AU2012265564A1 - Anti-activin A antibodies and uses thereof - Google Patents

Anti-activin A antibodies and uses thereof Download PDF

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AU2012265564A1
AU2012265564A1 AU2012265564A AU2012265564A AU2012265564A1 AU 2012265564 A1 AU2012265564 A1 AU 2012265564A1 AU 2012265564 A AU2012265564 A AU 2012265564A AU 2012265564 A AU2012265564 A AU 2012265564A AU 2012265564 A1 AU2012265564 A1 AU 2012265564A1
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Australia
Prior art keywords
residue
activin
sequence
antibody
seq
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AU2012265564A
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AU2012265564B2 (en
AU2012265564A2 (en
Inventor
Qing Chen
Hq Han
Keith Soo-Nyung Kwak
Ziaolan Zhou
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Amgen Inc
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Amgen Inc
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Priority to AU2016219676A priority patent/AU2016219676A1/en
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Abstract

Abstract The disclosure provides compositions and methods relating to or derived from anti activin A binding proteins, including antibodies. In particular embodiments, the disclosure provides fully human, humanized, and chimeric anti-activin A antibodies that bind human activin A, activin A-binding fragments and derivatives of such antibodies, and activin A-binding polypeptides comprising such fragments. Other embodiments provide nucleic acids encoding such antibodies, antibody fragments and derivatives and polypeptides, cells comprising such polynucleotides, methods of making such antibodies, antibody fragments and derivatives and polypeptides, and methods of using such antibodies, antibody fragments and derivatives and polypeptides, including methods of treating or diagnosing subjects having activin A related disorders or conditions including cachexia related to gonadal cancer, other cancers, rheumatoid arthritis, and other diseases.

Description

ANTI-ACTIVIN A ANTIBODIES AND USES THEREOF TECHNICAL FIELD The present invention relates generally to cysteine knot domains of activin A and antigen binding agents capable of binding to activin A or fragments thereof. BACKGROUND OF THE INVENTION Many serious disease states are accompanied by a condition known as cachexia, which refers to loss of body cell mass. Body cell mass (BCM) consists of muscle mass, visceral mass and immune cell mass. BCM is the most active body component of the human body, counting ninety-five percent of all metabolic activity. A five percent loss of BCM leads to changed morbidity, loss of muscle strength, altered metabolism and increased risk of infection. A forty percent loss can result in death. Examples of conditions in which cachexia plays a role in determining the outcome of the underlying disease cover a range of the major health problems today. In rheumatoid cachexia, rheumatoid arthritis (RA) patients lose thirteen to fifteen percent of BCM. Two-thirds of RA patients have cachexia, and this results in a two- to five-fold higher mortality. Other related conditions include rheumatoid cachectic obesity and hypercytokinaemic cachexia. Cancer-related cachexia contributes significantly to the morbidity and mortality, also affecting a patient's ability to tolerate potentially life-saving therapies. Because of the common role of activin A in a number of widespread diseases, all of which have high rates of mortality, there is a long-felt need in the art for compositions and methods to prevent or reverse the disease-related cachexia. Such compositions and methods are provided herein. BRIEF SUMMARY OF THE INVENTION In one aspect, the present invention provides an isolated antigen binding protein comprising either: a. a light chain CDR3 comprising a sequence selected from the group consisting of: i. a light chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence selected from the group consisting of the light chain CDR3 sequences of Li -L14; ii. X 73 Q X 74
X
7 5
X
76
X
77
X
78
X
79
X
80 (SEQ ID NO: 132); iii. L Q H N X 81 Y X 82
X
83 T (SEQ ID NO: 131); 1 and iv. Q A W D X 84 S T X 85
X
86 (SEQ ID NO:248); b. a heavy chain CDR3 comprising a sequence selected from the group consisting of: i. a heavy chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence selected from the group consisting of the heavy chain CDR3 sequences of H1-H14; ii. X 87
X
88
X
8 9
X
9 0 X 9 1
X
92
X
93
X
94 F D Y (SEQ ID NO: 187); iii. X 9 5
X
96
X
97 Y
X
98 D X 99
X
100 G W Xioi X 10 2
X
103 (SEQ ID NO:188); iv. X 10 4 Xi 05
X
106
X
107 Xi 08
X
10 9 Y
XI
10 XII XI 1 2
XI
13
XI
1 4 Xs 15
X
116 Xy 17
XI
1 8 (SEQ ID NO:249); or c. the light chain CDR3 sequence of (a) and the heavy chain CDR3 sequence of (b); wherein X 73 is a methionine residue, a glutamine residue, or an arginine residue, X 74 is an alanine residue, a tyrosine residue, a glutamine residue, or a serine residue, X 75 is a leucine residue, a tyrosine residue, or an asparagine residue, X 76 is a glutamine residue, a serine residue, or a threonine residue,
X
77 is a threonine residue, a tyrosine residue, or an isoleucine residue, X 78 is a proline residue or a serine residue, X 79 is a cysteine residue, a tryptophan residue, a leucine residue, or a proline residue, X 8 0 is a serine residue or a threonine residue, X 81 is a threonine residue or a serine residue, X 82 is a proline residue or a threonine residue, X 8 3 is a phenylalanine residue or a tryptophan residue, X 84 is an arginine residue or a serine residue, X 85 is a valine residue or an alanine residue, X 86 is a valine residue or no residue, X 8 7 is a valine residue or no residue, X 8 8 is a glutamine residue or no residue, X 89 is an aspartate residue, a tryptophan residue, or no residue, X 90 is a serine residue, a leucine residue, or no residue, X 9 1 is an isoleucine residue, a glutamate residue, or a glutamine residue, X 92 is an alanine residue, a leucine residue, or a glycine residue, X 93 is an alanine residue or a leucine residue, X 94 is a proline residue, a tyrosine residue, or a glycine residue, X 95 is an aspartate residue or no residue, X 96 is a glutamine residue or no residue, X 97 is an aspartate residue or an alanine residue, X 98 is a tyrosine residue or a glycine residue, X 99 is a serine residue or a tyrosine 5 residue, X 1 00 is a serine residue or an arginine residue, X 1 o 1 is a phenylalanine residue or no residue, X 1 02 is a glycine residue or an aspartate residue, X 103 is a histidine residue or a proline residue, X 104 is a glycine residue or no residue, X 105 is a serine residue, a glutamate residue, or no residue, X 106 is an arginine residue, a serine residue, or no residue, X 10 7 is an aspartate residue, an asparagine residue, a serine residue, or a glutamine residue, X 10 8 is a serine residue, an arginine residue, or a tryptophan residue, X 1 09 is a glycine residue, an aspartate residue, an asparagine residue, a tyrosine residue, or a leucine residue, Xo 1 0 is a serine residue, a glycine residue, an aspartate residue, or no residue, X, 11 is a serine residue, a valine residue, an asparagine residue, or a tyrosine residue, X 112 is a serine residue, an asparagine residue, a tyrosine residue, or a histidine residue, XI 1 3 is a tryptophan residue, a 2 tyrosine residue, or a glutamine residue, X 1 1 4 is a histidine residue, an aspartate residue, a tyrosine residue, or no residue, X 1 15 is a phenylalanine residue, an alanine residue, or a glycine residue, X 16 an aspartate residue, a phenylalanine residue, a leucine residue, or a methionine residue, X 1 1 7 a tyrosine residue, or an aspartate residue, X, 18 is an isoleucine residue, a valine residue, or no residue, and the antigen binding protein binds specifically to human activin A. In one aspect, the present invention provides an isolated antigen binding protein, comprising: a. a light chain CDR1 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR1 sequence of SEQ ID NO: 11 (SGDKLGDKYAC); b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of SEQ ID NO:12 (QDSKRPS); c. a light chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of SEQ ID NO: 13 (QAWDSSTAV); d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of SEQ ID NO:62 (GYTFTSYGLS); e. a heavy chain CDR2 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR2 sequence of SEQ ID NO:63 (WIIPYNGNTNSAQKLQG); and f. a heavy chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of SEQ ID NO:64 (DRDYGVNYDAFDI). In another aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions 5 from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L 14; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of HI -H1I4; e. a heavy chain CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of HI-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR3 sequence of HI-H14. 3 In a further aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR1 sequence of LI-L14; b. a light chain CDR2 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR2 sequence of LI-L14; c. a light chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L14; d. a heavy chain CDR1 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR1 sequence of H1-H14; e. a heavy chain CDR2 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. In a further aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR3 sequence of LI-L14; d. a heavy chain CDR1 sequence of Hi-H14; e. a heavy chain CDR2 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR2 sequence of HI-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. In yet a further aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDRI sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDRI sequence of LI-L14; b. a light chain CDR3 sequence of LI-L14; c. a heavy chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and d. a heavy chain CDR3 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR3 sequence of HI-H14. In another aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions 4 from a CDR1 sequence of LI-L14; b. a heavy chain CDR2 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR2 sequence of H1-H14; and c. a heavy chain CDR3 sequence of H1-H14. In a still further aspect, the isolated antigen binding protein comprises an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR1 sequence of L1-L14; and b. a heavy chain CDR2 sequence of H1-H14. In a yet further aspect, the isolated antigen binding protein comprises a CDR1 sequence of L1-L14. The isolated antigen binding protein may comprise a sequence selected from the group consisting of: a. a light chain CDR1 sequence selected from the group consisting of: i. (R/K)SSQS(L/I)L(H/Y)S(T/S)(G/N)(Y/N)(N/K)(-/K)YL(D/V) (SEQ ID NO: 115); ii. RA(S/G)QGI(S/R)N(D/N)L-(V/G) (SEQ ID NO:250); iii. RASQSISNYLNT (SEQ ID NO:251); and iv. SG(D/E)K(L/W)G(D/E)K(F/Y)(A/V)(F/C) (SEQ ID NO:123); b. alight chain CDR2 sequence selected from the group consisting of: i. (H/Q/L)D(T/N/S)KRPS (SEQ ID NO:128); and ii. X 4 0
X
4 1 S X 42
X
43
X
44 S (SEQ ID NO:124), wherein X 40 is an alanine residue, a tryptophan residue, or a leucine residue, X 4 1 is a threonine residue, an alanine residue, or a glycine residue, X 42 is a serine residue, a methionine residue, or a phenylalanine residue, X 43 is a leucine residue or an arginine residue, X44 is a glutamine residue, a glutamate residue, or an alanine residue, c. a heavy chain CDRI sequence selected from the group consisting of: i. GGS(I/F)(N/S)(S/A)(-/G)(-/G)(F/Y)YWS (SEQ ID NO:252) ; ii. G X 2 7 X 2 8 F X 2 9
X
3 0 Y X 3 1
X
3 2
X
3 3 (SEQ ID NO:139), wherein X 2 7 is a tyrosine residue or a phenylalanine residue, X 2 8 is a threonine residue or a serine residue, X 29 is a threonine residue, a serine residue, or an isoleucine residue, X 30 is a glycine residue or a serine residue, 5 X 3 1 is a tyrosine residue, a glycine residue, or a tryptophan residue, X 32 is an isoleucine residue or a methionine residue, X 33 is a histidine residue or a glycine residue; and iii. G(Y/F)TF(T/S)-(S/A)Y(G/W)(L/M/1)(S/H) (SEQ ID NO: 140) ; d. a heavy chain CDR2 sequence selected from the group consisting of: i. (Y/E)I(S/Y/N)(Y/H)SG(S/G)T(Y/N)YNPSLK(S/R) (SEQ ID NO: 142); ii. (V/N)I(K/W)(Y/Q)DGS(N/E/T)(K/E)Y(H/Y)(A/V)DSVKG (SEQ ID NO: 179); and iii. X6o I X 61
X
62
X
63
X
64
X
65
X
66 T X 67
X
68
X
69
X
7 0 X 71
X
72 Q G (SEQ ID NO: 180), wherein X 60 is a tryptophan residue or an isoleucine residue, X 6 1 is an asparagine residue, an isoleucine residue, a serine residue, or a tyrosine residue, X 62 is a proline residue or an alanine residue,
X
6 3 is an asparagine residue, a tyrosine residue, or a glycine residue, X 64 is a serine residue, 5 an asparagine residue, or an aspartate residue, X 65 is a glycine residue or a serine residue, X 66 is a glycine residue, an asparagine residue, or an aspartate residue, X 67 is an asparagine residue or an arginine residue, X 68 is a tyrosine residue or a serine residue, X 6 9 is an alanine residue or a serine residue, X 70 is a glutamine residue or a proline residue, X 71 is a lysine residue or a serine residue, and X 72 is a phenylalanine residue or a leucine residue, wherein amino acid residue symbols enclosed in parentheses identify alternative residues for the same position in a sequence. In certain aspects, the isolated antigen binding protein comprises a heavy chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. In further aspects, the isolated antigen binding protein comprises a heavy chain CDR3 sequence that differs by no more than a total of one amino acid addition, substitution, or deletion from a CDR3 sequence of HI-H 14. In yet further aspects, the isolated antigen binding protein comprises a heavy chain CDR3 sequence of H1-H14. In another aspect, the isolated antigen binding protein comprises two amino acid sequences selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions from a CDR1 sequence of Ll-L14; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 5A WO 2008/031061 PCT/US2007/077923 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L14; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of H1-H14; e. a heavy chain 5 CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1I-H 14. In a further aspect, the isolated antigen binding protein comprises three amino 10 acid sequences selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of Li-LI 4; c. a light chain CDR3 sequence that differs by no more than a total of 15 three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L14; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of H1-H14; e. a heavy chain CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and f. a heavy chain 20 CDR3 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. In another aspect, the isolated antigen binding protein comprises four amino acid sequences selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions 25 from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of Ll-Ll 4; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid 30 additions, substitutions, and/or deletions from a CDR1 sequence of Hl-H14; e. a heavy chain CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. SEA2079156vl 0081428-000011 6 WO 2008/031061 PCT/US2007/077923 In another aspect, the isolated antigen binding protein comprises five amino acid sequences selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence that differs by no more 5 than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L14; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of HI-H 14; e. a heavy chain 10 CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14; and f. a heavy chain CDR3 sequence that differs by no more than a total of four amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14. In a still further aspect, the isolated antigen binding protein comprises :a. a 15 light chain CDR1 sequence that differs by no more than a total of six amino acid additions, substitutions, and/or deletions from a CDR1 sequence of L1-L14; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of L1-L14; c. a light chain CDR3 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions 20 from a CDR3 sequence of LI -L14; d. a heavy chain CDR] sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of H1-H14; e. a heavy chain CDR2 sequence that differs by no more than a total of five amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H 14; and f. a heavy chain CDR3 sequence that differs by no more than a total of four amino acid 25 additions, substitutions, and/or deletions from a CDR3 sequence of HI-H14. In another aspect, the isolated antigen binding protein comprises either: a. a light chain variable domain comprising: i. a light chain CDRI sequence; ii. a light chain CDR2 sequence; and iii. a light chain CDR3 sequence; b. a heavy chain variable domain comprising: i. a heavy chain CDR1 sequence; ii. a heavy chain CDR2 sequence; and iii. a 30 heavy chain CDR3 sequence; or c. the light chain variable domain of (a) and the heavy chain variable domain of (b). In one embodiment, the isolated antigen binding protein comprises a combination of a light chain variable domain and a heavy chain variable domain selected SEA 2079156v1 0081428-000011 7 WO 2008/031061 PCT/US2007/077923 from the group of combinations consisting of: LIH1, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, L10H10, L11H11, L12H12, L13H13, and L14H14. In one embodiment, the isolated antigen binding protein further comprises: the kappa light chain constant sequence of SEQ ID NO:84, 100 or 108, and/or the heavy chain 5 constant sequence of SEQ ID NO:214, 215 or 221. In one embodiment, the isolated antigen binding protein, when bound to activin A: a. inhibits activin A; b. cross-competes with a reference antibody for binding to activin A; c. binds to the same epitope of activin A as said reference antibody; d. binds to activin A with substantially the same Kd as said reference antibody; or e.. binds to activin A 10 with substantially the same off rate as said reference antibody; wherein the reference antibody comprises a combination of light chain and heavy chain variable domain sequences selected from the group of combinations consisting of L1H1, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, L10H10, L11H11, L12H12, L13H13, and L14H14. In one embodiment, the isolated antigen binding protein, when bound to a 15 human activin A, inhibits binding of activin A to human activin A receptor; attenuates cachexia in colon tumor-bearing mice; ameliorates the loss of body weight in colon tumor bearing mice; ameliorates the loss of body weight in a collagen-induced animal model of rheumatoid arthritis; ameliorates the loss of muscle mass in a collagen-induced animal model of rheumatoid arthritis; ameliorates the loss of fat mass in a collagen-induced animal model 20 of rheumatoid arthritis; and/or ameliorates the loss of body weight in a AAV-activin A transfected animal model. In one aspect, the isolated antigen binding protein comprises: a. a human antibody; b. a humanized antibody; c. a chimeric antibody; d. a monoclonal antibody; e. a polyclonal antibody; f. a recombinant antibody; g. an antigen-binding antibody fragment; h. 25 a single chain antibody; i. a diabody; j. a triabody; k. a tetrabody; 1. a Fab fragment; a F(ab') 2 fragment; n. a domain antibody; o. an IgD antibody; p. an IgE antibody; q. an IgM antibody; r. an IgGI antibody; s. an IgG2 antibody; t. an IgG3 antibody; u. an IgG4 antibody; or v. an IgG4 antibody having at least one mutation in a hinge region that alleviates a tendency to form intra-H chain disulfide bond. 30 Also provided is a human antigen binding protein specific for activin A, wherein the antigen binding protein possesses at least one in vivo biological activity of a human anti-activin A antibody; such as the attenuation of cachexia. SEA 2079156v1 0081428-000011 8 WO 2008/031061 PCT/US2007/077923 Further provided is a human antigen binding protein that ameliorates the loss of body weight in colon tumor-bearing mice, or that ameliorates the loss of body weight in a collagen-induced animal model of rheumatoid arthritis. Also provided is a human antigen binding protein that ameliorates the loss of 5 muscle mass in a collagen-induced animal model of rheumatoid arthritis, that ameliorates the loss of fat mass in a collagen-induced animal model of rheumatoid arthritis or that ameliorates the loss of body weight in a AAV-activin A transfected animal model. Further provided is a human antigen binding protein specific for activin A. wherein the antigen binding protein inhibits the binding of activin A to activin A receptor in 10 vitro. Also provided is a human antigen binding protein specific for activin A, wherein the antigen binding protein inhibits' the binding of activin A to activin A receptor in vivo. In another aspect, provided is an isolated polynucleotide comprising a 15 sequence that encodes the light chain, the heavy chain, or both of an antigen binding protein of the invention; the polynucleotide may comprise a light chain variable domain nucleic acid sequence of SEQ ID NO:1, 17, 33, 49, 65, 81, 97, 113, 129, 145, 161, 177, 193 or 209 and/or a heavy chain variable domain nucleic acid sequence of SEQ ID NO:2, 18, 34, 50, 66, 82, 98, 114, 130, 146, 162, 178, 194 or 210. 20 Also provided is a plasmid comprising the isolated polynucleotide; the plasmid may be an expression vector; and an isolated cell is provided that comprises the polynucleotide; the isolated cell may be a hybridoma, and the cell may be a CHO cell. Further provided is a method of making an antigen binding protein that binds human activin A, comprising incubating the isolated cell under conditions that allow it to 25 express said antigen binding protein. Also provided is a pharmaceutical composition comprising the antigen binding protein of the invention, a method of treating a condition in a subject comprising administering to the subject the pharmaceutical composition, wherein the condition is treatable by reducing the activity of activin A in said subject; the subject may be a human 30 being, and the condition may be cachexia associated with a tumor, wherein the tumor is a gonadal tumor, such as ovarian cancer, benign prostatic hyperplasia, prostate intraepithelial neoplasia, or prostate cancer, or wherein the tumor is bladder cancer, Wilm's tumor, pancreatic cancer, breast cancer, bone cancer, lung cancer, colorectal cancer, cervical cancer, synovial sarcoma, vasoactive intestinal peptide secreting tumors, glioblastoma, SEA 2079156v 0081428-000011 9 WO 2008/031061 PCT/US2007/077923 inedulloblastoma, head and neck squamous cell cancer, oral cancer, oral leukoplakia, , anal cancer, esophageal cancer, gastric cancer, bone cancer, or metastatic cancer; the condition may be cachexia associated with a rheumatoid arthritis; or the condition may be the need for decreasing activin A activity in a subject. 5 In another aspect, the present invention provides a method of maintaining muscle mass of a subject comprising administering to said subject said pharmaceutical composition. In another aspect, the present invention provides a method of decreasing activin A activity in a subject in need thereof comprising administering to said subject said 10 pharmaceutical composition. In another aspect, the present invention provides antibodies that are able to specifically bind amino acids K13-Y39 of activin A in vitro or in vivo. In another aspect, the present invention provides antibodies that are able to specifically bind amino acids V82 N107 in vitro or in vivo. 15 BRIEF DESCRIPTION OF THE DRAWINGS Figure 1 provides the muscle mass change for collagen induced arthritis mice treated with anti-activin A antibody Al. Figure 2 provides the fat mass change for collagen induced arthritis mice 20 treated with anti-activin A antibody Al. Figure 3 provides data showing that anti-activin A treatment using antibodies A1, A2 and A3 prevents body weight loss in young adult nude mice with an intramuscular CHO/Activin xenograft. Figure 4 provides NMR data showing that anti-activin A treatment prevents 25 loss of lean body mass in young adult nude mice with an intramuscular CHO/Activin xenograft. Figure 5 provides the effect of anti-activin A antibody Al on body weight changes in AAV-activin A transduced mice. Figure 6 provides the gastrocnemius muscle mass in a CDFl mouse Colon-26 30 cancer cachexis model with and without treatment with anti-activin A antibody Al, eighteen days after tumor inoculation. Figure 7 shows a model of activin A, with the region of antibody binding circled. K21, K103 and X94 refer to lysine residues at position 21 and 103, and a tyrosine SEA 2079156v1 0081428-000011 10 WO 2008/031061 PCT/US2007/077923 residue at position 94. Figure 8 is a graph showing the binding affinities of antibodies A1, A2 and A3 as determined using KinExA. The dissociation equilibrium constant was obtained from non linear regression of the competition curves using a dual-curve one-site homogeneous binding 5 model using the KinExA software. Figure 9 shows epitope regions that were not protected from degradation by binding of antibodies Al, A2 or A3. Figure 10 is a graph showing binding affinities of antibodies Al, A2, and A3 for intact activin A (indicated by lot 55), as well as activin A that is cleaved at the tyrosine 10 residue at amino acid position number 94 (indicated by lot 38). Figure 11 is a graph showing binding affinities of antibodies Al, A2, and A3, as well as two commercially available antibodies for activin A or activin B on immobilized antibody surfaces. Figure 12 shows antibody binding to activin A/activin B chimeras by antibody 15 Al and A2, as well as two commercially available activin A antibodies. Figure 13 shows the amino acid sequences of activin A/activin B chimeras utilized in the antibody testing described in Figure 11. Figure 14 shows binding of several antibodies, including A1, A2, and A3, to different epitopes of activin A; two commercially available activin A antibodies were also 20 tested. DETAILED DESCRIPTION The present invention relates to regions of the human activin A that contain cysteine knot domains recognized by antibodies that also bind to full-length activin A, and/or 25 a region of activin A that overlaps or encompasses a cysteine knot region of activin A, and methods of making and using these cysteine knot domains. The invention also provides antigen binding agents, including antibodies, that specifically bind to activin A or portions of activin A, and methods for using such binding agents. The binding agents are useful to block or impair binding of human activin A to one or more ligand. 30 Mortality from congestive heart failure (CHF) is related to cachexia. In one study (Anker, S. D. and Coats, A. J., Chest 115:836-847, 1999), sixteen percent of an unselected CHF outpatient population was cachectic. This state was predictive of impaired prognosis independent of age, functional disease classification, left ventricular ejection SEA 2079156vl 0081428-000011 11 WO 2008/031061 PCT/US2007/077923 fraction, and peak oxygen consumption. The mortality in the cachectic cohort was fifty percent at eighteen months. One pathway common to the disease progression in cancer, rheumatoid arthritis, chronic renal failure, congestive heart failure, and other conditions in which 5 cachexia is a factor is the activin A pathway. Muscle wasting and weakness are common in many disease states and conditions including aging, cancer cachexia, sepsis, denervation, disuse, inactivity, burns, HIV-acquired immunodeficiency syndrome (AIDS), chronic kidney or heart failure, unloading/microgravity, and muscular dystrophies. Activins and inhibins are members of the TGF-beta superfamily. Activins and inhibins function as stimulators and 10 inhibitors, respectively, of pituitary follicle-stimulating hormone (FSH) secretion and biosynthesis. Activin A is the predominant form of activin. In reproductive biology, activins and inhibins are important regulators of the ovarian cycle and the ovulation process, and may play a role in embryo implantation, and/or maintence of pregnancy. (O'Connor et al., Human Reproduction, V. 14, No. 3, 827-832, March 1999; Draper et al., Endocrin., V. 138, No. 7: 15 3042-3046; Jones, et al., Endocrin. V. 147, No. 2: 724-732, Feb. 2006). The identification of inhibins and activins in a wide variety of tissues suggests that these factors play much greater roles than the control of FSH secretion. Activins interact with two structurally related classes of serine/threonine kinase receptors (type I and type II). Inhibin antagonizes activin by binding to the 20 proteoglycan, betaglycan, and forming a stable complex with and thereby sequestering type II activin receptors while excluding type I receptors. Two major forms of activin exist: activin A is a homodimer of pA-subunits and activin B is a homodimer of pB-subunits. (Vale, et al., Recent Prog Horm Res V. 44: 1-34, 1988). Heterodimers of an a-subunit that is dissimilar to either p-subunit results in the functional antagonist inhibin. 25 The literature has shown that activin A is overexpressed and/or localized in cancer tissues. For example, high levels of serum activin A were found in women with endometrial and cervical carcinoma (Petraglia, F. et al., Jour. Clin. Endocrin. Metab. 83:1194-1200, 1998). Activin A was overexpressed in stage IV colorectal cancer (Wildi, S. et al., Gut 49:409-417, 2001). A role of activin A in ovarian cancer was reported (Steller, 30 M.D. et al., Mol. Cancer Res. 3:50-61, 2005). The literature has also implicated activin A in renal disease. (Yamashita, S. et al. . Am. Soc. Nephrol. 15:91-101, 2004.) Serum immunoreactive activin A levels in normal subjects and patients with disease were reported by Harada, K. et al. in J. Clin. Endocrin. and Metab. 81:2125-2130, 1996. Activin A is a potent activator of renal interstitial fibroblasts SEA 2079156v] 0081428-000011 12 WO 2008/031061 PCT/US2007/077923 (Harada, K. et al., J. Am. Soc. Nephrol. 15:91-101, 2004). Glomerular activin A overexpression is linked to fibrosis in anti-Thy 1 glomerulonephiitis (Gaedeke, J. et al., Neph. Dial. Transpl. 20:319-328, 2005). Serum activin A levels in heart failure patients increased according to disease 5 severity (Yndestal et al., Circulation 109:1379-1385, 2004). In a rat model of heart failure, serum activin A elevated immediately after myocardial infarct and persisted for six months, and activin A immunostaining was localized solely to cardiomyocytes (Yndestad et al., 2004). Elevated levels of activin A were reported in heart failure (Yndestad, A. et al., Circulation 109:1379-1385, 2004). 10 The present invention provides compositions, kits, and methods relating to molecules that bind to the activin A, including molecules that agonize or antagonize activin A, such as anti-activin A antibodies, antibody fragments, and antibody derivatives, e.g., antagonistic anti-activin A antibodies, antibody fragments, or antibody derivatives. Also provided are compositions, kits, and methods relating to molecules that specifically bind to a 15 portion of activin A, such as amino acids R13-Y39, or amino acids V82-NI07 of activin A. Such molecules may include antibodies, antibody fragments, and antibody derivatives. Also provided are nucleic acids, and derivatives and fragments thereof, comprising a sequence of nucleotides that encodes all or a portion of a polypeptide that binds to activin A, e.g., a nucleic acid encoding all or part of an anti-activin A antibody, antibody fragment, antibody 20 variant, or antibody derivative, plasmids and vectors comprising such nucleic acids, and cells or cell lines comprising such nucleic acids and/or vectors and plasmids. The provided methods include, for example, methods of making, identifying, or isolating molecules that bind to activin A, such as anti-activin A antibodies, methods of determining whether a molecule binds to activin A, methods of making compositions, such as pharmaceutical 25 compositions, comprising a molecule that binds to activin A, and methods for administering a molecule that binds activin A to a subject, for example, methods for treating a condition mediated by activin A, and for modulating a biological activity of activin A in vivo or in vitro. Polynucleotide and polypeptide sequences are indicated using standard one- or 30 three-letter abbreviations. Unless otherwise indicated, polypeptide sequences have their amino termini at the left and their carboxy termini at the right, and single-stranded nucleic acid sequences, and the top strand of double-stranded nucleic acid sequences, have their 5' termini at the left and their 3' termini at the right. A particular polypeptide or polynucleotide sequence also can be described by explaining how it differs from a reference sequence. SEA 2079156vl 0081428-000011 13 WO 2008/031061 PCT/US2007/077923 Unless otherwise indicated, it is understood that polynucleotide and polypeptide sequences include each nucleic acid or amino acid listed, respectively, as well as the intervening nucleic acids or amino acids. For example, the polypeptide sequence R13-Y39 sets forth a polypeptide sequence that includes the amino acids R13, and Y39, as well as the amino acids 5 found between R13 and Y39 in the polypeptide sequence. Correspondingly, the polynucleotide sequence C1-T5 sets forth a polynucleotide sequence that includes nucleic acids C1, and T5, as well as nucleic acids at positions 2, 3, and 4 of the sequence. Accordingly, designations of SEQ ID NO: 1-5 likewise designates the inclusive group of SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, and SEQ ID NO: 5. Finally, 10 amino acid groupings are also intended to be inclusive, unless otherwise designated. For example, the phrase "amino acids 1-5 of SEQ ID NO: 28" includes amino acids at positions 1, 2, 3, 4, and 5 of SEQ ID NO: 28. Polynucleotide and polypeptide sequences of particular light and heavy chain variable domains are shown below. Antibodies comprising a light chain and heavy chain are 15 designated by combining the name of the light chain and the name of the heavy chain variable domains. For example, "L4H7," indicates an antibody comprising the light chain variable domain of L4 and the heavy chain variable domain of H7. Kappa light chain constant sequences are shown in SEQ ID NO:84, 100 and 108, and heavy chain constant sequence are shown in SEQ ID NO:214, 215 and 221. 20 Polynucleotides encoding these sequences are shown in, for the light chains, respectively, SEQ ID NO:222, 223 and 239, and for the heavy chains, respectively, SEQ ID NO:240, 241, and 242. Thus, in addition to the variable sequences as disclosed herein, an antibody can comprise one or both of SEQ ID NO:84 and 214; or SEQ ID NO:215 and 223; or SEQ ID NO:108 and 221. 25 In other embodiments, an antibody may comprise a specific heavy or light chain, while the complementary light or heavy chain variable domain remains unspecified. In particular, certain embodiments herein include antibodies that bind a specific antigen (such as activin A) by way of a specific light or heavy chain, such that the complementary heavy or light chain may be promiscuous, or even irrelevant, but may be determined by, for example, 30 screening combinatorial libraries. Portolano et al., J. Immunol. V. 150 (3), pp. 880-887 (1993); Clackson et al., Nature v. 352 pp. 624-628 (1991). Unless otherwise defined herein, scientific and technical terms used in connection with the present invention shall have the meanings that are commonly understood by those of ordinary skill in the art. Further, unless otherwise required by context, singular SEA 2079156vl 0081428-000011 14 WO 2008/031061 PCT/US2007/077923 terms shall include pluralities and plural terns shall include the singular. Generally, nomenclatures used in connection with, and techniques of, cell and tissue culture, molecular biology, immunology, microbiology, genetics and protein and nucleic acid chemistry and hybridization described herein are those well known and commonly used in the art. The 5 methods and techniques of the present invention are generally performed according to conventional methods well known in the art and as described in various general and more specific references that are cited and discussed throughout the present specification unless otherwise indicated. See, e.g., Sambrook et al. Molecular Cloning: A Laboratory Manual, 2d ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. (1989) and Ausubel et 10 al., Current Protocols in Molecular Biology, Greene Publishing Associates (1992), and Harlow and Lane Antibodies: A Laboratory Manual Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. (1990), which are incorporated herein by reference. Enzymatic reactions and purification techniques are performed according to manufacturer's specifications, as commonly accomplished in the art or as described herein. The terminology 15 used in connection with, and the laboratory procedures and techniques of, analytical chemistry, synthetic organic chemistry, and medicinal and pharmaceutical chemistry described herein are those well known and commonly used in the art. Standard techniques can be used for chemical syntheses, chemical analyses, pharmaceutical preparation, formulation, and delivery, and treatment of patients. 20 The following terms, unless otherwise indicated, shall be understood to have the following meanings: The term "isolated molecule" (where the molecule is, for example, a polypeptide, a polynucleotide, or an antibody) is a molecule that by virtue of its origin or source of derivation (1) is not associated with naturally associated components that 25 accompany it in its native state, (2) is substantially free of other molecules from the same species (3) is expressed by a cell from a different species, or (4) does not occur in nature. Thus, a molecule that is chemically synthesized, or synthesized in a cellular system different from the cell from which it naturally originates, will be "isolated" from its naturally associated components. A molecule also may be rendered substantially free of naturally 30 associated components by isolation, using purification techniques well known in the art. Molecule purity or homogeneity may be assayed by a number of means well known in the art. For example, the purity of a polypeptide sample may be assayed using polyacrylamide gel electrophoresis and staining of the gel to visualize the polypeptide using techniques well SEA 2079156v1 0081428-000011 15 WO 2008/031061 PCT/US2007/077923 known in the art. For certain purposes, higher resolution may be provided by using HPLC or other means well known in the art for purification. The terms "activin A inhibitor" and "activin A antagonist" are used interchangeably. Each is a molecule that detectably inhibits at least one function of activin 5 A. Conversely, an "activin A agonist" is a molecule that detectably increases at least one function of activin A. The inhibition caused by an activin A inhibitor need not be complete so long as it is detectable using an assay. Any assay of a function of activin A can be used, examples of which are provided herein. Examples of functions of activin A that can be inhibited by an activin A inhibitor, or increased by an activin A agonist, include binding to 10 activin A. Examples of types of activin A inhibitors and activin A agonists include, but are not limited to, activin A binding polypeptides such as antigen binding proteins (e.g., activin A inhibiting antiben binding proteins), antibodies, antibody fragments, and antibody derivatives. The terms "peptide," "polypeptide" and "protein" each refers to a molecule 15 comprising two or more amino acid residues joined to each other by peptide bonds. These terms encompass, e.g., native and artificial proteins, protein fragments and polypeptide analogs (such as muteins, variants, and fusion proteins) of a protein sequence as well as post translationally, or otherwise covalently or non-covalently, modified proteins. A peptide, polypeptide, or protein may be monomeric or polymeric. 20 The tenm "polypeptide fragment" as used herein refers to a polypeptide that has an amino-terminal and/or carboxy-terminal deletion as compared to a corresponding full length protein. Fragments can be, for example, at least 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 20; 50, 70, 80, 90, 100, 150 or 200 amino acids in length. Fragments can also be, for example, at most 1,000, 750, 500, 250, 200, 175, 150, 125, 100, 90, 80, 70, 60, 50, 40, 30, 20, 15, 14, 13, 25 12, 11, or 10 amino acids in length. A fragment can further comprise, at either or both of its ends, one or more additional amino acids, for example, a sequence of amino acids from a different naturally-occurring protein (e.g., an Fc or leucine zipper domain) or an artificial amino acid sequence (e.g., an artificial linker sequence). Polypeptides of the invention include polypeptides that have been modified in 30 any way and for any reason, for example, to: (1) reduce susceptibility to proteolysis, (2) reduce susceptibility to oxidation, (3) alter binding affinity for forming protein complexes, (4) alter binding affinities, and (4) confer or modify other physicochemical or functional properties. Analogs include muteins of a polypeptide. For example, single or multiple amino acid substitutions (e.g., conservative amino acid substitutions) may be made in the naturally SEA2079156vl 0081428-000011 16 WO 2008/031061 PCT/US2007/077923 occurring sequence (e.g., in the portion of the polypeptide outside the domain(s) forming intermolecular contacts). A "conservative amino acid substitution" is one that does not substantially change the structural characteristics of the parent sequence (e.g., a replacement amino acid should not tend to break a helix that occurs in the parent sequence, or disrupt 5 other types of secondary structure that characterize the parent sequence or are necessary for its functionality). Examples of art-recognized polypeptide secondary and tertiary structures are described in Proteins, Structures and Molecular Principles (Creighton, Ed., W. H. Freeman and Company, New York (1984)); Introduction to Protein Structure (C. Branden and J. Tooze, eds., Garland Publishing, New York, N.Y. (1991)); and Thornton et al. Nature 10 354:105 (1991), which are each incorporated herein by reference. A "variant" of a polypeptide (e.g., an antibody) comprises an amino acid sequence wherein one or more amino acid residues are inserted into, deleted from and/or substituted into the amino acid sequence relative to the native polypeptide sequence, and retains essentially the same biological activity as the native polypeptide. The biological 15 activity of the polypeptide can be measured using standard techniques in the art (for example, if the variant is an antibody, its activity may be tested by binding assays, as described herein). Variants of the invention include fragments, analogs, recombinant polypeptides, synthetic polypeptides, and/or fusion proteins.A "derivative" of a polypeptide is a polypeptide (e.g., an antibody) that has been chemically modified, e.g., via conjugation to another chemical moiety 20 such as, for example, polyethylene glycol, albumin (e.g., human serum albumin), phosphorylation, and glycosylation. Unless otherwise indicated, the term "antibody" includes, in addition to antibodies comprising two full-length heavy chains and two full length light chains, derivatives, variants, fragments, and muteins thereof, examples of which are described below. 25 An "antigen binding protein" is a protein comprising a portion that binds to an antigen and, optionally, a scaffold or framework portion that allows the antigen binding portion to adopt a conformation that promotes binding of the antigen binding protein to the antigen. Examples of antigen binding proteins include antibodies, antibody fragments (e.g., an antigen binding portion of an antibody), antibody derivatives, and antibody analogs. The 30 antigen binding protein can comprise, for example, an alternative protein scaffold or artificial scaffold with grafted CDRs or CDR derivatives. Such scaffolds include, but are not limited to, antibody-derived scaffolds comprising mutations introduced to, for example, stabilize the three-dimensional structure of the antigen binding protein as well as wholly synthetic scaffolds comprising, for example, a biocompatible polymer. See, for example, Korndorfer SEA 2079156v 10081428-000011 17 WO 2008/031061 PCT/US2007/077923 et al., 2003, Proteins: Structure, Function, and Bioinformatics, Volume 53, Issue 1:121-129; Roque et al., 2004, Biotechnol. Prog. 20:639-654. In addition, peptide antibody mimetics ("PAMs") can be used, as well as scaffolds based on antibody mimetics utilizing fibronection components as a scaffold. 5 An antigen binding protein can have, for example, the structure of a naturally occurring immunoglobulin. An "inununoglobulin" is a tetramneric molecule. In a naturally occurring immunoglobulin, each tetramer is composed of two identical pairs of polypeptide chains, each pair having one "light" (about 25 kDa) and one "heavy" chain (about 50-70 kDa). The amino-terminal portion of each chain includes a variable region of about 100 to 10 110 or more amino acids primarily responsible for antigen recognition. The carboxy-terminal portion of each chain defines a constant region primarily responsible for effector function. Human light chains are classified as kappa and lambda light chains. Heavy chains are classified as mu, delta, gamma, alpha, or epsilon, and define the antibody's isotype as IgM, IgD, IgG, IgA, and IgE, respectively. Within light and heavy chains, the variable and 15 constant regions are joined by a "J" region of about 12 or more amino acids, with the heavy chain also including a "D" region of about 10 more amino acids. See generally, Fundamental Immunology Ch. 7 (Paul, W., ed., 2nd ed. Raven Press, N.Y. (1989)) (incorporated by reference in its entirety for all purposes). The variable regions of each light/heavy chain pair form the antibody binding site such that an intact immunoglobulin has two binding sites. 20 Naturally occurring immunoglobulin chains exhibit the same general structure of relatively conserved framework regions (FR) joined by three hypervariable regions, also called complementarity determining regions or CDRs. From N-tenninus to C-terminus, both light and heavy chains comprise the domains FRI, CDR1, FR2, CDR2, FR3, CDR3 and FR4. The assignment of amino acids to each domain is in accordance with the definitions of Kabat 25 et al. in Sequences of Proteins of Immunological Interest, 5h Ed., US Dept. of Health and Human Services, PHS, NIH, NIH Publication no. 91-3242, 1991. An "antibody" refers to an intact immunoglobulin or to an antigen binding portion thereof that competes with the intact antibody for specific binding, unless otherwise specified. Antigen binding portions may be produced by recombinant DNA techniques or by 30 enzymatic or chemical cleavage of intact antibodies. Antigen binding portions include, inter alia, Fab, Fab', F(ab') 2 , Fv, domain antibodies (dAbs), and complementarity determining region (CDR) fragments, single-chain antibodies (scFv), chimeric antibodies, diabodies, triabodies, tetrabodies, and polypeptides that contain at least a portion of an immunoglobulin that is sufficient to confer specific antigen binding to the polypeptide. SEA 2079156v l0081428-000011 18 WO 2008/031061 PCT/US2007/077923 A Fab fragment is a monovalent fragment having the VL, VH, CL and CH 1 domains; a F(ab') 2 fragment is a bivalent fragment having two Fab fragments linked by a disulfide bridge at the hinge region; a Pd fragment has the VH and CH1 domains; an Fv fragment has the VL and VH domains of a single arm of an antibody; and a dAb fragment has 5 a VH domain, a VL domain, or an antigen-binding fragment of a VH or VL domain (US Pat. No. 6,846,634, 6,696,245, US App. Pub. No. 05/0202512, 04/0202995, 04/0038291, 04/0009507, 03/0039958, Ward et al., Nature 341:544-546, 1989). A single-chain antibody (scFv) is an antibody in which a VL and a V 1 region are joined via a linker (e.g., a synthetic sequence of amino acid residues) to form a 10 continuous protein chain wherein the linker is long enough to allow the protein chain to fold back on itself and form a monovalent antigen binding site (see, e.g., Bird et al., 1988, Science 242:423-26 and Huston et al., 1988, Proc. Nati. Acad. Sci. USA 85:5879-83). Diabodies are bivalent antibodies comprising two polypeptide chains, wherein each polypeptide chain comprises VH and VL domains joined by a linker that is too short to allow for pairing between 15 two domains on the same chain, thus allowing each domain to pair with a complementaiy domain on another polypeptide chain (see, e.g., Holliger et al., 1993, Proc. Nall. A cad. Sci. USA 90:6444-48, and Poljak et al., 1994, Structure 2:1121-23). If the two polypeptide chains of a diabody are identical, then a diabody resulting from their pairing will have two identical antigen binding sites. Polypeptide chains having different sequences can be used to 20 make a diabody with two different antigen binding sites. Similarly, tribodies and tetrabodies are antibodies comprising three and four polypeptide chains, respectively, and forming three and four antigen binding sites, respectively, which can be the same or different. Complementarity determining regions (CDRs) and framework regions (FR) of a given antibody-may be identified using the system described by Kabat et al. in Sequences 25 of Proteins of Immunological Interest, 5th Ed., US Dept. of Health and Human Services, PHS, NIH, NIH Publication no. 91-3242, 1991. One or more CDRs may be incorporated into a molecule either covalently or noncovalently to make it an antigen binding protein. An antigen binding protein may incorporate the CDR(s) as part of a larger polypeptide chain, may covalently link the CDR(s) to another polypeptide chain, or may incorporate the CDR(s) 30 noncovalently. The CDRs permit the antigen binding protein to specifically bind to a particular antigen of interest. An antigen binding protein may have one or more binding sites. If there is more than one binding site, the binding sites may be identical to one another or may be different. For example, a naturally occurring human immunoglobulin typically has two SEA 2079156v1 0081428-000011 19 WO 2008/031061 PCT/US2007/077923 identical binding sites, while a "bispecific" or "bifunctional" antibody has two different binding sites. The term "human antibody," also referred to as "fully human antibody," includes all antibodies that have one or more variable and constant regions derived from 5 human immunoglobulin sequences. In one embodiment, all of the variable and constant domains are derived from human immunoglobulin sequences (a fully human antibody). These antibodies may be prepared in a variety of ways, examples of which are described below, including through the immunization with an antigen of interest of a mouse that is genetically modified to express antibodies derived from human heavy and/or light chain 10 encoding genes. A humanized antibody has a sequence that differs from the sequence of an antibody derived from a non-human species by one or more amino acid substitutions, deletions, and/or additions, such that the humanized antibody is less likely to induce an immune response, and/or induces a less severe immune response, as compared to the non 15 human species antibody, when it is administered to a human subject. In one embodiment, certain amino acids in the framework and constant domains of the heavy and/or light chains of the non-human species antibody are mutated to produce the humanized antibody. In another embodiment, the constant domain(s) from a human antibody are fused to the variable domain(s) of a non-human species. In another embodiment, one or more amino acid residues 20 in one or more CDR sequences of a non-human antibody are changed to reduce the likely immunogenicity of the non-human antibody when it is administered to a human subject, wherein the changed amino acid residues either are not critical for immunospecific binding of the antibody to its antigen, or the changes to the amino acid sequence that are made are conservative changes, such that the binding of the humanized antibody to the antigen is not 25 significantly worse than the binding of the non-human antibody to the antigen. Examples of how to make humanized antibodies may be found in U.S. Pat. Nos. 6,054,297, 5,886,152 and 5,877,293. The term "chimeric antibody" refers to an antibody that contains one or more regions from one antibody and one or more regions from one or more other antibodies. In 30 one embodiment, one or more of the CDRs are derived from a human anti-activin A antibody. In another embodiment, all of the CDRs are derived from a human anti-activin A antibody. In another embodiment, the CDRs from more than one human anti-activin A antibodies are mixed and matched in a chimeric antibody. For instance, a chimeric antibody may comprise a CDR1 from the light chain of a first human anti-activin A antibody, a CDR2 SEA 2079156vl 0081428-000011 20 WO 2008/031061 PCT/US2007/077923 and a CDR3 from the light chain of a second human anti-activin A antibody, and the CDRs from the heavy chain from a third anti-activin A antibody. Further, the framework regions may be derived from one of the same anti-activin A antibodies, from one or more different antibodies, such as a human antibody, or from a humanized antibody. In one example of a 5 chimeric antibody, a portion of the heavy and/or light chain is identical with, homologous to, or derived from an antibody from a particular species or belonging to a particular antibody class or subclass, while the remainder of the chain(s) is/are identical with, homologous to, or derived from an antibody (-ies) from another species or belonging to another antibody class or subclass. Also included are fragments of such antibodies that exhibit the desired 10 biological activity (i.e., the ability to specifically bind activin A). Fragments or analogs of antibodies can be readily prepared by those of ordinary skill in the art following the teachings of this specification and using techniques well-known in the art. Preferred amino- and carboxy-termini of fragments or analogs occur near boundaries of functional domains. Structural and functional domains can be identified 15 by comparison of the nucleotide and/or amino acid sequence data to public or proprietary sequence databases. Computerized comparison methods can be used to identify sequence motifs or predicted protein conformation domains that occur in other proteins of known structure and/or function. Methods to identify protein sequences that fold into a known three dimensional structure are known. See, e.g., Bowie et al., 1991, Science 253:164. 20 Additionally, antigen specific (i.e. activin A specific) antibodies can be produced by methods known in the art by using a specific VL or VH domain to screen a library of the complementary variable domain. Such methods of producing antibodies are known in the art. For example, antibody fragments fused to another protein, such as a minor coat protein, can be used to enrich phage with antigen. Then, using a random combinatorial 25 library of rearragned heavy (VH) and light (VL) chains from mice immune to the antigen (e.g. activin A), diverse libraries of antibody fragments are displayed on the surface of the phage. These libraries can be screened for complementary variable domains, and the domains purified by, for example, affinity column. See Clackson et al., Nature, V. 352 pp. 624-628 (1991). 30 In another example, individual VL or VH chains from an antibody (i.e. activin A antibody) can be used to search for other VH or VL chains that could form antigen-binding fragments (or Fab), with the same specificity. Thus, random combinations of VH and VL chain Ig genes can be expresses as antigen-binding fragments in a bacteriophage library (such as fd or lambda phage). For instance, a combinatorial library may be generated by utilizing SEA 2079156vl 0081428-000011 21 WO 2008/031061 PCT/US2007/077923 the parent VL or VH chain library combined with antigen-binding specific VL or VH chain libraries, respectively. The combinatorial libraries may then be screened by conventional techniques, for example by using radioactively labeled probe (such as radioactively labeled activin A). See, for example, Portolano et al., J. Immunol. V. 150 (3) pp. 880-887 (1993). 