chromatography was in a usual manner subjected to electrophoresis using 7.5 w/v polyacrylamide gel and resulted in a single protein band. The data shows that the eluate from gel filtration chromatography was a purified specimen of a nonreducing saccharide-forming enzyme purified up to an electrophoretically homogeneous form.
Example 2-3 Property of enzyme Example 2-3(a) Action A 20% aqueous solution containing glucose, maltose, maltotriose, maltotetraose, maltopentaose, maltohexaose or maltoheptaose as a substrate for enzyme was prepared, mixed with two units/g substrate, of a purified specimen of a nonreducing saccharide-forming enzyme obtained by the method in Example 2-2, and enzymatically reacted at 50 C and pH 6.0 for c "48 hours. The reaction mixture was desalted and analyzed on high-performance liquid chromatography (abbreviated as "HPLC" hereinafter) using two columns of "MCI GEL CKO4SS COLUMN", commercialized by Mitsubishi Chemical Industries Ltd., Tokyo, Japan, which were cascaded in series, followed by determining the saccharide composition of the reaction mixture. The conditions and apparatus used in HPLC were as follows: The column was kept at 85 C using "CO-8020", a column oven commercialized by Tosoh Corporation, Tokyo, Japan. Water as a moving phase was fed at a flow rate of 0.4 ml/min. The eluate was analyzed on "RI-8020", a differential refractometer 63 commercialized by Tosoh Corporation, Tokyo, Japan. The results were in Table 3.
t.
S
S.
S
S
5S55 S5 S.
*SS.
S.
S. S S S 55
S
SSSS
64 9 9. 9 9 *9 .9 999 9-
S
999 .9 *99 9*9 9 9 99 *9 *99 999 **9 9* 9 99 9 99 9 9 9 9 9 9 9 9 9 99 99 9* Table 3 Substrate Reaction product Elution time Percentage (min) Glucose Glucose 57.2 100.0 Maltose Maltose 50.8 100.0 Maltotriose Glucosyltrehalose 43.2 36.2 Maltotriose 46.2 63.8 Maltotetraose Maltosyltrehalose 38.9 87.2 Maltotetraose 42.3 12.8 Maltopentaose Maltotriosyltrehalose 35.4 93.0 Maltopentaose 38.4 Maltohexaose Maltotetraosyltrehalose 32.7 93.8 Maltohexaose '35.2 6.2 Maltoheptaose Maltopentaosyltrehalose 30.2 94.2 Maltoheptaose 32.4 5.8 As evident form the results in Table 3, each reaction product consisted essentially of the remaining substrate and a newly formed non-reducing saccharide of a-glucosyltrehalose, amaltosyltrehalose, a-maltotriosyltrehalose, amaltotetraosyltrehalose, or a-maltopentaosyltrehalose (in Table 3, it is expressed as glucosyltrehalose, maltosyltrehalose, maltotriosyltrehalose, maltotetraosyltrehalose, or maltopentaosyltrehalose). Substantially no other saccharide was detected in the reaction mixture. Regarding and evaluating the percentage of non-reducing saccharide in each reaction product as a production yield, it was revealed that the yield of aglucosyltrehalose having a glucose polymerization degree of 3 was relatively low and the yield of those having a glucose polymerization degree of 4 or higher such as amaltosyltrehalose, a-maltotriosyltrehalose, amaltotetraosyltrehalose, and a-maltopentaosyltrehalose was as high as about 85% or higher. No formation of non-reducing saccharide from glucose and maltose was observed.
Example 2-3(b) Molecular weight A purified specimen of a non-reducing saccharideforming enzyme, obtained by the method in Example 2-2, was subjected to SDS-PAGE using 10 w/v polyacrylamide gel in a usual manner in parallel with molecular markers commercialized by Japan Bio-Rad Laboratories, Tokyo, Japan. Comparing with the positions of the molecular markers after electrophoresis, the non-reducing saccharide-forming enzyme exhibited a molecular weight of about 75,000±10,000 daltons.
66 Example 2-3(c) Isoelectric point A purified specimen of a non-reducing saccharideforming enzyme, obtained by the method in Example 2-2, was isoelectrophoresed using a polyacrylamide gel containing 2 w/v "AMPHOLINE", an ampholyte, commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden. After isoelectrophoresis, the measurement of the pH of gel revealed that the non-reducing saccharide-forming enzyme had an isoelectric point of about 4.5±0.5.
Example 2-3(d) Optimum temperature and pH Using a purified specimen of a non-reducing saccharide-forming enzyme, obtained by the method in Example 2- 2, it was examined the influence of temperature and pH on the activity of the non-reducing saccharide-forming enzyme. When examining the influence of temperature, it was conducted similarly as in the assay for enzyme activity except for reacting the enzyme at different temperatures. In the examination of the influence of pH, it was conducted similarly as in the assay for enzyme activity except for reacting the enzyme at different pHs using appropriate 20 mM buffers. In each examination, a relative value of a lowered level of reducing power of substrate in each reaction system was calculated into its corresponding relative enzyme activity FIG. 1 shows a result of the influence of temperature, and FIG.
2 is of pH. The cross axles in FIGs. 1 and 2 show reaction temperatures and reaction pHs, respectively. As shown in FIG.
67 1i, the optimum temperature of the enzyme was about 50° C when incubated at pH 6.0 for 60 min. Also as shown in FIG. 2, the optimum pH of the enzyme was a pH of about 6.0 when incubated at 50 C for 60 min.
Example 2-3(e) Thermal and pH stabilities Using a purified specimen of a non-reducing saccharide-forming enzyme, obtained by the method in Example 2- 2, it was examined the thermal and pH stabilities of the enzyme.
The thermal stability was examined by diluting the specimen with 20 mM phosphate buffer (pH incubating the dilutions at prescribed temperatures for 60 min, cooling the incubated dilutions, and determining the remaining enzyme activity in the dilutions according to the method of the assay for the enzyme activity. The pH stability of the enzyme was examined by diluting the specimen with 50 mM buffers with appropriate 0* different pHs, incubating the dilutions at 4 C for 24 hours, .adjusting the dilutions to pH 6, and determining the remaining enzyme activity in the dilutions according to the method of the assay for the enzyme activity. The results of the thermal and pH stabilities of the enzyme are respectively shown in FIGs. 3 and 4. The cross axles in FIGs. 3 and 4 show incubation temperatures and pHs for the enzyme, respectively. As shown in FIG. 3, the enzyme was stable up to about 55 C and was stable at pHs in the range of about 5.0 to about 10.0 as shown in FIG.
4.
These results evidence that the non-reducing saccharide forming-enzyme, obtained by the method in Example 2- 68 2, is the present non-reducing saccharide-forming enzyme having an optimum temperature in a medium temperature range.
Example 2-4 Partial amino acid sequence A portion of a purified specimen of a non-reducing saccharide-forming enzyme, obtained by the method in Example 2- 2, was dialyzed against distilled water to obtain an about pg of a sample by weight as a protein for analyzing the Nterminal amino acid sequence. Using "PROTEIN SEQUENCER MODEL 473A", a protein sequencer commercialized by Applied Biosystems, Inc., Foster City, USA, the N-terminal amino acid sequence was analyzed up to 20 amino acid residues from the N-terminus. The revealed N-terminal amino acid sequence was the partial amino acid sequence of SEQ ID NO:4. A portion of a purified specimen of a non-reducing saccharide-forming enzyme, obtained by the method in Example 2-2, was dialyzed against 10 mM Tris-HCl buffer (pH 9.0) and in a usual manner concentrated up to an about one mg/ml solution using "ULTRACENT-30", an ultrafiltration membrane commercialized by Tosoh Corporation, Tokyo, Japan. To 0.2 ml of the concentrate was added 10 pg "TPCK-TRYPSIN", a reagent trypsin commercialized by Wako Pure Chemical Industries, Ltd., Tokyo, Japan, allowed to react at C for 22 hours to digest the enzyme to form peptides. The peptides were separated by subjecting the reaction mixture to reverse-phase HPLC using "p BONDASPHERE C18 COLUMN" having a diameter of 3.9 mm and a length of 150 mm, a product of Waters Chromatography Div., MILLIPORE Corp., Milford, USA. The elution step was carried out at ambient temperature by feeding to the 69 column an aqueous solution containing 0.1 v/v trifluoro acetate and acetonitrile increasing from 24 to 48 v/v for min during the feeding at a flow rate of 0.9 ml/min. The peptides eluted from the column were .detected by monitoring the absorbance at a wavelength of 210 nm. Two peptides, which were well separated from others, "S5" eluted at a retention time of about two hours and "S8" eluted at a retention time of about 30 min were separated, respectively dried in vacuo, and dissolved in 50 v/v aqueous acetonitrile solutions containing ul of 0.1 v/v trifluoro acetate. The peptide solutions were subjected to the protein sequencer to analyze up to amino acid residues. From peptides "S5" and "S8" the amino acid sequences of SEQ ID NOs:5 and 6 were obtained.
Example 3 DNA encoding non-reducing saccharide-forming enzyme Example 3-1 Construction and screening of gene library 4.
Except for setting temperature and time for culture were respectively set to 27 C and 24 hours, Arthrobacter sp.
S34, FERM BP-6450, was cultured similarly as in Example 2-1.
The culture was centrifuged to remove cells which were then suspended in an adequate amount of Tris-EDTA-salt bufferred saline (hereinafter designated as "TES buffer") (pH admixed with lysozyme in an amount of 0.05 w/v to the cell suspension by volume, followed by an incubation at 37 C for min. The resultant mixture was freezed by standing at -80 C for one hour, and then admixed and sufficiently stirred with a mixture of TES buffer and phenol preheated to 60°C, cooled, and 70 centrifuged to collect the formed supernatant. To the supernatant was added cold ethanol was added, and then the formed sediment was collected, dissolved in an adequate amount of SSC buffer (pH admixed with 7.5 pg ribonuclease and 125 pg protease, and incubated at 37 C for one hour. The resulting mixture was admixed and stirred with chloroform/isoamyl alcohol, and allowed to stand, followed by collecting the formed upper layer, adding cold ethanol to the layer, and collecting the formed sediment. The sediment was rinsed with a cold 70 v/v ethanol, dried in vacuo to obtain a DNA, followed by dissolving S: in SSC buffer (pH 7.1) to give a concentration of about one S* mg/ml, and freezing at -80 C.
Fifty microliters of the DNA was provided, admixed with an abut 50 units of KpnI as an restriction enzyme, and incubated at 37 C for one hour to digest the DNA. Three micrograms of the digested DNA and 0.3 microgram of "pBluescript II SK a plasmid vector commercialized by Stratagene Cloning Systems, California, USA, was weighed, subjected to the action were ligated using "DNA LIGATION KIT", commercialized by Takara Shuzo Co., Ltd., Tokyo, Japan, according to the protocol affixed to the kit. According to conventional competent cell method, 100 pi of "Epicurian Coli XL1-Blue", an Escherichia coli strain commercialized by Stratagene Cloning Systems, California, USA, was transformed with the ligated product. Thus a gene library was obtained.
The gene library thus obtained was inoculated to a agar nutrient plate medium (pH 7.0) containing 10 g/9 tryptone, g/9 yeast extract, 5 g/9 sodium chloride, 75 mg ampicillin 71 sodium salt, and 50 mg/e 5-bromo-4-chloro-indolyl-P-galactoside, and incubated at 37°C for 18 hours. About 5,000 white colonies formed on the medium were in a usual manner fixed on "HYBOND-Na nylon film commercialized Amersham Corp., Div. Amersham International, Arlington Heights, IL, USA. Based on 1-8 amino acid residues in the amino acid sequence of SEQ ID NO:5 revealed in Example 2-4, an oligonucleotide having the nucleotide sequence of SEQ ID NO:18 was chemically synthesized, and in a usual manner labelled with [y- 32 p] ATP and T4 polynucleotide kinase to obtain a probe. Using the probe, the colonies, which had been fixed on the nylon film and obtained previously, were screened by conventional colony hybridization method. The hybridization was carried out at 65 C for 16 hours in a solution for hybridization containing 6 x SSC, 5 x Denhalt solution, and 100 mg/£ of denatured salmon sperm DNA. The above nylon film after the hybridization was washed with 6 x SSC at 65 C for min, and further washed with 2 x SSC containing 0.1 w/v SDS o at 65 C for two hours. The resulting nylon film was in a usual manner subjected to autoradiography, and then, based on the signals observed on the autoradiography, a colony which strongly hybridized with the probe was selected and named "GY1" as a transformant.
Example 3-2 Decoding of nucleotide sequence According to conventional manner, the transformant GY1 was inoculated to L-broth (pH 7.0) containing 100 pg/ml ampicillin in a sodium form, and cultured at 37 C for 24 hours under shaking conditions. After completion of the culture, the 72 proliferated cells were collected from the culture by centrifugation and treated with conventional alkali-SDS method to extract a recombinant DNA. The recombinant DNA was named pGY1. Using the above probe, the recombinant DNA, pGY1, was analyzed on conventional Southern blot technique, and based on the analytical data a restriction map was constructed as shown in FIG. 5. As shown in FIG. 5, it was revealed that the recombinant DNA, pGY1, contained a nucleotide sequence consisting of bases of about 5,500 base-pairs (bp) from Arthrobacter sp. S34, FERM BP-6450, expressed with a bold line, 'and that the recombinant DNA contained a nucleotide sequence 0° encoding the present non-reducing saccharide-forming enzyme, as indicated with a black arrow within the area of the bold line, in the area consisting bases of about 4,000 bp between two recognition sites by a restriction enzyme, EcoRI. Based on the e. result, the recombinant DNA, pGY1, was completely digested with EcoRI, and then a DNA fragment of about 4,000 bp was separated and purified using conventional agarose gel electrophoresis.
The DNA fragment and "pBluescript II SK a plasmid vector commercialized by Stratagene Cloning Systems, California, USA, which had been previously digested with EcoRI, were ligated with conventional ligation method. With the ligated product, "XL1- BLUE", an Escherichia coli strain commercialized by Stratagene Cloning Systems, California, USA, was transformed to obtain a transformant. A recombinant DNA was extracted from the transformant in a usual manner, confirming in a usual manner that it contained the aforesaid DNA fragment consisting of about 73 bases of 4,000 bp, and named it "pGY2". The transformant introduced with "pGY2" was named "GY2".
The analysis of the nucleotide sequence of the recombinant DNA pGY2 on conventional dideoxy method revealed that it contained the nucleotide sequence of SEQ ID NO:19 consisting bases of 3252 bp derived from Arthrobacter sp. S34, FERM BP-6450. The nucleotide sequence encodes the amino acid sequence as shown in parallel in SEQ ID NO:19. Comparing the amino acid sequences of SEQ D NOs:4 to 6 as partial amino acid sequences of the present non-reducing saccharide-forming enzyme confirmed in Example 2-4, the amino acid sequences of SEQ ID Oo NOs:4 to 6 were perfectly coincided with the amino acids 2-21, 619-638, and 98-117 in SEQ ID NO:19. These data indicate that the present non-reducing saccharide-forming enzyme obtained in Example 2 consists of the amino acids 2-757 of SEQ ID NO:19, or has the amino acid SEQUence of SEQ ID NO:1, and that the enzyme of Arthrobacter sp. S34, FERM BP-6450, is encoded by a nucleotide sequence of bases 746-3013 of SEQ ID NO:19, or too.
encoded by the nucleotide sequence of SEQ ID NO:7. The structure of the recombinant DNA pGY2 is in FIG. 6.
The above-identified amino acid sequence of the present non-reducing saccharide-forming enzyme obtained by the method in Example 2, and amino acid sequences of known enzymes having a non-reducing saccharide-forming activity were compared using "GENETYX-MAC, VER. a commercially available computer program commercialized by Software Development Co., Ltd., Tokyo, Japan, according to the method by Lipman, David J. in Science, Vol. 227, pp. 1,435-1,441 (1985) to calculate their homology 74 The enzymes used as known enzymes were those from Arthrobacter sp. Q36 and Rhizobium sp. M-ll disclosed in Japanese Patent Kokai No. 322,883/95; Sulfolobus acidocaldarius, ATCC 33909, disclosed in Japanese Patent Kokai No. 84,586/96; and Sulfolobus solfataricus KM1 disclosed in Sai-Kohyo No. WO 95/34642. As disclosed in the above publications, the conventional enzymes have optimum temperatures other than a medium temperature range. The information of amino acid sequences of conventional enzymes is obtainable from the GeneBank, a DNA database produced by the National Institutes of a. "Health (NIH), USA, under the accession numbers of D63343, o D64128, D78001 and D83245. The obtained homologies are in Table 4.
Table 4 SOrigin of enzyme for amino acid Homology on amino acid sequence(*) comparison sequence Rhizobium sp. M-1l (D78001) 56.9% Arthrobacter sp. Q36 (D63343) 56.6% Sulfolobus solfataricus KM1 (D64128) 33.2% a Sulfolobus acidocaldarius, 31.4% ATCC 33909 (D83245) Numerals in parentheses are access numbers to the GeneBank.
As shown in Table 4, the present non-reducing saccharide-forming enzyme in Example 2 showed a highest amino acid homology of 56.9% with the enzyme from Rhizobium sp. M-1l among conventional enzymes with optimum temperatures out of a 75 medium temperature range. The data indicates that the present non-reducing saccharide-forming enzyme generally comprises an amino acid sequence with a homology of at least 57% with the amino acid sequence of SEQ ID NO:1. The comparison result on amino acid sequence revealed that the enzyme in Example 2 and the above-identified four types of conventional enzymes have common amino acid sequences of SEQ ID NOs:2 and 3. The enzyme in Example 2 has partial amino acid sequences of SEQ ID NOs:2 and 3 as they correspond to amino acids 84-89 and 277-282 in SEQ ID NO:1. The four types of enzymes used as references have the above partial amino acid sequences which are positioned at their corresponding parts. Based on the fact that any of the present enzyme in Example 2 and the enzymes as references have a common activity of forming non-reducing saccharides having a trehalose •structure as an end unit from reducing partial starch hydrolysates, it was indicated that the partial amino acid sequences of SEQ ID NOs:2 and 3 correlated to the expression of such an enzyme activity. These results show that the present non-reducing saccharide-forming enzyme can be characterized in that it comprises the amino acid sequences of SEQ ID NOs:2 and 3, and has an optimum temperature in a medium temperature range.
Example 3-3 Transformant introduced with DNA Based on the and 3'-termini of the nucleotide sequence of SEQ ID NO:7, an oligonucleotide of the nucleotide sequences of SEQ ID NOs:20 and 21 were chemically synthesized in a usual manner. As sense- and anti-sense-primers, 85 ng of each of the oligonucleotide and 100 ng of the recombinant DNA 76 pGY2 in Example 3-2 as a template were mixed in a reaction tube, and the mixture was admixed with 1.25 units of "PYROBEST", a thermostable DNA polymerase specimen commercialized by Takara Shuzo Co., Ltd., Tokyo, Japan, together with 5 pl of a buffer affixed with the specimen and 4 pl of a dNTP mixture. The resulting mixture was brought up to a volume of 50 pl with sterilized distilled water to effect PCR. The temperature for PCR was controlled in such a manner that the mixture was treated with 25 cycles of successive incubations of 95 C for one minute, 98 C for 20 seconds, 70 C for 30 seconds, and 72 C for four S 9 minutes, and finally incubated at 72 C for 10 min. A DNA as a PCR product was collected in a usual manner to obtain an about 2,300 bp DNA. The DNA thus obtained was admixed with "pKK223a plasmid vector commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden, which had been previously cleaved with a restriction enzyme, EcoRI, and blunted by "DNA BLUNTING KIT" commercialized by Takara Shuzo Co., Ltd., Tokyo, Japan, and ligated by conventional ligation method. Thereafter, the ligated product was treated in a usual manner to obtain a recombinant DNA introduced with the above DNA consisting of bases of about 2,300 bp. Decoding of the recombinant DNA showed that it comprised a nucleotide sequence which two nucleotide sequences of 5'-ATG-3' and 5'-TGA-3' were respectively added to the and 3'-termini of the nucleotide sequence of SEQ ID NO:7. The DNA was named "pGY3". The structure of the recombinant DNA pGY3 was in FIG. 7.
The recombinant DNA pGY3 was in a usual manner introduced into an Escherichia coll LE 392 strain, ATCC 33572, 77 which had been competented in conventional manner, to obtain a transformant. Conventional alkali-SDS method was applied for the transformant to extract a DNA, and then the extracted DNA was confirmed to be pGY3 in a usual manner and named "GY3".
Thus a transformant introduced with a DNA encoding the present non-reducing saccharide-forming enzyme.
Example 3-4 Transformant introduced with DNA Based on a nucleotide sequence in the downstream of the 3'-terminus of a promotor in "pKK223-3", a plasmid vector commercialized by Pharmacia LKB Biotechnology AB, Uppsala, to Sweden, oligonucleotide having the nucleotide sequences of SEQ ID NOs:22 and 23 were synthesized in conventional manner, and phosphorylated their 5'-termini using T4 polynucleotide kinase.
The phosphorylated oligonucleotide were annealed, ligated with *9 "pKK223-3", a plasmid vector commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden, which had been previously cleaved with restriction enzymes of EcoRI and PstI, by conventional ligation method. According to conventional method, S* the ligated product was introduced into an Escherichia colil strain which was then cultured and treated with alkali-SDS method to extract a DNA. The DNA thus obtained had a similar structure to a plasmid vector "pKK223-3", and had recognition sites by restriction enzymes of EcoRI, XbaI, Spel, and PstI at the downstream of the promotor. The present inventors named the DNA a plasmid vector "pKK 4 Similarly as in Example 3-3, PCR was done except for using oligonucleotide with the nucleotide sequences of SEQ ID 78 NOs:24 and 25, which had been chemically synthesized based on the and 3'-terminal partial nucleotide sequences of SEQ ID NO:7. A DNA as a PCR product was collected in a usual manner to obtain an about 2,300 bp DNA. The DNA thus obtained was cleaved with restriction enzymes, XbaI and Spel, and the above plasmid vector pKK4, which had been cleaved with XbaI and Spel, were ligated by conventional ligation method. Thereafter, the ligated product was treated in a usual manner to obtain a recombinant DNA with the nucleotide sequence of SEQ ID NO:7.
The recombinant DNA was named "pKGY1".
Using overlap extension method, which two steps PCR were applied for and reported by Horthon, Robert M. in Methods in Enzymology, Vol. 217, pp. 270-279 (1993), a nucleotide sequence in the upper part of the 5'-terminus of SEQ ID NO:7 in the above DNA pKGYl was modified. PCR as a first step PCR-A was done similarly as in Example 3-3 except for using, as sense- and anti-sense-primers, oligonucleotide of the nucleotide sequences of SEQ ID NOs:26 and 27, which had been chemically synthesized based on the nucleotide sequence of plasmid vector pKK4; and as a template the above recombinant DNA pKGY1. In parallel, PCR as a first step PCR-B was done similarly as in Example 3-3 except for using, as sense- and anti-sense-primers, oligonucleotide of the nucleotide sequences of SEQ ID NOs:28 and 29, which had been respectively chemically synthesized in a usual manner based on the nucleotide sequence of SEQ ID NO:7; and as a template the above recombinant DNA pKGY1. A DNA as a product of the first step PCR-A was collected in a usual manner to obtain an about 390 bp DNA. A DNA as a product in the first 79 stp PCR-B was collected in conventional manner to obtain an about 930 bp DNA.
PCR, as a second step PCR-A, was done similarly as in Example 3-3 except for using as a template a DNA mixture, a product of the first PCR-A and the first step PCR-B; as a sense primer the oligonucleotide sequence of the nucleotide sequence of SEQ ID NO:26; and as an anti-sense primer the oligonucleotide of the nucleotide sequence of SEQ ID which had been chemically synthesized in conventional manner based on the nucleotide sequence of SEQ ID NO:7. The DNA as a product in the PCR was collected in a usual manner to obtain an about 1,300 bp DNA.
The DNA as a product in the second PCR-A was cleaved with restriction enzymes of EcoRI and BsiWI, and the formed DNA consisting of bases of about 650 bp was collected in a usual manner. An about 6,300 bp DNA, which was formed after cleavage of the above recombinant DNA pKGY1 with restriction enzymes of EcoRI and BsiWI, was collected in conventional manner. These DNAs were ligated in a usual manner, and the ligated product was treated in conventional manner to obtain a recombinant DNA comprising an about 650 bp DNA derived from the second step PCR- A. Decoding of the DNA by conventional dideoxy method revealed that the obtained recombinant DNA comprised a nucleotide sequence which the nucleotide sequence of SEQ ID NO:8, a nucleotide sequence represented by 5'-ATG-3', and a nucleotide sequence represented by 5'-TGA-3' were cascaded in the order as indicated above from the 5'-terminus to the 3'-terminus. The recombinant DNA thus obtained was named "pGY4". The structure 80 of pGY4 is substantially the same as the recombinant DNA pGY3 except for that pGY4 comprises the nucleotide sequence of SEQ ID NO:8.
The recombinant DNA pGY4 was introduced in conventional manner with "BMH71-18mutS", an Escherichia coli competent cell commercialized by Takara Shuzo Co., Ltd., Tokyo, Japan to obtain a transformant. The transformant was treated with alkali-SDS method to extract a DNA which was then identified with pGY4 in conventional manner. Thus a transformant introduced with a DNA encoding the present nonreducing saccharide-forming enzyme.
SExample 4 Preparation of non-reducing non-reducing saccharide-forming enzyme Example 4-1 Preparation of enzyme using microorganism of the genus Arthrobacter In accordance with the method in Example 2-1, Arthrobacter sp. S34, FERM BP-6450, was cultured by a fermenter for. about 72 hours. After the cultivation, the resulting culture was concentrated with an SF-membrane to yield an about eight liters of a cell suspension. The cell suspension was treated with "MINI-LABO", a supper high-pressure cell disrupter commercialized by Dainippon Pharmaceutical Co., Ltd., Tokyo, to disrupt the cells. The resulting solution was centrifuged to obtain an about 8.5 9 of a supernatant. When measured for nonreducing saccharide-forming activity in the supernatant, it showed an about 0.1 unit of the enzyme activity with respect to 81 one milliliter of the culture. Ammonium sulfate was added to the supernatant to brought up to a saturation degree of about 0.7 to salt out, and the sediment was collected by centrifugation, dissolved in 10 mM phosphate buffer (pH and dialyzed against a fresh preparation of the same buffer.
Except for using an about 2 of an ion-exchange resin, the resulting dialyzed inner solution was fed to ion-exchange column chromatography using "SEPABEADS FP-DA13 GEL", an anion exchanger commercialized by Mitsubishi Chemical Industries Ltd., Tokyo, Japan, as described in Example 2-2, to collect fractions with non-reducing saccharide-forming enzyme. The fractions were pooled, dialyzed against a fresh preparation of the same buffer t but containing 1 M ammonium sulfate, and the resulting dialyzed inner solution was centrifuged to collect the formed supernatant. Except for using an about 300 ml gel, the supernatant was fed to hydrophobic column chromatography in accordance with the method described in Example 2-2 to collect fractions with non-reducing saccharide-forming enzyme. Then it was confirmed that the obtained enzyme had an optimum temperature over 40 0 C but below 60 C, a temperature in a medium temperature range, and an acid pH range of less than 7.
Thus an about 2,600 units of the present non-reducing saccharide-forming enzyme was obtained.
Example 4-2 Preparation of enzyme using transformant One hundred ml of an aqueous solution containing 16 g/9 polypeptone, 10 g/e yeast extract, and 5 sodium chloride was placed in a 500-ml Erlenmeyer flask, autoclaved at 121 C for 82 min, cooled, adjusted aseptically to pH 7.0, and admixed aseptically with 10 mg of ampicillin in a sodium salt to obtain a liquid nutrient medium. The nutrient medium was inoculated with the transformant GY2 in Example 3-2, and incubated at 37°C for about 20 hours under aeration-agitation conditions to obtain a seed culture. Seven liters of a medium having the same composition as used in the seed culture was prepared as in the case of the seed culture and placed in a 10-£ fermenter, and inoculated with 70 ml of the seed culture, followed by the incubation for about 20 hours under aeration-agitation conditions. From the resultant culture cells were collected by centrifugation in a usual manner. The collected cells were suspended in phosphate buffer (pH disrupted by the treatment of ultrasonication, and centrifuged to remove insoluble substances, followed by collecting a supernatant to obtain a cell extract. The extract was dialyzed against 10 mM phosphate buffer (pH The resulting dialyzed inner solution was collected and confirmed that it exhibited a nonreducing saccharide-forming enzyme activity, had an optimum temperature in a medium temperature range, a temperature of over 40°C but below 60 C, and had an optimum pH in an acid pH range, a pH of less than 7.
Thus the present non-reducing saccharide-forming enzyme was obtained. In the culture of this example, an about 0.2 unit/ml culture of the enzyme was produced.
As a control, "XL1-BLUE", an Escherichia coli strain commercialized by Stratagene Cloning Systems, California, USA, was cultured under the same conditions as above in a nutrient 83 culture medium of the same composition as used in the above except that it contained no ampicillin. Similarly as above, a cell extract was obtained and dialyzed. No activity of nonreducing saccharide-forming enzyme was detected in the resulting dialyzed inner solution, meaning that the transformant GY2 is useful in producing the present non-reducing saccharide-forming enzyme.
Example 4-3 Preparation of enzyme using transformant The transformant GY3 in Example 3-3 was cultured similarly as in Example 4-2 except for using a liquid nutrient culture medium consisting of one w/v maltose, three w/v polypeptone, one w/v "MEAST PIG", a product of Asahi Breweries, Ltd., Tokyo, Japan, 0.1 w/v dipotassium hydrogen phosphate, 100 pg/ml ampicillin, and water. The resultant 9 culture was treated with ultrasonication to disrupt cells, and the resulting mixture was centrifuged to remove insoluble substances. When assayed for non-reducing saccharide-forming enzyme activity in the resulting supernatant, the culture i contained about 15 units/ml culture of the enzyme. In accordance with the method in Example 2-2, the enzyme in the supernatant was purified, confirming that the resulting purified specimen exhibited a non-reducing saccharide-forming enzyme activity, had an optimum temperature in a medium temperature range, a temperature of over 40°C but below 60°C, and had an optimum pH in an acid pH range, a pH of less than 7.
Thus the present non-reducing saccharide-forming enzyme was obtained.
84 Example 4-4 Preparation of enzyme using transformant The transformant GY4 in Example 3-4 was cultured similarly as in Example 4-2 except for using a liquid nutrient culture medium consisting of two w/v maltose, four w/v peptone, one w/v yeast extract, 0.1 w/v sodium dihydrogen phosphate, 200 pg/ml ampicillin, and water. The resultant culture was treated with ultrasonication to disrupt cells, and the resulting mixture was centrifuged to remove insoluble substances. When assayed for non-reducing saccharide-forming enzyme activity in the resulting supernatant, the culture contained about 60 units/ml culture of the enzyme. In accordance with the method in Example 2-2, the enzyme in the supernatant was purified, confirming that the resulting purified specimen exhibited a non-reducing saccharide-forming enzyme activity, had an optimum temperature in a medium temperature range, a temperature of over 40 C but below 60 C, and had
S
an optimum pH in an acid pH range, a pH of less than 7.
Thus the present non-reducing saccharide-forming enzyme was obtained.
Example Trehalose-releasing enzyme Example 5-1 Production of enzyme According to the method in EXample 2-1, Arthrobacter sp. S34, FERM BP-6450, was cultured by a fermenter. Then, in accordance with the method in Example 2-2, the resulting culture was sampled, followed by separating the sample into cells and 85 a supernatant. From the cells a cell extract was obtained.
When assayed for trehalose-releasing activity of the supernatant and the cell extract, the former scarcely exhibited the enzyme activity, while the latter exhibited an about 0.3 uni/ml culture of the enzyme.
Example 5-2 Preparation of enzyme An about 80 of a culture, prepared according to the method in Example 2-1, was centrifuged at 8,000 rpm for 30 min to obtain an about 800 g cells by wet weight. Two of the wet cells was suspended in 10 mM phosphate buffer (pH 7.0) and treated with "MODEL UH-600", an ultrasonic homogenizer *9*9 commercialized by MST Co., Tokyo, Japan. The resulting suspension was centrifuged at 10,000 rpm for 30 min, followed •a collection of an about two liters of a supernatant. The supernatant was admixed with ammonium sulfate to bring to a saturation degree of 0.7, allowed to stand at 4°C for 24 hours, and centrifuged at 10,000 rpm for 30 min to obtain a precipitate salted out with ammonium sulfate. The precipitate was dissolved in 10 mM phosphate buffer (pH dialyzed against a fresh preparation of the same buffer for 48 hours, and centrifuged at 10,000 rpm for 30 min to remove insoluble substances. An about one liter of the resulting dialyzed inner solution was fed to ion-exchange column chromatography using an about 1.3 of "SEPABEADS FP-DA13 GEL", an anion exchanger commercialized by Mitsubishi Chemical Industries Ltd., Tokyo, Japan. The elution step was carried out using a linear 10 mM phosphate buffer (pH containing salt decreasing from 0 M to 0.6 M during the 86 feeding. The eluate from the column was fractionated, and the fractions each were assayed for trehalose-releasing enzyme activity. As a result, the enzyme activity was remarkably found in fractions eluted with buffer having a salt concentration of about 0.2 M, followed by pooling the fractions.
Ammonium sulfate was added to the pooled solution to bring to a concentration of 1 M, and the mixture was allowed to stand at 4 C for 12 hours, centrifuged at 10,000 rpm for 30 min to collect a supernatant. The supernatant was subjected to hydrophobic column chromatography using a column packed with "BUTYL TOYOPEARL 650M GEL", a hydrophobic gel commercialized by Tosoh Corporation, Tokyo, Japan. Prior to use, the gel volume was set to about 300 ml and equilibrated with 10 mM phosphate buffer (pH 7.0) containing 1 M ammonium sulfate. The elution step was carried out using a linear gradient aqueous solution of ammonium decreasing from 1 M to 0 M during the feeding. The eluate from the column was fractionated, and the fractions were respectively assayed for trehalose-releasing enzyme activity.
As a result, the enzyme activity was remarkably found in fractions eluted with buffer having an ammonium concentration of about 0.5 M, followed by pooling the fractions.
The fractions were pooled, dialyzed against 10 mM phosphate buffer (pH and the dialyzed inner solution was centrifuged at 10,000 rpm for 30 min. Then the resulting supernatant was collected and subjected to "DEAE-TOYOPEARL 650S GEL", an anion exchanger commercialized by Tosoh Corporation, Tokyo, Japan. The elution step was carried out using a linear gradient aqueous solution of salt increasing from 0 M to 0.2 M 87 during the feeding. The eluate from the column was fractionated, and the fractions were respectively assayed for trehalose-releasing enzyme activity. As a result, the enzyme activity was remarkably found in fractions eluted with buffer having an ammonium concentration of about 0.15 M, followed by pooling the fractions. The pooled solution was subjected to gel filtration chromatography using about 380 ml of "ULTROGEL® AcA44 RESIN", a gel for gel filtration column chromatography commercialized by Sepracor/IBF s.a. Villeneuve la Garenne, France, followed collecting fractions with a remarkable activity of the enzyme. The content, specific activity, and yield of the enzyme in each step are in Table a 88 9* 9*
S
S
S
*5 S S S S S *5
S
*5 *S *SS *S* S. S S. C C S S S S S S S S S 55 Table Step Activity of Trehalose-releasing Specific activity Yield enzyme (unit) (mg/ protein) Cell extract 24,000 -100 Dialyzed inner solution after salting out with 22, 500 0.6 94 ammonium'sulfate.
Eluate from SEPABEADS column 15,600 2.0 Eluate from hydrophobic column 6,400 25.3 27 Eluate from TOYOPEARL column 4,000 131 17 Eluate after gel filtration 246 713 When electrophoresed in 7.5 w/v polyacrylamide gel in conventional manner, the solution eluted and collected from the above gel filtration chromatography gave a single protein band. The data indicates that the eluate from gel filtration chromatography obtained in the above was a purified trehalosereleasing enzyme purified up to an electrophoretically homogeneous level.
Example 5-3 Property of enzyme Example 5-3(a) 9 Action Any one of saccharides consisting of aglucosyltrehalose, a-maltosyltrehalose, a-maltotriosyltrehalose, a-maltotetraosyltrehalose, and a-maltopentaosyltrehalose as nonreducing saccharides having a trehalose structure obtained by 9* the method in the later described Example 8-3; and maltotriose, maltotetraose, maltopentaose, maltohexaose, and maltoheptaose as reducing saccharides was dissolved in water into a 2 w/v solution as an aqueous substrate solution for substrate. Each aqueous substrate solution was admixed with two units/g substrate, of a purified specimen of trehalose-releasing enzyme obtained by the method in Example 5-2, and enzymatically reacted at 50 C and pH 6.0 for 48 hours. In accordance with the method in Example the reaction product was analyzed on HPLC after desalting to calculate the saccharide composition of the reaction products each. The results are in Table 6. In Table 6, a-glucosyltrehalose, a-maltosyltrehalose, amaltotriosyltrehalose, a-maltotetraosyltrehalose, and a- 90 maltopentaosyltrehalose were respectively expressed as glucosyltrehalose, maltosyltrehalose, maltotriosyltrehalose, maltotetraosyltrehalose, arid maltopentaosyltrehalose.
9* 0*
S
.5 S9**
S
SS
S. S
SS
S.
SS
S. S 555.
S S 91 0 cc p c Ge cc cc cc. 0 0 cG4 ccc cc cc c C cc e.c 0. e. a Table 6 Substrate Reaction product Elution time Composition (min) Glucosyltrehalose Trehalose 48.5 16.8 Glucose 57.2 8.2 Glucosyltrehalose 43.3 75.0 Maltosyltrehalose Trehalose 48.5 44.1 Maltose 50.8 44.4 Maltosyltrehalose 38.9 11.5 Maltotriosyltrehalose Trehalose 48.5 40.5 Maltotriose 46.2 59.0 Maltotriosyltrehalose 35.4 Maltotetraosyltrehalose Trehalose 48.5 35.0 Maltotetraose 42.1 64.2 Maltotetraosyltrehalose 32.7 0.3 Maltopentaosyltrehalose Trehalose 48.5 29.5 Maltopentaose 38.2 70.2 Maltopentaosyltrehalose 30.2 0.3 Maltotriose Maltotriose 46.2 100.0 Maltotetraose Maltotetraose 42.1 100.0 Maltopentaose Maltopentaose 38.2 100.0 Maltohexaose Maltohexaose 35.2 100.0 Maltoheptaose Maltoheptaose 32.6 100.0 As evident from the results in Table 6, the trehalosereleasing enzyme, obtained by the method in Example 5-2, specifically hydrolyzed non-reducing a saccharide, which has a trehalose structure as an end unit and a glucose polymerization degree of at least three, at a site between a part of the trehalose structure and a part of the resting to form trehalose and a reducing saccharide having a glucose polymerization degree of one or more. While the enzyme did not act on maltooligosaccharides such as maltotriose and lower saccharides.
Example 5-3(b) Molecular weight A purified specimen of a trehalose-releasing enzyme, obtained by the method in Example 5-2, was subjected along with molecular markers commercialized by Japan Bio-Rad Laboratories, Tokyo, Japan, to conventional SDS-PAGE using 10 w/v polyacrylamide gel. After electrophoresis, the position of the specimen electrophoresed on the gel was compared with those of the markers, revealing that the specimen had a molecular weight of about 62,000±5,000 daltons.
Example 5-3(c) Isoelectric point A purified specimen of a trehalose-releasing enzyme, obtained by the method in Example 5-2, was in a usual manner subjected to isoelectrophoresis using a polyacrylamide gel containing 2 w/v "AMPHOLINE", an ampholyte commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden. Measurement of pH of the gel after electrophoresis, it had an isoelectric point of about 4.7±0.5.
93 Example 5-3(d) Optimum temperature and pH A purified specimen of a trehalose-releasing enzyme, obtained by the method in Example 5-2, was examined on the influence of the temperature and pH on the enzyme activity. The influence of temperature was examined according to the assay for enzyme activity except for reacting the enzyme at different temperatures. The influence of pH was examined according to the assay for enzyme activity except for reacting the enzyme at different pHs using appropriate 20 mM buffers. In each procedure, relative values of the increased level of reducing power found in each system were calculated and regarded as relative enzyme activity The results of the influence of temperature and pH are respectively in FIGs. 8 and 9. The cross axles in FIGs. 8 and 9 show reaction temperatures and pHs for the enzyme, respectively. As shown in FIG. 8, the optimum temperature of the enzyme was about 50 to about 55 C when incubated at pH 6.0 for 30 min, while the optimum pH of the enzyme was a pH of about 6.0 when incubated at 50 C for 30 min.
Example 5-3(e) Stability on temperature and pH A purified specimen of a trehalose-releasing enzyme, obtained by the method in Example 5-2, was examined on the stability of temperature and pH. The stability of temperature was examined by diluting the specimen with 20 mM phosphate buffer (pH incubating the dilutions at different temperatures for 60 min, cooling the resulting dilutions, and assaying the enzyme activity remained in the dilutions. The pH 94 stability was studied by diluting the specimen with 50 mM buffers (pH 7.0) with different pHs, incubating the dilutions at 4 C for 24 hours, adjusted to pH 6, and assaying the enzyme activity remained in the dilutions. The results of the stability of temperature and pH are respectively in FIGs. 10 and 11. The cross axles in FIGs. 10 and 11 show temperatures and pHs at which the enzyme was kept, respectively. As shown in FIG. 10, the enzyme was stable up to about 50 C, while the enzyme was stable at pHs in the range of about 4.5 to about 10.0.
The results described hereinbefore indicate that the trehalose-releasing enzyme, obtained by the method in Example 5-2, is the present enzyme which has an optimum temperature in a medium temperature range.
Example 5-4 Partial amino acid sequence A portion of a purified specimen of a trehalosereleasing enzyme, obtained by the method in Example 5-2, was dialyzed against distilled water and prepared into a sample containing about 80 ng protein for the N-terminal amino acid analysis. Using "PROTEIN SEQUENCER MODEL 473A", a protein sequencer commercialized by Applied Biosystems, Inc., Foster City, USA, the N-terminal amino acid sequence was analyzed up to 20 amino acid residues from the N-terminus. The revealed Nterminal amino acid sequence was the partial amino acid sequence of SEQ ID NO:14.
A portion of a purified specimen of a trehalosereleasing enzyme, obtained by the method in Example 5-2, was 95 dialyzed against 10 mM Tris-HCl buffer (pH 9.0) and in a usual manner concentrated to give a concentration of about one milligram per milliliter using "ULTRACENT-30", an ultrafiltration membrane commercialized by Tosoh Corporation, Tokyo, Japan. To 0.2 ml of the concentrate was added 10 pg of a lysyl endopeptidase reagent commercialized by Wako Pure Chemical Industries, Ltd., Tokyo, Japan, and the mixture was incubated at 30 C for 22 hours to digest the enzyme and to form peptides. The reaction mixture was subjected to reverse-phase HPLC using a column of "NOVA-PAK C18 COLUMN", 4.5 mm in diameter Sand 150 mm in length, commercialized by Waters Chromatography Div., Millipore Corp., Milford, MA, USA, to separate the peptides under ambient temperature. The elution step was carried out using a linear gradient of a 0.1 v/v aqueous trifluoroacetic acid solution containing acetonitrile increasing from 24 v/v to 48 v/v for 60 min during the feeding at a S. flow rate of 0.9 ml/min. Peptides eluate from the column was monitored by measuring at a wavelength of 210 nm. Two peptides, named "RT18" with a retention time of about 18 min and "RT33" with a retention time of about 33 min and well separated from others, were collected, dried in vacuo, and dissolved respectively in a 50 v/v aqueous acetonitrile solution containing 200 pl of 0.1 v/v trifluoroacetic acid. The peptide solutions were subjected to a protein sequencer to analyze up to 20 amino acid residues from the N-terminus of each peptide. The amino acid sequences of SEQ ID NOs:15 and 16 from the peptides RT18 and RT33, respectively.
Example 6 96 DNA encoding trehalose-releasing enzyme Example 6-1 Construction and screening of gene library According to Example 3-1, a gene library of Arthrobacter sp. S34, FERM BP-6450 was constructed, and then subjected to screening by applying colony hybridization method under the conditions as used in Example 3-1 except for using as a probe an oligonucleotide, having a nucleotide sequence encoding the present trehalose-releasing enzyme, prepared by the Sfollowing procedures; The probe was in a usual manner prepared by labelling with an isotope of [y- 32 P] ATP and T4 polynucleotide kinase the oligonucleotide having the nucleotide sequence of SEQ ID NO:31, which had been chemically synthesized based on an amino acid sequence consisting of amino acids 12-20 of SEQ ID NO:15 revealed in Example 5-4. A transformant which strongly hybridized with the prove was selected.
According to the method in Example 3-2, a recombinant DNA was extracted from the transformant and analyzed on conventional Southern blot technique using the above prove. A restriction map made based on the analytical data was coincided with that of the recombinant DNA pGY1 obtained in Examples 3-1 and 3-2. As shown in FIG. 5, it was revealed that the present recombinant DNA in this example contained a nucleotide sequence, which encoded the present trehalose-releasing enzyme as indicated with an oblique arrow, within a region consisting of bases of about 2,200 bp positioned between recognition sites by restriction enzymes, PstI and KpnI. Using the recombinant DNA pGY1, it was proceeded the decoding of the nucleotide sequence 97 of DNA encoding the present trehalose-releasing enzyme.
Example 6-2 Decoding of nucleotide sequence The recombinant DNA pGY1, obtained by the method in Example 3-2, was in conventional manner completely digested with a restriction enzyme, PstI. The DNA fragment of about 3,300 bp formed in the resulting mixture was removed on conventional agarose electrophoresis, and the formed DNA fragment of about 5,200 bp was collected. The DNA fragment was in a usual manner S* subjected to ligation reaction, and the ligated product was used to transform "XL1-BLUE", an Escherichia coli strain commercialized by Stratagene Cloning Systems, California, USA.
From the resultant transformant, a recombinant DNA was extracted by conventional method. The recombinant DNA was confirmed to have a region consisting of bases of about 2,200 bp comprising a nucleotide sequence encoding the present trehalose-releasing enzyme, and named "pGZ2". A transformant intr254oduce with pGZ2 was named a recombinant DNA pGZ2.
Analysis of Conventional dideoxy method for the nucleotide sequence of the recombinant DNA pGZ2 revealed that it contained a nucleotide sequence consisting of 2,218 bp bases as shown in SEQ ID NO:32 derived from Arthrobacter sp. S34, FERM BP-6450. The nucleotide sequence could encode the amino acid sequence in SEQ ID NO:32. The amino acid sequence was compared with those of SEQ ID NOs:14 to 16 as partial amino acid sequences of the present trehalose-releasing enzyme confirmed in Example 5-4. As a result, the amino acid sequences of SEQ ID NOs:14, 15 and 16 were respectively coincided with amino 98 acids 1-20, 298-317, and 31-50 of the amino acid sequence in SEQ ID NO:32. The data indicates that the trehalose-releasing enzyme in Example 5 comprises the amino acid sequence in SEQ ID NO:32 or the one of SEQ ID NO:9, and that the enzyme from Arthrobacter sp. S34, FERM BP-6450, is encoded by bases 477- 2,201 in SEQ ID NO:32 or the nucleotide sequence of SEQ ID NO:17. FIG. 12 shows the structure of the aforesaid recombinant DNA pGZ2.
The above amino acid sequence of the present trehalose-releasing enzyme, obtained by the method in Example 5, and other conventional ones of enzymes having an activity of trehalose-releasing enzyme were compared with each other in accordance with the method in Example 3-2 to determine their .**:*homology As conventional enzymes, those derived from Arthrobacter sp. Q36 disclosed in Japanese Patent Kokai No.
298,880/95; Rhizobium sp. M-11, disclosed in Japanese Patent Kokai No. 298,880/95; Sulfolobus acidocaldarius, ATCC 33909; and Sulfolobus solfataricus KM1 disclosed in Sai-Kohyo No.
W095/34642. All of these enzymes have optimum temperatures out of a medium temperature range. The amino acid sequences of these enzymes are available from the GenBank, a DNA database produced by the National Institutes of Health (NIH), USA, under the accession numbers of D63343, D64130, D78001, and D83245.
The information of their homology are in Table 7.
99 Table 7 Origin of enzyme for amino acid Homology on amino acid sequence(*) comparison sequence Arthrobacter sp. Q36 (D63343) 59.9% Rhizobium sp. M-ll (D78001) 59.1% Sulfolobus solfataricus KM1 (D64130) 37.7% Sulfolobus acidocaldarius, 36.0% ATCC 33909 (D83245) Numerals in parentheses are access numbers to the GeneBank.
o As shown in Table 7, the present trehalose-releasing enzyme in Example 5 showed a highest amino acid homology of 59.9% with the enzyme from Arthrobacter sp. Q36 among conventional enzymes with optimum temperatures out of a medium temperature range. The data indicates that the present trehalose-releasing enzyme generally comprises an amino acid sequence with a homology of at least 60% with the amino acid sequence of SEQ ID NO:9. The comparison result on amino acid sequence revealed that the enzyme in Example 5 and the aboveidentified four types of conventional enzymes have common amino acid sequences of SEQ ID NOs:10 and 13. The enzyme in Example has partial amino acid sequences of SEQ ID NOs:10 to 13 as found in amino acids 148-153, 185-190, 248-254 and 285-291 in SEQ ID NO:9. The four types of enzymes used as references have the above partial amino acid sequences which are positioned at their corresponding parts. Based on the fact that any of the present enzyme in Example 5 and the enzymes as references have commonly an activity of specifically hydrolysing a non-reducing 100 saccharide, which has a trehalose structure as an end unit and a glucose polymerization degree of at least three, at a site between a part of the trehalose structure and a part of the resting, it was indicated that the partial amino acid sequences of SEQ ID NOs:10 to 13 correlated to the expression of such an enzyme activity. These results show that the present trehalosereleasing enzyme can be characterized in that it comprises the amino acid sequences of SEQ ID NOs:10 to 13 and has an optimum temperature in a medium temperature range.
Example 6-3 S Transformant introduced with DNA Based on the and 3'-terminal nucleotide sequences of SEQ ID NO:17, oligonucleotides of the bases of SEQ ID NOs:33 and 34 were chemically synthesized in a usual manner. As senseand anti-sense-primers, 85 ng of each of the oligonucleotides and 100 ng of the recombinant DNA pGZ2 in Example 6-2 as a template were mixed in a reaction tube while adding another reagents in accordance with Example 3-3. The temperature for PCR was controlled in such a manner that the mixture was treated with 25 cycles of successive incubations of 95 C for one minute, 98 C for 20 seconds, 70 C for 30 seconds, and 72 C for four minutes, and finally incubated at 72°C for 10 min. A DNA as a PCR product was collected in a usual manner to obtain an about 1,700 bp DNA. The DNA thus obtained was admixed with "pKK233a plasmid vector commercialized by Pharmacia LKB Biotechnology AB, Uppsala, Sweden, which had been previously cleaved with a restriction enzyme, EcoRI, and blunted by "DNA BLUNTING KIT" commercialized by Takara Shuzo Co., Ltd., Tokyo, 101 Japan, and ligated by conventional ligation method. Thereafter, the ligated product was treated in a usual manner to obtain a recombinant DNA introduced with the above DNA consisting of bases of about 1,700 bp. Decoding of the recombinant DNA by conventional dideoxy method showed that it comprised a nucleotide sequence which a nucleotide sequence of 5'-TGA-3' was added to 3'-terminus of the nucleotide sequence of SEQ ID NO:17.
The DNA was named "pGZ3". The structure of the recombinant DNA pGZ3 was in FIG.13.
The recombinant pGZ3 was in a usual manner introduced into an Escherichia coli LE 392 strain, ATCC 33572, which had 9* been competented in conventional manner, to obtain a ***transformant. Conventional alkali-SDS method was applied for the transformant to extract a DNA and named "GZ3" by identifying transformant as pGZ3. Thus a transformant, introduced with the present trehalose-releasing enzyme, was obtained.
Example 6-4 Transformant introduced with DNA PCR was done similarly as in Example 6-3 except for 0 using, as sense- and anti-sense-primers, oligonucleotide having nucleotide sequences of SEQ ID NOs:35 and 36, respectively, which had been chemically synthesized based on the and 3'terminal nucleotide sequences of SEQ ID NO:17. A DNA as a PCR product was collected in a usual manner to obtain an about 1,700 bp DNA. The DNA thus obtained was cleaved with restriction enzymes, Xbal and Spel, and "pKK4", a plasmid vector obtained by the method in Example 3-4, which had been previously cleaved with restriction enzyme, Xbal and SpeI, were ligated in a usual 102 manner. Thereafter, the ligated product was treated in a usual manner to obtain a recombinant DNA comprising the nucleotide sequence of SEQ ID NO:17. The recombinant DNA thus obtained was named "pKGZl".
A nucleotide sequence in the upper part of the terminus of SEQ ID NO:17 contained in the recombinant DNA pKGZl was modified similarly as in Example 3-4; PCR as a first PCR-C was carried out similarly as in Example 3-3 except for using the above recombinant DNA pKGZl as a template and oligonucleotides of SEQ ID NOs:26 and 37, as sense- and anti-sense-primers, which had been chemically synthesized in a usual manner based on the S* nucleotide sequence of the plasmid vector pKK4. In parallel, PCR as a first PCR-D was carried out similarly as in Example 3-3 except for using the above recombinant DNA pKGZ1 as a template and oligonucleotides of SEQ ID NOs:38 and 39, as sense- and anti-sense-primers, which had been chemically synthesized in a usual manner based on the nucleotide sequences of SEQ ID NOs:38 and 39. A DNA as a PCR-C product was collected in a usual manner to obtain an about 390 bp DNA, while another DNA as a PCR-D product was collected similarly as above to obtain an about 590 bp DNA.
PCR as a second PCR-B was carried out similarly as in Example 3-3 except for using the DNA mixture obtained as products in the first PCR-C and first PCR-D, an oligonucleotide of SEQ ID NO:26 used in the first PCR-C as a sense primer, and an oligonucleotide of SEQ ID NO:39 used in the first PCR-D as an anti-sense primer. A DNA as a PCR product was collected in a usual manner to obtain an about 950 bp DNA.
103 The DNA as a second PCR-B product was cleaved with a restriction enzyme, EcoRI, and the formed about 270 bp DNA was collected in conventional manner. The recombinant DNA pKGZ1 was cleaved with a restriction enzyme, EcoRI, and the formed about 5,100 bp DNA was collected similarly as above. These DNAs were ligated as usual and treated in a usual manner to obtain a recombinant DNA comprising about 270 bp DNA from the second PCR- B product. Decoding of the recombinant DNA by conventional dideoxy method revealed that it contained the nucleotide sequence of SEQ ID NO:8, one of SEQ ID NO:17, and one represented by 5'-TGA-3' in the order as indicated from the S* to 3'-termini. The recombinant DNA thus obtained was named "pGZ4". The recombinant DNA pGZ4 had substantially the same structure as the recombinant DNA pGZ3 obtained in Example 6-3 except that it had the nucleotide sequence of SEQ ID NO:8.
The recombinant DNA pGZ4 was introduced into "BMH71- 18mutS", an Escherichia coli competent cell commercialized by Takara Shuzo Co., Ltd., Tokyo, Japan, to obtain a transformant.
Using conventional alkali-SDS method, a DNA was extracted from the transformant and confirmed to be pGZ4 according to conventional manner. It was named "GZ4". Thus a transformant introduced with a DNA encoding the present trehalose-releasing enzyme.
Example 7 Preparation of trehalose-releasing enzyme Example 7-1 Preparation of enzyme using microorganisms of the genus Arthrobacter 104 A seed culture of Arthrobacter sp. S34, FERM BP-6450, was inoculated to a nutrient culture medium and incubated by a fermenter for about 72 hours in accordance with the method in Example 2-1. After the incubation, the resultant culture was filtered and concentrated with an SF-membrane to obtain an about eight liters of cell suspension which was then treated with "MINI-LABO", a super high-pressure cell disrupter commercialized by Dainippon Pharmaceutical Co., Ltd., Tokyo, Japan, to disrupt cells. The cell disruptant was centrifuged to collect and obtain an about 8.5 supernatant as a cell extract.
Determination of the cell extract for trehalose-releasing enzyme activity revealed that the culture contained about 0.3 unit/ml 9 culture of the enzyme activity. To the cell extract was added ammonium sulfate to give a saturation degree of 0.7 to effect salting out, and then centrifuged to obtain the precipitate.
The precipitate was dissolved in 10 mM phosphate buffer (pH and dialyzed against a fresh preparation of the same buffer. The dialyzed inner solution was subjected to ionexchange chromatography using "SEPABEADS FP-DA13 GEL" commercialized by Mitsubishi Chemical Co., Ltd., Tokyo, Japan, in accordance with the method in Example 5-2 except that the resin volume used of the ion exchanger was about two liters, followed by collecting fractions having an trehalose-releasing enzyme activity. The fractions were pooled and dialyzed against a fresh preparation of the same buffer but containing 1 M ammonium sulfate, and then the dialyzed solution was centrifuged to obtain the formed supernatant. The supernatant was subjected to a hydrophobic column chromatography using "BUTYL TOYOPEARL 105 650M GEL", a hydrophobic gel commercialized by Tosoh Co., Ltd., Tokyo, Japan, in accordance with the method in Example 5-2 except that an about 350 ml of the gel was used, and then fractions with a trehalose-releasing enzyme activity were collected. The enzyme collected was confirmed to have an optimum temperature in a medium temperature range, i.e., temperatures over 45 C but below 60 C and an optimum pH in an acid pH range, a pH of less than 7.
Thus an about 6,400 units of the present trehalosereleasing enzyme was obtained.
Example 7-2 i: Preparation of enzyme using microorganism of the genus Arthrobacter A seed culture of Arthrobacter sp. S34, FERM BP-6450, was inoculated to a nutrient culture medium in accordance with the method in Example 7-1. To one of the resulting culture was added 100 mg "OVALBUMIN LYSOZYME", a lysozyme preparation, commercialized by Nagase Biochemicals, Ltd., Kyoto, Japan.
Then aeration was suspended, and cells were disrupted by keeping the culture for 24 hours under the same temperature and stirring conditions as used in the culture. The cell disruptant was subjected to a continuous centrifuge at 10,000 rpm, followed by collecting a supernatant as a cell extract. In accordance with the method in Example 7-1, the cell extract was treated with salting out, and the sediment was dialyzed. The resulting dialyzed inner solution was subjected to ion-exchange chromatography using "SEPABEADS FP-DA13 GEL", a product of Mitsubishi Chemical Co., Ltd., Tokyo, Japan, in accordance with 106 the method in Example 7-1 to collect fractions with a trehalosereleasing enzyme activity. The pooled fractions contained about 16,500 units of the present trehalose-releasing enzyme and about 5,500 units the present non-reducing saccharide-forming enzyme.
Thus an enzyme preparation containing the present two types of enzymes was obtained.
Example 7-3 Production of enzyme using transformant In a 500-ml Erlenmeyer flask were placed a 100 ml aqueous solution containing 16 g/S polypeptone, 10 g/S yeast extract, and 5 g/e sodium chloride, and the flask was autoclaved at 121 C for 15 min, cooled, aseptically adjusted to pH 7.0, and aseptically admixed with 10 mg ampicillin in a sodium salt to obtained a nutrient culture medium. The transformant "GZ2" obtained in Example 6-2 was inoculated into the liquid medium, followed by the incubation at 37 C for about 20 hours under aeration-agitation conditions to obtain a seed culture. Seven liters of a fresh preparation of the same medium as used in the seed culture were similarly prepared and placed in a fermenter, inoculated with 70 ml of the seed culture, and cultures for about 20 hours under aeration-agitation conditions.
Cells were collected by centrifuging the resulting culture in usual manner. The collected cells were suspended in 10 mM phosphate buffer (pH 7.0) and ultrasonicated to disrupt the cells. The resulting mixture was centrifuged to remove insoluble substances, followed by collecting a supernatant as a cell extract. The cell extract was dialyzed against 10 mM phosphate buffer (pH The dialyzed inner solution was 107 collected and confirmed to have an optimum temperature in a medium temperature range, temperatures over 45°C but below C and an optimum pH in an acid pH range, a pH of less than 7.
Thus the present trehalose-releasing enzyme was obtained. In this Example, an about 0.5 unit/ml culture of the trehalose-releasing enzyme was obtained.
As a control, "XL1-Blue", an Escherichia coli strain commercialized by Stratagene Cloning Systems, California, USA, was cultured under the same culture conditions as used in the above in a fresh preparation of the same culture medium as above but free of ampicillin, followed by collecting and dialyzing a cell extract similarly as above. No trehalose-releasing enzyme activity was observed, meaning that the transformant GZ2 can be advantageously used in producing the present trehalose-releasing enzyme.
*e Example 7-4 Production of enzyme using transformant "The transformant GZ3 in Example 6-3 was cultured similarly as in Example 7-3 except for using a liquid nutrient culture medium (pH 7.0) consisting of one w/v maltose, three w/v polypeptone, one w/v "MEAST PIG" commercialized by Asahi Breweries, Ltd., Tokyo, Japan, 0.1 w/v dipotassium hydrogen phosphate, 100 pg/ml ampicillin, and water. The resulting culture was treated with ultrasonication to disrupt cells, and the mixture was centrifuged to remove insoluble substances.
Measurement of the trehalose-releasing enzyme activity in the resulting supernatant revealed that it contained about 108 units/ml culture of the enzyme. In accordance with the method in Example 5-2, the supernatant was purified and confirmed that the purified specimen had an optimum temperature in a medium temperature range, temperatures over 45 C but below 60 C and an optimum pH in an acid pH range, a pH of less than 7. Thus the present trehalose-releasing enzyme was obtained.
Example Production of enzyme using transformant The transformant GZ4 in Example 6-4 was cultured similarly as in Example 4-4. The resulting culture was treated with ultrasonication to disrupt cells, and the mixture was centrifuged to remove insoluble substances. Measurement of the trehalose-releasing enzyme activity in the resulting supernatant revealed that it contained about 250 units/ml culture of the enzyme. In accordance with the method in Example 5-2, the supernatant was purified and confirmed that the purified specimen had an optimum temperature in a medium temperature range, temperatures over 45 C but below 60 C and an optimum pH in an acid pH range, a pH of less than 7. Thus the present trehalose-releasing enzyme was obtained.
Example 8 Saccharide production Example 8-1 Production of non-reducing saccharide syrup A 6 w/w potato starch suspension was gelatinized by heating, adjusted to pH 4.5 and 50°C, admixed with 2,500 units/g starch, and enzymatically reacted for 20 hours. The reaction mixture was adjusted to pH 6.5, autoclaved at 120 C for 109 min, cooled to 40°C, admixed with 150 units/g starch, d.s.b., of "TERMAMYL 60L", an a-amylase specimen commercialized by Novo Nordisk Industri A/S, Copenhagen, Denmark, and subjected to an enzymatic reaction for 20 hours while keeping at the temperature. The reaction mixture was autoclaved at 120°C for min, cooled to 53 C, adjusted to pH 5.7, admixed with one unit per gram starch, of a non-reducing saccharideforming enzyme obtained by the method in Example 4-1, and subjected to an enzymatic reaction for 96 hours. The reaction mixture thus obtained was heated at 97 C for 30 min to inactivate the remaining enzyme, cooled, filtered, purified in a usual manner by decoloration with an activated charcoal and desalting with ion exchangers, and concentrated to obtain an about 70 w/w syrup in a yield of about 90% to the material starch, d.s.b.
The product, which has a low DE of 24 and contains aglucosyltrehalose, a-maltosyltrehalose, a-maltotriosyltrehalose, a-maltotetraosyltrehalose, and a-maltopentaosyltrehalose in respective amount of 11.5, 5.7, 29.5, 3.5, and has a mild and high-quality sweetness, and a satisfactory viscosity and moisture-retaining ability. It can be arbitrarily used as a sweetener, taste-improving agent, quality-improving agent, stabilizer, filler, adjuvant or excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-2 Production of syrup containing non-reducing saccharide To a 33 w/w corn starch suspension was added calcium carbonate to give a final concentration of 0.1 w/w and then 110 the mixture was adjusted to pH 6.5, admixed with 0.2 w/w per starch, of "TERMAMYL 60L", a liquefying a-amylase specimen commercialized by Novo Nordisk Industri A/S, Copenhagen, Denmark, and enzymatically reacted at 95°C for min to liquefy the starch. The liquefied starch was autoclaved at 120 C for 10 min, cooled to 53 C, admixed with one unit/g starch, of a maltotetraose-forming enzyme from a Pseudomonas stutzeri strain commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan, and two units/g starch, of a non-reducing saccharide-forming enzyme obtained by the method in Example 4-2, and enzymatically reacted for 48 hours. The reaction mixture was admixed with 15 units of "a-AMYLASE 2A", an a-amylase specimen commercialized by Ueda Chemical Co., Ltd., Osaka, Japan, and then incubated at 65 C for two hours, autoclaved at 120 C for 10 min, and cooled. The resulting mixture was filtered, and in a usual manner purified by treatments of coloration using an activated charcoal and of desalting using ion exchangers, and concentrated into an about 70 w/w syrup, in a yield of about 90% with respect to the material starch, d.s.b.
C
The product, which has a low DE of 18.5 and contains a-glucosyltrehalose, a-maltosyltrehalose, amaltotriosyltrehalose, a-maltotetraosyltrehalose, and amaltopentaosyltrehalose in respective amount of 9.3, 30.1, 0.9, 0.8, and has a mild and high-quality sweetness, and a satisfactory viscosity and moisture-retaining ability.
It can be arbitrarily used as a sweetener, taste-improving agent, quality-improving agent, stabilizer, filler, adjuvant or 111 excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-3 Production of non-reducing saccharide A 20 w/w aqueous solution of any of reducing partial starch hydrolyzates of maltotriose, maltotetraose, maltopentaose, maltohexaose, and maltoheptaose, which are all produced by Hayashibara Biochemical Laboratories Inc., Okayama, Japan, admixed with two units/g reducing partial starch hydrolyzate of a purified specimen of non-reducing saccharideforming enzyme obtained by the method in Example 2-2, and subjected to an enzymatic reaction at 50 C and pH 6.0 for 48 a hours. From each of the above-identified reducing partial starch hydrolyzates were respectively formed aglucosyltrehalose, a-maltosyltrehalose, a-maltotriosyltrehalose, a-maltotetraosyltrehalose, and a-maltopentaosyltrehalose as reducing saccharides. Saccharides in each reaction mixture were in conventional manner fractionated by the following successive treatments: Inactivation of the remaining enzyme by heating, filtration, decoloration, desalting, concentration, and column chromatography using "XT-1016 (Na'-form)", an alkali-metal strong-acid cation exchange resin with a polymerization degree of commercialized by Tokyo Organic Chemical Industries, Ltd., Tokyo, Japan. The conditions used in the column chromatography were as follows: The inner column temperature was set to 55 C, the load volume of a saccharide solution to the resin was about 5 v/v and the flow rate of water heated to as a moving bed was set to SV (space velocity) 0.13. An 112 eluate from each column, which contained at least 95 w/w of any of the above-identified non-reducing saccharides, d.s.b., with respect to saccharide composition, was collected. To each collected eluate was added sodium hydroxide to give a concentration of 0.1 N, and the mixture was heated at 100 C for two hours to decompose the remaining reducing saccharides. The reaction mixtures thus obtained were respectively decolored with an activated charcoal, desalted with ion exchangers in H- and OH-form, concentrated, dried in vacuo, and pulverized into powdery a-glucosyltrehalose, a-maltosyltrehalose, amaltotriosyltrehalose, a-maltotetraosyltrehalose, and amaltopentaosyltrehalose with a purity of at least 99.0 w/w d.s.b.
The products, containing highly-purified non-reducing saccharides and having a more lower DE, can be arbitrarily used as a taste-improving agent, quality-improving agent, stabilizer, filler, adjuvant or excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-4 Production of crystalline powder containing non-reducing 0"0 saccharide An aqueous 20 w/w solution of maltopentaose commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan, was prepared, admixed with two units/g maltopentaose, of a non-reducing saccharide-forming enzyme obtained by the method in Example 4-3, and enzymatically reacted at 50 C for 48 hours, resulting in a conversion of about maltopentaose into a-maltotriosyltrehalose. The reaction 113 mixture was heated at 97 C for 30 min to inactivate the remaining enzyme, and then cooled, filtered, and purified by decoloration using an activated charcoal and desalting using ion exchangers.
Thereafter, the resulting solution was concentrated into an about 75 w/w solution with respect to solid contents, admixed with an about 0.01 w/v a-maltotriosyltrehalose crystal as a seed crystal, and allowed to stand for 24 hours. Then the crystallized a-maltotriosyltrehalose crystal was collected by a centrifuge, washed with a small amount of cold water, and dried in a usual manner to obtain a crystalline powder with a relatively-high content of the non-reducing saccharide in a Syield of about 50% to the material solids, d.s.b.
The product, having a relatively-low sweetness and an extremely-low DE of less than 0.2 and containing at least 99.0 w/w of a-maltotriosyltrehalose as a non-reducing saccharide, can be arbitrarily used as a taste-improving agent, qualityimproving agent, stabilizer, filler, adjuvant or excipient in o. compositions in general such as foods, cosmetics, and pharmaceuticals.
Example Process for producing hydrous crystalline trehalose Corn starch was suspended in water into a 30 w/w starch suspension which was then admixed with calcium carbonate in an amount of 0.1 w/w The mixture was adjusted to pH and then admixed with 0.2 w/w per starch, of "TERMAMYL a liquefying a-amylase specimen commercialized by Novo Nordisk Industri A/S, Copenhagen, Denmark, and enzymatically 114 reacted at 95 0 C for 15 min to gelatinize and liquefy the starch.
The resulting mixture was autoclaved at 120 C for 30 min, cooled to 51 C, adjusted to pH 5.7, and enzymatically reacted at the same temperature for 64 hours after admixed with 300 units/g starch, of an isoamylase specimen commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan; two units/g starch, of a cyclomaltodextrin glucanotransferase specimen commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan; two units of a non-reducing saccharide-forming enzyme obtained by the method in Example 4-1; and 10 unit/g starch, of a trehalosereleasing enzyme obtained by the method in Example 7-1. The reaction mixture was heated at 97 C for 30 min to inactivate the remaining enzyme, and then cooled 50 C, admixed with 10 unit/g starch, of "GLUCOZYME", a glucoamylase specimen commercialized by Nagase Biochemicals, Ltd., Kyoto, Japan, and subjected to an enzymatic reaction for 24 hours. The reaction mixture thus obtained was heated at 95 C for 10 min to
S
inactivate the remaining enzymes, cooled, filtered, purified by decoloration using an activated charcoal and desalting using ion exchangers, and concentrated to an about 60 w/w solution with respect to solid contents or a syrup containing 84.1 w/w trehalose, d.s.b. The syrup was concentrated up to give a concentration of about 83 w/w and the concentrate was placed in a crystallizer, admixed with an about 0.1 w/v hydrous crystalline trehalose to the syrup, and stirred for about two hours to crystallize the saccharide. The resulting crystals were collected by a centrifuge, washed with a small 115 amount of water to remove molasses, dried by air heated to 45 C to obtain hydrous crystalline trehalose with a purity of at least 99% in a yield of about 50% to the material starch, d.s.b.
Since the product is substantially free from hygroscopicity and easily handleable, it can be arbitrarily used as a sweetener, taste-improving agent, quality-improving agent, stabilizer, filler, adjuvant or excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-6 Process for producing crystalline powder containing anhydrous crystalline trehalose Using the method in Example 8-5 hydrous crystalline o o trehalose was prepared, and the saccharide was dried in vacuo using a jacketed rotary-vacuum-dryer. The drying was conducted !at 90 C and 300-350 mmHg for about seven hours. After the drying, the above temperature and pressure were returned to ambient temperature and normal pressure before collecting the product or a crystalline powder containing at least 90 w/w o anhydrous crystalline trehalose, d.s.b.
Since anhydrous crystalline trehalose absorbs moisture in hydrous matters and changes in itself into hydrous 0 crystalline trehalose, the product rich in the saccharide can be arbitrarily used as a non-harmful safe desiccant to dehydrate or dry compositions including food products, cosmetics and pharmaceuticals, as well as materials and intermediates thereof.
The product with a mild and high-quality sweetness can be arbitrarily used as a sweetener, taste-improving agent, qualityimproving agent, stabilizer, filler, adjuvant or excipient in 116 compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-7 Process for producing trehalose syrup A 27 w/w suspension of tapioca starch was admixed with calcium carbonate to give a final concentration of 0.1 w/w adjusted to pH 6.0, admixed with 0.2 w/w per starch, of "TERMAMYL 60L", a liquefying a-amylase specimen commercialized by Novo Nordisk Industri A/S, Copenhagen, Denmark, and enzymatically reacted at 95 C for 15 min to gelatinize and liquefy the starch. The resulting mixture was autoclaved at a pressure of 2 kg/cm 2 for 30 min, cooled to 53 C, adjusted to pH 5.7, and enzymatically reacted at the same temperature for 72 hours after admixed with 500 units/g starch, of "PROMOZYME 200L", a pullulanase specimen 0.
commercialized by Novo Nordisk Industri A/S, Copenhagen, Denmark; one unit/g starch, of Pseudomonas stutzeri strain commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan; about two units/g starch, of a non-reducing saccharide-forming enzyme and about six units/g starch, of a trehalose-releasing enzyme, obtained by the method in Example 7-2. The reaction mixture thus obtained was heated at 97 C for 15 min, cooled and filtered to obtain a filtrate. The filtrate was in a usual manner purified by decoloration using an activated charcoal and desalting using ion exchangers, and concentrated to an about 70 w/w syrup with respect to solid contents in a yield of about 92% to the material, d.s.b.
