AU6213600A - Methods for determining the specificity and sensitivity of oligonucleotides for hybridization - Google Patents

Methods for determining the specificity and sensitivity of oligonucleotides for hybridization

Info

Publication number
AU6213600A
AU6213600A AU62136/00A AU6213600A AU6213600A AU 6213600 A AU6213600 A AU 6213600A AU 62136/00 A AU62136/00 A AU 62136/00A AU 6213600 A AU6213600 A AU 6213600A AU 6213600 A AU6213600 A AU 6213600A
Authority
AU
Australia
Prior art keywords
oligonucleotides
hybridization
specificity
sensitivity
determining
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU62136/00A
Inventor
Julja Burchard
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Rosetta Inpharmatics LLC
Original Assignee
Rosetta Inpharmatics LLC
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Rosetta Inpharmatics LLC filed Critical Rosetta Inpharmatics LLC
Publication of AU6213600A publication Critical patent/AU6213600A/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6811—Selection methods for production or design of target specific oligonucleotides or binding molecules
AU62136/00A 1999-07-16 2000-07-14 Methods for determining the specificity and sensitivity of oligonucleotides for hybridization Abandoned AU6213600A (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US14438299P 1999-07-16 1999-07-16
US60144382 1999-07-16
US15456399P 1999-09-17 1999-09-17
US60154563 1999-09-17
PCT/US2000/019203 WO2001006013A1 (en) 1999-07-16 2000-07-14 Methods for determining the specificity and sensitivity of oligonucleotides for hybridization

Publications (1)

Publication Number Publication Date
AU6213600A true AU6213600A (en) 2001-02-05

Family

ID=26841955

Family Applications (1)

Application Number Title Priority Date Filing Date
AU62136/00A Abandoned AU6213600A (en) 1999-07-16 2000-07-14 Methods for determining the specificity and sensitivity of oligonucleotides for hybridization

Country Status (5)

Country Link
EP (1) EP1200625A1 (en)
JP (1) JP2003505038A (en)
AU (1) AU6213600A (en)
CA (1) CA2379212A1 (en)
WO (1) WO2001006013A1 (en)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7047141B2 (en) * 2001-03-22 2006-05-16 Ge Healthcare Bio-Sciences Ab Ratio-based oligonucleotide probe selection
CA2451074C (en) 2001-06-18 2014-02-11 Rosetta Inpharmatics, Inc. Diagnosis and prognosis of breast cancer patients
US7171311B2 (en) 2001-06-18 2007-01-30 Rosetta Inpharmatics Llc Methods of assigning treatment to breast cancer patients
KR100442839B1 (en) * 2001-12-15 2004-08-02 삼성전자주식회사 Method for scoring and selection for optimum probes in probes design
KR100450816B1 (en) * 2002-03-06 2004-10-01 삼성전자주식회사 Selection method of probe set for genotyping
EP1479780A1 (en) * 2003-05-22 2004-11-24 Institut Pasteur A novel design of probes for saccharomyces cerevisiae which minimizes cross-hybridization, the obtained probes and diagnostic uses thereof
WO2005090565A1 (en) * 2004-03-19 2005-09-29 Toyobo Co., Ltd. Dna array and method of detecting single nucleotide polymorphism
US20050233339A1 (en) * 2004-04-20 2005-10-20 Barrett Michael T Methods and compositions for determining the relationship between hybridization signal of aCGH probes and target genomic DNA copy number
US8105777B1 (en) 2008-02-13 2012-01-31 Nederlands Kanker Instituut Methods for diagnosis and/or prognosis of colon cancer

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6040138A (en) * 1995-09-15 2000-03-21 Affymetrix, Inc. Expression monitoring by hybridization to high density oligonucleotide arrays
US6027890A (en) * 1996-01-23 2000-02-22 Rapigene, Inc. Methods and compositions for enhancing sensitivity in the analysis of biological-based assays
US6110676A (en) * 1996-12-04 2000-08-29 Boston Probes, Inc. Methods for suppressing the binding of detectable probes to non-target sequences in hybridization assays

Also Published As

Publication number Publication date
CA2379212A1 (en) 2001-01-25
JP2003505038A (en) 2003-02-12
WO2001006013A1 (en) 2001-01-25
EP1200625A1 (en) 2002-05-02

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase