AU746419B2 - Analytical disc with optically trackable encoded information and related optical inspection system - Google Patents

Analytical disc with optically trackable encoded information and related optical inspection system Download PDF

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AU746419B2
AU746419B2 AU59349/99A AU5934999A AU746419B2 AU 746419 B2 AU746419 B2 AU 746419B2 AU 59349/99 A AU59349/99 A AU 59349/99A AU 5934999 A AU5934999 A AU 5934999A AU 746419 B2 AU746419 B2 AU 746419B2
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disc
sample
encoded information
radiation
optical inspection
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John Francis Gordon
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Nagaoka Co Ltd
Burstein Technologies Inc
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University of Glasgow
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Description

Analytical Disc with Optically Trackable Encoded Information and Related Optical Inspection System The present invention relates to apparatus, to a system, and to a method for carrying out optical analysis of samples and is applicable in particular to the analysis of biological, chemical and biochemical samples.
Many chemical, biochemical and biological assays rely upon inducing a change in the optical properties of a biological sample being tested. For example, in order to test for the presence of an antibody in a blood sample, possibly indicating a viral infection, an enzyme-linked immunosorbent assay (ELISA) can be carried out which produces a visible coloured deposit if the antibody is present. An ELISA makes use of a surface which is coated with an antigen specific to the antibody to be tested for. Upon exposure of the surface to the blood sample, antibodies in the sample bind to the antigens. Subsequent staining of the surface with specific enzyme-conjugated antibodies and reaction of the enzyme with a substrate produces a precipitate which shows up the level of antigen binding and hence allows the presence of antibodies in the sample to be identified. This identification is usually carried out using a light microscope which allows an area of the substrate to be viewed by an operator.
S In addition to colour staining using an ELISA, techniques such as fluorescence and gold labelling can be used to alter the optical properties of biological antigen material. Similar techniques are also used in general histology to visualise specific .ooeoi areas of tissue, e.g. particular cell types or cell structures, as well as in cell culture.
oooeo A significant disadvantage of existing optical analysis techniques is that they are open to human error because of their subjective nature. These techniques are also not suited to uses where a high throughput of samples is required, for example in blood screening applications or cervical smear tests, and are thus relatively expensive to use. The cost factor is exacerbated because, more often than not, different equipment is required for each particular technique.
An object of the present invention is to provide a technique for carrying out the optical analysis of samples which overcomes or at least mitigates certain of these disadvantages.
It is also an object of the present invention to provide an optical analysis technique which allows high speed automatic analysis of biological, biochemical and chemical samples and which is versatile enough to allow it to be used for a variety of different studies.
These objects might be achieved by adapting the technology which has been developed in the field of audio and video compact discs to scan surfaces, to which a sample has been attached, using a light beam which is substantially focused onto that surface. A detector is arranged to detect light reflected from, or transmitted through that surface, and to determine from analysis of the detected light whether the light 15 beam has been interfered with by the sample material.
According to a first aspect of the present invention there is provided a disc for use in conducting an optical inspection of a biological, chemical or biochemical sample, said disc comprising: 20 a substrate having a surface including a centre portion and a perimeter portion; o•.
optically trackable encoded information located on said surface, said encoded information being located in both said centre portion and said perimeter portion of said substrate surface; and a sample support surface for supporting said biological, chemical or biochemical sample for optical inspection wherein said sample support surface is internal to the disc.
According to a second aspect of the present invention there is provided a system for conducting optical inspection of a biological, chemical or biochemical sample comprising: a disc according to claim 1; and an optical inspection system including: a radiation source for providing at least one beam of electromagnetic radiation; a detection system including one or more detectors for detecting radiation reflected from and/or transmitted through said disc and tracking optics which provide tracking of said beam of radiation on said optically trackable encoded information.
According to a third aspect of the present invention there is provided a method of conducting an optical inspection of a biological, chemical or biochemical sample, said method comprising the steps of: providing a disc according to claim 8; and optical inspection of the material attached to said sample support surface, said optical inspection including the steps of: tracking a beam of radiation along the optically 15 trackable encoded information to produce detectable radiation which is reflected from i and/or transmitted through said disc; and measuring said detectable radiation to detect the presence of said material on said sample support surface.
20 According to a fourth aspect of the present invention there is provided a method of conducting an optical inspection of a biological, chemical or biochemical sample employing the disc of claim 1 to be read by an optical reader, comprising the steps of providing a sample in association with said disc; S•conducting an optical inspection of said sample using a beam of radiation a..
which has been passed through a quarter wave plate and said optical reader; and reading encoded optically readable position and tracking information provided within said disc by said reader and using said information in conducting said inspection of said sample.
The present invention enables the rapid scanning of a surface coated with components from a sample to determine their presence and also if necessary their optical properties. The system is particularly suited for carrying out the automatic inspection of samples with a high throughput. Moreover, provision of address information in or on the substrate enables the precise position of the electromagnetic radiation beam on the surface to be determined which in turn allows the accurate mapping of optical data, corresponding to attached material, to the surface. This enables regions of interest on the surface to be easily and quickly re-located.
The present invention is suited to carrying out ELISA where the specific antigen is coated onto the surface of the substrate. The surface is then exposed to the analyte and subsequently the specific enzyme and the resulting sample scanned to detect and quantify the enzyme linked to the surface. The system is also suited to carrying out histological analysis and to the quantitative study of gels run using electrophoresis.
In a preferred embodiment of the present invention control means is arranged S 15 to determine the difference between output signals provided by first and second .detectors, which are representative of signals detected, for the purpose of detecting a material without signal artifacts arising from, for example, dirt present on the side of •oo* *the substrate opposite the support surface. The substrate may be provided with distributed address means for modulating a light beam with digitally encoded position 20 information indicative of an area currently being scanned by the light beam, one or other of the detectors being arranged to decode the received light signal to determine the address of the location on which the light beam is incident.
S•Preferably, said electromagnetic radiation is visible light although infra-red or 25 ultra-violet radiation may be suitable.
Preferably, the disc comprises a lower layer of transparent plastic on the surface of which is impressed, or otherwise produced, said digital information. This surface is coated with a partially reflective layer, for example of aluminium, which in turn may be covered by a further layer of transparent plastic.
In an embodiment of the invention the upper surface of the disc is provided with a 3D surface topology arranged to provide growth and attachment curs for cells grown on the surface. For example, the surface may be provided with a rectangular grating for causing cells to align in a chosen direction. Alternatively, growth and attachment cues may be provided by chemical patterning of the surface, e.g. using fibronectin, produced, for example, using photolithography.
In another embodiment of the present invention the upper surface of the disc is coated with a gel suitable for carrying out electrophoresis on proteins, DNA etc. In order to run the gels radially, a first electrode may be provided at the centre of the disc with a second electrode being provided around the periphery of the disc. A well may be formed in the gel into which the analyte can be placed.
In order to calibrate a system embodying the present invention, the disc may 15 be provided with a calibration track, e.g. a series of 256 grey levels. These levels may •be printed onto the surface of the track using an ink jet printer.
In a preferred embodiment, the substrate includes a preformed calibration scale which enables calibration of said system. Preferably, the calibration scale is a series 20 of graded grey regions which reflect or transmit light to varying degrees. This scale o• may be printed on a surface of the substrate using an ink jet printer.
In this specification, the word "comprising" is to be understood in its "open" sense, that is, in the sense of "including", and thus not limited to its "closed" sense, that is the sense of"consisting only of'. A corresponding meaning is to be attributed to the corresponding words "comprise", "comprised" and "comprises" wherever they may appear.
For a better understanding of the present invention and in order to show how the same may be carried into effect, embodiments of the invention will now be described, by way of example, with reference to the accompanying drawings, in Swhich: FIG. 1 shows a diagrammatic view of a first .0 0
S.
0* '0* following page is page WO 96/09548 PCT/GB9502186 embodiment of the present invention; Figure 2 shows a cross-sectional view of a part of a disc for use with the embodiment of Figure 1, drawn to a larger scale; Figure 3 shows a detailed diagrammatic side elevational view of a second embodiment of the present invention; Figures 4 to illustrate graphs of outputs from detectors D1 and D2 shown in Figure 3; 10 Figure 5 shows a schematic diagram of a control system of the embodiment of Figure 4; Figure 6 shows a diagrammatic view of a third embodiment of the invention; and Figure 7 shows a schematic diagram of a control system of the embodiment of Figure 6.
As discussed above, it is desirable to be able to optically scan a surface to which material is attached 0e for the. purpose of quantitative analysis of the material, or of a sample from which the material is derived or extracted. Figure 1 illustrates in simplified form a system which enables this to be achieved. The system uses a circular disc 1 (although any other suitable shape of disc may be used) which comprises lower and upper layers of transparent plastic material 2,3 which provide the disc with smooth upper and lower surfaces. Sandwiched between the two plastic layers is a thin layer of metal 4 which provides a light reflecting surface. The plastic may be of any suitable WO 96/09548 PCT/GB95/02186 -11material such that the material to be optically analysed can be attached to the upper surface of the disc in the same way in which it would be attached to any conventional substrate.
If the system is used to carry out an ELISA, the appropriate antibody is bound to the upper surface of the disc (this may require some pre-preparation of the surface). The surface is then exposed to the sample to be tested, e.g. blood plasma, in order to bind any 10 antigens in the sample to the antibodies. The surface is then washed to remove any excess, unbound, material and exposed to the appropriate enzyme-conjugated antibodies 5 which attach to the bound antibodies. The bound enzymes 5 can be visualised by reacting them with 15 a substrate to produce a coloured precipitate. The precipitate presents a multiplicity of minute opaque patches over the upper surface of the disc. It will be .apparent that the system is equally applicable to other types of assay which produce a colour, or other light interfering, change.
The disc is mounted on a rotatable shaft 6 which is driven by a drive means (not shown in Figure 1) causing the disc to rotate. An optical block 7 is mounted above the disc and is movable along a substantially linear track. The optical block 7 comprises a laser diode 8.
which produces a beam of coherent light 9 which is collimated and focused on to the surface of the disc 1 by a lens arrangement The optical block also WO 96/09548 PCTIGB95/02186 -12comprises a detector 11 for detecting light reflected from the surface of the metal layer within the disc.
The lens arrangement 10 includes a polarising prism 12 which allows only vertically polarised light to pass therethrough and a quarter wave plate 37 which causes light to be rotated by In operation, the disc is rotated by the drive means relative to the optical block. With the block stationary the light beam produced by the laser diode 10 travels around a circular track of the disc. By moving the optical block along its linear track it is possible to scan the laser beam around any selected circular track of the disc. In areas of the disc surface where no light absorbing material is present, light passes 15 through the upper plastic layer, is reflected from the metal layer, and travels back to the optical block, through the upper plastic layer. Light entering the optical block encounters first the quarter wavelength plate3 7 which rotates the light by a further 450, and then the polarising prism which, because the polarization of the reflected light has been rotated by 1800, causes the light to be redirected at right angles towards the detector.
When the light beam is incident upon areas of the disc surface where light absorbing material is present, light is absorbed by the material, both upon entry to and exit from the upper plastic layer of the disc, and the light received by the -detector 11 is substantially 4 WO 96/09548 PCT/GB95/02186 -13reduced.
The detector 11 is coupled to a data analysis and logging system which stores the output of the detector.
This system may store the output as a continuous analogue signal or as discrete digital samples which represents a reduced resolution image of the surface.
Assuming the latter, the sampling rate may be varied to fit the data storage capacity available.
The optical, mechanical and electrical means so far 10 described for implementing an analyte detector are substantially as conventionally used for reading data from compact discs. One such conventional system is described in the text book 'Digital Audio and Compact es I Disc Technology', 2nd edition, Edited by Luc Baert et al 15 (Sony Service Centre Europe), Newnes, 1994.
The system of Figure 1 is adequate for obtaining an image of the disc surface, or a portion of that surface when the actual location of the portion itself is no significance. However, it may be desirable to be able to scan a selected area of the disc surface, for example where an ELISA has been carried out only in that region, or when it is desired to look again at a specific region of interest.
Conventional compact discs encode digital information in an intermediate region of the disc by producing a series of perturbations 13 bumps or pits) on the upper surface of a lower plastic layer 14 and subsequently coating this surface with a reflective WO 96/09548 PCT/GB95/02186 -14layer 15 such as a thin layer of aluminium. The reflective layer is then covered with a layer of transparent plastic 16 which provides protection for the intermediate layer (Figure 2).
It is possible to use this same technique to digitally encode position information into the disc of Figure 1. Assuming that the position origin is at the centre of the disc, the first position on the innermost circular track or spiral can be imprinted with the 10 position code zero (in binary representation). Position codes can be imprinted at discrete positions every 2 to 3gm or at any other appropriate interval) around that innermost track incrementing by one between .each position. Similarly, the codes are incremented from track to track. Alternatively, address information may be distributed according to a track/sector arrangement in the same way in which servo-codes are encoded onto magnetic floppy and hard disks.
over areas of the surface of the disc which are not covered by opaque material, light incident on the upper surface of the disc is transmitted through the upper transparent plastic protective layer and is incident upon the reflective layer. This light is reflected from the reflective metal coating except where that coating lies over a bump which causes incident light to be dispersed and not directly reflected back to the detector. The output from the detector can therefore be demodulated to determine the address of the disc surface WO 96/09548 PCTIGB95/02186 which is currently being scanned.
Over areas of the disc surface where opaque material causes the incident light beam to be substantially absorbed rather than reflected, no position information will be present at the output of the detector. However, if the density of the opaque material is relatively low the gaps in the address information may not be significant.
In situations where address information is more critical however, a more sophisticated system can be utilised for which the optics are shown in Figure 3 and which makes use of discs having address information digitally encoded and distributed over an intermediate layer as described above. This system also makes use of the fact that the reflective layer can be made to transmit a significant proportion of the incident light As with the system of Figure 1, the system of the-second embodiment includes a shaft 17 on which the disc 18 is mounted and which causes the disc to rotate and means for moving the optics along a linear track relative to the upper surface of the disc. The rotation and displacement means are not shown in Figure 2 for simplicity.
The optical system of Figure 3 comprises a light source 19, which may be for example a semi-conductor laser or a light emitting diode, arranged beneath the disc. The output beam 20 of the light source is directed up an optical axis 2a to a polarising prism (a WO 96/09548 PCT/GB95/02186 -16beam splitter) 21 which allows only light of a given polarisation to pass, i.e. only the light received directly from the laser. The transmitted light is then incident upon a first lens 22 which is arranged to focus light onto the lower surface 23 of the reflective layer within the disc. A fraction of the light incident upon the compact disc is transmitted through the reflective layer and exits from the upper surface of the disc.
Any material attached to the upper surface will 10 interfere with light exiting the disc.
Transmitted light which is not interfered with is received by a collimation lens 24, focused onto the upper surface of the disc, which directs the received light onto a partially transparent mirror 25 which in turn allows a fraction of the incident light to pass therethrough whilst causing the remainder to be reflected at right angles. Light passing directly through the partially transparent mirror is incident upon a further lens 26 which focuses the light onto the detection surface of a detector D2. Light reflected at right angles by the mirror 25 is incident upon a lens 27 which focuses light onto a detector D3.
As already described, a fraction of the light incident on the reflective layer within the disc is reflected back towards the first lens 22 which acts as a collimation lens directing light back to the polarising prism 21. The reflected light is now horizontally polarised and is reflected from the polarising prism at WO 96 0 9548 PCT/GB95102186 -17right angles to the optical axis. This reflected light is received by a fourth lens 28 which focuses received light onto a detector Dl.
Light reflected by the reflective layer will be modulated with the information digitally encoded into the disc so that the output from the detector Dl will be similarly modulated. As this light does not exit from the upper surface of the disc it will not be interfered with by material attached to the upper sample support surface of the disc and address information can be -determined from the output of D1 with minimal error.
Although not shown in Figure 2, the optical block situated below the disc also incorporates tracking optics which enables the correct tracking of the disc tracks in a similar way to that used in conventional compact disc players. The tracking optics comprise a diffraction grating which splits the output from the laser into three parallel beams which are subsequently focused by the first lens to provide three slightly spaced-apart spots. The spacing between these spots is such that when the central spot is directly over the centre of one track the other two spots lie on either side of that track. The detector Dl actually comprises three adjacent detectors which receive reflected light and the spacing of which is equivalent to that between the beam spots. In order to align the laser correctly, the laser position is adjusted until the output from the centre detector is a maximum and the outputs from the WO 96/09548 PCT/GB95/02186 -18two side detectors is a minimum. A feedback control system is used to maintain the correct tracking.
The output provided by detector D2 is modulated with the digital address information encoded onto the disc and, provided that no light absorbing material is attached to the upper surface of the disc, is substantially of the form of the output of detector DI, i.e. the ratio of the output signals of Dl1 and D2 will be constant. However, if light absorbing material is 10 present on the upper surface of the disc this will interfere with light transmitted through the reflective layer and the output from detector D2 will drop whilst that from Dl1 will remain constant. The ratio of the output signals of Dl and D2 will change accordingly. If the material attached to the surface of the disc is reflective, e.g. gold labelled, the output of Dl will rise whilst that of D2 will fall when the light beam scans the material. The ratio of D1 to D2 will indicate the presence of such material.
Figure 4 illustrates the case where the bound material is absorbent but not reflective and shows at a cross-section taken through typical disc to the surface of which a stained cell 29 is attached. The reflective layer beneath the support surface is encoded with the digital address 10101. As the beam scans along the track the ratio between the output signals of detectors Dl and D2 (Fig. 4B) remains constant where the upper surface is not covered by the cell. In the WO 96/09548 PCT/GB95/02186 -19central area, however, where the cell is shown covering the upper surface, the signal produced by detector D2 falls so that the ratio (Fig. 4C) of the signals produced by Dl and D2 similarly drops.
Figure 5 shows a block diagram of a system for controlling the embodiment of Figure 3 with the flow of data through the system being indicated by arrows. The analogue outputs from detectors D1 and D2 are received by an integrated circuit 30 which determines the ratio of the two outputs. This ratio is then converted to digital form by an analogue to digital converter 31 and transmitted to a bitstream generator 34 for compression using bitstream modulation. The output from detector Dl, which represents the digitally encoded address information, is also transmitted to an address bitstream generator 33 for compression. The two channel bitstream data is received by a bitstream merge and display unit which processes the data for storage and for display.
In order to provide a more stringent measure of the variations in the intensity of light transmitted through the disc the detector D3 is provided (although this is optional) which receives light from the partially transparent mirror through an aperture 34, lens 27 and pinhole arrangement 35. This arrangement effectively reduces the area of the disc surface from which light is received by the detector D3 and also reduces the depth of focus. If the output of detector D2, or the ratio D1:D2, exceeds a predetermined threshold the output of IS WO 96/09548 PCT/GB95/02186 detector D3 can be used to increase the resolution with which the surface of the disc is viewed. The use of detectors D2 and D3 in combination prevents the likelihood of the detector D3 producing errors if the system used only detector D3. D3 may alternatively provide a second type of detector for detecting for example fluorescent light emitted by material attached to the surface of the disc.
Figure 6 shows a further embodiment of the 10 invention in which absolute position information can be determined, although the accuracy of this information may be somewhat less than that provided by the embodiment of Figures 4 and 5. However, the disc construction is considerably simplified.
15 The optical inspection system has a shaped arm 36 with a light source 37 and a detector 38 attached to the upper and lower ends of the arm respectively. The source and detector are connected to a laser controller 39 and a buffer 40, the latter being arranged to transfer detected signal data to a personal computer 41 via an analogue to digital converter 42 and a data store 43.
