AU2020102399A4 - An Analytical method for detecting activity of soil glutamine synthetase - Google Patents

An Analytical method for detecting activity of soil glutamine synthetase Download PDF

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AU2020102399A4
AU2020102399A4 AU2020102399A AU2020102399A AU2020102399A4 AU 2020102399 A4 AU2020102399 A4 AU 2020102399A4 AU 2020102399 A AU2020102399 A AU 2020102399A AU 2020102399 A AU2020102399 A AU 2020102399A AU 2020102399 A4 AU2020102399 A4 AU 2020102399A4
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Zhijie WU
Lili Zhang
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Institute of Applied Ecology of CAS
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Abstract

The invention relates to an analytical method for detecting the activity of glutamine synthetase in soil, which comprises the following steps : weighing an air-dried soil sample and fumigating with chloroform; adding 1 gram of each sample into n (n is more than or equal to 6) borosilicate test tubes, where 0.3-0.5ml of reaction solution is added into n/2 tubes, and 0.3-0.5ml of control solution is added into the other n/2 tubes; adding glutamine solution into all test tubes and oscillating the test tubes at room temperature by using a reciprocating oscillator then adding 4.0-4.8ml of termination solution to each; standing until solid particles are precipitated, then centrifuging the supernatant; carrying out colorimetric determination on the supernatant with a spectrophotometer; obtaining an absorbance value, and calculating the concentration of 5-N-hydroxyglutamyl amide in a measured solution according to the absorbance value and the slope. There are 4 advances about this invention: 1) first time determining the method for determining the glutamine synthetase in soil; 2) reducing the dependence on equipment requirements; 3) the method is high in accuracy and easy to operate; and 4) the result is stable and reliable and good in reproducibility.

Description

AUSTRALIA
PATENTS ACT 1990
PATENT SPECIFICATION FOR THE INVENTION ENTITLED:
An Analytical method for detecting activity of soil glutamine synthetase
The invention is described in the following statement:-
An Analytical method for detecting activity of soil glutamine synthetase
TECHNICAL FIELD
The invention relates to determination of glutamine synthetase activity in soil, in particular to an analytical method for detecting the glutamine synthetase activity in soil.
BACKGROUND
Glutamine synthetase in soil catalyzes the reaction between ammonia and glutamate to produce glutamine:
(M)2+
Glutamate+NH3+ATP , glutamine+ADP+Pi
GS
Nitrogen is the most important nutrient element for the growth and reproduction of microorganisms in soil, and bacteria and fungi can utilize a wide variety of organic and inorganic nitrogen compounds. The utilization ratio of organic nitrogen and inorganic nitrogen by microorganisms strongly affects the circulation of nitrogen in soil and the competition of microorganisms and plants for nitrogen. NH 4*is an inorganic nitrogen form which can be directly utilized in soil, and microorganisms have two mechanisms for utilizing the inorganic nitrogen, both resulting in the synthesis of glutamate by amination of alpha-ketoglutaric. One of these pathways is catalyzed by glutamine synthetase (E.C.6.3.1.2). Glutamine synthetase has stronger capture ability to NH 4* and stronger affinity (smaller Km value), so the enzyme is more effective when the concentration of NH4 * is lower. The determination of the activity of the enzyme is helpful for understanding the strength of microorganisms in different utilization ways of inorganic nitrogen, and has important significance for exploring the form of soil nitrogen.
SUMMARY
The invention aims to provide an analytical method for detecting the activity of glutamine synthetase in soil. The method is the first time to determine the activity of the soil glutamyl aminase, and the determination of different soil samples shows that the analysis result is accurate and reliable, and the analysis reproducibility is better.
In order to achieve the purpose, the technical scheme adopted by the invention is as follow:
The invention relates to an analytical method for detecting the activity of glutamine synthetase in soil,
1) Weighing an air-dried soil sample with a sieve of 2-4 mm, and fumigating the air-dried soil sample with chloroform;
2) Weighing 1 gram of fumigated soil in n (n >=6) borosilicate test tubes, wherein 0.3-0.5 ml of reaction solution is added to each of the n/2, and 0.3-0.5 ml of control solution is added to the other n/2;
3) Adding 1.5-1.8 ml of glutamyl amide solution (0.2 M) to all tubes.
4) Oscillating the test tubes at room temperature for 50 -70 minutes by using a reciprocating oscillator;
5) Adding 4.0 - 4.8 ml of termination solution after oscillating;
6) Standing for 3 minutes; taking 1.3 ml of supernatant for centrifugation after the solid particles are precipitated;
7) Taking 1ml of supernatant obtained after centrifugation;
8) Colorimetric at 540 nm with a spectrophotometer;
9) So as to obtain an absorbance value A;
10) Calculating the concentration S of 5-N-hydroxyglutamyl amide in the measured solution according to the absorbance value A and the slope b, S=A*b, wherein the concentration in the sample is defined A Si, and the concentration in the control is defined as S2;
11) The activity of glutamine synthetase in soil was calculated in units of mmol hydroxyglutamyl amide kg dry soil h-i.
The calculation formula is [ (S-S2)*V/1000]*V/W. T=mmol hydroxyglutamyl amide kg dry soil h 1 .
Wherein Si is the concentration (mmol/L) of the hydroxyglutamyl amide in the sample, S2 is the concentration (mmol/L) of the hydroxyglutamyl amide in the control, V is the total volume (mL) of the leaching solution, W is the weight (g) of the soil sample, 1000 is the unit conversion coefficient, and T is the culture time (h) of the soil sample.
The method of making the work standard curve comprises the following steps: 1) preparing a standard solution: weigh 1.621 g of 5-N-hydroxyglutaminamide and dissolve it in 1000 ml of pyrazole solution to obtain a standard stock solution with the concentration of 10 mmol/L; 2) suck 0, 1, 2, 3, 4 and 5 ml of the standard stock solution into a cuvette, and add 4.0 ml - 4.8 ml of termination solution, then fill all samples into 10 ml to obtain a series of concentration solutions with the concentration of 0, 1, 2, 3, 4 and 5 mmol/L, colorimetric reaction under the condition of 540 nm afterwards, then make the standard curve based on the absorbance and sample concentration to obtain the slope b.
The reaction solution as stated consists of 10.5 ml of pyrazole buffer (pH 7.15), 0.9 ml of hydroxylamine hydrochloride (800 Mm), 0.1 ml of MnCL2 1-4H 20 (100 mM), 1.4 ml of KH 2AsO 4(280 mM); 0.14 ml of adenosine diphosphate 5'monosodium glutamate (40 mM), and the control solution is made of 11.95 ml of pyrazole buffer (pH 7.15), 0.9 ml of hydroxylamine hydrochloride, 0.1 ml of MnCL2-4H20, 0.14 ml of adenosine diphosphate 5' monosodium glutamate while the stop solution is made of 21 ml of hydrochloric acid, 20 g of trichloroformic acid and 55 g of FeClr6H20 dissolved in I L of deionized water.
The measuring principle of the method
In soil, besides the function explained above, glutamine synthetase catalyzes a conversion reaction, which is insensitive to adenosine acylation in the presence of Mn2' and stable in enzyme activity, and easy to determine. The product of the reaction, hydroxyglutamyl amide, reacts with ferric chloride to form a red chemical substance, which can be colorimetric determined at 540 nm. Based on this conversion reaction, the activity of glutamine synthetase is determined.
ADP, arsenate, Mn2+,
Glutamate+hydroxylamine , 5-N-hydroxyglutamine+NH3
Glutamine synthetase
DESCRIPTION OF THE INVENTION
1. Reagent preparation:
1) Reaction solution: 10.5 ml of pyrazole buffer (pH 7.15), 0.9 ml of hydroxylamine hydrochloride, 0.1 ml of MnCL2-4H2O, 1.4 ml of KH2AsO 4 , 0.14 ml of adenosine diphosphate 5'monosodium glutamate (this reagent is sufficient to measure 25 samples);
2) Control solution: 11.95 ml of pyrazole buffer (pH 7.15), 0.9 ml of hydroxylamine hydrochloride, 0.1 ml of MnCL2-4H20, 0.14 ml of adenosine diphosphate 5'monosodium glutamate (this reagent is sufficient to measure 25 samples);
3) The termination solution: 21 ml of hydrochloric acid, 20 g of trichloroformic acid and 55 g of FeCl3-6H20 are dissolved in IL of deionized water;
4)Pyrazole (whether this should be pyrazole or not) buffer (100 mM): 6.82 g of pyrazole is weighed and dissolved in 1 L of water;
5)Hydroxylamine hydrochloride (800Mm): 55.6 g of hydroxylamine hydrochloride is weighed and dissolved in 1 L of pyrazole solution;
6) MnCl (100 mM): 19.8 g of MnCl-4H20 is weighed and dissolved in 1 L of pyrazole solution;
7) Potassium hydrogen arsenate solution (280 mM): 50 g of KH2AsO 4 is weighed and dissolved in 1 L of pyrazole solution;
8) Adenosine diphosphate 5' monosodium glutamate solution (40mM): 17.01g of adenosine diphosphate 5'monosodium glutamate is weighed and dissolved in IL of pyrazole solution;
9) L-glutamyl amide solution (0.2 M): 29.3 g of L-glutamine are dissolved in 1 L of pyrazole solution.
2. Standard curve is made: Standard solution: 1.621g of 5-N-hydroxyglutamyl amide is weighed and dissolved in 1000 ml of pyrazole solution to obtain a standard stock solution with a concentration of 10 mmol/L. 1, 2, 3, 4 and 5 milliliters of the solution are absorbed and added into a cuvette and 4.0 to 4.8 milliliters of the termination solution is added afterwards, then fill all the samples to 10 milliliters and a series of concentration solutions with the concentration of 0, 1, 2, 3, 4 and 5 ml/ml are obtained. Colorimetric determination is carried out under the condition of 540 nanometers and a standard curve of the obtained absorbance and the concentration of the samples is drawn, and the slope b is obtained.
The operation steps are as follows:
1) Sieving soil sample with 2 - 4 mm sieve, weighing n grams of soil sample, and fumigating with chloroform for 4 hours;
2) Weighing and adding n portions of fumigated soil in n borosilicate test tubes (16*100mm) and each tube is Ig, wherein three of the tubes are added with 0.5 ml of reaction solution, and the other three are added with 0.5ml of control solution;
3) 1.7 ml of glutamyl amide solution is added to all tubes;
4) The test tube is oscillated for one hour at room temperature by using a reciprocating oscillator;
5)4.4 ml of termination solution is added after oscillating;
6) After settling for a few minutes to have the solid particles precipitated, 1.3 ml of supernatant is centrifuged (15000 rev min-1 , 1 min);
7) Taking 1ml of supernatant obtained after centrifugation;
8) Colorimetric at 540 nm by using a spectrophotometer;
9) So as to obtain an absorbance value A;
10) Calculating the concentration S of 5-N-hydroxyglutamamide in the determined solution according to the absorbance value A and the slope b, S=A*b, wherein the concentration in the sample is defined as Sl, and the concentration in the control is defined as S2
11) The activity of glutamine synthetase in soil was calculated in units of mmol hydroxyglutamyl amide kg dry soil h-1 .
The calculation formula is [(S-S2)*V/1000]/W.T=mmol hydroxyglutaminamide kg dry soil h 1 .
Wherein Si is the concentration (mmol/L) of the hydroxyglutamyl amide in the sample, S2 is the concentration (mmol/L) of the hydroxyglutamyl amide in the control, V is the total volume (mL) of the leaching solution, W is the weight (g) of the soil sample, 1000 is the unit conversion coefficient, and T is the culture time (h) of the soil sample.
Embodiment 1
The black soil used in this embodiment is collected from Helen ecological test station of the Chinese Academy of Sciences, and is provided with three different treatments: No. 1 is a control. It is the common soil which is cultured for more than 24 hours at 25°Cwithout any treatment and additive; No. 2 is the soil being added with a nitrification inhibitor DCD and cultured for more than 24 hours at 25°C; and No. 3 soil is added with a nitrification inhibitor DMPP and cultured for more than 24 hours at 25°C. The soil water content was 20% (air-dried soil weight). No.2 and No.3 soil are supplemented with nitrification inhibitors, both of which were 50 ppm. Glutamine synthetase activity in the three soils are tested by the means above.
The specific analytical steps of each soil are as follows:
1) Sieving soil sample with 2 - 4 mm sieve, weighing 6g soil sample, and fumigating with chloroform for 4hr;
2) Weighing and adding 6 portions of fumigated soil in 6 borosilicate test tubes (16*100mm), and each portion is Ig, wherein three of the six borosilicate test tubes are added with 0.5 ml of reaction solution, and the other three are added with 0.5ml of control solution);
3) 1.7 ml of glutamyl amide solution is added to all tubes;
4) The test tube is oscillated for one hour at room temperature by using a reciprocating oscillator;
5) 4.4ml of the termination solution is added after oscillating;
6) After settling for a few minutes to have the solid particles precipitated, 1.3 ml of supernatant is centrifuged (15000 rev min-1 , 1 min);
7) Taking 1ml of supernatant obtained after centrifugation;
8) Colorimetric at 540 nm by using a spectrophotometer;
9) So as to obtain an absorbance value A;
10) Calculating the concentration S of 5-N-hydroxyglutamamide in the determined solution according to the absorbance value A and the slope b, S=A*b, wherein the concentration in the sample is defined as S1, and the concentration in the control is defined as S2;
11) The activity of glutamine synthetase in soil was calculated in the unit of mmol hydroxyglutamyl amide kg dry soil 1 .
The test results are as follows:
Glutamine synthetase activity
(mmol of hydroxyglutamyl Difference
Dispose of Repeat amide kg of dry soil h) Stn significance deviation Measured (P<0.05) Mean value value
Repeat 1 2.2415
1 Repeat 2 2.3979 2.3334 0.0817 a
Repeat 3 2.3608
Repeat 1 4.1254
2 Repeat 2 4.1432 4.1748 0.0707 b
Repeat 3 4.2558
Repeat 1 3.5089
3 Repeat 2 3.6356 3.5600 0.0668 b
Repeat 3 3.5356
It can be seen from the data in the table that the activity of glutamine synthetase in soil significantly increased by adding nitrification inhibitor, and there was no significant difference between the second and third types of soil before adding nitrification inhibitor, which indicated that different types of nitrification inhibitor had little influence on the activity of glutamine synthetase in soil. The smaller standard difference showed that the deviation between the results of the analytical method was smaller, so as to the accuracy was higher and the reproducibility was good.
Embodiment 2
The three types of brown soil used for planting crops in this embodiment was collected at the Shenyang ecological experiment station of the Chinese Academy of
Sciences, wherein the No. 4 soil had been planted with rice, and the No. 5 soil had been planted with corn, while the No. 6 soil had been planted with soybean. The activity of glutamine synthetase was determined in the soil of three different tillage systems under the conditions of water content of 20% (air-dried soil weight) and temperature of 25°C for more than 24 hours. The detailed implementing process was the same as Embodiment 1.
The test results are as follows:
Glutamine synthetase activity
(mmol of hydroxyglutamyl Difference Standard Dispose of Repeat amide kg of dry soil h-i) . significance deviation Measured (P<0.05) Mean value value
Repeat 1 4.8842
1 Repeat 2 4.9987 4.9339 0.0587 B
Repeat 3 4.9189
Repeat 1 4.2879
2 Repeat 2 4.3147 4.2879 0.0267 c
Repeat 3 4.2613
Repeat 1 5.1546
3 Repeat 2 5.2209 5.1811 0.0351 a
Repeat 3 5.1678
The data in the table also shows the stability and high precision of the analysis results. It also showed that different farming systems had great effect on the activity of glutamine synthetase.

Claims (11)

THE CLAIMS DEFINING THE INVENTION ARE AS FOLLOWS:
1. An analytical method for detecting the activity of glutamine synthetase in soil is characterized in:
1) Weighing an air-dried soil sample with a sieve of 2-4 mm and fumigating the sample with chloroform;
2) Adding 1 gram of fumigated soil in n (n >=6) borosilicate test tubes, where 0.3 0.5 ml of reaction solution is added to each of the n/2, and 0.3-0.5 ml of control solution is added to each of the other n/2;
3) Adding 1.5-1.8 ml of glutamine solution (0.2 M) to all tubes.
4) Oscillating the test tube at room temperature for 50-70 minutes by using a reciprocating oscillator;
5) Adding 4.0-4.8 ml of termination solution after oscillating;
6) Standing for 3 minutes; taking 1.3 ml of supernatant for centrifugation after the solid particles are precipitated;
7) Taking 1 ml of supernatant obtained after centrifugation;
8) Colorimetric at 540 nm by using a spectrophotometer;
9) So as to obtain an absorbance value A;
10) Calculating the concentration S of 5-N-hydroxyglutamyl amide in the measured solution according to the absorbance value A and the slope b, S=A*b, wherein the concentration in the sample is defined as S1, and the concentration in the control is defined as S2;
11) The activity of glutamine synthetase in soil was calculated in units of mmol hydroxyglutamyl amide kg dry soil h 1 .
The calculation formula is [(S1-S2)*V/1000]*V/W.T=mmol hydroxyglutamyl amide kg dry soil h 1 .
Wherein, Sl is the concentration (mmol/L) of the hydroxyglutamyl amide in the sample; S2 is the concentration (mmol/L) of the hydroxyglutamyl amide in the control; V is the total volume (mL) of the leaching solution; W is the weight (g) of the soil sample; 1000 is the unit conversion coefficient; T is the culture time (h) of the soil sample.
2. The features of the analytical method according to claim 1 lie in the process to make a work standard curve: 1) preparing a standard solution: weigh 1.621 g of 5-N hydroxyglutamin amide and dissolve it in 1000 ml of pyrazole solution to get a standard stock solution with the concentration of 10 mmol/L; 2) suck 0, 1, 2, 3, 4 and 5 ml of the standard stock solution into a cuvette, and add 4.0 ml-4.8 ml of termination solution in, then fill all samples into 10 ml to obtain a series of concentration solutions with the concentration of 0, 1, 2, 3, 4 and 5 mmol/L, and colorimetric under the condition of 540 nm afterwards, then make the standard curve based on the absorbance and sample concentration to obtain the slope b.
3. The features of the analytical method according to claim 1 or 2 lie in the solutions, wherein the reaction solution is made of 10.5 ml of pyrazole buffer solution (pH 7.15), 0.9 ml of hydroxylamine hydrochloride (800 Mm), 0.1 ml of MnCL2 1. 4H20 (100 mM), 1.4 ml of KH2AsO 4 (280 mM) and 0.14 ml of adenosine diphosphate 5'monosodium glutamate (40 mM); the control solution is made of 11.95 ml of pyrazole buffer solution (pH 7.15), 0.9 ml of hydroxylamine hydrochloride, 0.1 ml of MnCL2-4H 20 and 0.14 ml of adenosine diphosphate 5'monosodium glutamate; the stop solution is made of 21 ml of hydrochloric acid, 20 g of trichloroformic acid, and 55 g of FeCl3. 6H 20 dissolved in 1 L of deionized water.
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