5 A "CDR grafted antibody" is an antibody comprising one or more CDRs derived from an antibody of a particular species or isotype and the framework of another antibody of the same or different species or isotype. A "multi-specific antibody" is an antibody that recognizes more than one epitope on one or more antigens. A subclass of this type of antibody is a "bi-specific 10 antibody" which recognizes two distinct epitopes on the same or different antigens. An "antigen binding domain," "antigen binding region," or "antigen binding site" is a portion of an antigen binding protein that contains amino acid residues (or other moieties) that interact with an antigen and contribute to the antigen binding protein's specificity and affinity for the antigen. For an antibody that specifically binds to its antigen, 15 this will include at least part of at least one of its CDR domains. An "epitope" is the portion of a molecule that is bound by an antigen binding protein (e.g., by an antibody). An epitope can comprise non-contiguous portions of the molecule (e.g., in a polypeptide, amino acid residues that are not contiguous in the polypeptide's primary sequence but that, in the context of the polypeptide's tertiary and 20 quaternary structure, are near enough to each other to be bound by an antigen binding protein), and includes the end sequence amino acids listed. For example the polypeptide sequence R13-Y39 includes amino acids R13, and Y39, as well as the amino acids found between R13 and Y39 in the sequence. In embodiments in which the epitope comprises non contiguous portions of a molecule, the sequences will be noted accordingly 25 The "percent identity" of two polynucleotide or two polypeptide sequences is determined by comparing the sequences using the GAP computer program (a part of the GCG Wisconsin Package, version 10.3 (Accelrys, San Diego, CA)) using its default parameters. The terms "polynucleotide," "oligonucleotide" and "nucleic acid" are used interchangeably throughout and include DNA molecules (e.g., cDNA or genoinic DNA), 30 RNA molecules (e.g., mRNA), analogs of the DNA or RNA generated using nucleotide analogs (e.g., peptide nucleic acids and non-naturally occurring nucleotide analogs), and hybrids thereof. The nucleic acid molecule can be single-stranded or double-stranded. In one embodiment, the nucleic acid molecules of the invention comprise a contiguous open reading SEA 2079156v1 0081428 -000011 22 WO 2008/031061 PCT/US2007/077923 frame encoding an antibody, or a fragment, derivative, mutein, or variant thereof, of the invention. Two single-stranded polynucleotides are "the complement" of each other if their sequences can be aligned in an anti-parallel orientation such that every nucleotide in one 5 polynucleotide is opposite its complementary nucleotide in the other polynucleotide, without the introduction of gaps, and without unpaired nucleotides at the 5' or the 3' end of either sequence. A polynucleotide is "complementary" to another polynucleotide if the two polynucleotides can hybridize to one another under moderately stringent conditions. Thus, a polynucleotide can be complementary to another polynucleotide without being its 10 complement. A "vector" is a nucleic acid that can be used to introduce another nucleic acid linked to it into a cell. One type of vector is a "plasmid," which refers to a linear or circular double stranded DNA molecule into which additional nucleic acid segments can be ligated. Another type of vector is a viral vector (e.g., replication defective retroviruses, adenoviruses 15 and adeno-associated viruses), wherein additional DNA segments can be introduced into the viral genome. Certain vectors are capable of autonomous replication in a host cell into which they are introduced (e.g., bacterial vectors comprising a bacterial origin of replication and episomal mammalian vectors). Other vectors (e.g., non-episomal mammalian vectors) are integrated into the genome of a host cell upon introduction into the host cell, and thereby are 20 replicated along with the host genome. An "expression vector" is a type of vector that can direct the expression of a chosen polynucleotide. A nucleotide sequence is "operably linked" to a regulatory sequence if the regulatory sequence affects the expression (e.g., the level, timing, or location of expression) of the nucleotide sequence. A "regulatory sequence" is a nucleic acid that affects the 25 expression (e.g., the level, timing, or location of expression) of a nucleic acid to which it is operably linked. The regulatory sequence can, for example, exert its effects directly on the regulated nucleic acid, or through the action of one or more other molecules (e.g., polypeptides that bind to the regulatory sequence and/or the nucleic acid). Examples of regulatory sequences include promoters, enhancers and other expression control elements 30 (e.g., polyadenylation signals). Further examples of regulatory sequences are described in, for example, Goeddel, 1990, Gene Expression Technology: Methods in Enzymology 185, Academic Press, San Diego, CA and Baron et al., 1995, Nucleic Acids Res. 23:3605-06, A "host cell" is a cell that can be used to express a nucleic acid, e.g., a nucleic acid of the invention. A host cell can be a prokaryote, for example, E. coli, or it can be a SEA 2079156v1 0081428-000011 23 WO 2008/031061 PCT/US2007/077923 eukaryote, for example, a single-celled eukaryote (e.g., a yeast or other fungus), a plant cell (e.g., a tobacco or tomato plant cell), an animal cell (e.g., a human cell, a monkey cell, a hamster cell, a rat cell, a mouse cell, or an insect cell) or a hybridoma. Example 3 herein described the use of CS-9 cells. Examples of other host cells include the COS-7 line of 5 monkey kidney cells (ATCC CRL 1651) (see Gluzman et al., 1981, Cell 23:175), L cells, C127 cells, 3T3 cells (ATCC CCL 163), Chinese hamster ovary (CHO) cells or their derivatives such as Veggie CHO and related cell lines which grow in serum-free media (see Rasmussen et al., 1998, Cytotechnology 28:31), HeLa cells, BHK (ATCC CRL 10) cell lines, the CV 1/EBNA cell line derived from the African green monkey kidney cell line CV1 10 (ATCC CCL 70) (see McMahan et al., 1991, EMBO J. 10:2821), human embryonic kidney cells such as 293, 293 EBNA or MSR 293, human epidermal A431 cells, human Colo205 cells, other transformed primate cell lines, normal diploid cells, cell strains derived from in vitro culture of primary tissue, primary explants, HL-60, U937, HaK or Jurkat cells. Typically, a host cell is a cultured cell that can be transformed or transfected with a 15 polypeptide-encoding nucleic acid, which can then be expressed in the host cell. The phrase "recombinant host cell" can be used to denote a host cell that has been transformed or transfected with a nucleic acid to be expressed. A host cell also can be a cell that comprises the nucleic acid but does not express it at a desired level unless a regulatory sequence is introduced into the host cell such that it becomes operably linked with the nucleic acid. It is 20 understood that the term host cell refers not only to the particular subject cell but to the progeny or potential progeny of such a cell. Because certain modifications may occur in succeeding generations due to, e.g., mutation or environmental influence, such progeny may not, in fact, be identical to the parent cell, but are still included within the scope of the term as used herein. 25 Antigen binding proteins In one aspect, the present invention provides antigen binding proteins (e.g., antibodies, antibody fragments, antibody derivatives, antibody muteins, and antibody variants), that bind to activin A, e.g., human activin A. 30 Antigen binding proteins in accordance with the present invention include antigen binding proteins that inhibit a biological activity of activin A. For example, antigen binding proteins may attenuate cachexia, and this activity can be present when the antigen binding protein is fully human, such as a fully human antibody. SEA 2079156vl 0081428-000011 24 WO 2008/031061 PCT/US2007/077923 Different antigen binding proteins may bind to different domains or cysteine knot domains of activin A or act by different mechanisms of action. Examples include but are not limited to antigen binding proteins that specifically bind one or more particular cysteine knot domains, or regions interspersed between disulfide bonds, including regions 5 spanning from about amino acids 4-12, amino acids 11-81, amino acids 11-33, amino acids 13-39, amino acids 40-113, amino acids 44-115, amino acids 81-111, and/or amino acids 82 107 of SEQ ID NO: 1. As indicated herein inter alia, the domain region are designated such as to be inclusive of the group, unless otherwise indicated. For example, amino acids 4-12 refers to nine amino acids: amino acids at positions 4, and 12, as well as the seven 10 intervening amino acids in the sequence. Other examples include antigen binding proteins that inhibit binding of activin A to its receptor. An antigen binding protein need not completely inhibit an activin A-induced activity to find use in the present invention; rather, antigen binding proteins that reduce a particular activity of activin A are contemplated for use as well. (Discussions herein of particular mechanisms of action for activin A-binding antigen 15 binding proteins in treating particular diseases are illustrative only, and the methods presented herein are not bound thereby.) In another aspect, the present invention provides antigen binding proteins that comprise a light chain variable region selected from the group consisting of Al-A 14 or a heavy chain variable region selected from the group consisting of Al-A14, and fragments, 20 derivatives, muteins, and variants thereof. Such an antigen binding protein can be denoted using the nomenclature "LxHy", wherein "x" corresponds to the number of the light chain variable region and "y" corresponds to the number of the heavy chain variable region as they are labeled in the sequences below. That is to say, for example, that "AlHC" denotes the heavy chain variable region of antibody Al; "A1LC" denotes the light chain variable region 25 of antibody Al, and so forth. More generally speaking, "L2H1" refers to an antigen binding protein with a light chain variable region comprising the amino acid sequence of L2 and a heavy chain variable region comprising the amino acid sequence of H1. For clarity, all ranges denoted by at least two members of a group include all members of the group between and including the end range members. Thus, the group range A 1-A14, includes all members 30 between Al and A14, as well as members Al and A14 themselves. The group range A4-A6 includes members A4, A5, and A6, etc. Also shown below are the locations of the CDRs, or Complementarity Determining Regions (shaded and underlined) that create part of the antigen-binding site, while the Framework Regions (FRs)are the intervening segments of these variable domain SEA 2079156v1 0081428-000011 25 WO 2008/031061 PCT/US2007/077923 sequences. In both light chain variable regions and heavy chain variable regions there are three CDRs (CDR 1-3) and four FRs (FR 1-4). The CDR regions of each light and heavy chain also are grouped by antibody type (Al, A2, A3, etc.). Antigen binding proteins of the invention include, for example, antigen binding proteins having a combination of light chain 5 and heavy chain variable domains selected from the group of combinations consisting of LIH1 (antibody Al), L2H2 (antibody A2), L3H3 (antibody A3), L4H4 (antibody A4), L5H5 (antibody A5), L6H6 (antibody A6), L7H7 (antibody A7), L8H8 (antibody A8), L9H9 (antibody A9), L10HIO (antibody A10), LI H1l1 (antibody A 11), 12H12 (antibody A12), L13H13 (antibody A13), and L14H14 (antibody A14). 10 Antibodies A1-A14 heavy and light chain variable region polynucleotides (also referred to herein as H1-H14 and L1-L14). A1 HC 15 CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTG AAGGTCTCCTGCAAGGCTTCTGG'TACACCBTTACCAGTTA TGGTCTCAGCTGG G TGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCATCCCTfACA ATGGTAACACA AACTCTGCACAGAAACTCCAGGGCAGAGTCACCATGACCACAG ACACATCCACGAGCACAGCCTACATGGAGC'GAGGAGCCTGAGATCTGACGACA 20 CGGCCGTGTATTTCTGTGCGAGAGACAGGACTACGTGTTCAATTATGATGCTT TGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA (SEQ ID NO:2) Al LC 25 TCCTATGAGGTGACTCAGGCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCA GCATCACCTGCTCTGGAGATAAATTGGGGGATAAATATGCTTGTTGGTATCAGCA GAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATCAAGATAGCA AGCGGCCCTCA GGGATCCCTGAGCGATTCTCTGGCTCCAACTCTGGAAACACAGCCACTCTGACCA TCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGTCAGGCGTGGGACA 30 GCNGCACTGCGETA.TTCGGCGGAGGGACCAAGCTGACCGTCCTA (SEQ ID NO:1) A2HC 35 CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTG AGACTCTCCTGTGCAGCGTCTGGATdCACCTTCAGT.A)TTACGGCATGCACTGGG TCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCA GTTA T ATOTATA GAAGTAATAAATACCATGCAGA CTCCGTGAAGGGCCGATTCACCATCTCCAGAG ACAATTCCAAGAACACGCTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACA 40 CGGCTGTGTATTACTGTGTGAGAAGTCGGAATOGAACTACGACAACTACTACTA CGGTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCAG (SEQ ID NO:18) SEA 2079156v1 0081428-000011 26 WO 2008/031061 PCUIUS2007/077923 A2 LC GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAG T CA C CATC A C'TGCOCG6"1G C AAGdt CAG G CAX TTA 6AA'-A A Al.I'TAGOCTGGTATCA 5 GCAGAAACCAGGGAAAGCCCCTAAGjCGCCT3A]TrTATGC(-TGCAT-cCAOTITA3CA AATGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAA'T'CACTCT CACAATCAGCAGTCTGCAGCCTGAAGATTJTACAACTTATTACTGTC-TACAOCAT A ATAGT.T ACCCG TGGAC GYFCGGCCAAGGGACCAAGGTGGAAATCAAA (SEQ ID NO:17) 10 A3 HC GAGGTGCAG'JTGGTGGAGTCTGGGGGAGGC'JTGGTCCAGCCTGGGGGGTCCCTG 15 AGACTCTCCTGTGCAGCCTCTCdGATTC(ACC- TTTAGiTAG TTATTFG*GATGAGC I.TGGG TCCGCCAGGCTCCAGGGAAGGGGC'TGGAGTIGCGTGGCCAAC ATAAAGC...AAQATG .GAAG.TiG AAT Ac.