AU6313000A - Recombinant hsv-1 and live viral vaccines - Google Patents
Recombinant hsv-1 and live viral vaccines Download PDFInfo
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Description
WO01/09361 PCT/ILOO/00469 -1 RECOMBINANT HSV-1 AND LIVE VIRAL VACCINES FIELD OF THE INVENTION The present invention is in the field of live viral vaccines, in particular Herpes Simplex Virus (HSV) vaccine. The present invention also concerns viral vectors carriers of heterologous or therapeutic genes for infection purposes. 5 BACKGROUND OF THE INVENTION Herpes viruses are a large group of intranuclear, double-stranded DNA viruses that are remarkably capable of establishing a latent infection for many years after primary infection. The herpes virus group is responsible for such human 10 diseases as fever blisters and keratoconjunctivitis (Herpes Simplex Virus Type 1) venereal diseases (Herpes Simplex Virus Type 1 and 2), Chickenpox (Varicella) and Shingles (Herpes Zoster) cytomegalic inclusion disease (Cytomegalovirus) infectious mononucleosis (Epstein-Barr virus), Exanthem subitum (roseola) (Human Herpes virus 6 and 7) and Kaposi's sarcoma (HHV8). 15 HSV-1 and HSV2 are related immunologically, but most of their proteins carry distinguishing characteristics which allow them to be differentiated. HSV is characterized by its ability to establish latent infection in the central nervous system (CNS) of its host specifically in the neural ganglia. The infection or reactivation may result in encephalitis. 20 There have been several attempts to develop a live HSV- 1 vaccine. U.S. 5,328,688 discloses a herpes simplex virus which has been rendered avirulent by prevention of the expression of an active product of a gene which is designated as 734.5.
WO 01/09361 PCT/ILOO/00469 -2 U.S. 4,859,587 discloses a recombinant herpes virus for use as a vaccine, both against a virulent HSV-1 and against HSV-2. The virus was prepared by taking an HSV-1 like virus recombinant from which a portion of the genome, responsible for neurovirulence, was deleted, and a gene from HSV-2 genome, 5 responsible for coding an immunity-inducing glycoprotein, was inserted into the mutated virus genome. U.S. 4,554,159 discloses a live viral vaccine against herpes simplex virus types 1 and 2 which includes at least one vaccinal intertypic (HSV- 1 x HSV-2) recombinant virus strain prepared by crossing two prototypic HSV- 1 and HSV2 1o parental virus strain in order to obtain a recombinant progeny. The parental strains have distinguishing genetic markers so that it is possible to distinguish the recombinant progeny from the parenteral strains on the basis of these markers, and at least one of the parenteral strains is also temperature sensitive. U.S. 5,641,651 discloses a synthetic herpes simplex virus promoter which 15 comprises the herpes simplex virus c gene promoter fragment operatively 5 '-linked to the herpes simplex virus y gene promoter fragment. U.S. 5,837,532 discloses a viral expression vector which comprises a herpes simplex virus type I with a DNA sequence which has an alteration in the gene coding for the Vmw65 protein, the alteration being a transition or transversion 20 alteration of 1 to 72 base pairs or a deletion of 3 to 72 base pairs, or alternatively, an insertion of an oligonucleotide sequence, wherein the alteration is carried out in the position in the gene coding for the probe in between the amino acid 289 and 412 of the protein. The viral expression vector further comprises a heterologous gene which is inserted in the region of the HSV- 1 genome which is a region non 25 essential for culture of the virus, together with a suitable promoter. Typically, the heterologous gene is a therapeutic gene which is inserted in the viral TK gene (UL23). U.S. 5,066,492 discloses a method for treating or preventing infection of human HSV- 1 infections using inoculation by a live bovine mammillitis virus.
WO 01/09361 PCT/IL00/00469 -3 U.S. 4.024,836 discloses lyophilized live herpes virus vaccine that comprises from about 0.5% to about 8% moisture. The above HSV-1 virus vaccines are either mutants in one pathogenecity gene (such as the y 34 .5 gene in U.S. 5,328,688 and the VMW 64 in U.S. 5 5,837,532) or the intertypic recombinant between HSV-1 and HSV-2 (U.S. 4,554,159). However, none of these publications led to the development of a single anti-HSV- I vaccine for human use. One of the main obstacles is the property of the live HSV- 1 vaccine viruses of these publications to enter into the nervous system of the immunized animals and to establish a latent infection therein. To date, the only lo live herpes virus vaccine that is being used to immunize humans is the OKA strain of Varicells-Zoster virus (VZV) which is an attenuated virus obtained from a VZV patient. SUMMARY OF THE INVENTION The present invention is based on a development of a unique HSV-1 15 recombinant virus termed hereinafter "HSV-1 R15 ". This recombinant virus was prepared by obtaining a parent virus, being HSV- 1 HFEM originally isolated from a patient with a mild HSV- 1 infection. HSV- 1 HFEM was shown to have a deletion in the internal repeat of UL (IRL) so that this virus was known to be apathogenic to adult mice. However this virus was still unsuitable for human immunization 20 purposes since it retained its pathogenecity to suckling mice". The HSV-1 R15 recombinant has the HFEM DNA genome in which a BamHI-B DNA fragment from a pathogenic virus HSV was inserted by recombination('). The HSV-1 R15 recombinant of the present invention was found to have several advantageous properties as follows: 25 (1) it was found to be unpathogenic to adults and suckling mice; (2) the replication of the apathogenic HSV- 1 R15 recombinant of the invention in the skin or nose epithelium of the immunized subject (mouse) is self-limited and consequently the viral DNA disappears from the site of inoculation within 3-4 days post infection; WO 01/09361 PCT/ILOO/00469 -4 (3) the recombinant of the invention is incapable of penetrating into the peripheral and central nervous system and thus in fact overcomes one of the main obstacles of prior art proposed live-viral based vaccines; (4) inoculation with the recombinant of the invention prevents, in immunized 5 mice, the entry of other pathogenic HSV- 1 into the nervous system; (5) the HSV- I recombinant of the invention is highly immunogenic and is capable of inducing, in immunized mice, an antiviral humoral immune response; (6) the recombinant of the invention is not pathogenic as a result of a stereotaxic to injection; (7) the recombinant of the invention, after being injected into mouse and rat brains did not activate the hypothalmic-pituary adrenocortical axis (HPA), did not increase the production of prostaglandin E2, did not induce IL-I gene expression outside of the hypothalamus in the injection site, in contrast 15 to the condition caused by pathogenic HSV-1F; (8) infection of mouse astrocytes under in vitro conditions with the recombinant of the invention did not induce the expression of the IL-1 gene, contrary to the situation where infection was caused with pathogenic HSV- 1 Syn 17 that induced the IL-I genes within three hours post infection; 20 (9) the recombinant HSV-1 R15 of the invention, has an active UJL23 gene coding for tyrosine kinase (TK) and thus, the virus is highly sensitive to treatment with anti-herpetic drug acyclovir, so that if desired, its infection may be controlled. The HSV- 1 R15 recombinant carries a number of deleted of genes, genomic 25 rearrangements and changes in gene expression which contribute to its lack of pathogenicity and high immunogenicity in use as a vaccine. The fact that several gene deletions and mutations occur simultaneously, prevents spontaneous revertants mutations, thus eliminating the possibility of the recombinant of the invention mutating back to produce a virulent virus.
WO 01/09361 PCT/ILOO/00469 -5 Furthermore, the positions where genomic deletions in the HSV-1 R15 recombinant of the invention took place may be used for insertion of heterologous genes into these DNA sequences. The heterologous genes may be genes which code for immunogenic proteins from other human herpes viruses (i.e. HSV-2 to 5 HHV-8) for example genes coding for HSV-2 to HHV-8 glycoproteins immediate early genes. Alternatively, the heterologous genes may be obtained from other pathogenic human RNA and DNA viruses, such as genes coding for HIV-1 gag and envelope genes and minigenes; Hepatitis C virus genes or structural proteins; 1o influenza virus genes and Dengue virus genes for structural proteins. In the above two examples the recombinant of the invention is used as an effective carrier of genes coding for immunogenic proteins of a desired virus for the purpose of vaccination against said virus. The HSV- 1 RI 5 recombinant of the invention may also be used as a carrier 15 for various heterologous genes, for purposes other than immunization, for example for therapeutic purposes utilizing gene therapy techniques. In that case the recombinant of the invention is used as a carrier for genes which expressions brings about beneficial therapeutic effect, for example, the genes may be human genes coding for cytokines and chemokines, genes coding for a missing enzyme, a 20 missing metabolite and the like, as well as genes involved with cell death. An example of the latter heterologous genes is apoptosis and tumor suppressor genes such as p53 to be inserted into cancer cells By another option, the property of HSV- 1 R15 recombinant of the invention to be able to replicate in the brain astrocyte cell cultures, while being incapable of 25 affecting nerve cells, can be used to selectively transfect only tumor astrocytes (astrocytoma) while leaving nerve cells uninfected. This property may be used to cure astrocytoma brain tumors, either by simply injecting HSV-1 R15 of the invention stereotactically to the tumor so its natural replication will destroy the tumor, or inserting in the genome of the recombinant virus of the invention various WO 01/09361 PCT/ILOO/00469 -6 heterologous cytotoxic genes, which then can selectively destroy only the astrocytoma tumor while leaving the nerve cells undamaged. The present invention thus concerns a recombinant herpes simplex virus, the genome of which comprises a mutant of the genome of HSV- 1 with the following 5 alterations: a deletion or mutation in the unique small (US) 8 gene region resulting either in expression of a non-functional gE protein or in no expression of the gE protein; and a deletion or mutation in the US 12 gene region resulting either in 10 expression of a non-functional ICP47 protein or in no expression of the ICP47 protein. The term "non-functional" refers to a protein which is incapable of carrying out this normal physiological activity. In the case of US 8 gene, the normal expression product of the gene is a protein termed "truncated gE" and an 15 unfunctional product is a protein which cannot form a dimer with gI protein. In the case of US 12 gene the normal expression product of the protein ICP47, which binds to and inhibits transport of nonapeptides by TAPl/TAP2 dimer to HLA (MHC) Class I polypeptides in endoplasmic reticulum (ER) of infected cells. A "non-functional" US 12 expression product is a product which cannot carry out 20 said inhibition of transport. Within the scope of the invention are any mutations or deletions in the genes which results in an unfunctional protein or results in no expression of viral proteins altogether. The mutations or deletions may be in the coding region of the gene or in the control regions thereof, resulting in the above non-expression or expression of 25 non-functional proteins. The term "deletion " can refer to partial deletion or complete deletion of the gene sequence. Where partial deletion occurs it should be of a length sufficient to avoid expression of the protein or of a length required to produce a non-functional protein. The term "mutation" refers to an addition, replacement or rearrangement 30 of at least one nucleic acid, as compared to the native HSV-1, resulting either in WO 01/09361 PCT/ILOO/00469 -7 production of a non-functional expression product or in complete lack of production of expression product as explained above. Again, mutation and alteration may be in the coding or non-coding regions of the gene. Preferably, the recombinant virus of the invention should contain, in 5 addition to the above two alternatives, at least one additional deletion or mutation in a gene selected from the group consisting of: US 9; US 10; and US 11 tegument proteins, said deletion or mutation either eliminating production of the expression product of these genes or alternatively producing non- functional expression products as explained above, i.e. a product which is unable to carry out the normal 10 physiological activites of its unmutated counterparts. Most preferably, the recombinant of the invention should have said deletion or mutation simultaneously in US 9 and US 10 and US 11 so that either none of the expression products of these genes are produced, or the expression products produced are non-functional expression products as explained above or a 15 combination of non-expression and non-functional expression. US 9 codes for the synthesis of tegument phosphorylated protein, US 10 codes for another tegument protein. US 11 codes for a tegument protein that binds the 60 S ribosomal subunits in infected cells and also binds to mRNA transcripts of the gene UL 34 (membrane-associated phsophorylated virion protein). 20 Non-functional products of the above are products which cannot carry out their usual physiological activity of the unmutated counterpart. In accordance with the preferred embodiment of the invention, the recombinant of the invention completely lacks the US 12 region, the US 9 region, the US 10 region and the US 11 region, by deletion of the full sequence of these 25 genes; and the US 8 region is mutated by reverse splicing and recombination so that it codes for a shorter non-functional product of gE having 188aa (as compared to a functional gE having 550aa in HSV-1 Synl7), which protein is identical to the N-terminus 170aa of gE protein of HSV- 1 Syn 17. The product of the mutated US 8 gene, i.e. the truncated gE protein, does not form a heterodimer with the gI coded WO 01/09361 PCT/ILOO/00469 by US 7, and without said heterodimer HSV- 1 R15 is incapable of penetrating and infecting nerve cells. By another preferred embodiment, the recombinant herpes virus of the invention contains a duplicate of at least one of the following genes: the US 1 gene 5 coding for ICP 22 (IE4) and US2 gene coding for ORF 291 aa. The presence of two US genes is a special feature of HSV- 1 R1 5. The function of ICP22 is regulation of 72 gene expression and viral gene transcription that allows the virus to produce high titers of infectious virions. Most preferably, the duplication should be so that at least one and preferably jo both of these genes appear both in the Internal Repeat of S (IRS) and Terminal Repeat of S (TRS). By an additional preferred embodiment, the recombinant of the invention does not express UL54, and the gene products ICP27 and y1 34 .5 gene product ICP34.5, which is a neuro-virulence factor. It was reported that deletions or 15 mutations near the US 12 gene may affect the expression of the above mentioned genes by an unknown mechanism. However, it may be that non-expression of these products is an event independent of the deletion in the US 12. By a yet further additional embodiment the recombinant of the invention carries an active UL23 gene coding for tyrosine kinase (TK). This results in a 20 recombinant virus that is sensitive to treatment with the anti-herpetic drug acyclovir. Thus, where it is desired to control replication of the recombinant of the invention, for example where the vaccinated individual develops defficiency syndrome, control may be achieved by administration of acyclovir,. By the most preferred embodiment the present invention concerns a 25 recombinant as shown in Figs. 10, 11 and 12 under R15. The present invention further concerns an anti-HSV-1 vaccine comprising as an active ingredient the recombinant R15 herpes simplex virus of the invention, optionally together with an immunologically acceptable carrier. By another alternative, the invention concerns DNA vaccine expressing a viral glycoprotein WO 01/09361 PCT/ILOO/00469 -9 B gene. Immunization with HSV DNA vaccines before or together with HSV-1 RI 5 will increase the protection of the vaccinees. By another embodiment the present invention concerns an anti-herpes 2, herpes 3, herpes 4, herpes 5, herpes 6, herpes 7 or herpes 8 vaccine, comprising as 5 an active ingredient the recombinant virus of the invention having in its genome a heterologous sequence obtained from herpes virus 2 to herpes virus 8, respectively, said heterologous sequence coding an immunogenic protein of said virus. Preferably, the immunogenic protein should be the appropriate herpes virus glycoprotein obtained from the relevant herpes sepecies. 10 The present invention also concerns a method for immunizing a subject against herpes simplex 1, or any one of herpes viruses 2-8 as described above by administering to said subject an immunologically effective amount recombinant herpes simplex virus as described above. For example, the immunization may be by infecting a superficial scratch in the skin of the upper arm of the immunized is subject. Another embodiment of the invention is based on the realization that the recombinant HSV-1 R15 of the invention is capable of replicating selectively in brain astrocytes while not infecting nerve cells. Thus, the present invention further concerns a pharmaceutical composition for the treatment of astrocytoma brain 20 tumor comprising as an active ingredient the recombinant virus of the invention. The HSV-1 R15may reach the brain by stereotactic injection, into the brain tumor. Whilst within the brain, the recombinant herpes virus of the invention will replicate only in the astrocytoma tumor cells, and thus destroy them by its natural replication, while maintaining nerve cells undamaged. 25 By another alternative, the HSV-1 R15 of the invention may comprise also heterlogous sequences which are known to be cytotoxic, such as genes that induce apoptosis. Then, the pharmaceutical composition of the invention would contain said cytotoxic-containing recombinant viruses. These sequences responsible for 30 cytotoxicity will be expressed only in cells infected with the recombinant virus of WO 01/09361 PCT/ILOO/00469 - 10 the invention, i.e. only astrocytes while other brain cells which were unaffected by the virus will not be damaged. In addition, the pharmaceutical composition of the invention can be used for the treatment of solid tumors in the skin and internal organs, either utilizing recombination of the invention without heterologous 5 sequences, or such recombinants having also cytotoxic heterologous sequences. By yet another embodiment, the herpes simplex recombinant of the invention may be used to prepare other pharmaceutical compositions for treatment of diseases, disorders or pathological conditions wherein a beneficial effect may be evident by expression of a desired gene in cells, for example, genes that will inhibit to tumor cell-cycle by expressing the human PML gene in-situ in gene therapy. The present invention also concerns such recombinant virus having heterologous sequences inserted therein which upon expression, for example, in gene therapy, provide beneficial therapeutic effects such as inhibition of tumor growth. The heterologous sequences, either for preparing vaccines for immunizing 15 against herpes virus or other DNA or RNA viruses inserted for the purpose of treatment of astrocytoma or for any other gene therapy purposes, should preferably be inserted into HSV RI 5 genome at the site of the deletion of the genes (such as in sites of deletion of the US 9, US 10, US 11 or US 12 genes or that are not essential for the virus replication. The expression of the heterologous sequence can be under 20 the control of any one of known control elements, such as HSV-1 or CMV promoters. BRIEF DESCRIPTION OF THE TABLES Table 1A Pathogenicity of different HSV- 1 strains to adult mice; Table 1B Pathogenicity of different HSV-1 strains to suckling mice; 25 Table 2 Distribution of HSV- 1 R1 5 DNA in brain tissues of adult mice after intranasal immunization in comparison with the apathogenic strain HSV-1 vhs (UL41); Table 3 the penetration of HSV-1 R15 into the spinal cord and adrenal glands after infection in the mouse footpad skin; WO 01/09361 PCT/ILOO/00469 - 11 Table 4 Pathogenicity of HSV- 1 in mouse strain A/J which were inoculated intracerebrally (50 pl/animal) or intraperitoneally; and Table 5 Inhibition of HSV-I R15 and HFEM plaque formation by acyclovir. 5 Table 6 ICV inoculation with R-15 and monitoring of aggressive behavior, fever, PGE2 production and the challenge with strain Syn 17+. BRIEF DESCRIPTION OF THE DRAWINGS In order to understand the invention and to see how it may be carried out in practice, a preferred embodiment will now be described, by way of non-limiting I o example only, with reference to the accompanying drawings, in which: Fig. 1A shows survival of adult Sabra mice immunized with apathogenic HSV-l strains after challenge with the pathogenic HSV-1 F; Fig 1B shows survival of suckling Sabra mice immunized with apathogenic HSV- 1 strains after challenge with the pathogenic HSV- 1 F; 15 Fig 2 shows PCR test to detect the presence of HSV- 1 F DNA in the olfactory bulbs, amygdala and trigeminal ganglia of intranasally infected mice that were immunized with HSV-1 R15 by the footpad route; Fig 3 shows neutralizing anti-HSV- 1 antibodies in sera of mice, immunized with HSV-1 R15, prior to and after challenge with the pathogenic 20 HSV-l F; Fig 4 shows a scheme of the recombination experiment in which BamHI B DNA fragment from the pathogenic HSV-1 F was recombined with HSV-1 HFEM genomic DNA. From this experiment HSV-1 R15 was isolated; Fig 5 shows a map of the genes and their RNA transcripts in the 25 IRS-US-TRS DNA of HSV-1 Syn17 and HSV-1 R15; Fig 6 shows Northern blot analyses of RNA transcripts of genes in the IRS-US-TRS DNA of HSV-1 R15; Fig 7 shows Southern blot analyses of HSV-1 Syn17, HFEM and R15 IRS-US-TRS DNA with OriS and US12 probes; WO 01/09361 PCT/ILOO/00469 - 12 Fig 8 shows Southern blot analyses of the BamHI DNA fragments from HSV-l Synl7, R15 and HFEM DNA; Fig 9 shows nucleotide sequence analysis of the 4182 bp of HSV-1 R15 DNA fragment Hpa]-EcoR1 (coordinates 141611-146693); 5 Fig 10 shows rearrangements in HSV-1 RI5 IRS-US-TRS DNA; Fig 11 shows comparative maps of IRS-US-TRS regions of HSV-1 Syn17 and HSV-1 RI5 US DNA; Fig 12 shows rearrangements of the genes in the HSV- 1 R1 5 IRS-US-TRS DNA compared to gene arrangement in HSV- I Syn 17 DNA; 1o Fig 13 shows a PCR test to differentiate HSV-1 R15 DNA from DNA of pathogenic HSV-1 strains; Fig 14 shows FACS analysis of the HLA class I molecules on the cellular membrane of human fibroblasts after infection with HSV- 1 Syn 17 and RI 5; Fig 15 shows a map of part of UL-IRL-IRS of HSV-1 Syn17 and the 15 deletion in HFEM BamHI-B DNA; Fig 16 shows a western blot analysis to detect ICP 34.5 protein in cells infected with HSV- 1 strains; Fig. 17A, 17B and 17C shows survival of mice challenged with HSF-1 w.t. F and immunized by ocular route (17A); skin route (17B) or lung 20 route (17C); Fig. 18 shows ICP27 protein detection in HEK 293 cells infected with HSF-1 F; R15 and Moch; Fig. 19 shows the replication rates of R15, P-17, R-19 in astrocytes; and Fig. 20 shows induction of IL-IB gene expression (as determined by 25 RT-PCT induction) in astrocytes by HSV- 1 strain Syn 17+ and by R- 15.
WO 01/09361 PCT/ILOO/00469 - 13 DETAILED DESCRIPTION OF THE INVENTION EXPERIMENTAL PROCEDURES 1. Mice Mice of the Sabra strain (outbred) were supplied by the breeding facility of 5 the Hebrew University. Ten mice inhabited each cage. They received standard nutritional and water supplies in the SPF of the Animal Containment Facility of HUJ. 2. Cells and medium 10 The cell lines Vero (kidney epithelium cells of the green monkey) and HeLa (Human) were grown in a medium of DMEM (GIBCO) enriched with 10% fetal calf serum (Beit HaEmek) and supplemented with 40 units/ml penicillin and 160mg/ml streptomycin. The cells were grown in culture dishes (NUNC, Denmark) at 37"C with 5% CO 2 tand in 100% relative humidity. The cells were 15 transferred from the dishes by immersing them in a 1:5 solution of 0.25% trypsin (w/v) and 0.2% EDTA, and inoculated under the same conditions described above and grown to confluent monolayers. Primary astrocyte cultures were prepared from newborn rat cerebral hemispheres. Following dissection and removal of meninges, the tissue was 20 enzymatically (trypsin) and mechanically dispersed, centrifuged through 4% BSA layer, and 3-3.5x10 cells were seeded onto poly-D-lysine coated T-75 flasks. After 1-week growth, microglia and oligodendrocyte lineage cells were separated by the shaking method and the remaining astrocytes were passaged once, resulting in 95% pure astrocyte cultures. 25 3. Viruses 3.1 Virus strains and recombinants. The HSV-1 virus strains used in this study were KOS, HFEM, F (kindly provided by Prof. Rapp, Pennsylvania, USA), the mutant vhs-I (kindly provided WO 01/09361 PCT/ILOO/00469 -14 by Dr. Nitza Frenkel, Tel Aviv University), and Syn17 (provided by Prof. Subak-Sharpe, Glasgow, Scotland). The recombinants HSV-l R15 and R19 were prepared by Dr. A. R6sen-Wolf and Prof. G. Darai, Heidelberg University, Heidelberg, Germany. 5 They were produced by recombining the BamHI-B DNA fragment (coordinates 113,322-123,464) from HSV-1 F strain with the HSV-1 HFEM DNA genome. The recombinant HSV-M-lacZ (F blue) was also prepared by Dr. A. Rosen-Wolf in the laboratory of Prof. G. Darai. The DNA fragment coding for the UL56 gene (coordinates 116,030-121,753) of the HSV-1 F strain was 10 exchanged with a DNA fragment containing the bacterial gene for p-galactosidase under the control of the RSV promoter. The pathogenic recombinant viral strains P42 and P71 were prepared by Dr. T. Ben-Hur in the laboratory of Prof. Y. Becker, Jerusalem, Israel. These strains were the result of the recombination between the NruI-BamHI DNA 15 fragment (coordinates 111,290-113,322) from the virulent HSV-1 R19 recombinant with the avirulent HSV- 1 R1 5 recombinant DNA genome. TK mutants were produced in the laboratory of Prof. Becker using BUDR (F TK, F blue TK, R15 TK, KOS TK Syn-17 TK). The viruses were grown in Vero cells until a full cytopathic effect was 20 obtained. The virus titer was examined using standard plaque assay and the virus stocks were kept at -70*C. Sonicated suspensions of uninfected cells (Mock) served as a negative control in the mice infection trials. 3.2 Determination of the virus titer. 25 Vero cells were infected with 10 fold dilutions of the newly prepared virus stock. After one-hour adsorption, the cells were coated with an overlayer containing 0.7% agar in DMEM and incubated in a CO 2 incubator 37 0 C. After 3 days the cells were fixed with 25% formalin solution and stained with gentian violet. Virus plaques were counted and titer determined in plaque forming units 30 (pfu/ml).
WO 01/09361 PCT/ILOO/00469 - 15 4. Infection of mice with virus Three-to-four-week-old male Sabra mice were infected with the HSV-1 strains and recombinants at different titers. Each mouse received 30-50 lJ of diluted virus stock introduced into the nose. Suckling mice (7 days old) were 5 infected by the same methods with 10 pl of the diluted virus stock. In the preliminary experiments the mice were anesthetized with Halothane vapors for 10-20 seconds before virus infection. It was found that the virus infection in these mice caused pathological changes not only in CNS, but also in the lungs. Therefore the mice were not anaesthetized before infection. Progression of the 10 disease was monitored for 4-6 weeks. Mice of the control groups (Mock) were treated by the same mode. The follow-up was done every day by two neutral investigators. The results were registered and compared. The major stages of the developing HSV-1 viral disease (Herpetic encephalitis), in murine model, are: 1. Adynamia - Lack of movement; 2. Flexia 15 of the body; 3. Hair-raising; 4. Conjunctivitis (eye infection); 5. Acrocyanosis (body appendages turn blue); 6. Convulsions of the muscles; 7. Paralysis; 8. Death. The degree of severity of the symptoms is graded from (-) (no disease manifestation) to (++++) (most extreme expression of the disease symptom). 20 5. Extraction of tissue sample s from infected mice The mice were sacrificed by cervical dislocation and the tissues required for the analysis were removed by dissection. The tissue samples (nose epithelium, trigeminal ganglia, olfactory bulb, spinal cord and adrenal glands) were 25 transferred to test tubes and kept at -70"C for further analysis. 6. Preparation of the serum The HSV-1 infected mice were sacrificed by cervical dislocation and the thoraces of the mice were immediately surgically opened and the heart was 30 exposed. Blood was extracted with a Pasteur pipette, transferred to an Eppendorf WO 01/09361 PCT/ILOO/00469 -16 test tube. incubated for two hours at room temperature and centrifuged for 10 minutes at 14000rpm. The upper part of the liquid (sera) containing the antibodies was transferred to Eppendorf test tubes and kept at -20'C for further analysis. 5 7. Determination of the titers of neutralizing antibody in sera from infected and immunized mice 100 pl serum (in appropriate dilution) was mixed with 100 pL viral stock io (in a titer of 10 3 pfu/ml) and with 50 pl of growth medium DMEM and incubated for 2 hrs at 4"C. This mixture was added to the Vero cell monolayer incubated at 37"C with 5% CO 2 and standard plaque assay was performed. The level of neutralizing antibodies was calculated according to the percentage of viral plaque inhibition. 15 8. Detection of infective virus in mouse tissues Tissue samples were homogenized in a Dounce homogenizer in 1 ml PBS. After homogenization, 200 pl of the sample was sonicated and added to Vero cell monolayer. The cells were incubated at 37"C with 5% CO 2 for several days and 20 the cytopathic effect of the virus was observed. 9. Preparation of high molecular HSV-1 DNA 9.1 Preparation of purified HSV-1 virions Virus-infected cells (10 9) were washed in TBS buffer, scraped into a 25 minimal volume of the buffer, sonicated for 2 min and mounted onto a sucrose gradient (12%-52% w/w sucrose in TBS buffer) in nitrocellulose test tubes. The gradients were centrifuged for one hour at 25000 rpm in rotor TST-28. The band of virions was transferred to polyalomer tubes and diluted in TBS. The tubes were centrifuged again under the same conditions and the virion pellet was resuspended 30 in 1ml TE buffer.
WO 01/09361 PCT/ILOO/00469 -17 9.2 Preparation of high molecular viral DNA from purified virus (9.1). from the virus-infected cells or from tissue samples. 0.5ml or l.Oml of TE buffer was added to a sample in the presence of 5 Proteinase K (Sigma) (final concentration of 0.5mg/ml) and 1% SDS (Sigma). The samples were incubated for 2 hours at 55 0 C or at room temperature (R.T.) overnight, with gentle shaking. The sample lysate was extracted twice with phenol and then with chloroform containing 4% isoamyl alcohol. The DNA was precipitated from the aqueous phase with ethanol, dissolved in 400ml of TE io buffer and kept at 4 0 C. 10. Indirect immunofluorescent stainings Subconfluent monolayer cell cultures that were grown on coverslides were infected with HSV- 1 virus (or treated by another way). Suspension cultures were 15 attached to coverslides using poly-L-Lysine solution 1:10 (Sigma). Cells were fixed with 4% formaldehyde (10', R.T.) and rehydrated with PBS (5' x 2, R.T.) with gentle shaking. Cells were washed with 50mM NH4Cl (5', R.T.) and afterwards withtPBS (5', x 2 R.T.) (At this stage the procedure may be interrupted and the slides can be frozen at -20"C). 20 For blocking of the Fc receptors on the cells, slides were incubated with 5% Normal Goat Serum (20', R.T.) and then washed with PBS (5', R.T., x3). Then cells were incubated with a primary antibody (lhr, R.T.), washed with PBS (5', R.T. x3), incubated with secondary antibody (45', R.T., in darkness), and washed with PBS (5' R.T. in darkness). Slides were prepared using antibleaching 25 medium (45ml glycerol pH 8.5, 5ml PBS pH 7.4- pH7.5, 0.5g DABCO (Sigma) and 0.05g NaN3) and kept at +4 0 C in the dark. When working with paraffin-embedded slides, the deparafinization procedure is necessary prior to fixation. Slides washed with xylene (5', R.T. x3), then with 100% ethanol (5', R.T., x 2 (3)), then with 96% ethanol (5', R.T. x2 (3) 30 and finally with doubly distilled water (DDW) (5', R.T. xl).
WO 01/09361 PCTIILOO/00469 - 18 In some cases the use of 0.01% triton xlOO solution prior to incubation with a primary antibody is recommended. 11. Investigation of RNA expression in cells 5 11.1 Extraction of total RNA from cells using CsCl method. RNA was extracted from infected cells or uninfected cells by suspending the cell pellet in a solution containing 25mM sodium citrate, 4.5M guanidium thiocyanate, 0.5% sodium lauryl sarcosine, 0.1% antifoam, and 47mM mercaptoethanol. Cell lysates were centrifuged for 14 hours at 36000rpm in rotor io TST-55.5 of the Beckman preparative centrifuge, through a layer of CsCl, at a concentration of 5.7M. The RNA that was centrifuged to the bottom of the test tube was suspended in 0.3M NaAcetate, precipitated with ethanol, and dissolved in RNase free DDW. 15 11.2 Electrophoresis of RNA in glyoxal gels RNA was added to a solution that contained 10mM Sodium phosphate at pH6.5, 50% DMSO, IM de-ionized glyoxal and was incubated for 30 min at 50"C. The RNA was electrophoresed in the presence of loading buffer (10mM EDTA, 0.05% Bromophenol blue and 60% glycerol) in agarose gel (1.5%) that 20 contained 10mM Sodium phosphate at pH 6.5. The gel was run in a Sodium phosphate buffer at pH 6.5. Each gel contained a sample of RNA with Ethidium bromide (EtBr), for the determination of the position of the 18S and the 28S RNA as molecular weight markers. 25 11.3 Fixing RNA to a nylon filter (Northern blot) The RNA from the gel was transferred by the capillary blot method to a nylon filter (0.2 [im), by placing the gel on an absorption paper (Whatman 3MM) soaked in 25mM sodium phosphate at pH 6.5. A nylon filter, 8 layers of absorption paper in a phosphate buffer, 8 layers of dry absorption paper, many WO 01/09361 PCT/ILOO/00469 -19 layers of paper towels and a one-kilogram weight were placed on the gel. After 12-18 hr the nylon filter was dried and baked in 80"C oven for one and a half hrs. 11.4 Preparation of specific DNA probes 5 11.4.1 Purification of DNA from agarose Viral DNA fragments that were cloned in plasmids served as a source for molecular probe preparation. The plasmid DNA was cleaved by restriction enzymes (which were used in the cloning) and the DNA was 10 electrophoresed in agarose gels. The band containing the viral DNA fragment that will be used as a probe was excised and transferred to an Eppendorf tube. To obtain an agarose-free DNA fragment, the DNA was purified by Gel extraction kit (Jetsorb, Promega), suspended in TE buffer and kept at -20 0 C. 15 11.4.2 Labeling of DNA with radioactive phosphate by Nick translation Viral DNA, serving as a probe in hybridization experiments, was labeled by the Nick translation method using the BRL kit. The reaction 20 was carried out in the presence of 100 ici of dCTP (cc P) together with the other 3 unlabeled deoxyribonucleotides. After incubation for 90 min at 140C the reaction was stopped and the labeled DNA was separated from the free nucleotides on a G-50 sephadex column that was washed with TE buffer. The reaction products were loaded onto the column; the fraction of 25 labeled probe was collected. The radioactivity was measured with a scintillation counter. The labeled probe was used in the Southern or Northern hybridization experiments. 11.5 Hybridization of RNA with DNA probes. 30 The nylon filter was put in a bag or hybridization bottle and incubated 3 hrs at 42'C in the presence of 50% formamide, 5 x Denhardt buffer, 50mM WO 01/09361 PCT/ILOO/00469 -20 Tris-HCL, pH 7.5. 0.7M NaCl 0.1% sodium pyrophosphate, 1% SDS, 10% Dextrane sulfate, 400mg/ml of salmon sperm DNA that underwent denaturation. The labeled DNA probe (2 x 106 cpm) was added to the bag or bottle and the filter was incubated for 16 additional hours. The filter was washed twice for 10 5 min at room temperature in a solution of 2 x SSC and 0.1% sodium pyrophosphate, once for 30 min at 600C in a solution of 2 x SSC, 0.1% sodium pyrophosphate and 0.1% SDS, and once for 30 min at 60 0 C in a solution of 2 x SSC and 0.1% SDS. The filter was exposed to Agfa X-ray film in a cassette with enhancing screen and kept at -70"C for several hours. 10 12. Identification of specific DNA by hybridization to a DNA probe 12.1 DNA electorphoresis in agarose gels High molecular DNA (8pg) prepared from HSV-1-infected cells or from HSV- I purified virions was incubated with 5 units/[g DNA restriction enzymes 15 in final volume of 100 1 overnight in 37 0 C. The samples of the restricted DNA were electrophoresed in 0.8% agarose gel in TEAN buffer at 25 volts (35v/15OmAmp) overnight. 12.2 Denaturation and neutralization 20 The gel was placed on glass in a bowl and shaken gently with a solution of 0.5N NaOH and 1.5M NaCl in room temperature for one hour. The neutralization is achieved by substitution of the alkaline solution with a neutralizing solution of IM Tris pH8.0 and 1.5M NaCl at room temperature while gently shaking for 30 mm. 25 12.3 Fixation of DNA to the nylon filter (Southern blot) Same procedure as for RNA. 12.4 Hybridization of DNA with DNA probes 30 Same procedure as for RNA with the following changes: WO 01/09361 PCT/ILOO/00469 -21 a) Hybridization buffer contained 50% formamide, 10 x Denhardt, 5 x SSPE, 1% SDS and 400mg/ml denaturated salmon sperm DNA. b) The filter was washed twice for 15 minutes at R.T. in a solution of 2 x SSC and 1% SDS and once for 2 hours at 65 0 C in a solution of 5 0.1 x SSC and I% SDS. 13. Cloning of viral DNA and sequence analysis 13.1 Preparation of the viral DNA fragments and plasmid vector Viral DNA fragments and the plasmids cleaved with suitable restriction enzymes jo were purified from agarose gel (see also Section 11.4). 13.2 Ligation Plasmid and viral DNA were mixed in a molar ratio of 1:10 in the presence of the enzyme T 4 DNA ligase (Promega), an appropriate buffer and 15 incubated at 16"C overnight. 13.3 Bacterial transformation An E. Coli bacterial colony of the dHa5 strain or the JM109 strain was grown overnight at 37 0 C in LB medium. The next day a culture of competent 20 bacteria was prepared by the CaCl 2 /RuCl 2 method (Kushner 1978). 50ng of plasmid DNA after ligation was added to 100pl competent bacterial culture for 20 minutes packed on ice. The bacteria were transferred to 42 0 C for one minute, then to ice for two minutes and immediately afterwards Iml LB was added and the bacteria were incubated for one hour at 37C. The bacteria were seeded onto a 25 LB plate containing 1.5% agar and 100 1 .g/ml of ampicillin. When necessary 40 pl of 2%X-Gal (sigma) solution and 40 [11 of 2% IPTG (Sigma) was added to the bacteria during the seeding. The plate was incubated overnight at 37*C.