117 The product, comprising 35.2% trehalose, 3.4% aglucosyltrehalose, 1.8% glucose, 37.2% maltose, 9.1% maltotriose, and 13.3% oligosaccharides higher than maltotetraose, has a mild and high-quality sweetness, relatively-lower reducibility and viscosity, and adequate moisture-retaining ability; it can be arbitrarily used as a sweetener, taste-improving agent, quality-improving agent, stabilizer, filler, adjuvant or excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
Example 8-8 Process for producing crystalline powder containing anhydrous crystalline trehalose One part by weight of an amylose commercialized by Hayashibara Biochemical Laboratories Inc., Okayama, Japan, was dissolved in 15 parts by weight of water by heating, and the solution was heated to 53 C and adjusted to pH 5.7. To the resulting solution was added two units/g amylose, of a non-reducing saccharide-forming enzyme, obtained in Example 4-3, and six units/g amylose, of a trehalosereleasing enzyme, obtained by the method in Example 7-4, followed by an incubation for 48 hours. The reaction mixture was heated at 97 C for 30 min to inactivate the remaining enzyme, and then adjusted to pH 5.0, admixed with 10 units/g amylose, of "GLUCOZYME", a glucoamylase specimen commercialized by Nagase Biochemicals, Ltd., Kyoto, and enzymatically reacted for 40 hours. The reaction mixture thus obtained was heated at 95 C for 10 min to inactivate the remaining enzymes, cooled, filtered, purified by decoloration 118 using an activated charcoal and desalting using ion exchangers, and concentrated to an about 60 w/w solution with respect to solid contents or a syrup containing 82.1 w/w trehalose, d.s.b.
Similarly as in Example 8-3, the syrup was subjected to column chromatography, followed by collecting a fraction containing about 98 w/w trehalose, d.s.b. The fraction was concentrated in vacuo under heating conditions into an about w/w syrup with respect to solid contents. The syrup was admixed with hydrous crystalline trehalose as a seed crystal in an about 2 w/v of to the syrup, stirred at 120 C for five minutes, distributed to plastic vats, and dried at 100C in vacuo to crystallize the saccharide. Thereafter, the contents in a block form were detached from the vats and cut with a cutter to obtain a solid product, containing anhydrous go crystalline trehalose with a crystallinity of about 70% and having a moisture content of about 0.3 w/w in a yield of about to the material amylose, d.s.b. The solid product was pulverized in a usual manner into a crystalline powdery containing anhydrous crystalline trehalose.
Since anhydrous crystalline trehalose absorb moisture from hydrous matters and changes into hydrous crystalline trehalose, the product rich in anhydrous crystalline trehalose can be arbitrarily used as a non-harmful safe desiccant to dehydrate or dry compositions including food products, cosmetics and pharmaceuticals, as well as materials and intermediates thereof. The product with a mild and high-quality sweetness can be arbitrarily used as a sweetener, taste-improving agent, 119 quality-improving agent, stabilizer, filler, adjuvant or excipient in compositions in general such as foods, cosmetics, and pharmaceuticals.
As described above, the present invention was made based on the finding of a novel non-reducing saccharide-forming enzyme and a novel trehalose-releasing enzyme, which have an optimum temperature in a medium temperature range and preferably have an optimum pH in an acid pH range. These enzymes according to the present invention can be obtained in a desired amount, for example, by culturing microorganisms capable of producing the enzymes. The present DNAs which encode either of the enzymes are quite useful in producing such enzymes as recombinant proteins. In cases of using transformant introduced with the DNAs, the enzymes according to the present invention can be yielded in a desired amount. The present enzymes can be used in producing non-reducing saccharides having a trehalose structure, which include trehalose, in a medium temperature rang and/or an acid pH range. Particularly, when used the present enzymes in combination with other saccharide-related enzymes having an optimum temperature in a medium temperature rang and/or an optimum pH in an acid pH range, desired saccharides can be produced quite efficiently. The enzymes according to the present invention are ones with revealed amino acid sequences; they can be safely used to produce the non-reducing saccharides to be used in food products and pharmaceuticals. The nonreducing saccharides and reducing saccharides, which contain the same and have a lesser reducibility, produced by the present invention have a mild and high-quality sweetness, and most 120 preferably have an insubstantial reducibility or a reduced reducibility by a large margin. Therefore, the saccharides can be arbitrarily used as in compositions in general such as foods, cosmetics, and pharmaceuticals with lesser fear of coloration and deterioration.
The present invention with these unfathomable advantageous properties and features is a useful invention that would greatly contribute to this art.
While there has been described what is at present considered to be the preferred embodiments of the invention, it will be understood that various modifications may be made therein, and it is intended to cover in the appended claims all coo• such modifications as fall within the true spirit and scope of the invention.
Where the terms "comprise", "comprises", "comprised" or "comprising" are used in this specification, they are to be interpreted as specifying the presence of the stated features, *.integers, steps or components referred to, but not to preclude the presence or addition of one or more other feature, integer, step, component or group thereof 121 10O258394/601 SEQUENCE LISTING (1)INFORMATION FOR SEQ ID NO:1: (i )SEQUENCE CHARACTERISTICS: A) LENGTH :756 (B )TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (xi)SEQUENCE DESCRIPTION:SEQ ID NO:1: Pro Ala Ser Thr Tyr Arg Leu Gin Ile Ser Ala Giu Phe Thr Leu Phe S.
S
S. 55 S S S S
S.
SSS*
S S .5 5
S-S.
S .5 Asp Leu Tyr Giu 65 Val Ala Tyr Arg Val 145 Giu Tyr Arg Arg Gly 225 Pro Ile Trp Arg Asp 305 Arg Val Ala Tyr Asp Gly Val Asn Ala Leu 130 Asp Gly Giu Phe Val 210 Leu Giy Trp Ala Leu Val Leu Val Arg Asp 115 Pro Giy Thr Leu Phe 195 Phe Val Asp Val Arg Ser Val Ala Asp Trp 100 Tyr Val Asp Gly Met 180 Ala Asp Asp Tyr Giu 260 Ile Pro Asp Giu Ile 85 Trp Phe Leu Giu Gly 165 Ser Val Asp Gly Leu 245 Lys Gly Asp Gly Val 325 Leu Val Leu His Leu 70 Val Trp Asp Gly Leu 150 Gly Trp Asn Thr Leu 230 Arg Ile Thr Pro Ser 310 Ala Gly Pro Leu Ser 55 Ser Pro Asp Ile Asp 135 Val Thr Arg Thr His 215 Arg Arg Ile Thr Ala 295 Pro Arg Glu Tyr Leu His Arg Leu 25 Glu Ser Giu Ser Gly 40 Arg Val Asp Ala Ala Arg Ala Ala His Giu 75 Asn His Val Gly Val 90 Val Leu Ala Arg Gly 105 Asp Trp Glu Phe Gly 120 Gly Pro Asp Giu Leu 140 Tyr Tyr Glu His Arg 155 Pro Arg Glu Val His 170 Arg Ala Asp His Asp 185 Leu Ala Ala Val Arg 200 Arg Giu Ile Gly Arg 220 Val Asp His Pro Asp 235 Leu Ala Glu Leu Ala 250 Giu Gly Asp Giu Arg 265 Gly Tyr Asp Ala Leu 280 Gly Glu His Pro Leu 300 Arg Arg Trp Ala Giu 315 Gly Ile Leu Asn Ser 330 Val Ala Gly Asp Val 345 Gly Ala Asp Ser Ser His Arg Gly Gly Arg Gly Met Ala Thr Pro Gin Arg Ser 110 Gly Gly Arg 125 Asp Ala Leu Phe Pro Ile Asp Arg Gin 175 Leu-Asn Tyr 190 Val Glu Asp 205 Trp Ile Ala Gly Leu Arg Gin Gly Arg 255 Met Pro Pro 270 Ala Gly Ile 285 Thr Gin Ile Leu Val Pro Giu Ile Arg 335 Glu Asp Ala 350 Trp Gly Pro Gly Lys Glu Leu Arg Ala 160 His Arg Pro Glu Ala 240 Pro Gin Asp Val Glu 320 Arg Leu 6 Pro Ile Ala Val 290 Giu Lys Ala Leu Val Ala Ala Arg Ala Arg Glu 340 Val Glu Ilie Ala Ala Ala Leu Ser Val Tyr Arg Ser Tyr Leu Pro Phe Gly Pro 385 Pro Met Thr Ala Glu 465 Thr Arg Leu Arg Giu 545 Thr Leu Leu Tyr Arg 625 Asp Leu Phe Leu Pro 705 Val Gly Leu 355 Arg Giu 370 Gin Leu Gly Asn Ala Lys Ser Leu 435 Ala Ala 450 Ser Met Arg Ala Phe Leu Giu Asn 515 Giu Arg 530 Ser Thr Arg Leu Giu Arg Ala Ala 595 Gin Gly 610 Arg Pro Gly Gly Val Val Thr Ala 675 Ile Gly 690 Leu Gly Giy Giu Ala Ala Val Giu 755 His Leu Asp Glu Glu Pro Gly 420 Thr Phe Thr Arg Thr 500 Leu Leu Asp Val Leu 580 Lys Thr Val Trp Ser 660 Tyr Phe Leu Arg Arg 740 Thr Ala Ala 405 Val Giu His Thr Ile 485 Giu Ile Giu Trp Thr 565 Val Leu Giu Asp Arg 645 Arg His Asp Ala Ser 725 Val Asp 390 Ala Glu Val Ala Leu 470 Thr Val Trp Ala Ile 550 Val Asp Leu Arg Phe 630 Pro Ala Pro Arg Ala 710 Leu Ala 375 Leu Asp Gly Ala 455 Thr Ala Gly Gin Tyr 535 Asp Ala Giu Gin Trp 615 Ala Pro Leu Val Gly 695 Ala Arg Giu 360 Ala Ala Arg Asn Gly 440 Gin Thr Leu Gly Ala 520 Ala Gly Val Leu Leu 600 Asp Ala Val Arg Thr 680 Gly Gly Asp Leu Ala Phe Ala 425 Asp Arg His Ala Leu 505 Ile Leu Asp Glu Thr 585 Leu Arg Ala Asp Leu 665 Ala Ala Gly Giu Phe 745 Val Ala Ala Ala Val Gly 395 Gin Gin 410 Phe Tyr Pro Ser Asp Arg Asp Thr 475 Giu Ala 490 Ile Gly Val Gly Lys Ala Pro Ala 555 Giu Pro 570 Ala Ala Ala Pro Ser Leu Ser Giu 635 Glu Thr 650 Arg Arg Arg Gly Ile Ala Trp Gly 715 Leu Thr 730 Ala Asp Ala Thr Arg Leu Ala 460 Lys Pro Thr Ala Ala 540 Phe Leu Gly Gly Val 620 Leu Gly Asp Ala Leu 700 Asp Gly Tyr 365 Gin Ala Ser Tyr Phe 445 Ala Arg .Giu Gly Trp 525 Arg Glu Val Tyr Thr 605 Asp Leu Ala Arg Gin 685 Ala Thr Arg Pro Ala Ala Ala Leu Gly Pro 430 Ala Arg Ser Arg Asp 510 Pro Giu Giu His Ser 590 Pro Pro Asp Val Pro 670 Ala Thr Val Giu Val 750 Ala Met 415 Arg Ile Leu Giu Trp 495 Arg Ala Ala Arg Giu 575 Asn Asp Asp Arg Lys 655 Giu Giu Arg Val Ala 735 Ala Asp 400 Ile Leu Asp Pro Asp 480 Arg Val Ser Gly Leu 560 Leu Gly Val Asn Leu 640 Thr Leu His Leu Asp 720 Arg Leu 4.44 *4*4 4* 4 4.
4* 4* 4 4444 *4*4 44444e 4 (2)INFORMATION FOR SEQ ID NO:2: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 6 (B )TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NQ:2: Asp Ile Val Pro Asn His 1 (3)INFORMATION FOR SEQ ID NO:3: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 6 (B )TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:3: Gly Thr Thr Gly Tyr Asp 1 (4)INFORMATION FOR SEQ ID NO:4: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B)TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE :peptide FRAGMENT TYPE :N-terminal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:.4: Pro Ala Ser Thr Tyr Arg Leu Gin Ile Ser Ala Glu Phe Thr Leu Phe 1 5 10 **Asp Ala Ala Arg FOR SEQ ID (i)SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID Ser Leu Val Asp Pro Asp Asn Arg Arg Pro Val Asp Phe Ala Ala Ala 1 5 10 Ser Glu Leu Leu (6)INFORMATION FOR SEQ ID NO:6: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE :amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:6: 124 Ala Asri Arg Trp Trp Trp Asp Val Leu Ala Arg Gly Gin Arg Ser Glu 1 5 10 Tyr Ala Asp Tyr (7)INFORMATION FOR SEQ ID NO:7: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH:2268 (B )TYPE nucleic acid (C )strandedness double (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:7: 9 9 9 9.99 9999 9 99 9 99 9 .9 99 9 9 990 9*9999 9
CCCGCCAGTA
ATCGTGCCCT
TCCGAGTCGG
CGCGGCGGGC
GTCGTCGTCG
TGGTGGGACG
TGGGAGTTCG
GACGCGCTGA
GAGGGCACCG
TCGTGGCGGC
GCCGCCGTAC
TGGATCGCCG
CCCGGCGACT
AAGATCATCG
TACGACGCGC
ACCCAGATCG
CGCAAGCGGG
CTCGGAGAGG
GTCTACCGCA
CAGGCCGCAG
CCGGGCAACC
GTCGAGGACA
GACCCGAGCC
GCCCGGCTGC
ACCCGGGCGC
GAGGTCGGCG
ATCGTCGGCG
CGCGAAGCCG
ACCCGCCTGG
GTCGACGAGC
CTCGCCCCCG
GACCCGGACA
GACGGCGGCT
CGCGCGCTGC
GCGCGCGGCG
GCCACCCGCC
GTCGGCGAGC
GTGGCCGAGT
CCTACCGCCT
ACCTGCACCG
GCTCCTCGCA
CGGAGGGGCT
ACATCGTGCC
TTCTGGCCCG
GCGGCGGCAG
GAGTGGATGG
GCGGCGGCAC
GGGCCGACCA
GCGTCGAAGA
AGGGCCTCGT
ACCTGCGCCG
AGGGCGACGA
TGGCCGGGAT
TCGACGAGGC
CCGTCGCCCG
TCGCCGGCGA
GCTACCTGCC
CCCCCCAGCT
CCGCCGCGCT
ACGCGTTCTA
TGTTCGCGAT
CCGAGTCGAT
GGATCACCGC
GGCTCATCGG
CGTGGCCGGC
GCGAGTCGAC
TCACGGTCGC
TGACGGCGGC
GAACCCCCGA
ACCGTCGCCC
GGCGGCCGCC
GGCTGCGCCG
CGCAGGCCGA
TGCCGCTCGG
GGAGCCTGCG
TCAGATCTCG
CCTCGGCGCC
CGGCTACGAC
CGCCGAGCTC
CAACCACGTC
TGGACAGCGG
GCTGCGCCTG
CGACGAGCTC
CCCGCGCGAG
CGACCTCAAC
CCCGCGCGTG
CGACGGCCTG
TCTCGCCGAG
GCGGATGCCC
CGACCGGGTG
GGCAGGCAGC
CGGCATCCTG
CGTCGAAGAC
GTTCGGGCGC
CGAGGCCGAC
CCGCTTCCA.G
CCGCTACCCC
CGACGCGGCC
GACGACGCTG
GCTCGCCGAG
AACGGGCGAC
GAGCCGGGAG
CGACTGGATC
CGTCGAGGAG
CGGGTACTCC
CGTGTACCAG
CGTGGATTTC
CGTCGACGAG
CGACCGGCCC
GCACCTGATC
CCTCGCCGCC
CGACGAGCTG
GCGGAGTTCA
GACTGGCTGT
GTGGTCGACC
TCCCGTGCGG
GGCGTCGCGA
TCGGAGTACG
CCCGTGCTCG
GTCTACTACG
GTGCACGACC
TACCGCCGCT
TTCGACGAC.A
CGCGTCGACC
CTCGCCCAAG
CCGCAGTGGC
CTCGTCGACC
CCCCGGCGCT
AACTCCGAGA
GCGCTCGTCG
GAGCACCTCG
CTCGCCGCCG
CAGACCAGCG
CGGCTCACCT
GCCTTCCACG
ACCACCCACG
GCCCCCGAAC
CGGGTGCTGG
CGGCTCGAGG
GACGGCGACC
CCGCTCGTGC
AACGGCCTCG
GGCACGGAAC
GCCGCGGCAT
ACCGGCGCGG
GAGCTGTTCA
GGCTTCGACC
GCAGGCGGCT
ACCGGCCGCG
CCCTCTTCGA
ACCTCTCGCC
ACTCCCGCGT
CGCACGAGCG
CGCCGAAGGC
CCGACTACTT
GCGACGGCCC
AGCACCGCTT
GGCAGCACTA
TCTTCGCCGT
CCCACCGCGA
ACCCCGACGG
GCAGGCCGAT
CCATCGCCGG
CCGCGGGCGA
GGGCCGAGCT
TCCGCCGCGT
AGATCGCCGC
ACGAAGCCGT
TCGGCGCAGC
GCATGATCAT
CGCTGACCGA
CGGCGCAGCG
ACACCAAGCG
GCTGGCGGCG
AGAACCTGAT
CCTACGCGCT
CCGCGTTCGA
ACGAGCTGCT
CGGCGAAGCT
GCTGGGACCG
CCGAGCTGCT
TCAAGACGCT
CCGCGTACCA
GCGGCGGCGC
GGGGCGACAC
AGGCCCGCGG
CGCGGCGCGC GCTGCTCGAG 120 CGACGCCGCC 180 CGGCATGGGC 240 GAACCGCTGG 300 CGACATCGAC 360 CGACGAGCTC 420 CCCGATCGCC 480 CGAGCTGATG 540 GAACACGCTC 600 GATCGGCCGC 660 GCTGCGCGCC 720 CTGGGTCGAG 780 CACCACCGGC 840 GCATCCGCTC 900 GGTTCCCGAG 960 CGCCCGCGAA 1020 CGCCCTGTCC 1080 GGCCGCCGCG 1140 GCTCGCCGAC 1200 GGCCAAGGGC 1260 GGTCGGGGGA 1320 CGACCGCGCC 1380 CAGCGAAGAC 1440 CTTCCTGACC 1500 CTGGCAGGCG 1560 GAAGGCCGCG 1620 AGAGCGGCTG 1680 CGAGCGGCTC 1740 GCTGCAGCTG 1800 GTCGCTGGTG 1860 CGACCGCCTC 1920 CGTCGTCTCC 1980 CCCGGTCACG 2040 GATCGCCCTG 2100 GGTCGTCGAC 2160 AGCGGCGCGC 2220 2268 TGTTCGCCGA CTACCCCGTC GCCCTGCTGG TGGAGACA (8)INFORMATION FOR SEQ ID NO:8: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 28 (B )TYPE:nucleic acid 125 (C)strandedness:double (D)TOPOLOGY:linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:8: TTTTTTAATA AAATCAGGAG GAAAAAAT (9)INFORMATION FOR SEQ ID NO:9: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:575 (B)TYPE:amino acid (D)TOPOLOGY:linear (ii)MOLECULE TYPE:peptide (xi)SEQUENCE DESCRIPTION:SEQ *o 9* Met Asn 1 Leu Val Asn Gly Val Asp Arg Ser Asp Pro Leu Thr Glu Gly Leu Gly 130 Thr His 145 Pro Tyr Ala Arg Pro Ser Ala Ala 210 Asp Glu 225 Asp Met Asp Ala Glu Leu Asp Leu 290 Gly Leu 305 Asn Val Arg Val Trp Tyr Leu Ala Gly Thr 115 Val Gly Gly Gly Gly 195 Asn Val His Arg Ala 275 Asn Asp Thr Arg Gly Trp Gly Arg Arg Ala 100 Leu Asp Trp Gly Leu 180 Asn Thr Arg Ala Ala 260 Gly Asp Ala Gly 5 Gln Ala Tyr Gln Tyr Val Asp Ala Gly Pro 165 Ala His Trp Arg Asp 245 Leu Glu Pro Gln Glu 325 Gly Leu Leu Pro 70 Ala Ile Ser Val Tyr 150 Glu Val Leu Gly Tyr 230 Gly His Leu Lys Trp 310 Thr Arg Gln Val 55 Arg Trp Tyr Ala Glu 135 Asp Ala Val Pro Asp 215 Ile Leu Leu Gly Leu 295 Asp Val Ala Gln 40 Asp Gly Gly Glu Ile 120 Leu Gly Tyr Gln Asp 200 Ala Ile Arg Leu Arg 280 Ile Asp Gly Phe Pro Val Trp ID NO:9: Ala Pro Gln Ala 10 Glu Leu Pro Leu 25 Pro Trp Asp Gly Gly Lys Gly Pro Val His Glu Leu 75 Asp Asp Gly Trp 90 Leu His Val Gly 105 Arg Arg Leu Asp Leu Pro Val Asn 140 Val Leu Trp Tyr 155 Gln Arg Phe Val 170 Asp Val Val Tyr 185 Phe Gly Pro Tyr Leu Asn Leu Asp 220 Asp Asn Ala Val 235 Leu Asp Ala Val 250 Glu Glu Leu Ala 265 Pro Leu Thr Leu Arg Ser Arg Ala 300 Asp Val His His 315 Tyr Tyr Ala Asp 330 Ala Thr Gly Phe Gly Arg Thr His 125 Ala Ala Asp Asn Leu 205 Gly Tyr His Ala Ile 285 Ala Ala Phe Gln Arg Pro Ala Arg Gly Phe 110 Leu Phe Val Ala His 190 Gly Pro Trp Ala Arg 270 Ala His Val Gly Val Asp Asp Asp Glu Arg Thr Val Asn His Cys 175 Leu Ser Leu Leu Leu 255 Val Glu Gly His Gly 335 Thr Glu Leu Pro Phe Asp Pro Arg Gly Glu 160 His Gly Gly Ser Arg 240 Arg Asp Ser Tyr Ala 320 Leu 126 Gly Trp Ile Gly 385 Ser Met Phe Arg Asp 465 Glu Leu Val Leu His 545 Gly Ala Leu Ser Ser 355 Pro Phe 370 Asn Arg Leu Ala Leu Phe Thr Ser 435 Ile Ala 450 Pro Gin Pro Glu Ile Ala Asp Ala 515 Arg Val 530 Gly Gly Leu His Val Lys 340 Phe Arg Arg Arg Ala Val Ala Ala 405 Met Gly 420 His Pro Glu Phe Asp Pro Arg Glu 485 Leu Arg 500 Asp Glu Thr Val Leu Val Leu Asp 565 Val Phe Gin Arg Gly 345 Glu Arg His His Gly 360 Leu Val Ala Phe Ala 375 Gly Asp Arg Met Ser 390 Ala Ala Leu Val Leu 410 Glu Glu TrpGly Ala 425 Glu Pro Glu Leu Gly 440 Ala Arg Met Gly Trp 455 Ala Thr Phe Ala Arg 470 Pro His Ala Gly Leu 490 Arg Glu Leu Pro Val 505 Ala Arg Gly Val Phe 520 Ala Leu Arg Pro Gly 535 Leu Ala Tyr Gly Glu 550 Gly Pro Gly Ala Ala 570 Trp Phe Arg Pro Gin Asp 380 Ala Gin 395 Leu Gly Arg Thr Glu Ala Asp Pro 460 Ser His 475.
Leu Ala Asp Ala Ala Phe Pro Val 540 Val Arg 555 Ile Val His Leu 365 His Val Pro Pro Thr 445 Ala Leu Phe Pro Ser 525 Gly Ala Arg Asp 350 Asp Asp Gly Phe Trp 430 Ala Val Asp Tyr Ala 510 Arg Val Gly Leu Gly Thr Pro Asp Gin Val Glu Gly 400 Thr Pro 415 Gin Phe Arg Gly Val Pro Trp Ser 480 Thr Asp 495 Arg Glu Gly Pro Pro Glu Ala Ala 560 Glu 575 a a* (10)INFORMATION FOR SEQ ID (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:6 (B)TYPE:amino acid (D)TOPOLOGY:linear (ii)MOLECULE TYPE:peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID Trp Gly Tyr Asp Gly Val 1 (11)INFORMATION FOR SEQ ID NO:11: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:6 (B)TYPE:amino acid (D)TOPOLOGY:linear (ii)MOLECULE TYPE:peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:11: Asp Val Val Tyr Asn His 1 (12)INFORMATION FOR SEQ ID NO:12: 127 (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 7 (B)TYPE: amino acid (D )TQPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:l2: Arg Leu Asp Ala Val His Ala 1 (13)INFORMATION FOR SEQ ID NO:13: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH:7 (B)TYPE:amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:13: Ile Ala Glu Ser Asp Leu Asn 1 (14)INFORMVATION FOR SEQ ID NO:14: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B)TYPE:amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v )FRAGMENT TYPE: N-terminal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:14: Met Asn Arg Arg Phe Pro Val Trp Ala Pro Gln Ala Ala Gln Val Thr 1 5 10 1 Leu Val Val Gly FOR SEQ ID (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE: amino acid (D )TOPOLOGY: linear (ii )MOLECULE TYPE: peptide (v)FRAGMENT TYPE:internal fragment (xi )SEQUENCE DESCRIPTION:SEQ ID NO: Ser Arg Ala Ala His Gly Tyr Gly Leu Asp Ala Gln Trp Asp Asp Asp 1 5 10 Val His His Ala (16)INFORMATION FOR SEQ ID NO:16: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE:amino acid (D )TOPOLOGY: linear .128- (ii)MOLECULE TYPE:peptide (v)FRAGMENT TYPE:internal fragment (xi)SEQUENCE DESCRIPTION:SEQ ID NO:16: Asp Glu Asn Gly Trp Trp Ala Leu Gin Gin Pro Trp Asp Gly Gly Pro 1 5 10 Asp Leu Val Asp (17)INFORMATION FOR SEQ ID NO:17: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:1725 (B)TYPE:nucleic acid (C)strandedness:double (D)TOPOLOGY:linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:17: 9* *r .9 9*.
ATGAACCGAC GATTCCCGGT CAAGGCCGCG CCGAACTCCC CCGTGGGACG GCGGCCCCGA TTCGCCGACC CGCGGTCGCT GACCCCGCCC GCTACGCGTG GTGATCTACG AACTGCACGT CGTCGCCTCG ACCACCTGGT GCGTTCAACG GCACCCACGG CCCTACGGCG GCCCGGAGGC GCCGTCGTGC AGGACGTCGT TTCGGCCCCT ACCTCGGGTC GGGCCGCTCT CCGACGAGGT GACATGCACG CCGACGGGCT CTGCACCTGC TCGAAGAGCT CCGCTGACGC TCATCGCCGA GCGCACGGCT ACGGCCTCGA AACGTGACCG GCGAGACCGT AAGGTGTTCC AGCGCGGCTG CACGGCCGGC CGCTCGACCC CACGACCAGG TCGGCAACCG TCGCTCGCCG CCGCGGCGGC GGCGAGGAGT GGGGCGCGCG CTGGGGGAGG CGACGGCGCG GCAGTCGTGC CCGACCCGCA GAGCCCGAGC GGGAACCGCA CGGCGCGAGC TGCCGGTCGA GTCTTCGCGT TCAGCCGCGG GGGGTGCCCG AGCACGGGGG GGACTGCACC TCGACGGGCC
CTGGGCGCCC
GCTGACCCGC
CCTCGTCGAC
GCGGCAGCCG
GGGCGACGAC
CGGCACCTTC
GCGCCTCGGC
CTGGGGCTAC
GTACCAGCGC
CTACAACCAC
GGGCGCCGCC
GCGGCGGTAC
GCGGCTCGAC
CGCCGCCCGC
GAGCGACCTG
CGCCCAGTGG
CGGCTACTAC
GTTCCACGAC
CGACATCCCG
AGCGGTCGGC
GCTCGTGCTG
CACCCCGTGG
CGGGCGCATC
GGACCCGGCC
CGCGGGCCTG
TGCGCCGGCG
CCCGCTGCGG
CCTCGTGCTC
CAGGCCGCGC
GACGAGAACG
TACGGCTACC
CGCGGCGTGC
GGATGGCGCG
ACCCCTGAGG
GTCGACGCGG
GACGGGGTGC
TTCGTCGACG
CTGGGCCCGA
AACACCTGGG
ATCATCGACA
GCCGTGCACG
GTCGACGAGC
AACGACCCGA
GACGACGACG
GCCGACTTCG
GGCACCTGGT
TTCCGCCGGC
GACCGCATGT
CTCGGCCCGT
CAGTTCTTCA
GCCGAGTTCG
ACCTTCGCCC
CTCGCCTTCT
CGCGAGGTGG
GTCACGGTCG
GCCTACGGCG
GATGGTGGGC
TCGTCGACGG
ACGAGCTCGG
GCCGAGACCT
GAACGCTGGA
TCGAGCTGCT
TCTGGTACGC
CCTGCCACGC
GCGGCAACCA
GCGACGCGCT
ACGCGGTGTA
CGCTGCGCGA
TGGCGGGCGA
AGCTGATCCG
TGCACCACGC
GCGGGCTCGG
CGAGCTTCCG
TCGTCGCCTT
CGGCGCAGGT
TCACCCCGAT
CCTCCCACCC
CCCGCATGGG
GCTCGCACCT
ACACCGACCT
ATGCCGACGA
CGCTGCGCCC
AGGTGCGCGC
TCTTCAGCAG
CAAGGGCCCC
CCGCGAATTC
CACCGGAGCC
CAGCGCCATC
GCCCGTCAAC
GGTGCACGAG
CCGCGGCCTC
CCTGCCCGAC
GAACCTCGAC
CTGGCTGCGC
CGCCCGCGCG
GCTCGGCCGG
CTCCCGCGCG
GGTGCACGCC
CGCCCTCGTC
CGAGCGGCAC
CGCGCAGGAT
CGGCGAGGGT
GCTGTTCATG
CGAGCCCGAG
CTGGGACCCG
GGACTGGTCC
GATCGCGCTG
GGCGCGCGGC
CGGACCGGTC
CGGCGCCGCC
AGGTGACGCT CGTCGTGGGC 120 180 240 300 360 420 480 540 600 660 720 780 840 900 960 1020 1080 1140 1200 1260 1320 1380 1440 1500 1560 1620 1680 9 9 9 GGGAGCCGCG ATCGTGCGCC TCGAG 1725 (18)INFORMATION FOR SEQ ID NO:18: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:23 (B)TYPE:nucleic acid (C)strandedness single (D)TOPOLOGY:linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:18: GCSAACCGST GGTGGTGGGA CGT (19)INFORMATION FOR SEQ ID NO:19: (i )SEQUENCE CHARACTERISTICS: (A )LENGTH :3252 (B )TYPE nucleic acid (C )strandedness double (D )T0POLOGY: linear (ii )MOLECULE TYPE:genomic DNA (vi )ORIGINAL SOURCE: (A )ORGANISM: Arthrobacter sp.
(B)INDIVIDUAL ISOLATE:S34 (FERN BP-6450) (ix )FEATURE: (A)NAME/KEY: (B)LOCATION:1. .742 IDENTIFICATION METHOD: E (A)NAME/KEY:mat peptide (B)LOCATION:743. .3013 (C)IDENTIFICATION METHOD:E (xi)SEQUENCE DESCRIPTION:SEQ ID NO:19:
ATGCCGACGA
GCGCCCAGTG
CGCCCCTGAT
ACACCTTTGA
CGGGCGCTCT
CTGCGCCCTG
AACCCGCCGA
AGCGCGACGG
CAGCTGCGGG
CAGGCGAGGA
CCATCACGGC
CCCGTGGACG
GCACCTGCGT
CGAACTTGAG
CCACGACGAG
TGCTGGCGAA
ACGACACGGT
CGGCCGCCTC
CCGCGCGCAG
CGACGAGGCG
CCGCGGCCAG
TGGCGCCGAC
ACACGGCGGC
ACGCTAGCGC
GCGCGTACCG
AGATTCGGCC
9*
CGCGTTCTCG
CACGATCGCG
GGTGAGCACG
GAACGCGTAC
GACCTGACGC
CACCGCCTTG
CAGCACGGCC
CACCACCACG
CGCGACGACG
GAACAGGGCG
CATTGCTCAC
GCGTGTGACC
TC GTG CCC Met Pro 1 TTC GAC eu Phe Asp NC TGG CTG sp Trp Leu
GGCACCCGCG
GCGAGCGCCG
ATGAAGACCA
CAATCGGAGA
CGGAAGGCAG
CGCAGCCAGC
AGCGGCAGCA
GCGACGGCGG
ATCGTGGTCG
ACGGCGGTCA
AGGAAGGGCC,
GATCGTGTCA
AGAGCGGTCC
CGACGACGGC
CCTCGAGGCC
CCCCGAACCG
CCTCCTCGTC,
CGAGCCCGAA
GCAGGATCGC
CACCTGTCAG
CCTCCACCGC
TCGGCCCAGC
AAGACGCCCG
ACCGGTGGCG
GCGCACGGCG
GACCGGCAGG
CTCGAGCAAC
GCTCTCGCGC
ACGGAGAGCC
GACGAGCAGC
GGGACCGACG
CGCCGACCGC
CTCGACCACG
AGACGGTTGA
CAACGCGGCA
CCCGCCCCGA
GCC AGT ACC TAC CGC CTT CAG ATC Ala Ser Thr Tyr Arg Leu Gin Ile TCG GCG GAG TTC Ser Ala Glu Phe
ACC
Thr 15
GCC
Ala a CAC CGC CTC His Arg Leu
GGC,
Gly
TCC
Ser GAG TCG Glu Ser GAC GCC Asp Ala 60 GCG CAC Ala His
GGC
Gly 45
GCC
Ala TCG CAC GGC Ser His Gly
TAC
Tyr 50
GAG
Glu 3CG GCG Ala Ala 20 rAC CTC Tyr Leu 35 3AC GTG Asp Val 3GG CTC Gliy Leu CGC ATC GTG CCC Arg Ile Val Pro TCG CCG CTG CTC Ser Pro Leu Leu GTC GAC CAC TCC Val Asp His Ser GCC GAG CTC TCC Ala Glu Leu Ser GAC ATC GTG CCC A so Ile Val Pro CGC GGC GGG Arg Gly Gly GAG CGC GGC Glu Arg Gly
GTC
Val
ATG
Met 80
CCG
Pro
CCG
Pro 65
GGC
Gly
AAG
Lys TAC CTG Tyr Leu GAG TCC Glu Ser CGC GTC Arg Val CGT GCG Arg Ala AAC CAC Asn His GTT CTG Val Leu 105 GAC TGG Asp Trp
GGC
Gly GTC GCG Val Ala
ACG
Thr
CGG
Arg 120 180 240 300 360 420 480 540 600 660 720 772 820 868 916 964 1012 1060 1108 GTC GTC GTC Val Val Val GCG AAC CGC Ala Asn Arg 100 TAC GCC GAC Tyr Ala Asp 115
TGG
Trp TGG TGG GAC Trp Trp Asp GCC CGT GGA Ala Arg Gly
GAG
Gin 110 TCG GAG Ser Glu TAC, TTC Tyr Phe GAC ATC Asp Ile 120 130 GAG TTC GGC GGC Glu Phe Gly Gly 125 GAC GAG CTC GAC Asp Glu Leu Asp 140 GAG CAC CGC TTC Glu His Arg Phe 155 GAG GTG CAC GAC Glu Val His Asp GAC CAC GAC CTC Asp His Asp Leu 190 GCC GTA CGC GTC Ala Val Arg Val 205 ATC GGC CGC TGG Ile Gly Arg Trp 220 CAC CCC His Pro GAC GGG Asp Gly
S..
235
GAG
Glu
GAC
Asp
GAC
Asp
CAT
His
TGG
Trp 315
CTG
Leu CTC GCC CAA Leu Ala Gin GAG CGG ATG Glu Arg Met 270 GCG CTG GCC Ala Leu Ala 285 CCG CTC ACC Pro Leu Thr 300 GCC GAG CTG Ala Glu Leu AAC TCC GAG Asn Ser Glu GGC AGG CTG CGC CTG CCC GTG CTC GGC GAC GGC CCC Gly Arg Leu Arg Leu Pro Val Leu Gly Asp Gly Pro 130 135 GCG CTG AGA GTG GAT GGC GAC GAG CTC GTC TAC TAC Ala Leu Arg Val Asp Gly Asp Glu Leu Val Tyr Tyr 145 150 CCG ATC GCC GAG GGC ACC GGC GGC GGC ACC CCG CGC Pro Ile Ala Glu Gly Thr Gly Gly Gly Thr Pro Arg 160 165 170 CGG CAG CAC TAC GAG CTG ATG TCG TGG CGG CGG GCC Arg Gin His Tyr Glu Leu Met Ser Trp Arg Arg Ala 175 180 185 AAC TAC CGC CGC TTC TTC GCC GTG AAC ACG CTC GCC Asn Tyr Arg Arg Phe Phe Ala Val Asn Thr Leu Ala 195 200 GAA GAC CCG CGC GTG TTC GAC GAC ACC CAC CGC GAG Glu Asp Pro Arg Val Phe Asp Asp Thr His Arg Glu 210 215 ATC GCC GAG GGC CTC GTC GAC GGC CTG CGC GTC GAC Ile Ala Glu Gly Leu Val Asp Gly Leu Arg Val Asp 225 230 CTG CGC GCC CCC GGC GAC TAC CTG CGC CGT CTC GCC Leu Arg Ala Pro Gly Asp Tyr Leu Arg Arg Leu Ala 240 245 250 GGC AGG CCG ATC TGG GTC GAG AAG ATC ATC GAG GGC Gly Arg Pro Ile Trp Val Glu Lys Ile Ile Glu Gly 255 260 265 CCC CCG CAG TGG CCC ATC GCC GGC ACC ACC GGC TAC Pro Pro Gin Trp Pro Ile Ala Gly Thr Thr Gly Tyr 275 280 GGG ATC GAC CGG GTG CTC GTC GAC CCC GCG GGC GAG Gly Ile Asp Arg Val Leu Val Asp Pro Ala Gly Glu 290 295 CAG ATC GTC GAC GAG GCG GCA GGC AGC CCC CGG CGC Gin Ile Val Asp Glu Ala Ala Gly Ser Pro Arg Arg 305 310 GTT CCC GAG CGC AAG CGG GCC GTC GCC CGC GGC ATC Val Pro Glu Arg Lys Arg Ala Val Ala Arg Gly lie 320 325 330 ATC CGC CGC GTC GCC CGC GAA CTC GGA GAG GTC GCC Ile Arg Arg Val Ala Arg Glu Leu Gly Glu Val Ala 335 340 345 GAC GCG CTC GTC GAG ATC GCC GCC GCC CTG TCC GTC Asp Ala Leu Val Glu Ile Ala Ala Ala Leu Ser Val 355 360 CTG CCG TTC GGG CGC GAG CAC CTC GAC GAA GCC GTG Leu Pro Phe Gly Arg Glu His Leu Asp Glu Ala Val 370 -375 GCC GCA GCC CCC CAG CTC GAG GCC GAC CTC GCC GCC Ala Ala Ala Pro Gin Leu Glu Ala Asp Leu Ala Ala 385 390 CTC GCC GAC CCG GGC AAC CCC GCC GCG CTC CGC TTC Leu Ala Asp Pro Gly Asn Pro Ala Ala Leu Arg Phe 400 405 410 1156 1204 1252 1300 1348 1396 1444 1492 1540 1588 1636 1684 1732 1780 1828 1876 1924 1972 2020
S
r C GGC GAC GTC GAA Gly Asp Val Glu 350 TAC CGC AGC TAC Tyr Arg Ser Tyr 365 GCC GCC GCG CAG Ala Ala Ala Gin 380 GTC GGC GCA GCG Val Gly Ala Ala 395 CAG CAG ACC AGC GGC ATG ATC ATG GCC AAG GGC GTC GAG GAC AAC GCG Gin Gin Thr Ser Gly Met Ile Met Ala Lys Gly Val Glu Asp Asn Ala 415 420 425 TTC TAC CGC TAC CCC CGG CTC ACC TCG CTG ACC GAG GTC GGG GGA GAC 2068 Phe Tyr Arg Tyr Pro Arg Leu Thr Ser Leu Thr Glu Val Gly Gly Asp 430 435 440 CCG AGC CTG TTC GCG ATC GAC GCG GCC GCC TTC CAC GCG GCG CAG CGC 2116 Pro Ser Leu Phe Ala Ile Asp Ala Ala Ala Phe His Ala Ala Gin Arg 445 450 455 GAC CGC GCC GCC CGG CTG CCC GAG TCG ATG ACG ACG CTG ACC ACC CAC 2164 Asp Arg Ala Ala Arg Leu Pro Glu Ser Met Thr Thr Leu Thr Thr His 460 465 470 GAC ACC AAG CGC AGC GAA GAC ACC CGG GCG CGG ATC ACC GCG CTC GCC 2212 Asp Thr Lys Arg Ser Glu Asp Thr Arg Ala Arg Ile Thr Ala Leu Ala 475 480 485 490 GAG GCC CCC GAA CGC TGG CGG CGC TTC CTG ACC GAG GTC GGC GGG CTC 2260 Glu Ala Pro Glu Arg Trp Arg Arg Phe Leu Thr Glu Val Gly Gly Leu 495 500 505 ATC GGA ACG GGC GAC CGG GTG CTG GAG AAC CTG ATC TGG CAG GCG ATC 2308 Ile Gly Thr Gly Asp Arg Val Leu Glu Asn Leu Ile Trp Gin Ala Ile 510 515 520 GTC GGC GCG TGG CCG GCG AGC CGG GAG CGG CTC GAG GCC TAC GCG CTG 2356 Val Gly Ala Trp Pro Ala Ser Arg Glu Arg Leu Glu Ala Tyr Ala Leu 525 530 535 AAG GCC GCG CGC GAA GCC GGC GAG TCG ACC GAC TGG ATC GAC GGC GAC 2404 Lys Ala Ala Arg Glu Ala Gly Glu Ser Thr Asp Trp Ile Asp Gly Asp 540 545 550 CCC GCG TTC GAA GAG CGG CTG ACC CGC CTG GTC ACG GTC GCC GTC GAG 2452 Pro Ala Phe Glu Glu Arg Leu Thr Arg Leu Val Thr Val Ala Val Glu 555 560 565 570 GAG CCG CTC GTG CAC GAG CTG CTC GAG CGG CTC GTC GAC GAG CTG ACG 2500 Glu Pro Leu Val His Glu Leu Leu Glu Arg Leu Val Asp Glu Leu Thr *GG575 580 585 SGCG GCC GGG TAC TCC AAC GGC CTC GCG GCG AAG CTG CTG CAG CTG CTC 2548 Ala Ala Gly Tyr Ser Asn Gly Leu Ala Ala Lys Leu Leu Gin Leu Leu 590 595 600 GCC CCC GGA ACC CCC GAC GTG TAC CAG GGC ACG GAA CGC TGG GAC CGG 2596 Ala Pro Gly Thr Pro Asp Val Tyr Gin Gly Thr Glu Arg Trp Asp Arg 605 610 615 TCG CTG GTG GAC CCG GAC AAC CGT CGC CCC GTG GAT TTC GCC GCG GCA 2644 Ser Leu Val Asp Pro Asp Asn Arg Arg Pro Val Asp Phe Ala Ala Ala S620 625 630 TCC GAG CTG CTC GAC CGC CTC GAC GGC GGC TGG CGG CCG CCC GTC GAC 2692 Ser Glu Leu Leu Asp Arg Leu Asp Gly Gly Trp' Arg Pro Pro Val Asp S635 640 645 650 GAG ACC GGC GCG GTC AAG ACG CTC GTC GTC TCC CGC GCG CTG CGG CTG 2740 Glu Thr Gly Ala Val Lys Thr Leu Val Val Ser Arg Ala Leu Arg Leu 655 660 665 CGC CGC GAC CGG CCC GAG CTG TTC ACC GCG TAC CAC CCG GTC ACG GCG 2788 Arg Arg Asp Arg Pro Glu Leu Phe Thr Ala Tyr His Pro Val Thr Ala 670 675 680 CGC GGC GCG CAG GCC GAG CAC CTG ATC GGC TTC GAC CGC GGC GGC GCG 2836 Arg Gly Ala Gin Ala Glu His Leu Ile Gly Phe Asp Arg Gly Gly Ala 685 690 695 ATC GCC CTG GCC ACC CGC CTG CCG CTC GGC CTC GCC GCC GCA GGC GGC 2884 Ile Ala Leu Ala Thr Arg Leu Pro Leu Gly Leu Ala Ala Ala Gly Gly 700 705 710 TGG GGC GAC ACG GTC GTC GAC GTC GGC GAG CGG AGC CTG CGC GAC GAG 2932 Trp Gly 715 CTG ACC Leu Thr GCC GAG Ala Asp Asp Thr Val Val Asp Val Gly Glu Arg 720 725 GGC CGC GAG GCC CGC GGA GCG GCG CGC Gly Arg Glu Ala Arg Gly Ala Ala Arg 735 740 TAG CCC GTC GCC CTG CTG GTG GAG ACA Tyr Pro Val Ala Leu Leu Val Glu Thr 750 755 Ser Leu Arg Asp Glu 730 GTG GCC GAG TTG TTC Val Ala Glu Leu Phe 2980
TGAACCGACG
AAGGCCGCGC
CGTGGGACGG
TCGCCGACCC
745 ATTCCCGGTC 3033 CGAACTCCCG 3093 CGGCCCCGAC 3153 GCGGTCGCTG 3213 3252 TGGGCGCCCC AGGCCGCGCA
CTGACCCGCG'ACGAGAACGG
CTCGTCGACT ACGGCTACCT CGGCAGCCGC GCGGCGTGCA GGTGACGCTC GTCGTGGGCC ATGGTGGGCT .CTTCAGCAGC CGTCGACGGC AAGGGCCCCT CGAGCTCGGC CGCGAATTC FOR SEQ ID (i )SEQUENCE CHARACTERISTICS: LENGTH:26 (B )TYPE :nucleic acid (C )strandedness :single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ iD ATGCCCGCCA GTACCTACCG CCTTCA (21)INFORMATION FOR SEQ ID NO:21: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE:nucleic acid strandedness :single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID S. .5
S
S
S. S S
S.
S
S
NO: 21:
S
TCATGTCTCC ACCAGCAGGG CGACG (22)INFORMvATION FOR SEQ ID NO:22: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: (B )TYPE:nucleic acid (C )strandedness: Single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:22: AATTCTTTTT TAATAAAATC AGGAGGAATC TAGATGTTTA CTAGTCTGCA (23)INFORMATION FOR SEQ ID NO:23: (i )SEQUENCE CHARACTERISTICS: A) LENGTH :42 (B )TYPE:nucleic acid (C )strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:23: GACTAGTAAA CATCTAGATT CCTCCTGATT TTATTAAAAA AG (24)INFORMATION FOR SEQ ID NO:24: (i )SEQUENCE CHARACTERISTICS: (A )LENGTH:33 (B )TYPE nucleic acid (C )strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:24: AAATCTAGAT GCCCGCCAGT ACCTACCGCC TTC 33 FOR SEQ ID (i )SEQUENCE CHARACTERISTICS: A) LENGTH :33 (B)TYPE:nucleic acid strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID AAAACTAGTT TATCATGTCT CCACCAGCAG GGC 33 (26)INFORMATION FOR SEQ ID NO:26: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 22 (B )TYPE:nucleic acid (C )strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:26: ATCGGTGATG TCGGCGATAT AG 22 (27)INFORMATION FOR SEQ ID NO:27: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:29 (B)TYPE:nucleic acid strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:27: GTACTGGCGG GCATATTTTT TCCTCCTGA 29 (28)INFORMATION FOR SEQ ID NO:28: (i)SEQUENCE CHARACTERISTICS: (A )LENGTH :31 (B )TYPE:nucleic acid strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:28: AATCAGGAGG AAAAAATATG CCCGCCAGTA C 31 (29)INFORMATION FOR SEQ ID NO:29: (i )SEQUENCE CHARACTERISTICS: (A )LENGTH :22 (B )TYPE :nucleic acid (C )strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:29: TCGACGATCT GGGTGAGCGG AT 22 FOR SEQ ID (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:22 (B)TYPE:nucleic acid (C)strandedness:single (D)TOPOLOGY:linear (xi)SEQUENCE DESCRIPTION:SEQ ID TCGACGAGCA CCCGGTCGAT CC 22 (31)INFORMATION FOR SEQ ID NO:31: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:26 (B)TYPE:nucleic acid (C)strandedness:single (D)TOPQLOGY:linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:31: CARTGGGAYG AYGAYGTNCA YCAYGC 26 (32)INFORMATION FOR SEQ ID NO:32: (i)SEQUENCE CHARACTERISTICS: (A)LENGTH:2218 (B)TYPE:nucleic acid (C)strandedness:double (D)TOPOLOGY:linear (ii)MOLECULE TYPE:genomic DNA (vi)ORIGINAL SOURCE: (A)ORGANISM:Arthrobacter sp.
(B)INDIVIDUAL ISOLATE:S34 (FERN BP-6450) (ix)FEATURE: (A)NAME/KEY:mat peptide (B)LOCATION:477..2201 (C)IDENTIFICATION
METHOD:E
44444... (A)NAME/KEY: 3S'UTR (B)LOCATION:222. .2218 (C)IDENTIFICATION
METHOD:E
(xi)SEQUENCE DESCRIPTION:SEQ ID NO:32: CTGCAGCTGC TCGCCCCCGG AACCCCCGAC GTGTACCAGG GCACGGAACG CTGGGACCGG TCGCTGGTGG ACCCGGACAA CCGTCGCCCC GTGGATTTCG CCGCGGCATC CGAGCTGCTC 120 GACCGCCTCG ACGGCGGCTG GCGGCCGCCC GTCGACGAGA CCGGCGCGGT CAAGACGCTC 180 GTCGTCTCCC GCGCGCTGCG GCTGCGCCGC GACCGGCCCG AGCTGTTCAC CGCGTACCAC 240 CCGGTCACGG CGCGCGGCGC GCAGGCCGAG CACCTGATCG GCTTCGACCG CGGCGGCGCG 300 ATCGCCCTGG CCACCCGCCT GCCGCTCGGC CTCGCCGCCG CAGGCGGCTG GGGCGACACG 360 GTCGTCGACG TCGGCGAGCG GAGCCTGCGC GACGAGCTGA CCGGCCGCGA GGCCCGCGGA 420 GCGGCGCGCG TGGCCGAGTT GTTCGCCGAC TACCCCGTCG CCCTGCTGGT GGAGAC ATG 479 Met 1 AAC CGA CGA TTC CCG GTC TGG GCG CCC CAG GCC GCG CAG GTG ACG CTC 527 Asn Arg Arg Phe Pro Val Trp Ala Pro Gin Ala Ala Gln Val Thr Leu 10 GTC GTG GGC CAA.GGC CGC GCC GAA CTC CCG CTG ACC CGC GAC GAG AAC 575 Val Val Gly Gln Gly Arg Ala Glu Leu Pro Leu Thr Arg Asp Glu Asn 25 GGA TGG TGG GGT CTT CAG CAG GGG TGG GAGC GGC GGC CCC GAC GTG GTC 623 Gly
GAG
Asp
TG
Ser ccc Pro
ACC
Thr
GGA
Gly
GGC
Gly 130
GAG
His
TAG
Tyr
GG
Arg
AGG
Ser
GGG
Ala 210
GAG
Giu
ATG
Met
GGG
Ala
GTG
Leu
GTG
Leu 290
GTG
Leu
GTG
Val *Trp Trp Ala TAG GGG TAG Tyr Gly Tyr GTG GGG CAG Leu Arg Gin GGC CGG TAG Ala Arg Tyr GGA GCC GTG Gly Ala Val 100 AGG CTG GAG Thr Leu Asp 115 GTG GAG GG Val Asp Ala GGG TGG GGG Gly Trp Gly GGG GGG CG Gly Gly Pro 165 GGG GTG GGG Gly Leu Ala 180 GGG AAG GAG Gly Asn His 195 AAG AGG TGG Asn Thr Trp GTG GGG GG Val Arg Arg GAG GGG GAG His Ala Asp 245 GG GGG GTG Arg Ala Leu 260 GGG GGG GAG Ala Gly Glu 275 AAG GAG CG Asn Asp Pro GAG GGG GAG Asp Ala Gin AGG GGG GAG Thr Gly Glu Leu
GTG
Leu
CG
Pro
GG
Ala
ATG
Ile
AGG
Ser
GTG
Val
TAG
Tyr 150
GAG
Giu
GTG
Vai
GTG
Leu
GGG
Gly
TAG
Tyr 230
GGG
Gly
GAG
His
GTG
Leu
AAG
Lys
TGG
Trp 310
ACC
Gln
GTG
Val 55
GG
Arg
TGG
Trp
TAG
Tyr
GGG
Ala
GAG
Glu 135
GAG
Asp
GG
Ala
GTG
Val
GGG
Pro
GAG
Asp 215
ATG
Ile
GTG
Leu
GTG
Leu
GGG
Gly
GTG
Leu 295
GAG
Asp
GTG
Gin 40
GAG
Asp
GGG
Gly
GGG
Gly
GAA
Giu
ATG
Ile 120
GTG
Leu
GGG
Giy
TAG
Tyr
GAG
Gin
GAG
Asp 200
GG
Ala
ATG
Ile
GG
Arg
GTG
Leu
GG
Arg 280
ATG
Ile
GAG
Asp
GGG
Pro
GGG
Gly
GTG
Val
GAG
Asp
GTG
Leu 105
GGT
Arg
GTG
Leu
GTG
Val
GAG
Gin
GAG
Asp 185
TTG
Phe
GTG
Leu
GAG
Asp
GTG
Leu
GAA
Glu 265
CG
Pro
GG
Arg
GAG
Asp Trp
AAG
Lys
GAG
His
GAG
Asp 90
GAG
His
GG
Arg
GGG
Pro
GTG
Leu
GG
Arg 170
GTG
Val
GGG
Gly
AAG
Asn
AAG
Asn
GAG
Asp 250
GAG
Giu
GTG
Leu
TGG
Ser
GTG
Val Asp
GGG
Gly
GAG
Giu 75
GGA
Gly
GTG
Val
GTG
Leu
GTG
Val
TGG
Trp 155
TTG
Phe
GTG
Val
GGG
Pro
GTG
Leu
GCG
Ala 235
GGG
Ala
GTG
Leu
AG
Thr
GG
Arg
GAG
His 315 Gly
GGG
Pro 60
GTG
Leu
TGG
Trp
GGG
Gly
GAG
Asp
AAG
Asn 140
TAG
Tyr
GTG
Val
TAG
Tyr
TAG
Tyr
GAG
Asp 220
GTG
Val
GTG
Val
GGG
Ala
GTG
Leu
GG
Ala 300
GAG
His
GAG
Gly
TTG
Phe
GGG
Gly
GG
Arg
AGG
Thr
GAG
His 125
GG
Ala
GG
Ala
GAG
Asp
AAG
Asn
GTG
Leu 205
GGG
Gly
TAG
Tyr
CAG
His
GGG
Ala
ATG
Ile 285
GG
Ala
GG
Ala
TTG
Pro
GGG
Ala
GG
Arg
GGG
Gly
TTG
Phe 110
GTG
Leu
TTG
Phe
GTG
Val
GGG
Ala
GAG
His 190
GGG
Gly
CG
Pro
TGG
Trp
GG
Ala
GG
Arg 270
GGG
Ala
GAG
His
GTG
Val
GGG
Asp
GAG
Asp
GAA
Glu
GGA
Arg
AGG
Thr
GTG
Val
AAG
Asn
GAG
His
TGC
Gys 175
GTG
Leu
TG
Ser
GTG
Leu
GTG
Leu
GTG
Leu 255
GTG
Val
GAG
Glu
GGG
Gly
GAG
His
GGG
Leu
CG
Pro
TTG
Phe
GAG
Asp
GGT
Pro
GG
Arg
GGG
Gly
GAG
Glu 160
GAG
His
GGG
Gly
GGG
Gly
TGG
Ser
GGC
Arg 240
GG
Arg
GAG
Asp
AGG
Ser
TAG
Tyr
GGG
Ala 320
GTG
Val
GG
Arg
GAG
Asp
GTG
Leu
GAG
Glu
GTG
Leu
AGG
Thr 145
GGG
Pro
GGG
Ala
CG
Pro
GGG
Ala
GAG
Asp 225
GAG
Asp
GAG
Asp
GAG
Glu
GAG
Asp
GGG
Gly 305
AAG
Asn
GGG
9. 9 .9 9* 9 9 9 9* .9 9 9999 *999 9.9.
