AU2017341084B2 - Classification and prognosis of cancer - Google Patents

Classification and prognosis of cancer Download PDF

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Publication number
AU2017341084B2
AU2017341084B2 AU2017341084A AU2017341084A AU2017341084B2 AU 2017341084 B2 AU2017341084 B2 AU 2017341084B2 AU 2017341084 A AU2017341084 A AU 2017341084A AU 2017341084 A AU2017341084 A AU 2017341084A AU 2017341084 B2 AU2017341084 B2 AU 2017341084B2
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desnt
genes
expression
patient
cancer
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AU2017341084A1 (en
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Daniel Simon BREWER
Colin Stephen Cooper
Bogdan-Alexandru LUCA
Vincent MOULTION
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UEA Enterprises Ltd
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UEA Enterprises Ltd
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30—Unsupervised data analysis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/112—Disease subtyping, staging or classification
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/118—Prognosis of disease development
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Data Mining & Analysis (AREA)
  • Microbiology (AREA)
  • Hospice & Palliative Care (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Oncology (AREA)
  • Evolutionary Computation (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Epidemiology (AREA)
  • Artificial Intelligence (AREA)
  • Databases & Information Systems (AREA)
  • Bioethics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Medical Treatment And Welfare Office Work (AREA)
AU2017341084A 2016-10-05 2017-10-05 Classification and prognosis of cancer Active AU2017341084B2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2024200150A AU2024200150A1 (en) 2016-10-05 2024-01-10 Classification and prognosis of cancer

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GB1616912.0 2016-10-05
GBGB1616912.0A GB201616912D0 (en) 2016-10-05 2016-10-05 Classification of cancer
PCT/EP2017/075368 WO2018065525A1 (en) 2016-10-05 2017-10-05 Classification and prognosis of cancer

Related Child Applications (1)

Application Number Title Priority Date Filing Date
AU2024200150A Division AU2024200150A1 (en) 2016-10-05 2024-01-10 Classification and prognosis of cancer

Publications (2)

Publication Number Publication Date
AU2017341084A1 AU2017341084A1 (en) 2019-04-11
AU2017341084B2 true AU2017341084B2 (en) 2023-11-02

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AU2017341084A Active AU2017341084B2 (en) 2016-10-05 2017-10-05 Classification and prognosis of cancer
AU2024200150A Pending AU2024200150A1 (en) 2016-10-05 2024-01-10 Classification and prognosis of cancer

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AU2024200150A Pending AU2024200150A1 (en) 2016-10-05 2024-01-10 Classification and prognosis of cancer

Country Status (7)

Country Link
US (2) US11746380B2 (enExample)
EP (1) EP3523443B1 (enExample)
JP (2) JP7365899B2 (enExample)
AU (2) AU2017341084B2 (enExample)
CA (1) CA3038743A1 (enExample)
GB (1) GB201616912D0 (enExample)
WO (1) WO2018065525A1 (enExample)

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AU2018266632B2 (en) * 2017-05-12 2024-07-25 The Henry M. Jackson Foundation For The Advancement Of Military Medicine. Inc. Prostate cancer gene profiles and methods of using the same
US11894139B1 (en) * 2018-12-03 2024-02-06 Patientslikeme Llc Disease spectrum classification
CN109637589B (zh) * 2018-12-13 2022-07-26 上海交通大学 基于频繁模式和机器学习双推荐制的核定位信号预测方法
GB2612911B (en) * 2019-02-14 2023-11-22 Mirvie Inc Methods and systems for determining a pregnancy-related state of a subject
CN111796095A (zh) * 2019-04-09 2020-10-20 苏州扇贝生物科技有限公司 一种蛋白质组质谱数据处理方法及装置
GB201915464D0 (en) * 2019-10-24 2019-12-11 Uea Enterprises Ltd Novel biomarkers and diagnostic profiles for prostate cancer
EP4204813A4 (en) * 2020-08-28 2024-11-27 The Johns Hopkins University Urinary glycoproteins for the early detection and treatment of aggressive prostate cancer
JP7774310B2 (ja) * 2020-09-30 2025-11-21 国立大学法人 長崎大学 腎がん患者の抗がん剤抵抗性および予後予測方法、抗腎がん物質のスクリーニング方法、ならびに、腎がん治療用医薬組成物
CN112365948B (zh) * 2020-10-27 2023-07-18 沈阳东软智能医疗科技研究院有限公司 癌症分期预测系统
CN116324874A (zh) * 2020-11-06 2023-06-23 威里利生命科学有限责任公司 对前列腺癌预后的人工智能预测
CN114540492A (zh) * 2022-01-10 2022-05-27 中山大学肿瘤防治中心（中山大学附属肿瘤医院、中山大学肿瘤研究所） 检测SCN4A和SCN7A mRNA表达量的产品在制备肝癌预后预测产品中的应用
US20250290150A1 (en) * 2022-05-04 2025-09-18 The Regents Of The University Of California Methods and systems for characterization, diagnosis, and treatment of cancer
KR102870357B1 (ko) * 2022-07-21 2025-10-13 인제대학교 산학협력단 인공지능 기술에 기반한 전립선암 조직의 세포 핵의 클러스터 분석 시스템 및 방법
CN117385041A (zh) * 2022-09-03 2024-01-12 昂凯生命科技(苏州)有限公司 用于预测肿瘤进展及预后的基因标志物组合、试剂盒及系统
CN120380170A (zh) * 2022-10-12 2025-07-25 液体活检研究有限责任公司 用于唾液中的前列腺癌检测的方法
CN116298292B (zh) * 2023-03-20 2023-09-08 江西省肿瘤医院(江西省第二人民医院、江西省癌症中心) Gng2蛋白的检测试剂在制备诊断和预后结肠癌的产品中的用途
WO2024206889A2 (en) * 2023-03-31 2024-10-03 The Board Of Regents Of The University Of Texas System Microbiome as a biomarker for prostate cancer

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Also Published As

Publication number Publication date
US11746380B2 (en) 2023-09-05
JP7365899B2 (ja) 2023-10-20
GB201616912D0 (en) 2016-11-16
JP2023003422A (ja) 2023-01-11
AU2024200150A1 (en) 2024-01-25
US20230349000A1 (en) 2023-11-02
EP3523443A1 (en) 2019-08-14
US20200263255A1 (en) 2020-08-20
EP3523443B1 (en) 2025-08-20
JP7539443B2 (ja) 2024-08-23
JP2019537108A (ja) 2019-12-19
AU2017341084A1 (en) 2019-04-11
WO2018065525A1 (en) 2018-04-12
CA3038743A1 (en) 2018-04-12

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