WO 01/09361 PCT/ILOO/00469 -22 13.4 Colony hybridization The bacterial transformed colonies that were transferred to nitrocellulose filters, BA-85 0.4 [m, 80mm diameter (Schleicher and Schuell). In order to enable compatibility between the colonies on the filter that were indicated by a 5 specific probe and the same colonies on the agar plate, the filter and the plate were designated in the same manner. Four trays are prepared upon which four layers of no. 3 Whatman paper soaked with one of the following four solutions: Tray 1 - 0.2NNaOH, 1.5NaCl Tray 2 - 0.4MTris pH 7.6, SSC x 2 10 Tray 3 - 0.4MTris pH 7.0, SSC x 2 Tray 4 - SSC x 2 In the first stage the filter is placed on the bacterial plate for one minute and then transferred to the four trays in the above numerical order in each tray for one minute. The filter was placed in each tray upon a wet Whatman paper so the 15 colonies face up. The filter is air-dried and then baked in a vacuum oven at 80 0 C for two hours. At this point the procedure is as in Southern blotting: Nick translation of probe, hybridization, and washing as specified: one half hour at room temperature in SSC x 2 + 1% SDS and twice for ten minutes at 65 0 C in SSC x 0.5 + l%SDS. 20 13.5 Rapid preparation of plasmid DNA Bacterial colonies were grown in LB liquid culture overnight, then precipitated and suspended in 100 l solution of 50mM glucose, 10mM EDTA, 25mMTris pH 8.0 and 4mg/ml lysosome. After 5 minutes, 2 00 pl solution of 25 0.2MNaOH and 1% SDS were added and incubated for 5 minutes on ice. 150 pl solution of 5MKAc at pH5.6 were added for 5 additional minutes, then centrifuged and the DNA was extracted with phenol/chloroform. The aqueous phase was precipitated with ethanol and the DNA was dissolved in TE buffer.
WO 01/09361 PCT/ILOO/00469 -23 13.6 Determination of DNA nucleotide sequence The plasmid DNA was purified using Promega's Wizard plus sv miniprep DNA purification system (Promega). Determination of the sequence is carried out on 10 Lg of DNA in the DNA Analysis Unit of the Life Sciences Institute of the 5 Hebrew University of Jerusalem (ABI - PRISM, Model 377). Several of the plasmids containing cloned HSV-1 were sent for sequence determination to the laboratory of Prof. G. Darai, Heidelberg, Germany. 13.7 Computer analysis of the DNA sequences 1o Computer analyses of amino acid sequences and proteins was carried out using the program package UWGCG of the University of Wisconsin. The nucleotide sequence of HSV-1 Syn17 DNA was obtained from Genbank. 14. Identification of viral DNA by the PCR method 15 14.1 Identification of HSV-1 viral DNA by PCR The primers used in the PCR experiments were synthesized according to the sequence of HSV-1 UL53 (gK) essential gene. Direct primer 5' TCATCGTAGGCTGCGAGTTGAT 3' (22 mer) Reverse primer 5' CTCTGGATCTCCTGCTCGTAGT 3' (22 mer) 20 Origin of the sequence: Syn17 strain of HSV-1. Size of fragment: 353bp. The PCR reaction was carried out in a programmable thermal controller (M.J. Research Inc. USA) in the presence of 5 M of each primer, 50M of each deoxyribonucleotide, and 1.5mM MgCl 2 on the template of sample DNA. Reaction was performed in a volume of 50 1 DNA was denaturated (98 0 C, 10'), 25 then the temperature was lowered to 65 0 C for 10' and 2.5 units of Taq polymerase Diamond (Bioline) in 5 Ll of Taq buffer x 10 (Bioline) was added. The steps of the reaction were melting (95"C, 30") annealing (65 0 C, 30") and elongation (72'C, l'). Total 35 cycles and a last step of elongation (72 0 C, 10'). The products of the PCR reaction were run on 1.8% agarose gel in the presence 30 of PCR marker (Promega).Additional primers used in the PCR experiments were WO 01/09361 PCT/ILOO/00469 -24 synthesized according to the sequence of HSV-1 (US 6) gene that codes for glycoprotein D (gD). Direct primer 5' TTCGGTGTACTCCATGACCGTGAT3' (24 mer) Reverse primer 5' GCCGTGTGACACTATCGTCCATAC 3' (24 mer) 5 Origin of the sequence: Syn 17 strain of HSV-1. Size of fragment: 620 bp. The PCR reaction was carried out as described above. 14.2 Identification of R15 recombinant DNA by PCR The primers were synthesized according to unique sequence of R15 in the 1o right part of the US region. Direct primer 5' TCAGCACGAACGTCTCCATC 3' (20 mer) Reverse primer 5' GAACCTCTCGTGGCTCCAGCA 3' (21 mer) Origin of sequence: R15 strain of HSV-1. The size of the fragment is 319bp. The PCR reaction was performed under the same conditions (see 14.1) is except that the deoxyribonucleotides were used at final concentration of 200 pM. The steps of the reaction were: Melting (94"C, l'), annealing (65'C, 1') and elongation (72 0 C, 1'). There was a total 25 cycles ending with the last step of elongation (72"C, 10'). The products of the PCR reaction were identified by electrophoresis in 20 1.8% agarose gel in the presence of PCR marker (Promega). 15. RT-PCT RNA was purified from rat brain tissue and from astrocytes with the Qiagen kit, reverse transcribed with MuLV RT, and then PCR was done with 25 various gene specific primers.
WO 01/09361 PCT/IL00/00469 -25 16. Determination of serum corticosterone and ACTH levels and of prostaglandin synthesis Serum corticosterone and ACTH were determined by RIA, using 5 commercial antibodies. Prostaglandin E2 (PGE2) synthesis was determined by RIA in brain slices ex-vivo. Example 1 Screening HSV-1 isolates To detennine which of the HSV-1 viruses of the HSV-1 strains shown in 10 Table 1A lacks pathogenicity to adult mice, each of the viruses were used to infect 4 week old Sabra mice by instilling 50dl of 10 7 pfu/ml virus stock into the nostrils of each mouse. The infected and control mice were inspected for 2-4 weeks and the mortality of the infected mice was recorded. It was found that five virus strains (F, KOS, Syn17, and recombinants P42, and P71) were highly is pathogenic to Sabra mice and killed all the infected animals. Four TK - mutants (F TK~, F blue TK~, R15 TK~, and Syn17 TK~) were devoid of pathogenicity to adult mice. Three additional HSV-1 isolates, were apathogenic to adult mice: HFEM, HSV-1 R15 and HSV-1 vhs, a mutant with a mutation in the UL41 gene. The TK- virus mutants cannot be used for vaccine development since they are 20 resistant to Acyclovir. It was reported that HSV-1 TK mutants retain pathogenicity to newborn mice The results of the experiments presented in Table lA and Table 1B led to the conclusion that HSV-1 R15 recombinant may have the properties required for development of a live HSV-1 virus vaccine. Other HSV-1 recombinants, such as the HSV-1 R19, that were isolated from the 25 same recombination event were highly pathogenic to adult mice. The parental strain HSV-1 (HFEM) that was used for the recombination experiment was found to be apathogenic to adult mice but was pathogenic to suckling mice as shown in Table 1B and its TK~ mutant had a residual pathogenicity to suckling mice so that the parental strain was unsuitable for 30 human vaccination. HSV-1 R15, Fblue and Fblue TK~ were apathogenic to the suckling mice (Table 1B).
WO 01/09361 PCT/ILOO/00469 -26 Based on the above results, HSV-1 R15 recombinant was selected for further studies to determine its biological, immunological, and molecular properties. 5 Example 2 Protection by HSV-1 R15 inoculation from challenge with HSV-1 F Groups of 10 adult mice were inoculated intranasally (i.n.) with each of the apathogenic viruses (HSV-1 R15, HSV-1 R15 TK , HSV-1 vhs, HSV-1 F [0 blue) an additional group was used as a control. Fourteen days after the infection the mice were infected by the i.n. route with the pathogenic virus HSV-1 F. The results are shown in Fig. IA. As can be seen 90% of the unimmunized control mice died from the virus infection up to 23 day p.i. All the mice in the four groups that were immunized with the four apathogenic HSV-1 strains survived i5 the challenge with the pathogenic HSV-1 (F) virus (Fig. IA). The immunization of suckling mice was performed with four apathogenic strains of HSV- I (HSV- 1 R15, Fblue, Fblue TK~, HFEM TK~). Litters of suckling mice were immunized by the i.n. route with the apathogenic virus strains and two weeks later the suckling mice were challenged with the pathogenic HSV-1 (F) 20 and were followed for two weeks. The results shown in Fig. 1B indicate that all (100%) of the suckling mice that were immunized with HSV-1 R15 recombinant survived the challenge infection with the pathogenic virus 90% of the suckling mice that were immunized with HSV-1 F blue survived the challenge infection but only 40% of the suckling mice that were immunized with Fblue TK~ survived 25 the infection. All the suckling mice that were immunized with HSV- 1 HFEM TK~ died due to infection with the pathogenic virus as did the control mice. It was concluded that HSV- 1 RI 5 should be studied to define its molecular makeup and the reasons for its apathogenicity. 30 WO 01/09361 PCT/ILOO/00469 -27 Example 3 Determination of penetration of HSV-1 R15 into nerve cells Adult Sabra mice (4 week old) were immunized by i.n. route with two apathogenic viruses: HSV-1 RI5 and HSV-1 vhs (UL41-). At 2, 4, and 7 days p.i. the mice were sacrificed and tissue samples from the nose epithelium (NE), 5 olfactory bulbs (OB), brain amygdala (AM) and trigeminal ganglia (TG) were removed and pooled from 4 mice at each time point. The DNA was extracted from each tissue sample and subjected to a PCR test using primers that detect the presence of HSV-1 DNA. The results shown in Table 2A indicate that in mice that were immunized with HSV- I RI 5 recombinant the viral DNA was detected to only in the nose epithelium in samples taken at days 2 and 4 p.i. Viral DNA was not found in the nose epithelium at 7 days p.i. HSV-I RI5 recombinant DNA was not found in the olfactory bulbs (OB), amygdala (Am) and trigeminal ganglia (TG) of the immunized mice. It was concluded that HSV-1 is unable to penetrate into the nervous system of the immunized mice. 15 In tissue samples that were removed from mice immunized by the i.n. route with HSV-1 UL41- (vhs) mutant viral DNA was detected in the nose epithelium at days 2 and 4 p.i. but not at day 7 p.i.. However, at day 2, 4, and 7 p.i. the viral DNA was detected in the olfactory bulbs (OB) and in the trigeminal ganglia (TG) and the virus DNA persisted in these tissues on days 4 and 7. It was 20 concluded that this virus mutant was able to penetrate into the olfactory bulbs and trigeminal ganglia but not into the amygdala in the central nervous system (CNS) of the infected mice as indicated in Table 2B. It was concluded from these studies that HSV-1 R15 recombinant may have genetic modifications that render it incapable of penetration into the type C 25 fibers in the nose epithelium and as a result the viral DNA was unable to penetrate the trigeminal ganglia, olfactory bulbs and the amygdala in the CNS. The HSV-1 R15 persisted in the nose epithelium for only 4 days p.i. and was not detected on day 7 p.i.
WO 01/09361 PCT/ILOO/00469 -28 Example 4 Immunization of adult mice by injection of HSV-1 R15 recombination Three groups of 10 mice each were used: Groups A and B were 5 immunized by injection of HSV-1 R15 into the mouse footpad and Group C was not immunized. After two weeks Groups B and C were challenged with HSV-1 F and group A was injected with uninfected cell homogenate (Mock). Fourteen days post challenge, the mice were sacrificed and the tissues of the olfactory bulbs (OB), amygdala (Am) and trigeminal ganglia (TG) were removed at days 2 10 and 4 p.i., the DNA was extracted and analyzed by the PCR technique with primers that detect HSV-1 DNA. The results shown in Fig. 2 indicate that group A mice, that were immunized with HSV- I R15 by the footpad route and were mock challenged, did not have HSV-1 R15 DNA in their olfactory bulbs, amygdala or the trigeminal 15 ganglia (Fig 2, lanesl-3). Mice of group B that were immunized with R15 and challenged with HSV-1 F by the i.n. route, survived the challenge with the pathogenic virus but HSV-1 F DNA was not detectable in the olfactory bulbs, trigeminal ganglia and the CNS amygdala (Fig. 2, lanes 4-6). The unimmunized mice (Group C) that were infected with HSV- I F by the 20 i.n. route died as a result of the infection and the PCR analyses revealed the presence of viral DNA in the olfactory bulbs and the amygdala but not in the trigeminal ganglia (Fig. 2, lanes 7-9). This study revealed that immunization of mice with HSV-1 R15 in the footpad efficiently protects against infection with a wild type HSV-1 (F) by the 25 i.n. route and prevents the penetration of the pathogenic virus into the nervous system of the mice.
WO 01/09361 PCT/IL00/00469 -29 Example 5 Determination of HSV-1 R15 penetration to the spinal cord and adrenal glands One group of 10 adult Sabra mice was injected subcutaneously (s.c.) into 5 the footpad skin with HSV-1 R15 and the second group was infected with the pathogenic HSV-1 F. At 2, and 4 days p.i. the mice were sacrificed and the footpad skin, spinal cord and adrenal glands were removed, the DNA was extracted from each pooled tissue sample and tested by PCR to detect the presence of HSV-1 DNA. Table 3 shows that HSV-1 R15 DNA was detected in 10 the footpad skin tissue of the infected mice at day 2 p.i. but not at day 4 p.i. The HSV-R1 5 DNA was not detected in the spinal cord and the adrenal glands. It was concluded that HSV-I R15 is unable to penetrate into the spinal cord of the mice and therefore the adrenal glands of the mice were not infected. In contrast, the pathogenic HSV- 1 (F) DNA was found to be present in the 15 footpad skin tissue at day 2 and 4 p.i. and at day 4 the viral DNA was detected in the spinal cord and the adrenal glands of the infected mice (Table 3). These experiments revealed that in the footpad skin HSV- 1 RI 5 replicated at the site of injection for 2-3 days only and was unable to penetrate into and infect the spinal cord and the adrenal glands as did the pathogenic virus. The 20 results of this experiment are taken as an indication that HSV-1 R15 had lost the ability to penetrate into the peripheral type C fibers in the skin epidermis and therefore is incapable of penetration and infection of the spinal cord nervous system and the adrenal glands in the infected adult mice. 25 Example 6 Apathogenicity of HSV-1 R15 to strain A/J mice inoculated intracerebrally or intraperitoneally HSV-1 R15 (50 pl/animal) was inoculated intracerebrally (i.c.) into the brains of A/J mice (4 weeks old) at various concentrations ranging from 106 30 pfu/mouse to 10' pfu/mouse. The results are shown in Table 4. It was found that all mice survived the infection while mice that were inoculate with HSV- 1 (F) or HSV-1 HFEM at 1 x 102 pfu/ml died (Table 4).
WO 01/09361 PCT/ILOO/00469 -30 Mice that were infected intraperitoneally with HSV- 1 R15 at virus titers of I xt 107 or 1 x 106 pfu/ml survived the infection similar to mice that were infected with HSV-1 (HFEM) at 1 x 10 7 pfu/ml. HSV-1 (F) at 1.0 x 106 pfu/mouse killed 9 out of 10 mice (Table 4). 5 The results of the experiment revealed the apathogenicity of HSV-1 R15 recombinant (HSV-R-Fehx-C 15) to A/J mice in i.c. and i.p. routes of infection. Example 7 Determination of neurovirulance of HSV-1 K15 Inoculation of 5 x 107 pfu/ml by the nasal or corneal routes or direct io intracerebroventricular inoculation of up to 107 pfu of HSV-1 R-15 did not induce clinical signs of disease, or fever. Low virus titers were found at the site of infection at 3 days after stereotaxic injection to the hypothalamus, but no infectious virus could be isolated in other brain regions, as compared to dissemination of virulent strains. This non-virulent phenotype was stable over is many passages of the virus. This suggests that spontaneous neurovirulent revertants are not existent, or occur in frequency less than 1. Following ICV inoculation neurovirulent HSV-1 strains cause activation of the hypothalamic-pituitary-adrenocortical axis as measured by serum corticosterone and ACTH (by RIA). In addition, the virus induces an increase in 20 the synthesis of prostaglandin E2 in the brain, as measured by ex-vivo production in brain slices form various regions. Neurovirulent strains induce the expression of interleukin-1 gene in various brain regions. HSV-1 R-15 as a non-neurovirulent strain, did not activate the HPA axis, did not increase PGE2 production, and did not induce IL-1 gene expression outside from the 25 hypothalamus, which was the site of inoculation 2 . In a one-step replication experiment, strain HSV-1 R-15 infected and replicated in cultured astrocytes to titers 10-100 fold lower than the neurovirulent HFEM strain. HSV-1 R-15 titers in infected astrocytes peaked at 106 pfu/ml as compared to 10 7 -10 8 pfu/ml of the pathogenic recombinants R-19 and p 7 l. 30 Infection of the astrocytes by the neurovirulent strain Syn17 induced rapid WO 01/09361 PCT/ILOO/00469 -31 expression of the IL-1 gene (within 3 hours postinfection), as detected by RT-PCR. HSV- I R- 15 recombinants did not induce IL-I expression in astrocytes at the same timepoint. 5 Example 8 Determination of antibodies after immunization of adult mice with HSV-1 R15 To study the immune response of adult mice to immunization with by HSV-1 R15 the mice were infected by the i.n. Route and at different time 10 intervals (2, 4, 7,14 and 16 days p.i.) two mice were sacrificed, the blood was collected and the serum was prepared. The content of the antiviral neutralizing antibodies in the serum was measured. At day 14 the immunized mice were challenged with the pathogenic HSV-1 F. Fig. 3 shows that at day 7 p.i. the HSV-1 RI5 immunized mice had not yet 15 responded with the synthesis of antiviral neutralizing antibodies, but at day 14 p.i. neutralizing antibodies were present in the sera of immunized mice diluted up to 1:128. With a serum dilution of 1:8, 33- inhibition of HSV-1 F plaques was found. At day 16 p.i. the titer of the neutralizing antibodies decreased. However at day 21 post immunization (one week after the challenge infection with the 20 pathogenic HSV-i F) 100% of the virus plaques were neutralized by the serum antiviral antibodies, at serum dilution of 1:16. Example 9 HSV-1 R15 expresses the UL 23 gene that codes for the viral thymidine kinase (TK) and is sensitive to acyclovir 25 The HSV-1 R15 has an active UL23 gene that codes for the viral thymidine kinase (TK) and therefore can be inhibited by the antiviral drug acyclovir. HSV-1 R15 (100 pfu/plate) was used to infect vero cell cultures in the 30 presence and absence of different concentrations of acyclovir. It was found that acyclovir at concentrations of 10, 50 and 100 pg/ml effectively inhibited HSV-1 R15 replication (Table 5).
WO 01/09361 PCT/ILOO/00469 -32 Molecular analysis of the IRS-US-TRS DNA in HSV-1 R15 genome compared to the gene arrangements in HSV-1 Syn17 DNA The biological properties of HSV-1 R15 indicated that changes may have 5 occurred in the viral DNA genome and affected some of the viral genes that are involved in the pathogenicity of this virus recombinant. Molecular analyses of the viral Unique Small (US) DNA and its flanking repeats and part of the gene in the Unique Long (UL) DNA and its interval repeat (IRL) of the HSV-1 RI5 genomic DNA were undertaken. 10 Example 10 Recombination events between BamHI-B DNA fragments from the pathogenic HSV-1 F with HSV-1 HFEM genomic DNA yielded the apathogenic HSV-1 R15 recombinant 15 HFEM DNA genome harbors a 4 Kbp deletion (coordinates 117088 120641) in BamHI B sequence (coordinates 113322 - 123456) that affected exon 3 of the Immediate Early 1 (IEl1) gene coding for Infected Cell Protein (ICP) 0 (IE 110) and also deleted the promoter sequence of UL56 gene. Cells were transfected with the HFEM genomic DNA together with 20 HSV-1 F BamHI B DNA fragment and the progeny of the transfection was collected. The results are shown in Fig. 4. Many virus plaques were isolated from the virus progeny of the recombination experiment and all the plaques, except HSV-1 R15, yielded pathogenic viruses. HSV- 1 RI 5 recombinant (HSV-R-Fehx-C 15) was found to be apathogenic 25 to adult and suckling Sabra and A/J mice while other recombinants (for example, HSV-1 R19) were highly pathogenic to mice. Recombination events that introduce BamHI B DNA fragments of HSV-1 F into the BamHI B DNA sequence of HFEM genome may have lead to multiple changes in the HSV- 1 RI 5 genes adjacent to the BamHI B DNA recombination sites. 30 WO 01/09361 PCT/ILOO/00469 -33 Example 11 Changes in the expression of genes present in the US DNA of HSV-1 R15 The organizational map of the US 1 to US 12 genes in the US DNA of 5 HSV- I Syn 17 that serves as a model in the present studies is based on its published complete nucleotide sequence and is presented as Fig. 5. For each of the US genes the RNA transcripts are also shown. To study the expression of the US genes in HSV-1 R15 infected cells, RNA was isolated from the infected cells and identified by hybridization to 10 restriction enzyme cleaved DNA fragments of the HSV-1 US DNA (Northern blot analysis) and the results are presented in Fig. 6. The HSV-1 DNA fragments that were used as probes for the hybridization are as indicated in Fig 7. It was found that the US genes US 4 (gG), US 8 (gE), and US 12 coding for the immediate early protein IE-5 were not expressed in the HSV-1 R15 15 infected cells (Fig. 6). These findings were taken to indicate that a major change had occurred in viral genes (marked dark in Fig. 5) near the Terminal Repeat of the US (TRS) DNA. 20 Example 12 Southern blot analyses of HSV-1 R15 US DNA. To define the nature of the changes that occurred in the US genomic DNA of HSV-1 R15 near the TRS, two probes were used: Us 12 gene probe (coordinates 145312-145576) and OriS probe (coordinates 146008-146592) that contains the origin of DNA replication (shown in Fig. 7A). For hybridization 25 analyses, DNA genomes of several HSV-1 strains were cleaved with BamHI restriction enzymes. The OriS probe detected in Syn17 DNA (Fig. 7Ba) two fragments: one of 1953 bp that is the BamHI-X DNA fragment containing the OriS nucleotide present in sequence the TRS. The second DNA band of 4840 bp is the BamHI-N 30 fragment containing the OriS sequence present in the internal repeat of US (IRS).
WO01/09361 PCT/ILOO/00469 -34 In HFEM DNA the OriS probe detected a faint BamHI-X band and a ladder of bands (Fig 7Ba). The bands in the ladder contain the BamHI-X DNA fragment and multiple repeats of the 472 bp sequences containing the OriS from TRS (Fig. 9). The BamHI-N was detected by the OriS probe and also a ladder of 5 bands that contain the BamHI-N sequence and multiple repeats of the 472 bp OriS containing a fragment that is present in IRS. In HSV-l R15 DNA the OriS probe did not detect the BamHI-X DNA band (1953 bp) but detected a new, wide band of about 10,000 bp. This result indicates that the OriS 472 bp fragment present in the BamHI-X may be part of a 10 large BamHI DNA fragment. The ladder pattern of BamHI-N fragment with multiple repeats of 472 bp OriS is the same as in HSV-1 HFEM (Fig. 7 Ba). The US 12 probe (present in the US DNA) detected only the BamHI-X band in HSV-1 F and its recombinants 601 and 602 (Fig. 7 Bb). The probe detected the ladder of bands in HFEM and recombinant R19. However, US 12 15 gene was not detected in HSV-1 R15. To study the molecular changes in the US and TRS DNA of HSV- 1 RI 5 the probes Y, X, Z, J1135, and JI in Southern blot analyses (Fig. 8 A, B). The results shown in Fig. 8B indicate the following: (a) Probe Y detected an 1840 bp fragment in HSV-1 Syn17 HFEM and 20 R15 DNAs; (b) Probe X detected a 1953 bp fragment in HSV-1 Syn17 and HFEM but not in R15; (c) Probe Z detected an 1841 bp fragment in HSV-1 Syn17 and HFEM but not in R15; 25 (d) Probe J1135 detected a 6400 bp fragment in HSV-1 Syn17 and HFEM but detected a -10000 bp fragment in HSV-1 R15; (e) Probe JI detected a 2055 bp fragment in Syn17, HFEM and R15 DNAs. These findings revealed that fragments BamHI-X+Z are missing from the 30 US and TRS DNA of HSV-1 R15. The HpaI-EcoR1 fragment (coordinates WO 01/09361 PCT/ILOO/00469 -35 141611-146693) was cloned in pGEM-7 vector (Promega). The cloned DNA fragment in the pGEM-2 was identified in bacterial extracts with the probes J1135 and OriS and the cloned viral DNA was sequenced in an automatic sequencer. 5 Example 13 The nucleotide sequence of HSV-1 R15 DNA fragment Hpal-EcoRI (coordinates 141611-146693) revealed rearrangement 10 The nucleotide sequence of the HSV-1 R15 DNA fragment of 4182 bp is presented in Fig. 9. By comparison to the nucleotide sequence of HSV-1 Syn17 US and TRS DNA it was possible to identify the molecular rearrangements in HSV-I R15 DNA as shown in Fig. 10 as follows: (a) The sequence EcoR1 (coordinates 146693) near the start of the 15 TRS sequence (145583) in Syn17 is unchanged in the HSV-1 R15 DNA fragment. This sequence is identical but in the opposite orientation to the sequence in the IRS coordinates 131534-132605. (b) The DNA fragment from US DNA of HSV-1 Syn.17 coordinates 132605-134892 was found in HSV-1 R15 DNA fragment in an 20 opposite orientation ligated to the start of the TRS coordinate 145583-142046. (c) The HSV-1 Syn17 DNA sequence coordinates 141611-14204 is changed in HSV-1 R15 DNA. (d) HSV-1 R15 DNA contains two tandem repeats of the 472 bp 25 sequence that contains the OriS sequence. The sequence of HpaI-EcoR1 (coordinates 141611-146693) of HSV-1 Syn17 is 5082 bp while the HSV-1 R15 DNA fragment HpaI-EcoR1 is 3710 bp the cloned DNA fragment of HSV- 1 R15 is 4182 bp with two repeats of 472 bp. Since the HSV-1 Syn17 has only one 472 bp sequence, the relevant size of the 30 cloned HSV-1 R15 fragment is 3710 bp. Therefore, the HSV-1 RI5 US sequence WO 01/09361 PCT/ILOO/00469 -36 is shorter than the same sequence in HSV-1 Syn17 US DNA by 1372 nucleotides (Fig 11). Example 14 Rearrangements of the genes in the IRS-US-TRS DNA of 5 HSV-1 R15 The molecular changes that were identified in HSV-1 R15 DNA had changed the organization of the viral genes are shown in Fig. 12 and are as follows 1o (a) US 1 gene (IE-4 gene coding for a nuclear phosphoprotein is duplicated and appears in IRS and TRS. (b) US 2 gene (ORF 291aa) is duplicated and appears in IRS and TRS. (c) US 8 gene (gE, 550aa in HSV-1 Synl7) in HSV-1 R15 codes for a shorter polypeptide of 188aa, identical to the N-terminus 170aa of 15 gE protein of HSV-1 Syn17. The truncated gE protein in HSV-1 R15 infected cells will not form a heterodimer with gI that is coded by US 7 and therefore HSV-1 R15 is incapable of infecting nerve cells 3 . (d) US 9, 10 and 11 genes (coding for tegument proteins) are deleted. 20 (e) US 12 gene (IE5) is deleted. Example 15 PCR test To be able to distinguish between HSV-1 R15 and pathogenic viruses a PCR test was developed using primers designed according to the charged 25 nucleotide sequence in the R15 US DNA. The results presented in Fig. 13 reveal that under the conditions of the reaction the primers allow amplification of 319bp DNA only from HSV-1 R15 DNA. The biological implications of the gene rearrangements in the IRS-US- TRS 30 DNA of HSV-1 R15.
WO 01/09361 PCT/ILOO/00469 -37 The molecular changes in the genes markedly modify the biological properties of HSV-1 RI5 that lead to its apathogenicity. Example 16 Effects of deletion of US 12 on HSV-1 R15 immunogenicity in 5 mice The US 12 gene codes for ICP 47 that binds to and inhibits the transport of nonapeptides by TAP l/TAP2 dimers to HLA (MHC) class I polypeptides in the endoplasmic reticulum (ER) of infected cells . In the absence of ICP 47 in 10 HSV-1 R15 infected cells, the transport of viral nonapeptides to HLA class I molecules is not affected and therefore the induction of the host (human) immune system will start immediately after immunization with HSV-1 R15. Fig. 14 compares the results of FACS analyses that determine the fluorescence of cells that were stained with fluorescent anti-HLA antibodies. The 15 fluorescence of HLA class I molecules present on the cell surface of human fibroblasts and fibroblasts infected with HSV-1 Syn17 or HSV-1 R15 strains, determines the transport of HLA class I molecules from the cytoplasm to the cell surface during the early stage of viral infection. It was found that between 2 hr.p.i. to 4.5 hr.p.i. (the time of ICP47 activity), the fluorescence of the HLA 20 class I molecules on the outer cell membrane of fibroblasts infected with HSV-1 Syn17 was -50% lower than in cells infected with HSV-1 R15. This result indicated that HSV-1 R15 from which the US 12 gene was deleted is unable to inhibit the HLA class I translocation to the cell surface. Thus, the presentation of viral nonapeptide antigens by HLA class I molecules to the immune system is 25 unaffected contrary to pathogenic HSV-1 Syn17 that inhibits translocation of HLA class I molecules to the cell membrane. Confocal microscopy of HeLa cells that were infected with HSV-1 F, HFEM and R15, fixed at 3 and 6 hr p.i. and stained with antibodies to human HLA class I molecules revealed that in HeLa cells infected with HSV-1 F or 30 HFEM the HLA class I molecules were retained in the cell cytoplasm and were WO 01/09361 PCT/ILOO/00469 -38 almost absent from the outer cell membrane. In R15 infected cells HLA class I molecules were evenly distributed on the outer cell membrane (not shown). Confocal microscopy of HeLa cells infected with HFEM, Synl7 or HSV-1 R15 and treated with rabbit antibodies prepared against a synthetic polypeptide 5 derived from ICP47 amino acid sequence, revealed that ICP47 is absent from HSV- 1 R15 infected cells. Inhibition of HLA class I translocation occurs in cells infected with HFEM or Syn17 (not shown). Example 17 The deletion in the US 8 gene prevents HSV-1 R15 from 10 infecting neurons in mice In the absence of US 8 gene expression, the complex gE/gI cannot be formed, hence HSV-1 R15 is unable to penetrate into the nervous system of infected mice. It was reported(3) that glycoprotein gE/gI heterodimer facilitates 15 neuron to neuron spread of pathogenic HSV-1 strains. The inability of HSV-1 R15 to infect the nervous system of infected mice is one of the molecular changes that are responsible for the apathogenicity of this recombinant. Example 18 The deletion of US 9, US 10 and US 11 genes does not affect the 20 replication of HSV-1 R15 in the mouse nose epithelium, skin and CNS These genes code for yi tegument proteins: (a) US 9 codes for the synthesis of tegument phosphorylated protein, 25 (b) US 10 codes for another tegument protein. US 11 codes for a tegument protein that binds the 60 S ribosomal subunits in infected cells and also binds to mRNA transcripts of the gene UL 34 (membrane-associated phosphorylated virion protein). It was observed that HSV-1 R15 replicates in vivo cells to titers of 108 30 pfu/ml indicating that the deletion of the three tegument genes does not affect virus replication in cell cultures in agreement with published results"). The ability WO 01/09361 PCT/ILOO/00469 -39 of HSV-l R15 to replicate to high titers in cultured cells assures the production of this virus for vaccine purposes. Example 19 Modifications in the expression of UL54 and y1 3 4
.
5 genes in the 5 UL and Internal Repeat of UL (IRL), respectively, of HSV-1 R15 DNA Figure 15 presents a map of the HSV-1 Syn17 genes that are located near and in the BamHI B DNA fragment: UL 53, UL54, UL 55 and UL56 latency 10 genes that code for LATs mRNA, IE 110 gene and the y 134 .5 gene that codes for ICP 34.5. A 4Kbp deletion in the 5' end of the IRL was identified in the DNA genome of HSV-1 HFEM (the parental virus of HSV-1 R15). Since the HSV-1 R15 DNA genome resulted from a recombination between HSV-1 HFEM DNA 15 and BamHI B DNA fragment from HSV- 1 F. It was decided to study two genes near the recombination sites that are important to the pathogenicity of HSV-1: UL 54 and yi 3 4 .5 genes in HSV-R15 DNA (Fig. 15). Example 20 Absence of detectable ICP27 (IE-2 protein) coded by UL 54 in 20 HSV-1 R15 infected cells The UL 54 codes for ICP27 (IE-2) protein of HSV- 1 that shuttles between the cytoplasm and the nucleus of infected cells( 6 > Anti-ICP27 rabbit antibodies were prepared in the laboratory and used to 25 detect ICP27 protein in HSV- I infected cells by confocal microscopy. HeLa cells infected with HSV-1 F but not with HSV-1 R15 revealed the presence of ICP27 protein cytoplasm and nucleus of the infected cell (not shown). Since the ICP27 protein was not detected in HSV-1 R15 infected cells we cloned the UL54 gene in pCi expression vector (Promega) was cloned. The 30 pCi-UL 54 plasmid was transfected into cell-line 293 and stained with the anti-ICP27 antibodies. It was found that in the transfected cells the UL 54 gene of HSV-1 R15 was expressed and ICP27 was detected by the rabbit anti-ICP 27 WO 01/09361 PCT/ILOO/00469 -40 antibodies. In addition, the nucleotide sequence of the UL54 gene promoter was cloned, sequenced and was found to be identical to the promoter sequence of the UL 54 gene promoter in HSV-1 Syn 17. Since ICP27 was not detected in HSV-1 R15 infected cells while the 5 UL54 gene was expressed when cloned in an expression vector. It may be possible that the UL54 gene expression in the infected cells is under influence of or regulated by other genes. Example 21 The expression of the y1 3 4
.