9 9. 9.
99 .9 9 9 9 99*9 999999 9 671 719 767 815 863 911 959 1007 1055 1103 1151 1199 1247 1295 1343 1391 1439 1487 TAG TAG GGG Thr Val Gly Tyr Tyr Ala Asp Phe Gly Gly Leu Gly 136 GCC CTC Ala Leu TCG AGG Ser Ser 355 CCG TTG Pro Phe
GTC
Val 340
TTG
Phe
CGC
Arg 325 AAG GTG TTC Lys Val Phe CAG CGG Gin Arg 345 CAC CAC His His 330 GGG TGG TTC Gly Trp Phe GGC CGG CCG Gly Arg Pro
GGC
Arg
CGG
Arg GAG CGG Glu Arg CTC GTC Leu Val 375 GGG GAG Gly Asp CAC GAG His Asp 350 GTC GAG Leu Asp 365 360
GCG
Ala 335 GGG ACC TGG Gly Thr Trp CCC GAG ATG Pro Asp Ile TTG GCG Phe Ala 370
AAG
Asn GGA GGG GTG Arg Ala Val CGC ATG TCG Arg Met Ser CTC GCC GCC Leu Ala Ala
GCG
Ala 405
GGG
Gly 390
GCG
Ala GAG GAT Gln Asp 380 GCG GAG Ala Gin 395 CTC GGG Leu Gly CGC ACC Arg Thr GCG CTC GTG Ala Leu Val
GTG
Leu 410
GCG
Ala GTG GGG GAG Val Gly Glu CCG TTG ACC Pro Phe Thr 415 CCG TGG GAG Pro Trp Gin 430 ACG GGG CGC Thr Ala Arg CAC GAG His Asp GAG GTG Gin Val
GGG
Gly 385 GGT TCG Gly Ser 400 CCG ATG Pro Met TTG TTG Phe Phe GGG CGC Gly Arg GTG TTG Leu Phe ACC TCC Thr Ser 435 ATG GCC Ile Ala
ATG
Met 420
CAC
His GAG GAG TGG Glu Glu Trp
GGG
Gly 425
GTG
Leu CCC GAG CCC Pro Glu Pro
GAG
Glu 440
ATG
Met GGG GAG GCG Gly Glu Ala GAG TTG GCC Glu Phe Ala 450
CCG
Pro
CGC
Arg 455
ACC
Thr GGG TGG GAG Gly Trp Asp
CCG
Pro 460
CAC
His 445
GCA
Ala GTG GTG CCC Val Val Pro
GAG
Asp 465 1535 1583 1631 1679 1727 1775 1823 1871 1919 1967 2015 2063 2111 2159 2201 2218 GAG GAG CCG Asp Asp Pro
GCC
Ala 470
CCG
Pro TTG GGC CGC Phe Ala Arg
TCG
Ser 475
CTC
Leu GTG GAG TGG Leu Asp Trp CCC GAG CGG Pro Glu Arg*
S
S
55 S. S 5
S@@
S..
GAA
Glu 485
CGG
Arg CAC GGG GGG His Ala Gly
CTG
Leu 490
GTG
Val GCG TTG TAG Ala Phe Tyr
ACC
Thr 495
CGC
Arg TCC GAG Ser Glu 480 GAC CTG Asp Leu GAG GTG Glu Val ATG GCG Ile Ala GAT GCC Asp Ala 515 GGG GTG Arg Val
GTG
Leu 500 CGC GAG GTG Arg Glu Leu
CCG
Pro 505
GTG
Val GAT GCG Asp Ala GAG GAG GCG Asp Glu Ala ACG GTG GCG Thr Val Ala CTC GTG CTC Leu Val Leu 530
GGG
Gly
CGC
Arg
GTG
Leu 535
GCC
Ala
CCG
Pro
GGG
Gly 520
CGC
Arg
TAG
Tyr TTG GGG TTG Phe Ala Phe CCG GCG Pro Ala 510 AGC CGC Ser Arg 525 GGG GTG Gly Val CCC GGA CCG Pro Gly Pro
GTC
Val 540
CGC
Arg CCC GAG Pro Glu
CAC
His 545
GGA
Gly GGC CCG GTG Gly Pro Leu
GGG
Gly
GGG
Gly
S
S
GTG CAC CTC Leu His Leu
GAG
Asp 565 550
GGG
Gly GAG GTG Glu Val 555 GCG ATG Ala Ile 570 GCC GGG GCC Ala Gly Ala
GCC
Ala 560 GGA GCC Gly Ala GTG CGC CTC Val Arg Leu
GAG
Glu 575 TGACGCGGCT GGGTACC (33)INFORMATION FOR SEQ ID NO:33: (i)SEQUENGE
GHARAGTERISTIGS:
(B)TYPE:nucleic acid (C)strandedness:single (D)TOPOLOGY:linear (xi)SEQUENGE DESGRIPTION:SEQ ID NO:33: ATGAACCGAC GATTCCCGGT CTGGG (34)INFORMATION FOR SEQ ID NO:34: (i )SEQUENCE CHARACTERISTICS: (A )LENGTH (B )TYPE:nucleic acid strandedness: single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:34: TCACTCGAGG CGCACGATCG CGGCT FOR SEQ ID (i )SEQUENCE CHARACTERISTICS: (A )LENGTH :36 (B )TYPE:nucleic acid (C )strandedness :single (D )TOPOLOGY: linear (xi )SEQUENCE DESCRIPTION:SEQ ID NO: AAATCTAGAT GAACCGACGA TTCCCGGTCT GGGCGC 36 (36)INFORMATION FOR SEQ ID NO:36: (i )SEQUENCE CHARACTERISTICS: A) LENGTH :36 (B )TYPE: nucleic acid (C )strandedness :single (D )TOPOLOGY: linear (xi )SEQUENCE DESCRIPTION:SEQ ID NO: 36: AAAACTAGTT TATCACTCGA GGCGCACGAT CGCGGC 36 (37)INFORMATION FOR SEQ ID NO:37: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH:28 see*(B) TYPE: nucleic acid strandedness :single (D )TOPOLOGY: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:37: ATCGTCGGTT CATATTTTTT CCTCCTGA 28 0: (38)INFORMATION FOR SEQ ID NO:38: SEQUENCE CHARACTERISTICS: (A)LENGTH: 28 (B )TYPE:nucleic acid OCCS(C)strandedness: single sees(D )TOPOLOGY: linear sees*:(xi)SEQUENCE DESCRIPTION:SEQ ID NO:38: AATCAGGAGG AAAAAATATG AACCGACG 28 (39)INFORMATION FOR SEQ ID NO:39: (i )SEQUENCE CHARACTERISTICS: (A)LENGTH: 22 (B )TYPE:nucleic acid strandedness: single (D )TOPOLOGy: linear (xi)SEQUENCE DESCRIPTION:SEQ ID NO:39: AGGTGGTTGT AGACGACGTC CT 22 139

Claims (45)

1. A purified non-reducing saccharide-forming enzyme, which forms a non- reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysate, and which has an optimum temperature in the range of over 40 0 C but below 60 0 C.
2. The purified enzyme of Claim 1, which has an optimum pH in an acid pH range.
3. The purified enzyme of Claim 1 or Claim 2, which comprises a part or the whole of the amino acid sequence of SEQ ID NO: 1.
4. The purified enzyme of Claim 1, which comprises a part or the whole of the amino acid sequence of SEQ ID NO:2 or 3. The purified enzyme of Claim 1, which comprises a part or the whole of the amino acid sequences of SEQ ID NOs: 4 to 6.
6. The purified enzyme of any one of Claims 1 to 5, which is derived from a microorganism.
7. The purified enzyme of Claim 6, wherein said microorganism is one of the genus Arthrobacter.
8. The purified enzyme of Claim 7, wherein said microorganism is a member selected from the group consisting ofArthrobacter sp. S34, FERM BP-6450, and mutants thereof.
9. A purified non-reducing saccharide-forming enzyme obtainable from a microorganism selected from the group consisting of Arthrobacter sp. S34, FERM BP- o 6450, and mutants thereof capable of producing the enzyme of any one of Claims 1 to said enzyme forming a non-reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysate.
10. A purified non-reducing saccharide-forming enzyme obtainable by the expression of a DNA encoding the enzyme of any one of Claims 1 to 5, said enzyme forming a non-reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysate. 30 11. A purified non-reducing saccharide-forming enzyme, which comprises an amino acid sequence having at least 57% homology to the amino acid sequence of SEQ ID NO:1, and which forms a non-reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysate. 0 -140- 7 13/02/03,mcl 0828.claims,1
12. The purified non-reducing saccharide-forming enzyme of Claim 1, which has the following physicochemical properties: Action Forming a non-reducing saccharide having a trehalose structure as an end unit from a reducing partial starch hydrolysates having a degree of glucose polymerization of 3 or higher; Molecular Weight About 75,000±10,000 daltons on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE); 0 Isoelectric point (pI) About 4.5±0.5 on isoelectrophoresis using ampholyte; Optimum temperature About 50°C when incubated at pH 6.0 for 60 min; Optimum pH About 6.0 when incubated at 50 0 C for 60 min; Thermal stability Stable up to a temperature of about 55°C when incubated at pH 7.0 for min; and pH Stability '0 Stable at pHs of about 5.0 to about 10.0 when incubated at 4 0 C for 24 hours. S..
13. An isolated DNA encoding the enzyme of Claim 1.
14. The isolated DNA of Claim 13, which comprises a part or the whole of the nucleotide sequence of SEQ ID NO:7 or its complementary nucleotide sequence.
15. The isolated DNA of Claim 13, which comprises a part or the whole of the nucleotide sequence of SEQ ID NO:8.
16. The isolated DNA of Claim 13, wherein one or more bases are replaced with another bases based on the degeneracy of genetic code without altering the amino acid sequence encoded thereby.
17. The isolated DNA of any one of Claims 13 to 16, which has been inserted into an autonomously-replicable vector.
18. The isolated DNA of any one of Claims 13 to 17, which has been introduced into an appropriate host. 141 13/02/03,mel 0828.claims,141
19. A process for producing a non-reducing saccharide-forming enzyme, which comprises the steps of: culturing a microorganism, capable of forming the enzyme of Claim 1, in a nutrient culture medium to form said enzyme; and collecting the formed enzyme from the resulting culture. The process of Claim 19, wherein said microorganism is one of the genus Arthrobacter.
21. The process of Claim 20, wherein said enzyme is obtainable from a microorganism selected from the group consisting of Arthrobacter sp. S34, FERM BP- 6450, and mutants thereof capable of producing the enzyme of Claim 1.
22. The process of Claim 19, wherein said microorganism is a transformant which has been prepared by introducing into an appropriate host a DNA which encodes the enzyme of Claim 1.
23. The process of Claim 19, which comprises the steps of: treating the resulting culture with a cell-lysis enzyme; and collecting the non-reducing saccharide-forming enzyme from the treated culture.
24. The process of Claim 19, wherein the produced non-reducing saccharide- forming enzyme is collected by one or more techniques selected from the group consisting of dialysis, salting out, filtration, concentration, separatory sedimentation, gel filtration chromatography, ion-exchange chromatography, hydrophobic chromatography, reverse- phase chromatography, affinity chromatography, gel electrophoresis, and isoelectrofocusing.
25. A purified trehalose-releasing enzyme, which specifically hydrolyses a non- reducing saccharide having a trehalose structure as an end unit at a site between a part of 25 the trehalose structure and a part of the resting, and which has an optimum temperature in the range of over 45 0 C but below 60 0 C.
26. The purified enzyme of Claim 25, which has an optimum pH in an acid pH range.
27. The purified enzyme of Claim 25, which comprises a part or the whole of the amino acid sequence of SEQ ID NO:9.
28. The purified enzyme of Claim 25, which comprises a part or the whole of the amino acid sequences of SEQ ID NOs:10 to 13. .29. The purified enzyme of Claim 25, which comprises a part or the whole of the amino acid sequences of SEQ ID NOs: 14 to 16. S- 142 S13/02/03,mcl 0828.claims,142 The purified enzyme of Claim 25, which is derived from a microorganism.
31. The purified enzyme of Claim 30, wherein said microorganism is one of the genus Arthrobacter.
32. The purified enzyme of Claim 31, wherein said microorganism is a microorganism selected from the group consisting of Arthrobacter sp. S34, FERM BP- 6450, and mutants thereof.
33. A purified trehalose-releasing enzyme obtainable from a microorganism selected from the group consisting of Arthrobacter sp. S34, FERM BP-6450, and mutants thereof capable of producing the enzyme of Claim 25, said enzyme specifically hydrolysing a non-reducing saccharide having a trehalose structure as an end unit at a site between a part of the trehalose structure and a part of the resting.
34. A purified trehalose-releasing enzyme obtainable by the expression of a DNA encoding the enzyme of Claim 25, said enzyme specifically hydrolysing a non- reducing saccharide having a trehalose structure as an end unit at a site between a part of the trehalose structure and a part of the resting. A purified trehalose-releasing enzyme which comprises an amino acid sequence having at least 60% homology to the amino acid sequence of SEQ ID NO:9, and specifically hydrolyses a non-reducing saccharide having a trehalose structure as an end unit at a site between a part of the trehalose structure and a part of the resting.
36. The purified trehalose-releasing enzyme of Claim 25, which has the following physicochemical properties: Action Specifically hydrolysing a non-reducing saccharide having a trehalose structure as an end unit at a site between a part of the trehalose structure and a part of the 25 resting; Molecular weight About 62,000+5,000 daltons on sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE); Isoelectric point (pI) S 30 About 4.7±0.5 on isoelectrophoresis using ampholyte; Optimum temperature About 50 0 C to about 55°C when incubated at pH 6.0 for 30 min; Optimum pH o 143- 13/02/03,mcl 0828.claims, 43 About 6.0 when incubated at 50 0 C for 30 min; Thermal stability Stable up to a temperature of about 50 0 C when incubated at pH 7.0 for min; and pH Stability Stable at pHs of about 4.5 to about 10.0 when incubated at 4 0 C for 24 hours.
37. An isolated DNA encoding the enzyme of Claim
38. The isolated DNA of Claim 37, which comprises a part or the whole of the nucleotide sequence of SEQ ID NO: 17 or its complementary nucleotide sequence.
39. The isolated DNA of Claim 38, which comprises a part or the whole of the nucleotide sequence of SEQ ID NO:8. The isolated DNA of Claim 37, wherein one or more bases are replaced with another bases based on the degeneracy of genetic code without altering the amino acid sequence encoded thereby.
41. The DNA of Claim 13, which has been inserted into an autonomously- replicable vector.
42. The DNA of Claim 37, which has been introduced into an appropriate host.
43. A process for producing a trehalose-releasing enzyme, which comprises the steps of: culturing a microorganism, capable of forming the enzyme of Claim 25, in a nutrient culture medium to produce said enzyme; and collecting the produced enzyme from the resulting culture. S44. The process of Claim 43, wherein said microorganism is one of the genus 25 Arthrobacter.
45. The process of Claim 44, wherein said enzyme is obtainable from a microorganism selected from the group consisting ofArthrobacter sp. S34, FERM BP- 6450, and mutants thereof capable of producing the enzyme of Claim
46. The process of Claim 43, wherein said microorganism is a transformant 30 which has been obtained by introducing into an appropriate host a DNA which encodes the enzyme of Claim 0 00 rlu -144- A 13/02/03,mcl 0828.claims,144
47. The process of Claim 43, which comprises the steps of treating the resulting culture with a cell-lysis enzyme, and collecting the trehalose-releasing enzyme from the treated culture.
48. The process of Claim 43, wherein the produced trehalose-releasing enzyme is collected by one or more techniques of dialysis, salting out, filtration, concentration, separatory sedimentation, gel filtration chromatography, ion-exchange chromatography, hydrophobic chromatography, reverse-phase chromatography, affinity chromatography, gel electrophoresis, and isoelectrofocusing.
49. A microorganism selected from the group consisting ofArthrobacter sp. S34, FERM BP-6450, and mutants thereof. A process for producing a saccharide, which comprises the steps of: subjecting a reducing partial starch hydrolysate to the action of the enzyme of Claim 1 and/or the enzyme of Claim 25 to form a non-reducing saccharide; and collecting the produced non-reducing saccharide or a saccharide composition comprising said non-reducing saccharide from the resulting culture.
51. The process of Claim 50, wherein said reducing partial starch hydrolysate is one having a glucose polymerization degree of 3 or higher and being obtainable by subjecting starch or amylaceous substance to the action of an acid and/or a starch hydrolase.
52. The process of Claim 50, wherein one or more enzymes selected from the group consisting of o-amylase, P-amylase, glucoamylase, starch-debranching enzyme, cyclomaltodextrin glucanotransferase, and a-glucosidase are further allowed to act on the reducing partial starch hydrolysate in the step of forming the non-reducing saccharide.
53. The process of Claim 50, wherein said non-reducing saccharide is a member 25 selected from the group consisting of trehalose, a-glucosyltrehalose, a-maltosyltrehalose, a-maltotriosyltrehalose, a-maltotetraosyltrehalose, and ac-maltopentaosyltrehalose.
54. The process of Claim 53, wherein said trehalose is in the form of a hydrous- or anhydrous-crystal. -145- 13/02/03,mcl 0828.claims,l *o o* *o oooo oo The purified enzyme of Claim 1, the isolated DNA of Claim 13 or the process of Claim 19 substantially as hereinbefore described in any one of the Examples and/or drawings. DATED this 13 t1h day of February, 2003 KABUSHIKI KAISHA HAYASHTLBARA SEIBUTSU KAGAKII KENKYUJO By Their Patent Attorneys: CALLINAN LAWRIE 130/3m I.88cais 4
AU47533/99A 1998-09-11 1999-09-10 Non-reducing saccharide-forming enzyme, trehalose-releasing enzyme, and process for producing saccharides using the same enzymes Ceased AU760216B2 (en)

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Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0671470A2 (en) * 1994-03-07 1995-09-13 Kabushiki Kaisha Hayashibara Seibutsu Kagaku Kenkyujo Trehalose releasing enzyme, DNA encoding therefor, their preparation and uses
EP0674005A2 (en) * 1994-02-23 1995-09-27 Kabushiki Kaisha Hayashibara Seibutsu Kagaku Kenkyujo Non-reducing saccharide-forming enzyme, DNA encoding it, and their preparations and uses

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0674005A2 (en) * 1994-02-23 1995-09-27 Kabushiki Kaisha Hayashibara Seibutsu Kagaku Kenkyujo Non-reducing saccharide-forming enzyme, DNA encoding it, and their preparations and uses
EP0671470A2 (en) * 1994-03-07 1995-09-13 Kabushiki Kaisha Hayashibara Seibutsu Kagaku Kenkyujo Trehalose releasing enzyme, DNA encoding therefor, their preparation and uses

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