- TAt-, ::AWCTGTAAiGOOCCGKTFFCACCATCTCCAGAG ACAACGCCAAGAATTCACTGTATCTGC'AAATIGAACAGCCTGAGAGCCGAGGACA CGGCTGTGTATfFACTGTGCGAGAGTAGC'A 'I GG~ATCAAftACGG 20 TATGGAGOTO'TGGGGCCAAGGGACCACGGTCACCGTCTCcCCA (SEQ ID NO:34) A3 LC 25 GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAG TCACCATCACJTGCCGGGCA-AGTC-'ACG(CAXITAGAAATYGATTTAGGCTGGTATCA GCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATCCTGCATCCAG3TI'TG'CA CACAATCAGCAGCCTGCAGCCTGAAGATTfJTGCAACTTAYJ'ACTGTCGjA GCAA 30 ATcTcCTCcFFCGGCGGAGGGACCAAGGTGGAGATCAAA (SEQ ID NO:33) A4 HC 35 CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTG AAGGTCTCCTGCAAGGCTTCTGAAACTCCC'TCTTTCATG TGCGACAGGCCCCTGGACAAGGGCIFJGAGTG'CGATGGGA'tG(GATICAACCCT'IAACA G T 'cTGQCACAAWACAGCACAGAAG~TTTCAGGGCAGGGTIC'AC'C'ATGA(CAGGG ACACGTCCATCAGCACAG'CCTACATGG-j~AG-jCTG'AGCAGG~iCTGAG-ATCTG"'(ACG'(ACA 40 CGGCCGTGTATfFTCTGTGCCAGACIA117CQGQ GTAT GACACGGATIQ CTATGGGGCCAGGGAACCCTGGTrCACCGTCTCCTCA (SEQ ID NO:50) A4 LC 45 GATATTGTGATGACTCAGTCTCCACTCTCCC.TGCCCGTCACCCCTGTGAGAGCC.GG CCTCCATCTCCTGCAGG TCTGCAACTMCtXGATACTQGATACAACT-A 'ITTGA--rGGTACCTGCAGAAGCCAGGGCAGTCTCCAkCAGCTCCTGATCTATPii OR ...... CTCGGGTCCCTGACAGGTTCAGTGGCAGTGGGTCAGGCA CAGATPIACACTGAAAATCAGCAGAGTGGAGGCTGAGGATGTTGGGGTTTA1ITA SEA 2079156vl 0081428-000011 27 WO 2008/031061 PCT/US2007/07'7923 CTGCATGCAACCiTCTCAAACTC(CGTGCAG6'1TIGGCCAGGGGACCAAGCTGGAG ATCAAG (SEQ ID NO:49) 5 A5 HC CAGGTGCAGCrGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTG TCCCTCACCTGCACTGTGrCTGGd.TS-7ATCTGmTAT QAGCTGGAT CCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATrGGGTATATCTAtAGGO 10 GMAACACTCATCCTCCTCAATCGAGTCACCATATCAGTAGACAC GTCCAAGACCCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGiCGGACACGGCC GTGTATTACTGTGCGAGAeAAOATGA- CCT..T.ACACGGGGCCAGG GAACCCTGGTCACCGTCTCCTCAGCrTCCACCAAGGGCCCATCCGTCTrCCCCCT GGCGCCCTGCTCCAGGAGCACCTCCGAGAGCACAGCCGCCCTGGGCTGCCTGGT 15 CAAGGACTACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCATGCGCCCT (SEQ ID NO:66) A5 LC 20 GACATCGTGATGiACCCAGTCTCCAGACTCCCTGG~CTG3TGTCTCTGGGCGAG AGCG CCACCATCACCTGCAAGTCCAQCCAGGAGTATTTTATACAGITCCA)KAATAAGAA G-T ATAG-. TTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGCrGATCATTTAC TGGCATTATCOCAATCC'GGGGTCCCTGjACCGiATTCAGTGGjCAGCGGGTCTG GGACAGATTT'CACTCTCACCATCAACAGCCTGCAGGCrGAAGATGTGGCAGTTA 25 TTACTGTcAGcAAT'ATTATA(TACTCCGTGCACGITCGGCCAAGGGACCAAGGTGJ GAAATCAAA (SEQ TD NO:65) A6 HC 30 CAGGTGCAGCTACAGCAGTGGGGCGCAGGACTGTTGAAGICCTTCGGAGACCCTG TCCCTCACCTGCGCTGTCTAT.*GT.GGG T CT TGCTTACTACTOGTGGAT CCGCCAGCCCCCAGGGAAGGGACTGGAGTGGA'TGGGOAA. AAAA"TTGG3 GTCCAAGAACCAG'TCTC.CCTGAA ,GCTGAGiCTCTGjTGA.CCGCCGC.G.GA.CA.CGGCT 35 GTGTATTACTGTGCGAGAG-'J*TACAG-i'" .'N,......T.'GG. CT.*C ,ACGGCCAT G CTGGG GCCAGGGAACCCTGGTCACCGTCTCCTCA (SEQ ID NO: 82) A6 LC 40 GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAG TCACCATCACIIGCCGGGCAAG"T,.C-.A*:GAG**'.O*C",A:*TT'**A'G.CAACTATTAAATTGGTATCA GCAGAGACCAGGGAAAGCCCCTAAGCTCCTGATCTAT iCTACATCCAO'iTGCAA AG. t6GGGTCCCATCAAGGrCAGTGGCAGTGjGATCTGjGGACAGATllCA CTCTCA CCATCAGCAGTCTGCAACCTGAAGATTT'TGTAAGTTACTACTGTCAA(CAAOI"TA 45 , A-g AEI~cCG'TCGGCGGCGGGACCAAGG FGGAGAACAAA (SEQ ID NO:81) SEA 2079156v 1 008 1428-000011 28 WO 2008/031061 PCT/US2007/077923 A7 HC CAGGTGCAGCTGGTGGACTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTG AGACTCTCCTGTGCAGCGTCTGGATTCACCTTCA TTAGCTA TGOCATOCACTGGG 5 TCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATCTGOTATGATG GA ATACTGA ATAC TGCAGACTCCGTGAAOGCCGATTCACCATCTCCAGAG ACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACA CGGCTGTGTATTACTGTGCGAGAGA GA GGCAGTGGCTCT ACCACT A CGGT A TGG A ECTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA (SEQ ID NO:98) 10 A7 LC GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAG TCACCATCACTTGCCGGCjOCGTCANGGECAAGAEAATGATTTA'CiTGGTATCA 15 GCAGAAACCAGGGAAAGCCCCTAAGCGCCTGATCTATOCTGCETCCAGThJ'GC AAGOGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATTCACTCT CACAATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCTACAAC T A ATACTTACCCATTCACTTTCGGCCCTGGGACCAAAGTGGATATCAAA (SEQ ID NO:97) 20 A8 HC CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCCTCGGAGACCCTG TCCCTCACCTGCACTGTCTCTGGTGCTWECNCACAAGT1ECTAECTGAGT GGAT 25 CCGGCAGCCCCCAGGGAAGGGACTGOAOTGGATTGGGoAToEANTCTATTACAGT G NAAGANCAAT CCCTC NNCCTCAAAGGCGAGTCACCATATCAGTAGACAC GTCCAAGACCCAGTTCTCCCTGAAGCTGAGCTCTTGACCGCTGCGGACACGGCC GTGTATTACTGTGCGAGAGACAOTATAGCAGECCCCCTTTGEACTGGGGCCAGG GAACCCTGGTCACCGTCTCCTCA (SEQ ID NO: 114) 30 A8 LC GACATCGTGATGACCCAGTCTCCAGACTCCCTGGCTGTGTCTCTGGGCGAGAGGG CCACCATCACCTGCA AGTCCAGCCAGAGTATTTATACAGCTCCAACAATAAGAA 35 GTATCTAGTTTGGTACCAGCAGAAACCAGGACAGCCTCCTAAGTTGATCATTTAC TGGACATCTATCGGGAATCGGGGTCCCTGACCGATTCAGTGGCAGCGGGTCTG GGACAGATTTCACTCTCACCATCAGCAGCCTGCAGGCTGAAGATGTGGCAGTTTA TTACTGTCAGCA ATTTTAGTACTCCGTGGACGTCGGCCAAGGGACCAAGGTG GAAATCAAA (SEQ ID NO:113) 40 A9HC CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTG AGACTCTCCTGTGCAGCGTCTGGA TTCACCTTCAGTAGiTTACGCATGCACTGGG 45 TCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATG GAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAG ACAATTCCAAGAACACGCTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACA CGGCTGTGTATTACTGTGTGAGAAGTCGGAACTGGAACTACOACAACTACTACTA CCGGACOTNTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA (SEQ ID 50 NO: 130) SEA 2079156vl 0081428-000011 29 WO 2008/031061 PCT/US2007/077923 A9 LC GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAG 5 TCACCATCACTTJGCCQGGC6 AAG7'TCAGCQCAT TA UAAATAATTTAGGCTCGGTATCA GCAGAAACCAGGG AAAGCCCCTAAGCGCCTG A'TTATGjC-TG-CATCCAC'ftT10!3 AATGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGAATIFCACTPCT CACAATCAGCAGCCTGCAGCCTGAAGATTACAACTTATTACTGTL-CT.ACACAT A.' I AC.C, GGGACOiFJ'CGGCCAAGGGACCAAGGTGGAAATCAAA (SEQ ID 10 NO:129) A10 HC GAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTG3 15 AAGATCTCCTGTCAGGGTIFCTGG(ATACAGC. M-TI'ACCACCACIATGCTG TGCGCCAGATGCCCGGGAAAGGCC(--i((TG,-'GAGTGG.-'ATG3GGGAT'' C'ATCTATCCGGT A*-',lcTCTOwATAC*CAGAT A.CAGiCCCGTCCTf-TCC.AAOCCCAGGTCACCATCTCAGCCGA CAAGTCCAT'CAGCACCGCCITACCTIGCAGTGGAGCAGCCT'GAAGGCCTrcGGACAC CGCCATGTAIFJ 20 ACTGTGCGAGACAACCACT GGGTTTG AC AC'TGGGGCCAGGGAACCCTGGTCA CCGTCTCCTCA (SEQ ID NO: 146) A10 LC 25 TC'CTATGAGCTGACTCAGCCACCCTCAGTGTCCGTG'TCCCCAG'GACAGAC ACCCA GCATCACCTGCTC ,''TGAO.AzAAAI*TC300A(3 AGAAATCT(ITGTTC AGAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATC'AAC(7A ACCAACCCCCc CGGGATCCCTGAGCGATTJCTCTGGCTCCATITCTGGGAACACAGC(-CAC-T(CTGACC ATCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTATTGTCAGCG((TCOTGGGA 30 AGGAddcACGTAfTCGGCGGAGGGACCAAGCTGACCGTCCTA (SEQ ID NO: 145) All HC CAGGTGCAGCTGCAGGAGTC.GGGCCCAGGACTGGTGAAGCCTTCACAGACCCTG 35 TCCCTCACCTGCACTGTCTCTGTGOC3TCCATCAGCAG..TOGG...TCTG G.CTGGATCCGCCAGCACCCAGGGAAGGGCCTGYGAGTGGATTJGGGTACA-.TGT ACATCC4L~'CTAT Q CCTCCTAGA GAGTTIACCATATCAGT1 TGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGCAACTCTGTGACTGCCGCGGAC ACGGCCGTGTATTACTGTGCGCGC j 3 &MCOG TG(.A.CTATI'CGC(G.C-TGO3.CTT*CGA(GC 40t CTGGGCCAGGGAACCCTGGTCACCGTCTCCTCA (SEQ ID NO: 162) All1LC TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCA 45 GCATCACCTGCTCTGGAoATAAhIGGAAAFTcTTTGTTAC GAAGCCAGGCCAGTCCCCTGTGCTGGTCATCTATrCAAMATAACNAGCGCCC GGGATCCCTGAGCGA'IFJCTCTGGCTCCAACTCTGGTA ACACAGCCACTCTGTACCA TCAGCGGGACCCAGGCTATGGATGCGGCTGAC-TFFACTGTACTOAA CAGCACTTOOT7TCGGCGGAGGGACCAAGCTGACCGTCCTA (SEQ ID 50 NO:161) SEA 2079156v 10081428-000011 30 WO 2008/031061 PCT/US2007/077923 A12 HL CAGGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGi 5 AGACTCTCCTGTGTAGCGTCTCG.6TTCACCF'ATCCAQCAGATG TCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAQTTTAGGTATAT m AGTATAA!ATwAGcTCCGTGAGGCCGA7ITCATCATCTCCAGAG ACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACA CGGCTGTGTATTACTGTGCGAGAAGTCGACTGACTCCC.CTCA 10 QGTTGCIT:GGGGCCAAGGGACCACGGTCACCGTCTCCTCA (SEQ ID NO:178) A12 LC 15 GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATC.TGTA.GGAGACAGAG TCACCATCAC7FrGCCGGCAAQ",TCAOUCj-(,'fATFAAATOGAYF'TA IGCTGGTATCA GCAGAAACCAGGGAAAGCCCCTFAAGCGCCTrGATrCTIATG..-CTf.GCAT..C*AGTTCA -AAG.TOGGGTCCCATCAAGGTTCAGCGGCAGTGGATCTGGGACAGA.ATTCACTCT CACAATCAGCAGCCTGCAGCCTGAAGATTGTGCAAcT-rATTATTGTcTC AGCAT 20 A AT.AG ITATM ACCGTOWA CGTTCGGCCAAGGGC-ACCAAGGCTGCGAAATCAAA (SEQ ID NO: 177) A13 HC 25 CAGOTTCAGCTGGTGCAGTCTGGAGCTG-AGGTGAAGAAGCCTGGGGCCTCAGTG AAGGTCTCCTGCAAGGCTTCT*GfTACACC(TTTA(CAG CTAT'GTATCAG.C.TGGG TGCGACAGGCCCCTGGACAAGGG(CTTGAGAGGATGGGAG 6A T C J.TTC ACACATCAACGACCACAGCCTACATG-GACTIGAGiGAGCCTGAGATCTG-ACGiACA 30 CGGCCGTGTATTACTGTGCGAGAGAXAAOA'UACTATQA. AM.TGTGC CCACGGGCCAGGACCCTGTCCCGCTCTCA(SEQ ID N6:194) A13 LC 35 TCCTATGAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCA GCATCACCTGCTCG* G ATIM:.:. AAA MTITPfGGTATCAGCA GAAGCCAGGCCAGTCCCCTGAACTGGTCATCTAT.CTAGATA-CAOOCTA GGGATrCCCTGAGCGATT-CTC'GGc1rCCAAC1CTGGGAACACAGCCAC1XZTIGA(CCA TCAGCGGGACCCAGGCTATGGATGAGGCTGACTATTACTGT A GCGGCcAA 40 GcACAGGGTAb TTCGCGGCAGCGACCAAACTGACCGTCCTG (SEQ ID NO: 193) A14 HC CAGGTTCAGCTGGTGCAATCTGGAGCTGAGGTGAAGAAGCCTGGGGCC *TCAGTG 45 AAGGTCTCCTGCAAGACTTCTi GQITACTr.i.CQ3T07A'' CAT..ATAGTGGG TGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATCGGGA'tGAACC[TA A~cCTACACAAATOPiAAAATCAOCAATACAGCAA ACAAATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGCGATCTGACGACA CGGCCGTGTA~rACTGTGCGAGAGAtCAAMTATaTOATAGTAG~(TGYPCGGAd 50 CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCG (SEQ ID NO:21 0) SEA 2079156v 10081428-000011 31 WO 2008/031061 PCUIUS2007/077923 A14 LC TCCTAT'GAGCTGACTCAGCCACCCTCAGTGTCCGTGTCCCCAGGACAGACAGCCT 5 CCATCACCTG CCGGGTAAT GGCATAAA- T OC'I GGTATCAGCA GAAGCCAGGCC A GTC CCCTGTG.CTGGTCTTCTATCA-fGATACCA AGCGG'cCtCA GGGATCCCTGAGCGA7FICTCTGGCTCCAACTCTGGGAACACAGCCACTCTGACCA
TCAGCGGGACCCAGGCTATGGATGAGGCTGACTATCACTGTCAGGCGTGGGACA--
G"dGCAGO'T'TCGGCGGAGGGACCAAGCTGACCGTCCTAC (SEQ ID NO:209) 10 Antibodies A1-A14 amino acid sequences, light chain variable regions. CDR regions are shaded and underlined; the intervening segments or regions are referred to as framework (FR) herein. 15 Al SYEVTQAPSVSVSPGQTASITCSG1) LYAGC-WY QQKPGQS PVLVIY.QID&S P ERFSGSNSGNTATLTISGTQAMDEADYYCO* STAFGGGTKLT1VL (SEQ ID NO:9) 20 A2 DIQMTQSPSSLSASVGDRVTrrCRASOG(iIRNNLCGWYQQKPGKAPKRLIYAASSLOS.G VPSRFSGSGSGTEFrLTISSLQPEDFrTYYCLQHNSYPWTFGQGTKVEIK (SEQ ID 25 NO:25) A3 DIQMTQSPSSLSASVGDRVTITORASOGIRNDLGWYQQKPGKAPKRLIYA& SLOQSCI VPSRFSGSGSGTEFrLTISSLQPEDFATYYCRQNTPLFGGGTKVEIK(SEQ ID 30 NO:41) A4 DIVMTQSPLSLPVTPGEPASISCRSOLLNTG VYDYLQKPGQSPQLLIYLGSFR 35 ASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYC MALO._TPCSFGQGTKLEIK (SEQ ID NO:57) A5 DIVMTQSPDSLAVSLGERATITCKSSSISSKYLWYQQKPGQPPKLIIYWT 40MRSGPRGGGTFLILQEVVYOYSWTGQTVI (SEQ EID NO:73) A6 DIQMTQSPSSLSASVGDRVTITC.RASOSISNYLNW..YQQRPGKAPKLLIYA-FSSkOSGV 45 PSRFSGSGSGTDFTLTISSLQPEDFVSYYCi O&SSI$PFGGGTKVEN K (SEQ ID NO:89) SEA 2079156v 10081428-000011 32 WO 2008/031061 PCT/US2007/077923 A7 DIQMTQSPSSLSASVGDRVTITCPRAGOGJRPNDL..VWYQQKPGKAPKRLIY AASLS VPSRFSGSGSGTEFTLTISSLQPEDFATYYGLHNYPFGPGTKVDIK (SEQ ID NO: 105) 5 A8 DIVMTQSPDSLAVSLGERATJTCIKSSO SILYS SXNKK YLYWYQQKPGQPPKLIIYT MGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQ.YYS.TP-IWTGQGTKVEIK (SEQ ED NO: 12 1) 10 A9 DIQMTQSPSSLSASVGDRVTITCRAQERNGYQQKPGKAPKRLIY AASLQS VPSRFSGSGSGTEFTLTISSLQPEDFTTYYC QNYWFGQGTKVEIK (SEQ ID NO: 137) 15 A10 SYELTQPPSVSVSPGQTASITCSOE'LKWGE.C~'tKYACWYQQKPGQSPVLVIYODTKRPSGIP ERFSGSISGNTATLTISGTQAMDEADYYCOA.kRSTVFGGGTKLTVL (SEQ ID NO: 153) 20 All SYELTQPPSVSVSPGQTASITCSGDJ')KLI(PAPWUYQLKPGQSPVLVIYODNKJ'U-PSGIP ERFSGSNSGNTATLTISGTQAMDAADFYC '."-'WIDSSVFGTLV SQ NO: 169) 25 A12 DIQMTQSPSSLSASVGDRVTITCRBASOGm.NDLGCWYQQKPGKAPKRLIYAASSLOSG VPSRFSGSGSGTEFTLTISSLQPEDCATYYCLOUNSYTWTF__GQGTKVEIK (SEQ ID NO: 185) 30 A13 SYELTQPPS VS VSPGQTASITCSG7DKLGDKYVC-WYQQKPGQSPELVIYLDNKRZPSGIP ERFS GSNSGNTATLTISGTQAMDEADYYC AWJS.T'VFGGGTKLTVL (SEQ ID NO:201) 35 A14 SYELTQPPS VS VSPGQTASITC. ,.Jk"1-,DK.YAFWYQQKPGQSPVLVFYHD]TKlRPSGIP ERFSGSNSGNTATLTISGTQAMDEADYHCpAWJ2IsSTVFGGGTKLTVL (SEQ MD NO:217) 40 Antibodies AI-A14, amtino acid sequences of heavy chain variable regions. CDR regions are shaded and underlined, the other regions are referred to as framework (FR) herein Al 45 QVQLVQSGAEV KKI"GASVKVSCKASG'YTT' T8YGLS.WVRQAPGQGLEWMC,)NIIPYN GNTN kQ.diQRVTMTTDTSTSTAYMELRSLRSDDTAVYFCAR -1....1. 0Y .VNYDAEDI WGQGTMVTVSS (SEQ ID NO: 10) SEA 2079156v 10081428-000011 33 WO 2008/031061 PCU/US2007/077923 A2 QVQLVESGGGVVQPGRSLRLSCAASGEFSSYMHWVRQAPGKGLEWVAV WG 9NJKYEA SVKGRFrISRDNSKNTLYLQVNSLRAEDTAVYYCVR-'SRNW NYDNYYG LDWGQGTTVTVSS (SEQ ID NO:26) 5 A3 EVQLVESGGGLVQPGGSLRLSCAASOFFSWSVQPKLCAIOG EEYYVDSV.KG-'.RFTISRDNAKNSLYLQMNSLRAEDTAVYYCARG SNWYYYNY0mD VWGQGTTJVTVSS (SEQ ID NO:42) 10 A4 QVQLQSGEVKKGASKVSCASGTFTYMIWVRQAPGQGLEWMGWIN'P*NS -,G-NYAQKF .. G.RVTMTRDTSISTAYMELSRLRSDDTAVYFCARDGSWHY WGQGTLVTVSS (SEQ ID NO:58) 15 A5 QVQLQESGPGLVKPSETLSLTCTVSGG'(S !NYIWS WIRQPPGKGLEWIGYtYYSG-STN -Y-NPS-8 VTISVDT'SKT'QFSLKLSsvTrAADT'AVYYCAR-DSi IAAPFDYWGQGTLVTV SS.(SEQ ID NO:74) 20 A6 QVQLQQWGAGLLKPSETLSLTCAVYGGSF 5AYYW~lSWIRQPPGKGLEwJGEI--NI{$GG TNNPLKRVTISVDTS KNQFSLKLSSVTAADTAVYYCAR"VOWLELA"YFDYWGQG TLVTVSS (SEQ ID NO:90) 25 A7 QVQLVDSGGGVVQPGRSLRLSCAASGETFSYGI.-WVRQAPGKGLEWVA.-N/WYI)( S~hYADSKGRr-TISRDNSKNTLYLQMNSLRAEDTAVYYCARERQWLYIhYGIMV WGQGTrVTVSS (SEQ ID NO: 106) 30 A8 QVQLQESGPGLVKPSETLSLTCTVSGGSJN SFYWSI QPMGEIYYsGTN YNPL~RVTISVD-fSKTQFSLKLSSVTAADTAVYYCARDSIAAPPDYWGQGTLVTV S S (SEQ ID NO: 122) 35 A9 9VQLVESGGGVVQPGRSLRLSCAAS.,C 1SSYOMHWVRQAPGK.GLEW.VAVIWYD. LDVWGQGTTVTVSS (SEQ ID NO: 138) 40 A10 EVQLvQSGAEvKKPGESLKISCQGSGYST.Y.W~VRQMPGKGLEWMGIIYPGDS DTaYPfQGEQVTISADKSISTAYLQWS SLKASDTAMYYCAROGLGPDYGQGTLV TVSS (SEQ ID NO: 154) 45 All QVQLQESGPGLVKPSQTLSLTCTVSGOSISSGCYYWSWIRQHPGKGLEWIGYISYSG rTYYIP RVTISVDTS KNQFSLKLNSVTAADTAVYYCARAYG DYR Vff*WGQ GTLVTVSS (SEQ ID NO: 17 0) 50 SEA 2079156v1 0081428-000011 34 A12 QVQLVESGGGVVQPGRSLRLSCVASGFTFSAYGMHWVRQAPGKGLEWVAVIWYD GSNKYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCARSRNWNYDSYQY GLDVWGQGTTVTVSS (SEQ ID NO:186) A13 QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLERMGWISAYN GNTNYAQKFOGRVTMTTDTSTTTAYMELRSLRSDDTAVYYCARDQDYYDSSGWG HWGQGTLVTVSS (SEQ ID NO:202) A14 QVQLVQSGAEVKKPGASVKVSCKTSGYTFTSYGISWVRQAPGQGLEWMGWISPYN GNTNYAQKFOGRVTMTTDKSTSTAYMELRSLRSDDTAVYYCARDODYYDSSGWDP WGQGTLVTVSS (SEQ ID NO:218) CDR consensus sequences for Antibodies A1-A14. Light Chain CDR1 Sequence L4 R S S Q S L L H S T G Y N - Y L D (SEQIDNO:253) L5, L8 KS S Q S I LYS SNN KKYLV(SEQIDNO:75) CONSENSUS: XIS S Q S X 2
LX
3
SX
4
X
5
X
6
X
7
X
8
YLX
9 (SEQIDNO:115) X, is an arginine residue or a lysine residue,
X
2 is a leucine residue or a isoleucine residue,
X
3 is a histidine residue or a tyrosine residue,
X
4 is a threonine residue or a serine residue,
X
5 is a glycine residue or an asparagine residue,
X
6 is a tyrosine residue or an asparagine residue,
X
7 is an asparagine residue or a lysine residue,
X
8 is a lysine residue or no residue,
X
9 is an aspartate residue or a valine residue L2, L9 R A S Q G I R N N L G(SEQIDNO:27) L3, L12 R A S Q G I R N D L G(SEQIDNO:43) L6 R A S Q S I S N Y L N(SEQIDNO:91) L7 R A G Q G I R N D L V(SEQIDNO:107) CONSENSUS: R A Xio Q X 11
IX
1 2 N X 13
LX
1 4 (SEQ ID NO:116) 35
X
10 is a serine residue or a glycine residue, XI is a serine residue or a glycine residue,