5 gene in HSV-1 R15 infected cells as 10 compared to the pathogenic viruses HSV-1 Syn17 and HFEM The y1 34 .5 gene in the IRL of HSV-1 DNA codes for two proteins: The ICP 34.5 and ORF B (Fig. 15). The ICP 34.5 is responsible for the CNS pathogenicity of HSV-1 when injected intracerebrally ( 7 . To detect ICP 34.5 in 1s infected cells, a rabbit antibody was prepared against a peptide derived from the amino acid sequence of the protein coded by the yi 34 .5 gene. By Western blot analysis the ICP 34.5 (43 KDa) was detected in HSV-1 F infected cells while in HSV- I Syn 17 and HFEM infected cells the ICP 34.5 has a MW of 37KDa. (Fig. 16). The HSV-I recombinants 601 and 602 that contain inserts of the bacterial 20 LacZ gene in the two alleles of the y1 34 .5 genes in the TRL and IRL did not express the y1 34 .5 gene. The Western blot of ICP 34.5 in HSV-1 R15 infected cell homogenate gave an unclear result due to the unspecific staining of cellular proteins. It is suggested that y1 34 .5 was expressed at a lower level than in cells infected by 25 HSV-1 HFEM or Syn 17. Example 22 Survival of mice immunized with HSV-1 R1 recombinant through ocular skin or lungs route after challenge with the pathogenic HSV-1(F) 30 Sabra mice were immunized with HSV-1 R15 recombinant (30 L from a stock of 107 pfu/ml) by 3 different routes: (1) infection of the eyes (10 mice); WO 01/09361 PCT/IL00/00469 -41 (2) subcutaneous infection in the skin (10 mice); and (3) and infection to the lungs of 10 mice that were slightly anesthetized. Two weeks later all three groups of mice were infected with the pathogenic HSV-1(F) (30 [Il from 10 7 pfu/ml stock) by the nasal route. The 5 animals were followed for three weeks and the survival of the immunized mice and the control mice (injected with 30 VL of an uninfected cell homogenate by the same route of infection as the mice that were immunized) was documented, the results are shown in Fig. 17A, 17B and 17C. 10 Results 22.1 Immunization of Sabra mice by the ocular route Fig. 17A revealed that 90% of the R15 immunized mice survived the challenge with HSV-1 (F). About 50% of the control mice survived the challenge virus. This may be taken to indicate that the challenge virus 15 HSV-I (F) may not have infected half of the mice since in the two additional control mice groups the survival rate was 30% (see Fig. 17C) and 20% (Fig. 17D). 22.2 Immunization of Sabra mice by the subcutaneous route 20 Fig. 17B shows that injection of R15 subcutaneously to the mouse skin fully (about 100%) protects the mice from a challenge with pathogenic HSV-1 (F). Of the control group only 30% of the mice survived. 25 22.3 Immunization of mice by the lung route Fig. 17C revealed that inhalation of R15 into the anesthasized mice fully protected the mice from intranasal challenge with HSV-1 (F) . The control group succumbed to the infection and only 20% of the mice survived. 30 WO 01/09361 PCT/ILOO/00469 -42 Conclusions it is concluded that HSV-1 R15 recombinant protects mice against challenge with HSV-1 F when immunized by the ocular, by the skin and the lung routes. 5 Example 23 HSV-1 R15 UL54 gene is not expressed in infected cells The UL54 gene of pathogenic HSV-1 strains F and Syn17 is expressed early (2-4 hrs post infection) and codes for the viral Immediate Early Protein designated ICP27. This protein causes rearrangements of molecules in the 10 nucleus of the infected cells. In the previous example it was demonstrated that in HSV-1 R15 UL54 gene is not functional. In the present experiment HEK293 cells were treated with uninfected cell homogenate (Fig. 18 Mock) and infected HEK 293 cells treated with HSV-I R15 (Fig 18, R15) or HSV-1 (F) (Fig. 17F). Antibodies were raised in rabbits against IS a synthetic peptide attached to KLH. The rabbits' sera was obtained and the antiICP27 antibodies were used to stain the control and the virus infected cells. Results It can be seen in Fig. 18 in HEK cells infected with HSV- 1 (F) the cells 20 were stained with the immune serum indicating that ICP27 protein was synthesized from the UL54 gene transcript. However, in the cells that were infected with HSV-i R15 the viral protein ICP27 was missing. The control cells were negative. The results indicate that the HSV- 1 RI 5 recombinant is unable to synthesize mRNA from Immediate Early gene UL54. 25 WO 01/09361 PCT/ILOO/00469 -43 Example 24 Effects of apathogenic HSV-1 R15 recombinant injected by the intracerebral route on the brain functions and behavior of infected rats 5 Behavioral studies: Aggressive behavior was assessed 3 days post-infection by examining the responsiveness of the animal to cage opening and insertion of a gloved hand into the cage. Aggression was scored on a scale of 0-2 as follows: 0=no response; l=overt startle response and attempt to attack the hand; 2=extreme irritability, 10 fierce attack and attempt to bite the hand and /or jump out of the cage. Startle reaction was observed in response to scratching the cage. It was previously shown that immunization with R15 fully protected both mice and rats from lethal doses of virulent strains. In this experiment it was examined whether immunization with R- 15 may protect the rats from the clinical 15 signs of acute infection with virulent HSV-1 and whether acute or chronic infection with R-15 have any clinical implications. For this purpose, the following parameters were monitored: body temperature; aggressive behavior; and brain prostaglandin E2 (PGE2) synthesis in 5 experimental groups as follows: 20 1. Control uninfected rats II. Rats inoculated intracerebroventricularly (ICV) with 5 x 105 pfu HSV-1 strain Syn 17+. III. Rats inoculated ICV with 5x10 5 pfu R-15 IV. Rats that were immunized by two subcutaneous inoculations with 25 5x105 pfu R-15 at 2 weeks difference and examined 2 weeks after the second immunization/ V. Rats that were immunized by two subcutaneous inoculations with 5x10 5 pfu R-15 at 2 weeks difference and then challenged with a highly lethal dose of 106 pfu Syn 17+ administered ICV. 30 WO 01/09361 PCT/ILOO/00469 -44 Results The results of this experiment are given in Table 6. As can be seen acute ICV inoculation with syn17+ caused significant hyperthermia and aggressive behavior as well as increased production of PGE 2 in the brain. Acute ICV 5 inoculation with R-15 or s.c. immunization with R-15 did not induce any rise in body temperature, or PGE 2 production or aggressive behavior different than that observed for control animals. Immunization with R- 15 fully protected the animals from the Syn17+ induced aggressive behavior. These animals responded to this ultimate ICV challenge with syn 17+ by intermediate values of body temperature 1o and PGE 2 production between the control and Syn 17+ infected animals. Conclusion Although HSV-1 R15 recombinant, when injected intracerebrally, replicates in the brain it does not affect the normal behavior of the infected rats 15 and does not kill them. This is another marker of the apathogenicity of HSV-1 R15 recombinant since infection with the pathogenic HSV-1 (F) makes the rats very aggressive until they die of the infection. Example 25 Defining the target cells in the rat brain in which HSV-1 R15 20 replicates One step replication of R-15 in purified primary newborn rat glial cultures: Figure 19 shows that R-15 replicates to 1-2 log lower titers than virulent strains. This attenuated replication in brain cells is comparable to that in other cells types. 25 The virulent HSV- 1 strain Syn 17+ induced interleukin- 1 p gene expression in infected astrocytes as determined by RT-PCR (Figure 20 first line on left). In correlation, this virulent strain caused translocation of NFKB to the nucleus in the astrocytes. In comparison, strain R-15 did not induce IL-1p gene expression (Figure 20) 30 WO 01/09361 PCT/ILOO/00469 -45 Conclusions HSV-1 R15 recombinant and progeny from brain cells is by two logs lower than the progeny of a pathogenic HSV- 1 The later induces the transcription of the gene for IL 1P while HSV-2 R15 is unable to induce IL-1p gene. 5 WO 01/09361 PCT/ILOO/00469 -46 Table 1 A. Pathogenicity of different HSV- 1 strains to adult mice Virus strain Genetic modification N of exp. N of mice % of mortality F w.t 13 118 100 KOS w.t 1 9 100 Syn17 w.t 1 5 100 R19 recombinant of HFEM 6 53 >50 P42 genome with BamH-B 1 5 100 DNA from F P71 recombinant of R15 genome 1 5 100 with UL53 DNA from R19 F blue recombinant of R15 genome 6 64 0 with UL53 DNA from R19 F TK- LacZ inserted into UL56 gene 1 9 0 of HSV-1 (F) KOS TK TK~ mutant 1 9 33 Syn 17 TK~ TK~ mutant 1 5 0 F blue TK TK~ mutant 1 16 0 R15 TK~ TK~ mutant 1 9 0 HFEM TKmutant 4 50 0 R15 w.t., with a 4ktb deletion in 6 86 0 BamHI-B fragment Vhs recombinant HFEM genome 2 18 0 with BamH-B DNA from F UL4I mutant WO 01/09361 PCT/ILOO/00469 -47 Table 1B. Pathogenicity of different HSV- 1 strains to suckling mice Virus strain Genetic modification N of exp. N of mice % of mortality HFEM w.t. with a 4 kbp deletion 2 14 100 in BarnHI-B fragment HFEM TK~ TK-mutant 1 10 10 R15 Recombinant of HFEM genome 4 67 4* with BamH-B fDNA from F F blue LacZ inserted into UL56 gene 2 15 6* of HSV-1 (F) F blue TK~ TK-mutant 1 7 0 5* Six and four suckling mice died 1-2 days after infection with HSV-l F blue and RI 5, respectively, possibly due to rejection by the mothers.