The disc 44 upon which the sample to be inspected is attached or supported is mounted on a rotatable spindle 45 which lies parallel to the bight 46 of the arm 36. The spindle 45 is driven be a spindle motor 47.
The optical axes of the light source 37 and detector 38 are aligned with one another along the axis A-A.
WO 96/09548 PC1T/GB95/02186 -21- The arm 36 is coupled to a stepper motor 48 which precisely rotates the arm in a plane parallel to the plane of the disc 44 such that, in combination, rotation of the arm and of the disc allows the light source/detector arrangement to be scanned across the entire useable surface of the disc. The stepper motor 48 is controlled by a motion controller 49, which in turn is. controlled by the computer 41, such that the relative position of the spindle 45 can be determined to 10 within an accuracy of 64m.
The disc is of a completely transparent material but is provided with a black bar 50 around a portion of its upper peripheral surface. The bar 50 acts as an angular calibration marking for the inspection system.
When it is required to inspect a disc, the arm 36 is **oo moved to an outermost "home" position, where the light source/detector arrangement is situated off the disc 44.
In this position, the laser and detector are calibrated to ensure a constant, maximum, output signal. The arm 36 is then rotated to move the light source/detector arrangement towards the disc.
When the edge of the disc is detected, the arm is held stationary until the calibration marking interrupts the beam. The leading edge of the marking provides an origin to which the angular position of the detector can be referenced whilst the edge of the disc provides an origin for the radial position. Due to the accuracy of the stepper motor 48 and the spindle motor WO 96/09548 PCT/GB95/02186 -22- 46, it is then possible to precisely determine the position of the light source/detector arrangement relative to the disc.
In the system of Figure 6, the disc 44 comprises a plurality of wells or indentations 51 formed in its upper surface. The wells contain the sample to be inspected and are filled, for example, by microtitration. Rather than scan the whole surface of the disc, the personal computer may be arranged to step 10 the light source/detector arrangement over the disc surface from one well to another. This is enabled by the precise position information obtained from the calibration marking and the disc edge. Figure 7 shows a flow diagram of the control process for this system.
The system of Figure 6 may be modified so that the light source 37 and the detector 38 are both arranged on the same side of the disc, with the disc being provided with a reflective coating on or beneath the surface on which the sample is supported. In this arrangement the detector detects light reflected from the reflective coating. The two main advantages of the arrangement are that the surface of the disc which does not support the sample may be safely handled, as it does not lie in the light zransmission path, and that the signal to noise ratio of the optical inspection process may be increased because light will have to pass through a sample twice in travelling from the source to the detector.
It will be apparent that various modifications may WO 96/09548 PCT/GB95/02186 -23be made to the above described embodiments without departing from the scope of the invention. For example, the support surface of the disc may be scanned with infra-red or ultra-violet radiation rather than visible light. It is also possible to scan the surface with radiation which excites fluorescence in material attached to the surface and to use the detector (D2 or D3) arrangement to detect light at the emission wavelength.
It is also possible to construct the disc in such a way that the support surface is internal to the disc and is not the upper surface of the disc. This may provide the advantages that the sample is not damaged by handling and that a precise volume of sample may be analysed. To enable the system to be used for running gels to identify proteins, DNA etc), an appropriate gel may be provided on the upper surface of the disc. Electrodes for applying a potential across the gel may be formed integrally therewith or may be printed, or otherwise deposited, on the upper surface.
The electrodes may be spaced radially or circumferentially. Pits may be provided in the gel into which the material to be run can be placed.
Another modification to the above described embodiments involves replacing the light detector with a photo-diode array, e.g. a CCD array. A preferred form of array is a linear array extending radially with respect to the disc. The light source would take the WO 96/09548 PCT/GB95/02186 -24form of a laser line generator arranged to generate a radially extending line of light aligned with the diode array. Some degree of optical magnification may be incorporated between the source and the generator to allow the resolution of the system to be varied. After each rotation of the disc, the source/detector arrangement would be stepped inwardly by the length of the laser line. The advantages of this arrangement are higher speed and higher resolution.
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Claims (27)

1. A disc for use in conducting an optical inspection of a biological, chemical or biochemical sample, said disc comprising: a substrate having a surface including a centre portion and a perimeter portion; optically trackable encoded information located on said surface, said encoded information being located in both said centre portion and said perimeter portion of said substrate surface; and a sample support surface for supporting said biological, chemical or biochemical sample for optical inspection wherein said sample support surface is internal to the disc.
2. A disc according to claim 1 in which said optically trackable encoded information is in the form of a plurality of circular tracks located in said centre portion and said perimeter portion of said substrate surface or a spiral track which extends •.from said central portion to said perimeter portion of said substrate surface. *o*o# S.
3. A disc according to claim 1 in which said optically trackable encoded information is in the form of a track which includes gaps in said encoded information. l o
4. A disc according to claim 1 in which said encoded information is reflective. O le
5. A disc according to claim 1 in which said encoded information is semi- reflective.
6. A disc according to claim 1 which includes a cover over the encoded information located on the surface of said substrate.
7. A disc according to claim 2 including: a lower plastics layer having an upper surface and encoded information in the form of a series of perturbations on said upper surface; a reflective layer coating said upper surface; and a transparent plastics layer covering said reflective layer.
8. A disc according to claim 1 in which said disc comprises a biological, chemical or biochemical material attached to said sample support surface.
9. A disc according to claim 8 in which said material attached to said sample support surface is coloured, reflective or fluorescent.
A disc according to claim 1 which includes a gel applied to said sample support surface and electrodes disposed for applying a potential across said gel.
11. A system for conducting optical inspection of a biological, chemical or biochemical sample comprising: a disc according to claim 1; and an optical inspection system including: a radiation source for providing at least one beam of electromagnetic radiation; a detection system including one or more detectors for detecting radiation reflected from and/or transmitted through said disc and tracking 20 optics which provide tracking of said beam of radiation on said optically trackable encoded information.
12. A system according to claim 11 in which said radiation source is located relative to said disc so that said sample support surface is located between said 25 radiation source and said substrate surface.
13. A system according to claim 11 in which said radiation source is located relative to said disc so that said substrate surface is located between said radiation source and said sample support surface.
14. A system according to claim 13 in which said encoded information is semi- reflective and said detection system comprises two detectors wherein one of said two detectors is located on the same side of said disc as said radiation source and the other of said two detectors is located on the side of said disc opposite said radiation source.
A system according to claim 14 in which said detection system further comprises a third detector located on the side of said disc opposite said radiation source.
16. A system according to claim 11 in which said detection system comprises a video monitor for viewing the results of said optical inspection.
17. A system according to claim 11 in which said disc comprises a gel applied to said sample support surface and electrodes disposed for applying a potential across said gel. 15
18. A method of conducting an optical inspection of a biological, chemical or biochemical sample, said method comprising the steps of: providing a disc according to claim 8; and optical inspection of the material attached to said sample "support surface, said optical inspection including the steps of: 20 tracking a beam of radiation along the optically e° trackable encoded information to produce detectable radiation which is reflected from and/or transmitted through said disc; and measuring said detectable radiation to detect the o 25 presence of Said material on said sample support surface.
19. A method according to claim 18 in which said step of measuring said detectable radiation includes providing an optical image of said material.
A method according to claim 18 in which only detectable radiation which is reflected from said disc is measured.
21. A method according to claim 18 in which detectable radiation which is both reflected from and transmitted through said disc is measured.
22. The system according to any one of claims 11 to 17 wherein said optical inspection system includes a quarter wave plate through which said beam of radiation is passed.
23. The method of any one of claims 18 to 21 wherein said step of measuring includes passing said beam of radiation through a quarter wave plate.
24. A method of conducting an optical inspection of a biological, chemical or biochemical sample employing the disc of claim 1 to be read by an optical reader, comprising the steps of: providing a sample in association with said disc; 15 conducting an optical inspection of said sample using a beam of radiation which has been passed through a quarter wave plate and said optical reader; and pro vireading encoded optically readable position and tracking information provided within said disc by said reader and using said information in conducting said 20 inspection of said sample. •o
25. The method of claim 24 wherein said step of reading uses a beam of radiation o reflected from said disc through said quarter wave plate. D 25
26. The method of any one of claims 24 and 25 wherein said encoded information is optically interrupted by the presence of said sample and said optical inspection of said sample is accomplished sequentially to the reading of said encoded information.
27. The method of any one of claims 24 and 25 wherein said disc is provided with a plurality of sample support surfaces upon which samples may be provided and a plurality of encoded information tracks, said step of optical inspection then including the sequential scanning of a plurality of samples and said plurality of encoded information tracks. a a a a a a a a a. a a. a a a a a
AU59349/99A 1994-09-21 1999-11-12 Analytical disc with optically trackable encoded information and related optical inspection system Ceased AU746419B2 (en)