X
1 2 is a serine residue or an arginine residue, 5 X 1 3 is a tyrosine residue, an aspartate residue, or an asparagine residue
X
1 4 is an aspartate residue, a valine residue, or a glycine residue Li S G D K L G D K Y A C(SEQIDNO:11) L1O S G E K W G E K Y A C(SEQIDNO:155) Lll S G D K L G D K F A F(SEQIDNO:171) L13 S G D K L G D K Y V C(SEQIDNO:203) L14 S G D K L G D K Y A F(SEQIDNO:219) CONSENSUS: S G X 1 5 K X 1 6 G X 1 7
KX
18 Xi 9
X
20 (SEQ ID NO: 123)
X
15 is a glutamate residue or an aspartate residue,
X
16 is a tryptophan residue or a leucine residue,
X
1 7 is a glutamate residue or an aspartate residue, X18 is a tyrosine residue or a phenylalanine residue,
X
1 9 is an alanine residue or a valine residue,
X
20 is a cysteine residue or a phenylalanine residue Light Chain CDR2 Sequence L2 A T S S L Q S (SEQ ID NO:92) L3, L6, L7, L9, L12 A A S S L Q S (SEQ ID NO:44) L5, L8 W T S M R E S(SEQIDNO:76) L4 L G S F R A S (SEQ ID NO:254) CONSENSUS: X 4
OX
4 1
SX
42
X
43
X
44 S (SEQ ID NO:124)
X
40 is an alanine residue, a tryptophan residue, or a leucine residue,
X
4 1 is a threonine residue, an alanine residue, or a glycine residue,
X
42 is a serine residue, a methionine residue, or a phenylalanine residue,
X
43 is a leucine residue or an arginine residue, 5 X 44 is a glutamine residue, a glutamate residue, or an alanine residue L1O Q D T K R P S(SEQIDNO:156) Lll Q D N K R P S(SEQIDNO:172) 36 L8 Q O Y Y S T P W T(SEQIDNO:125) CONSENSUS: X 73
QX
7 4X 75 X76X 77
X
7 8X79X80 (SEQ ID NO:132)
X
73 is a methionine residue, a glutamine residue, or an arginine residue,
X
74 is an alanine residue, a tyrosine residue, a glutamine residue, or a serine residue,
X
7 5 is a leucine residue, a tyrosine residue, or an asparagine residue,
X
76 is a glutamine residue, a serine residue, or a threonine residue,
X
77 is a threonine residue, a tyrosine residue, or an isoleucine residue,
X
78 is a proline residue or a serine residue,
X
79 is a cysteine residue, a tryptophan residue, a leucine residue, or a proline residue, Xgo is a serine residue or a threonine residue Heavy Chain CDR1 Sequence H5 G G SIN S-- FYWS(SEQIDNO:78) H6 G G S F S A - - Y Y W S (SEQ ID NO:94) H8 G G S I N S - - F Y W S (SEQ ID NO:126) H1I G G S I S S G G Y Y W S(SEQIDNO:174) CONSENSUS: G G SX 21 X2 2 X2 3 X2 4
X
25 X2YW S (SEQ ID NO:252)
X
2 1 is an isoleucine residue or a phenylalanine residue
X
22 is an asparagine residue or a serine residue
X
23 is a serine residue or an alanine residue
X
24 is a glycine residue or no residue
X
25 is a glycine residue or no residue
X
26 is a phenylalanine residue or a tyrosine residue H7 G F T F I S Y G M H(SEQIDNO:110) H4 G Y T F T G Y Y I H (SEQ ID NO:256) H2,H9 G F T F S S Y G M H (SEQ ID NO:30) HIO G Y S F T S Y W I G (SEQ ID NO:158) CONSENSUS: G X 27
X
28
FX
29
X
30
YX
3 lX 32
X
33 (SEQ ID NO:257)
X
27 is a tyrosine residue or a phenylalanine residue,
X
28 is a threonine residue or a serine residue,
X
29 is a threonine residue,a serine residue, or an isoleucine residue,
X
30 is a glycine residue or a serine residue,
X
3 1 is a tyrosine residue, a glycine residue, or a tryptophan residue,
X
32 is an isoleucine residue or a methionine residue, 38
X
33 is a histidine residue or a glycine residue H13 G Y T F T S Y G L S (SEQIDNO:62) H12 G F T F S A Y G M H(SEQIDNO:190) H3 G F T F S S Y W M S (SEQ ID NO:46) H1, H14 G Y T F T S Y G I S (SEQ ID NO:206) CONSENSUS: GX 34
TFX
35
X
36
YX
37
X
3 8
X
39 (SEQ ID NO: 140)
X
34 is a tyrosine residue or a phenylalanine residue,
X
35 is a threonine residue or a serine residue,
X
36 is a serine residue or an alanine residue,
X
37 is a glycine residue or a tryptophan residue,
X
38 is a leucine residue, a methionine residue, or an isoleucine residue,
X
39 is a serine residue or a histidine residue Heavy Chain CDR2 Sequence HI YI SYS G S TYYNP SLKS(SEQIDNO:175) H5 Y I Y Y S G S T N Y N P S L K S (SEQ ID NO:79) H6 E I N H S G G T N Y N P S L K S(SEQIDNO:95) H8 Y I Y Y S G S T N Y N P S L K R(SEQIDNO:127) CONSENSUS: X 47 I X 48
X
49 S G X 5 o T X 51 Y N P S L K X 5 2 (SEQ ID NO:142)
X
47 is a tyrosine residue or a glutamate residue,
X
48 is a serine residue, a tyrosine residue, or an asparagine residue,
X
49 is a tyrosine residue or a histidine residue
X
50 is a serine residue or a glycine residue,
X
51 is a tyrosine residue or an asparagine residue,
X
5 2 is a serine residue or an arginine residue 39 H2, H9 V I W Y D G S N K Y H A D S V K G(SEQIDNO:31) H12 V I W Y D G S N K Y Y A D S V K G(SEQIDNO:191) H3 N I K Q D G S E E Y Y V D S V K G(SEQIDNO:47) H7 V I W Y D G S T E Y Y A D S V K G(SEQIDNO:111) CONSENSUS: X 5 3 I X 54
X
55 D G S X 56
X
5 7 Y X 58
X
59 D S V K G (SEQ ID NO: 179)
X
53 is an asparagine residue or a valine residue,
X
54 is a tryptophan residue or a lysine residue,
X
55 is a tyrosine residue or a glutamine residue,
X
56 is an asparagine residue, a glutamate residue, or a serine residue,
X
57 is a lysine residue or a glutamate residue,
X
58 is a histidine residue or a tyrosine residue,
X
59 is an alanine residue or a valine residue H4 W I N P N S G G T N Y A Q K F Q G (SEQIDNO:258) HI W II P Y N G N T N S A Q K L Q G (SEQIDNO:63) H13 W I S A Y N G N T N Y A Q K F Q G (SEQIDNO:207) H14 WISPYNGNTNYAQKFQG (SEQIDNO:259) HIO I I Y P G D S D T R Y S P S F Q G(SEQIDNO:159) CONSENSUS: X 6 0 I X 61
X
62
X
63
X
6 4
X
65
X
66 T X 67
X
68
X
69
X
70
X
71
X
72 Q G (SEQ ID NO:180)
X
60 is a tryptophan residue or an isoleucine residue,
X
61 is an asparagine residue, an isoleucine residue, a serine residue, or a tyrosine residue,
X
6 2 is a proline residue or an alanine residue,
X
6 3 is an asparagine residue, a tyrosine residue, or a glycine residue,
X
64 is a serine residue, an asparagine residue, or an aspartate residue,
X
6 5 is a glycine residue or a serine residue,
X
6 6 is a glycine residue, an asparagine residue, or an aspartate residue,
X
67 is an asparagine residue or an arginine residue,
X
6 8 is a tyrosine residue or a serine residue,
X
69 is an alanine residue or a serine residue
X
70 is a glutamine residue or a proline residue,
X
71 is a lysine residue or a serine residue,
X
72 is a phenylalanine residue or a leucine residue 40 Heavy Chain CDR3 Sequence H5, H8 - - D S I A A P F D Y(SEQIDNO:80) H6 V Q W L E L A Y F D Y(SEQIDNO:96) H1O - - - - O G L G F D Y(SEQIDNO:160) CONSENSUS: X 8 7
X
88
X
8 9
X
9 oX 9 1
X
92
X
93
X
94 FDY (SEQ ID NO: 187)
X
87 is a valine residue or no residue,
X
88 is a glutamine residue or no residue,
X
89 is an aspartate residue, a tryptophan residue, or no residue,
X
90 is a serine residue, a leucine residue, or no residue,
X
91 is an isoleucine residue, a glutamate residue, or a glutamine residue,
X
9 2 is an alanine residue, a leucine residue, or a glycine residue,
X
93 is an alanine residue or a leucine residue,
X
94 is a proline residue, a tyrosine residue, or a glycine residue H13 D Q D Y Y D S S G W - G H(SEQIDNO:208) H14 D Q D Y Y D S S G W - D P (SEQIDNO:224) HI - - A Y G D Y R G W F D P(SEQIDNO:176) CONSENSUS: X 9 5
X
9 6
X
9 7 Y X 98 D X 99
X
100 G W Xio; X 102
X
10 3 (SEQ ID NO:188)
X
95 is an aspartate residue or no residue,
X
96 is a glutamine residue or no residue,
X
97 is an aspartate residue or an alanine residue,
X
98 is a tyrosine residue or a glycine residue,
X
99 is a serine residue or a tyrosine residue, Xioo is a serine residue or an arginine residue,
X
1 o 1 is a phenylalanine residue or no residue,
X
102 is a glycine residue or an aspartate residue,
X
10 3 is a histidine residue or a proline residue 41 H4 - - - D S G Y S S S W H F D Y - (SEQ ID NO:260) HI - - - D R D Y G V N Y D A F D I (SEQIDNO:64) H2 - S R N W N Y D N Y Y Y G L D V(SEQIDNO:32) H12 - S R N W N Y D S Y Q Y G L D V(SEQIDNO:192) H9 - S R N W N Y D N Y Y Y G L D V(SEQIDNO:144) H3 G S S S WY Y- Y N G M D V - (SEQ ID NO:261) H7 - E R QW L Y - H Y G M D V(SEQIDNO:112) CONSENSUS: X 104
X
1 05
X
1 06
X
1 07
X
1 08
X
1 09
YX
1 0 X I 1
X
112
X
1 3 X 14 X 15 Xi 16 X 17
XI
1 8s (SEQ ID NO:249)
X
10 4 is a glycine residue or no residue
X
1 05 is a serine residue, a glutamate residue, or no residue
X
106 is an arginine residue, a serine residue, or no residue,
X
107 is an aspartate residue, an asparagine residue, a serine residue, or a glutamine resiude
X
108 is a serine residue, an arginine residue, or a tryptophan residue,
X
1 09 is a glycine residue, an aspartate residue, an asparagine residue, a tyrosine residue, or a leucine residue,
X
11 0 is a serine residue, a glycine residue, an aspartate residue, or no residue, X, I is a serine residue, a valine residue, an asparagine residue, or a tyrosine residue,
X
112 is a serine residue, an asparagine residue, a tyrosine residue, or a histidine residue
X
113 is a tryptophan residue, a tyrosine residue, or a glutamine residue,
X
114 is a histidine residue, an aspartate residue, a tyrosine residue, or no residue,
X
5 is a phenylalanine residue, an alanine residue, or a glycine residue,
X
1 16 an aspartate residue, a phenylalanine residue, a leucine residue, or a methionine residue
X
117 a tyrosine residue, or an aspartate residue,
X
118 is an isoleucine residue, a valine residue, or no residue In one embodiment, the present invention provides an antigen binding protein comprising a light chain variable domain comprising a sequence of amino acids that differs from the sequence of a light chain variable domain selected from the group consisting of LI through L14 only at 15, 14, 13, 12, 11, 10, 9, 8, 7, 6, 5, 4, 3, 2, or 1 residues, wherein each such sequence difference is independently either a deletion, insertion, or substitution of one amino acid residue. In another embodiment, the light-chain variable domain comprises a sequence of amino acids that is at least 70%, 75%, 80%, 85%, 90%, 95%, 97%, or 99% identical to the sequence of a light chain variable domain selected from the group consisting of L1-L14. In another embodiment, the light chain variable domain comprises a sequence of 42 WO 2008/031061 PCT/US2007/077923 amino acids that is encoded by a nucleotide sequence that is at least 70%, 75%, 80%, 85%, 90%, 95%, 97%, or 99% identical to a nucleotide sequence that encodes a light chain variable domain selected from the group consisting of L1-L14 (which includes L1, L2, L3, L4, L5, L6, L7, L8, L9, Li, L1, L12, L13, and L14). In another embodiment, the light chain 5 variable domain comprises a sequence of amino acids that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to the complement of a polynucleotide that encodes a light chain variable domain selected from the group consisting of L1-L14. In another embodiment, the light chain variable domain comprises a sequence of amino acids that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to 10 the complement of a polynucleotide that encodes a light chain variable domain selected from the group consisting of Li-L14. In another embodiment, the light chain variable domain comprises a sequence of amino acids that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to a complement of a light chain polynucleotide of LI L14. 15 In another embodiment, the present invention provides an antigen binding protein comprising a heavy chain variable domain comprising a sequence of amino acids that differs from the sequence of a heavy chain variable domain selected from the group consisting of H1-H14 only at 15, 14, 13, 12, 11, 10, 9, 8, 7, 6, 5, 4, 3, 2, or 1 residue(s), wherein each such sequence difference is independently either a deletion, insertion, or 20 substitution of one amino acid residue. In another embodiment, the heavy chain variable domain comprises a sequence of amino acids that is at least 70%, 75%, 80%, 85%, 90%, 95%, 97%, or 99% identical to the sequence of a heavy chain variable domain selected from the group consisting of H1-H14. In another embodiment, the heavy chain variable domain comprises a sequence of amino acids that is encoded by a nucleotide sequence that is at least 25 70%, 75%, 80%, 85%, 90%, 95%, 97%, or 99% identical to a nucleotide sequence that encodes a heavy chain variable domain selected from the group consisting of H1-H14. In another embodiment, the heavy chain variable domain comprises a sequence of amino acids that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to the complement of a polynucleotide that encodes a heavy chain variable domain selected 30 from the group consisting of H1-H14. In another embodiment, the heavy chain variable domain comprises a sequence of amino acids that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to the complement of a polynucleotide that encodes a heavy chain variable domain selected from the group consisting of H1-H14. In another embodiment, the heavy chain variable domain comprises a sequence of amino acids SEA 2079156vl 0081428-000011 43 WO 2008/031061 PCT/US2007/077923 that is encoded by a polynucleotide that hybridizes under moderately stringent conditions to a complement of a heavy chain polynucleotide selected from SEQ ID NO: 10, 26, 42, 58, 74, 90, 106, 122, 136, 154, 170, 186, 202, and 218. Particular embodiments of antigen binding proteins of the present invention 5 comprise one or more amino acid sequences that are identical to the amino acid sequences of one or more of the CDRs and/or FRs 'referenced herein for example, one or more CDR or FR from one or more of SEQ ID Nos: 9-16, 22, 25-32, 36, 41-48-57-62, 64,73-80, 89-91, 93-96, 105-107, 109-112, 115, 116, 121-128, 131, 132, 134, 137-142, 144, 153-160, 169-176, 179, 180, 185-192, 201-208, 217-220, and 223. In one embodiment, the antigen binding protein 10 comprises a light chain CDR1 sequence illustrated above. In another embodiment, the antigen binding protein comprises a light chain CDR2 sequence illustrated above, In another embodiment, the antigen binding protein comprises a light chain CDR3 sequence illustrated above. In another embodiment, the antigen binding protein comprises a heavy chain CDR1 sequence illustrated above. In another embodiment, the antigen binding protein comprises a 15 heavy chain CDR2 sequence illustrated above. In another embodiment, the antigen binding protein comprises a heavy chain CDR3 sequence illustrated above. In another embodiment, the antigen binding protein comprises a light chain FRI sequence illustrated above. In another embodiment, the antigen binding protein comprises a light chain FR2 sequence illustrated above. In another embodiment, the antigen binding protein comprises a light chain 20 FR3 sequence illustrated above. In another embodiment, the antigen binding protein comprises a light chain FR4 sequence illustrated above, In another embodiment, the antigen binding protein comprises a heavy chain FRI sequence illustrated above. In another embodiment, the antigen binding protein comprises a heavy chain FR2 sequence illustrated above. In another embodiment, the antigen binding protein comprises a heavy chain FR3 25 sequence illustrated above. In another embodiment, the antigen binding protein comprises a heavy chain FR4 sequence illustrated above. In one embodiment, the present invention provides an antigen binding protein that comprises one or more CDR sequences that differ from a CDR sequence shown above by no more than 5, 4, 3, 2, or 1 amino acid residues. 