WO 01/09361 PCT/ILOO/00469 -48 Table 2. Distribution of HSV-1 DNA in brain of adult mice after intranasal immunization in comparison with the apathogenic strain HSV-1 vhs (UL41~) 5 A. HSV- 1 RI 5 recombinant: 2 days p.i. 4 days p.i. 7 days p.i. Sample Tissue Viral Sample Tissue Viral Sample Tissue Viral number DNA number DNA number DNA I N.E. + 5 N.E. + 9 N.E. 2 OB - 6 OB - 10 OB 3 Am - 7 Am - 11 Am 4 TG - 8 TG - 12 TG B. HSV-1 vhs (UL41~) 2 days p.i. 4 days p.i. 7 days p.i. Sample Tissue Viral Sample Tissue Viral Sample Tissue Viral number DNA number DNA number DNA I N.E. + 5 N.E. + 9 N.E. 2 OB + 6 OB + 10 OB + 3 Am - 7 Am - 11 Am 4 TG - 8 TG 12 TG WO 01/09361 PCT/ILOO/00469 -49 Table 3: HSV-1 R15 does not penetrate into the spinal cord and adrenal glands after infection in the mouse foodpad skin. Time after infection 2 days 4 days Virus strain F R15 F R15 Foodpad + + + Spinal cord - - + Adrenal gland - - + - WO 01/09361 PCT/ILOO/00469 -50 Table 4 Pathogenicity of HSV- 1 in mouse strain A/Ja which were inoculated intracerebrally (50 pl/animal) or intraperitoneally) 5 Virus strain" PFU of No. animals dead/ Sign of Days of death inoculated No. of animals illness at Post infection virus/animal infected 1 st to 3 rd [No. of animals] (% survival) days post infection A: Intracerebrallv HSV-R-Fehx-C15 1.0 x 106 0/10 (100) 10/10 HSV-R-Fehx-C15 2.0 x 105 0/10 (100) 9/10 HSV-R-Fehx-C15 3.0 x 10 4 1/10 (90) 9/10 6[l] HSV-R-Fehx-C 15 4.0 x 10' 0/10 (100) 6/10 HSV-R-Fehx-C15 5.0 x 102 0/10 (100) 4/10 HSV-R-Fehx-C15 6.0 x 10' 0/10 (100) 2/10 Mock (50 t BME) 0/10 (100) 0/10 HSV-I-F 1.0 x 10 2 10/10 (0) 10/10 3121,4111 5151,7121 HSV-1 HFEM 1.0 x 102 10/10 (0) 10/10 6111,7141,9131 I, 12111 B: Intraperitoneally HSV-R-Fehx-C15 1.0 x 107 0/10 (100) 2/10 HSV-R-Fehx-C15 2.0 x 106 0/10 (100) 1/10 HSV-IF 1.0 x 10 6 9/10 (10) 4/10 6111,7151,8121, 13111 HSV-1 HFEM 1.0 x 10 7 0/10 (100) 0/10 C: Intranasal 27.10.1996 HSV-R-Fehx-C15 1.0 x 106 0/10 (100) 0/10 HSV-1 F 1.0 x 106 3/10 (70) 10/10 10111,12111,1611| " Mice A/J strain were infected at the age of four weeks (32 days), animals were purchased by Harlan-Winkelmann GmbH, D-33178 Borchen, Germany. HSV-1 strains were propagated on CV-1 cell cultures. 10 WO 01/09361 PCT/ILOO/00469 -51 Table 5: Inhibition of HSV-1 RI5 and HFEM plaque formulation By acyclovir Virus strain Acyclovir No. of % Inhibition concentration ( g/ml) plaques/plate HFEM 0 100 0 10 10 90 50 0 100 100 0 100 R15 0 175 0 10 0 100 50 0 100 100 0 100 5 Table 6: ICV inoculation with R- 15 does not induce aggressive behavior, fever or increased PGE2 production above control levels. Immunication with R- 15 protects rats 10 from the behavioral changes induced by an ICV challenge with strain Synl7+ Immunization Acute Aggression Mean rectal Ex-vivo Ex-vivo infection index score temperature PGE2 PGE2 production production (Cortex) No Synl7 ' 1.6 ±0.4 39.0 0.5 249 ±50 220 ±53 immunization ICV Immunization Syn17* 0 38.2 0.4 166 19 199 56 with R-15 ICV No R-15 0 36.9 0.4 100 25 104 27 immunization ICV Immunization Vehicle 0 36.8 0.4 94 16 123 20 with R- 15 No Vehicle 0 36.4 0.4 80 35 91 28 immunization WO 01/09361 PCT/ILOO/00469 -52 REFERENCES 1. Rosen, A., Ernst, F., Koch, H-G., Gelderblom, H., Darai, G., Hadar, J., Tabor, E., Ben-Hur, T. and Becker, Y. Replacement of the deletion in 5 the genome (0.762-0.789 mu) of avirulent HSV-1 HFEM using cloned MluI DNA fragment (0.7615-0.796 mu) of virulent HSV-1 F leads to generation of virulent intratypic recombinant. Virus Res. 5:157-175 (1986). 2. Ben-Hur T., Rosenthal J., Itzik A. and Weidenfeld J. Rescue of HSV-1 to neurovirulence is associated with induction of brain interleukin-1 expression, prostaglandin synthesis and neuroendocrine responses. J Neurovirol 2:279-288, (1996). 3. Dingwell K.S., Doering L.C., and Johnson D.C. Glycoproteins E. and I facilitate neuron-to-neuron spread of Herpes simplex virus. J. Virol. 15 69:7087-7098, (1995). 4. Neumann L., Kraas W., Nebel S., Jung G., and Tampe R. The active domain of the Herpes Simplex virus protein ICP 47: A potent inhibitor of the transporter associated with antigen processing (TAP). J. Mol. Biol. 272:484-492, (1997). 20 5. Nishiyama Y., Kurachi R., Daikoku T., and Umene K. The US 9, 10, 11 and 12 genes of Herpes simplex virus type 1 are of no importance for its neurovirulence and latency in mice. Virology 194:419-423, (1993). 6. Mears W.E. and Rice S.A. The Herpes simplex virus immediate early protein ICP 27 shuttles between nucleus and cytplasm. Virology 25 242:128-137, (1998). 7. He B., Gross M. and Roizman B. The 134.5 protein of herpes simplex virus-i complexes with protein phosphatase la to dephosphorylate the a subunit of the eukaryotic translation initiation factor 2 and preclude the shutoff of protein synthesis by double stranded RNA-activated protein 30 kinase. Proc. Nati. Acad. Science USA 94:843-848, (1997).
Claims (24)
1. A recombinant herpes simplex virus, the genome of which comprises a mutant of the genome of HSV- 1, with the following alterations: a deletion or mutation in the unique small (US) 8 gene region resulting 5 either in expression of a non-functional gE protein or in no expression of the gE protein; and a deletion or mutation in the US 12 gene (IE-5) region resulting either in expression of a non-functional ICP47 protein or in no expression of the ICP 47 protein. 1o
2. A recombinant virus according to Claim 1, further comprising a mutation or deletion in at least one of US 9, US 10 or US 11, said mutation or deletion resulting either in production of a non-functional expression product of the respective gene, or in no expression of the product.
3. A recombinant virus according to Claim 2, comprising a mutation or 15 deletion in US 9, US 10 and US 11.
4. A recombinant virus according to Claim 3, comprising deletion of the full sequence of US 9, US 10 and US 11.
5. A recombinant virus according to Claim 1, comprising a deletion of the full sequence of US 12. 20
6. A recombinant virus according to Claim 1, wherein the US 8 region is mutated by reverse splicing and recombination resulting in an expression product of said region being a non-functional expression product identical to the N'-tenninal amino acids of gE protein of HSV-1 Syn17.
7. A recombinant virus according to any one of the preceding claims, 25 comprising a duplication of the sequence of at least one of US 1 or US2.
8. A recombinant virus according to Claim 7, comprising a duplication of both US 1 and US 2 genes.
9. A recombination virus according to Claim 8, wherein US 1 and US 2 appear both in the TRS and TR5 regions. WO 01/09361 PCT/ILOO/00469 -54
10. A recombinant virus according to any one of the preceding claims, having a non-functional or featuring non-expressing of at least one of the proteins: ICP27 or ICP34.5.
11. A recombinant virus according to Claim 10, featuring essentially no 5 expression of ICP27 and 1CP34.5
12. A recombinant virus according to any one of the preceding claims, having an UL23 gene coding for a physiologically active tyrosine kinase (TK).
13. A recombinant virus according to Claims 1 to 12, as depicted in Fig. 10.
14. A recombinant virus according to Claims 1 to 13, further comprising a 10 heterologous sequence.
15. A recombinant virus according to Claim 14, wherein the heterologous sequence is inserted in the position of the genes US 9, US 10, US 11 or US 12.
16. A recombinant virus according to Claim 14, wherein the heterologous sequence is selected from the group consisting of: 15 (a) a sequence coding for an immunogenic protein from human herpes virus 2; (b) a sequence coding for an immunogenic protein from human herpes virus 3; (c) a sequence coding for an immunogenic protein from human herpes virus 4; (d) a sequence coding for an immunogenic protein from human herpes virus 5; (e) a sequence coding for an immunogenic protein from human herpes virus 6; 20 (f) a sequence coding for an immunogenic protein from human herpes virus 7; and (g) a sequence coding for an immunogenic protein from human herpes virus 8.
17. A recombinant virus according to Claim 14, comprising as a heterologous sequence a cytotoxic gene. 25
18. A recombinant virus according to Claim 14, comprising as a heterologous sequence an apoptosis gene.
19. An anti HSV-1 vaccine comprising as an active ingredient a recombinant virus according to any one of Claims 1 to 13, optionally together with an immunologically acceptable carrier. WO01/09361 PCT/ILOO/00469 -55
20. An anti-HSV-1 vaccine according to Claim 19, further comprising a recombinant virus according to Claims 14 to 18.
21. An anti-HSV-1 vaccine according to Claim 20, further comprising recombinant virus according to Claim 16. 5
22. An anti herpes vaccine comprising as an active ingredient a recombinant virus according to Claim 16.
23. A pharmaceutical composition of gene therapy comprising as an active ingredient a recombinant virus according to Claim 14, 17 or 18.
24. A pharmaceutical composition for the treatment of astrocytoma brain tumor 10 and/or solid tumors in other organs, comprising as an active ingredient any one of the recombinant virus of Claims 1-14, 16 or 17.
Applications Claiming Priority (3)
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IL13121299A IL131212A0 (en) | 1999-08-03 | 1999-08-03 | Recombinant virus and live-virus vaccines |
IL131212 | 1999-08-03 | ||
PCT/IL2000/000469 WO2001009361A1 (en) | 1999-08-03 | 2000-08-03 | Recombinant hsv-1 and live viral vaccines |
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AU63130/00A Abandoned AU6313000A (en) | 1999-08-03 | 2000-08-03 | Recombinant hsv-1 and live viral vaccines |
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JP (1) | JP2003505103A (en) |
AU (1) | AU6313000A (en) |
CA (1) | CA2381056A1 (en) |
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WO (1) | WO2001009361A1 (en) |
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CN113710259A (en) * | 2019-03-14 | 2021-11-26 | 国家儿童医院研究所 | Syncytial oncolytic herpes simplex mutants as effective cancer therapies |
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US7223593B2 (en) | 2000-01-21 | 2007-05-29 | Biovex Limited | Herpes virus strains for gene therapy |
US20030165434A1 (en) * | 2001-04-20 | 2003-09-04 | Chiron Corporation | Delivery of polynucleotide agents to the central nervous system |
JP2004099584A (en) * | 2002-05-02 | 2004-04-02 | Keio Gijuku | Antitumor agent using hsv |
US7592169B2 (en) | 2003-04-25 | 2009-09-22 | Medimmune, Llc | Methods and compositions for treatment and prevention of HSV-2 infections and conditions |
US8865185B2 (en) | 2006-09-08 | 2014-10-21 | The Trustees Of The University Of Pennsylvania | Methods of use for HSV-1 and HSV-2 vaccines |
US8871223B2 (en) | 2006-09-08 | 2014-10-28 | The Trustees Of The University Of Pennsylvania | HSV-1 and HSV-2 vaccines and methods of use thereof |
US10478490B2 (en) | 2006-12-28 | 2019-11-19 | The Trustees Of The University Of Pennsylvania | Herpes simplex virus combined subunit vaccines and methods of use thereof |
CN101616688B (en) | 2006-12-28 | 2013-12-11 | 宾夕法尼亚大学理事会 | Herpes simplex virus combined subunit vaccines and methods of use thereof |
US8057804B2 (en) | 2006-12-28 | 2011-11-15 | The Trustees Of The University Of Pennsylvania | Herpes simplex virus combined subunit vaccines and methods of use thereof |
CN102657861A (en) * | 2010-08-16 | 2012-09-12 | 郑州金森生物科技工程有限公司 | Herpes simplex virus I-type gene recombinant attenuated live vaccine and preparation method thereof |
CA2846372C (en) | 2011-09-08 | 2021-01-12 | New York University | Oncolytic herpes simplex virus and therapeutic uses thereof |
US10967015B2 (en) | 2015-06-15 | 2021-04-06 | New York University | Method of treatment using oncolytic viruses |
CN111635913B (en) * | 2020-06-16 | 2022-03-04 | 广东东阳光药业有限公司 | Construct and application thereof |
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GB9102126D0 (en) * | 1991-01-31 | 1991-03-13 | Smithkline Beecham Biolog | Novel vaccine |
US5804413A (en) * | 1992-07-31 | 1998-09-08 | University Of Pittsburgh Of The Commonwealth System Of Higher Education | Herpes simplex virus strains for gene transfer |
US5998174A (en) * | 1997-05-12 | 1999-12-07 | University Of Pittsburgh Of The Commonwealth System Of Higher Education | Multigene vectors |
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CN113710259A (en) * | 2019-03-14 | 2021-11-26 | 国家儿童医院研究所 | Syncytial oncolytic herpes simplex mutants as effective cancer therapies |
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