Priority Applications (2)

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AU59349/99A AU746419B2 (en) 1994-09-21 1999-11-12 Analytical disc with optically trackable encoded information and related optical inspection system
AU2002300411A AU2002300411B2 (en) 1994-09-21 2002-08-02 Analytical disc with optically trackable encoded information and related optical inspection system

Applications Claiming Priority (2)

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GB9418981 1994-09-21
AU59349/99A AU746419B2 (en) 1994-09-21 1999-11-12 Analytical disc with optically trackable encoded information and related optical inspection system

Related Parent Applications (1)

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AU34815/95A Division AU714662B2 (en) 1994-09-21 1995-09-15 Apparatus and method for carrying out analysis of samples

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AU2002300411A Division AU2002300411B2 (en) 1994-09-21 2002-08-02 Analytical disc with optically trackable encoded information and related optical inspection system

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AU5934999A AU5934999A (en) 2000-01-13
AU746419B2 true AU746419B2 (en) 2002-05-02

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AU2002300411A Ceased AU2002300411B2 (en) 1994-09-21 2002-08-02 Analytical disc with optically trackable encoded information and related optical inspection system

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Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US3736432A (en) * 1971-03-22 1973-05-29 Varian Associates Bacterial colony counting method and apparatus
EP0417305A1 (en) * 1989-03-07 1991-03-20 Idemitsu Petrochemical Co. Ltd. Analyzer of liquid sample and analyzing method of liquid sample using said analyzer

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US3736432A (en) * 1971-03-22 1973-05-29 Varian Associates Bacterial colony counting method and apparatus
EP0417305A1 (en) * 1989-03-07 1991-03-20 Idemitsu Petrochemical Co. Ltd. Analyzer of liquid sample and analyzing method of liquid sample using said analyzer

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AU2002300411B2 (en) 2006-09-28
AU5934999A (en) 2000-01-13

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