30 In another embodiment, at least one of the antigen binding protein's CDR3 sequences is a CDR3 sequence from Al-A14, as shown in Table 1 or Table 2. In another embodiment, the antigen binding protein's light chain CDR3 sequence is a light chain CDR3 sequence from Al-A 14 as shown Table I and the antigen binding protein's heavy chain CDR3 sequence is a heavy chain sequence from AI-A14 as shown in Table 2, In another SEA 2079156vl 0081428-000011 44 embodiment, the antigen binding protein comprises 1, 2, 3, 4, or 5 CDR sequence(s) that each independently differs by 6, 5, 4, 3, 2, 1, or 0 single amino acid additions, substitutions, and/or deletions from a CDR sequence of Al-A14, and the antigen binding protein further comprises 1, 2, 3, 4, or 5 CDR sequence(s) that each independently differs by 6, 5, 4, 3, 2, 1, or 0 single amino acid additions, substitutions, and/or deletions from a CDR sequence. The light chain CDR's of antibodies Al-A14 are shown below in Table 1, and the heavy chain CDR's of antibodies AI-A14 are shown below in Table 2. Table 1 Li ht Chain Antibody CDR1 CDR2 CDR3 Al SGDKLGDKYAC QDSKRPS QAWDSSTAV (SEQ ID NO: 1l) (SEQ ID NO:12) (SEQ ID NO: 13) A2 RASQGIRNNLG AASSLQS LQHNSYPWT (SEQ ID NO:27) (SEQ ID NO:28) (SEQ ID NO:29) A3 RASQGIRNDLG AASSLQS RQQNTYPLT (SEQ ID NO:43) (SEQ ID NO:44) (SEQ ID NO:45) A4 RSSQSLLHSTGYNYLD LGSFRAS MQALQTPCS (SEQ ID NO:253) (SEQ ID NO:254) (SEQ ID NO:255) A5 KSSQSILYSSNNKKYLV WTSMRES QQYYSTPWT (SEQ ID NO:75) (SEQ ID NO:76) (SEQ ID NO:77) A6 RASQSISNYLN ATSSLQS QQSYSISPT (SEQ ID NO:91) (SEQ ID NO:92) (SEQ ID NO:93) A7 RAGQGIRNDLV AASSLQS LQHNTYPFT (SEQ ID NO: 107) (SEQ ID NO:44) (SEQ ID NO: 109) A8 KSSQSILYSSNNKKYLV WTSMRES QQYYSTPWT (SEQ ID NO:75) (SEQ ID NO:76) (SEQ ID NO: 125) A9 RASQGIRNNLG AASSLQS LQHNSYPWT (SEQ ID NO:27) (SEQ ID NO:44) (SEQ ID NO: 141) A10 SGEKWGEKYAC QDTKRPS QAWDRSTV (SEQ ID NO:155) (SEQ ID NO: 156) (SEQ ID NO: 157) All SGDKLGDKFAF QDNKRPS QAWDSSTVV (SEQ ID NO: 171) (SEQ ID NO: 172) (SEQ ID NO: 173) A12 RASQGIRNDLG AASSLQS LQHNSYTWT (SEQ ID NO:43) (SEQ ID NO:44) (SEQ ID NO: 189) A13 SGDKLGDKYVC LDNKRPS QAWDSSTV (SEQ ID NO:203) (SEQ ID NO:204) (SEQ ID NO:205) A14 SGDKLGDKYAF HDTKRPS QAWDSSTV (SEQ ID NO:219) (SEQ ID NO:220) (SEQ ID NO:205) 45 Table 2 Heavy Chain Antibody CDR1 CDR2 CDR3 Al GYTFTSYGLS WIIPYNGNTNSAQKLQ DRDYGVNYDAFDI (SEQ ID NO:62) G (SEQ ID NO:63) (SEQ ID NO:64) A2 GFTFSSYGMH VIWYDGSNKYHADSV SRNWNYDNYYYGL (SEQ ID NO:30) KG (SEQ ID NO:3 1) DV (SEQ ID NO:32) A3 GFTFSSYWMS NIKQDGSEEYYVDSVK GSSSWYYYNYGMD (SEQ ID NO:46) G (SEQ ID NO:47) V (SEQ ID NO:48) A4 GYTFTGYYIH WINPNSGGTNYAQKF DSGYSSSWHFDY (SEQ ID NO:256) QG (SEQ ID NO:258) (SEQ ID NO:260) A5 GGSINSFYWS YIYYSGSTNYNPSLKS DSIAAPFDY (SEQ ID NO:78) (SEQ ID NO:79) (SEQ ID NO:80) A6 GGSFSAYYWS EINHSGGTNYNPSLKS VQWLELAYFDY (SEQ ID NO:94) (SEQ ID NO:95) (SEQ ID NO:96) A7 GFTFISYGMH VIWYDGSTEYYADSV ERQWLYHYGMDV (SEQ ID NO:1 10) KG (SEQ ID NO: 111) (SEQ ID NO:1 12) A8 GGSINSFYWS YIYYSGSTNYNPSLKR DSIAAPFDY (SEQ ID NO:126) (SEQ ID NO:127) (SEQ ID NO:80) A9 GFTFSSYGMH VIWYDGSNKYHADSV SRNWNYDNYYYGL (SEQ ID NO:30) KG (SEQ ID NO:3 1) DV (SEQ ID NO: 144) AlO GYSFTSYWIG IIYPGDSDTRYSPSFQG QGLGFDY (SEQ ID NO: 158) (SEQ ID NO: 159) (SEQ ID NO: 160) All GGSISSGGYYWS YISYSGSTYYNPSLKS AYGDYRGWFDP (SEQ ID NO: 174) (SEQ ID NO: 175) (SEQ ID NO: 176) A12 GFTFSAYGMH VIWYDGSNKYYADSV SRNWNYDSYQYGL (SEQ ID NO:190) KG (SEQ ID NO:191) DV (SEQ ID NO: 192) A13 GYTFTSYGIS WISAYNGNTNYAQKF DQDYYDSSGWGH (SEQ ID NO:206) QG(SEQ ID NO:207) (SEQ ID NO:208) A14 GYTFTSYGIS WISPYNGNTNYAQKF DQDYYDSSGWDP (SEQ ID NO:206) QG (SEQ ID NO:259) (SEQ ID NO:224) The nucleotide sequences of Al -A14, or the amino acid sequences of Al-A14, can be altered, for example, by random mutagenesis or by site-directed mutagenesis (e.g., oligonucleotide-directed site-specific mutagenesis) to create an altered polynucleotide comprising one or more particular nucleotide substitutions, deletions, or insertions as compared to the non-mutated polynucleotide. Examples of techniques for making such alterations are described in Walder et al., 1986, Gene 42:133; Bauer et al. 1985, Gene 37:73; Craik, BioTechniques, January 1985, 12-19; Smith et al., 1981, Genetic Engineering: Principles and Methods, Plenum Press; and U.S. Patent Nos. 4,518,584 and 4,737,462. These and other methods can be used to make, for example, derivatives of anti-activin A 46 WO 2008/031061 PCT/US2007/077923 antibodies that have a desired property, for example, increased affinity, avidity, or specificity for activin A, increased activity or stability in vivo or in vitro, or reduced in vivo side-effects as compared to the underivatized antibody. Other derivatives of anti-activin A antibodies within the scope of this 5 invention include covalent or aggregative conjugates of anti-activin A antibodies, or fragments thereof, with other proteins or polypeptides, such as by expression of recombinant fusion proteins comprising heterologous polypeptides fused to the N-terminus or C-terminus of an anti-activin A antibody polypeptide. For example, the conjugated peptide may be a heterologous signal (or leader) polypeptide, e.g., the yeast alpha-factor leader, or a peptide 10 such as an epitope tag. Antigen binding protein-containing fusion proteins can comprise peptides added to facilitate purification or identification of antigen binding protein (e.g., poly-His). An antigen binding protein also can be linked to the FLAG peptide Asp-Tyr-Lys Asp-Asp-Asp-Asp-Lys (DYKDDDDK) (SEQ ID NO:226) as described in Hopp et al., Bio/Technology 6:1204, 1988, and U.S. Patent 5,011,912. The FLAG peptide is highly 15 antigenic and provides an epitope reversibly bound by a specific monoclonal antibody (mAb), enabling rapid assay and facile purification of expressed recombinant protein. Reagents useful for preparing fusion proteins in which the FLAG peptide is fused to a given polypeptide are commercially available (Sigma, St. Louis, MO). Oligomers that contain one or more antigen binding proteins may be employed 20 as activin A antagonists. Oligomers may be in the form of covalently-linked or non covalently-linked dimers, trimers, or higher oligomers. Oligomers comprising two or more antigen binding protein are contemplated for use, with one example being a homodimer. Other oligomers include heterodimers, homotrimers, heterotrimers, homotetramers, heterotetramers, etc. 25 One embodiment is directed to oligomers comprising multiple antigen binding proteins joined via covalent or non-covalent interactions between peptide moieties fused to the antigen binding proteins. Such peptides may be peptide linkers (spacers), or peptides that have the property of promoting oligomerization. Leucine zippers and certain polypeptides derived from antibodies are among the peptides that can promote oligomerization of antigen 30 binding proteins attached thereto, as described in more detail below. In particular embodiments, the oligomers comprise from two to four antigen binding proteins. The antigen binding proteins of the oligomer may be in any form, such as any of the forms described above, e.g., variants or fragments. Preferably, the oligoners comprise antigen binding proteins that have activin A binding activity. SEA 2079156v l0081428-000011 47 WO 2008/031061 PCT/US2007/077923 In one embodiment, an oligomer is prepared using polypeptides derived from immunoglobulins. Preparation of fusion proteins comprising certain heterologous polypeptides fused to various portions of antibody-derived polypeptides (including the Fc domain) has been described, e.g., by Ashkenazi et al., 1991, PNAS USA 88:10535; Byrn et 5 al., 1990, Nature 344:677; and Hollenbaugh et al., 1992 Curr. Prot.s in Immunol., Suppl. 4, pages 10.19.1 - 10.19.11. One embodiment of the present invention is directed to a dimer comprising two fusion proteins created by fusing an activin A binding fragment of an anti-activin A antibody to the Fc region of an antibody. The dimer can be made by, for example, inserting a 10 gene fusion encoding the fusion protein into an appropriate expression vector, expressing the gene fusion in host cells transformed with the recombinant expression vector, and allowing the expressed fusion protein to assemble much like antibody molecules, whereupon interchain disulfide bonds form between the Fc moieties to yield the dimer. The term "Fc polypeptide" as used herein includes native and mutein forms of 15 polypeptides derived from the Fc region of an antibody. Truncated forms of such polypeptides containing the hinge region that promotes dimerization also are included. Fusion proteins comprising Fc moieties (and oligomers formed therefrom) offer the advantage of facile purification by affinity chromatography over Protein A or Protein G columns. 20 One suitable Fc polypeptide, described in PCT application WO 93/10151 (hereby incorporated by reference), is a single chain polypeptide extending from the N terminal hinge region to the native C-terminus of the Fc region of a human IgG 1 antibody. Another useful Fc polypeptide is the Fc mutein described in U.S. Patent 5,457,035 and in Baum et al., 1994, EMBO J. 13:3992-4001. The amino acid sequence of this mutein is 25 identical to that of the native Fc sequence presented in WO 93/10151, except that amino acid 19 has been changed from Leu to Ala, amino acid 20 has been changed from Leu to Glu, and amino acid 22 has been changed from Gly to Ala. The mutein exhibits reduced affinity for Fc receptors. In other embodiments, the variable portion of the heavy and/or light chains of 30 an anti-activin A antibody may be substituted for the variable portion of an antibody heavy and/or light chain. Alternatively, the oligomer is a fusion protein comprising multiple antigen binding proteins, with or without peptide linkers (spacer peptides). Among the suitable peptide linkers are those described in U.S. Patents 4,751,180 and 4,935,233. SEA 2079156vl 0081428-000011 48 WO 2008/031061 PCT/US2007/077923 Another method for preparing oligomeric antigen binding proteins involves use of a leucine zipper. Leucine zipper domains are peptides that promote oligomerization of the proteins in which they are found. Leucine zippers were originally identified in several DNA-binding proteins (Landschulz et al., 1988, Science 240:1759), and have since been 5 found in a variety of different proteins. Among the known leucine zippers are naturally occurring peptides and derivatives thereof that dimerize or trimerize. Examples of leucine zipper domains suitable for producing soluble oligomeric proteins are described in PCT application WO 94/10308, and the leucine zipper derived from lung surfactant protein D (SPD) described in Hoppe et al., 1994, FEBS Letters 344:191, hereby incorporated by 10 reference. The use of a modified leucine zipper that allows for stable trimerization of a heterologous protein fused thereto is described in Fanslow et al., 1994, Senin. Immunol. 6:267-78. In one approach, recombinant fusion proteins comprising an anti-activin A antibody fragment or derivative fused to a leucine zipper peptide are expressed in suitable host cells, and the soluble oligomeric anti-activin A antibody fragments or derivatives that 15 form are recovered from the culture supernatant. In one aspect, the present invention provides antigen binding proteins that interfere with the binding of activin A to an activin A receptor. Such antigen binding proteins can be made against activin A, or a fragment, variant or derivative thereof, and screened in conventional assays for the ability to interfere with binding of activin A to activin 20 A receptor. Examples of suitable assays are assays that test the antigen binding proteins for the ability to inhibit binding of activin A to cells expressing activin A receptor, or that test antigen binding proteins for the ability to reduce a biological or cellular response that results from the binding of activin A to cell surface activin A receptors. For example, as set forth in Figure 10, as well as the Examples below, antibodies can be screened according to their 25 ability to bind to immobilized antibody surfaces (activin A and/or activin B). Antigen-binding fragments of antigen binding proteins of the invention may be produced by conventional techniques. Examples of such fragments include, but are not limited to, Fab and F(ab')2 fragments. Antibody fragments and derivatives produced by genetic engineering techniques also are contemplated. 30 Additional embodiments include chimeric antibodies, e.g., humanized versions of non-human (e.g., murine) monoclonal antibodies. Such humanized antibodies may be prepared by known techniques, and offer the advantage of reduced immunogenicity when the antibodies are administered to humans. In one embodiment, a humanized SEA 2079156vl 0081428-000011 49 WO 2008/031061 PCT/US2007/077923 monoclonal antibody comprises the variable domain of a nmurine antibody (or all or part of the antigen binding site thereof) and a constant domain derived from a human antibody. Alternatively, a humanized antibody fragment may comprise the antigen binding site of a murine monoclonal antibody and a variable domain fragment (lacking the antigen-binding 5 site) derived from a human antibody. Procedures for the production of chimeric and further engineered monoclonal antibodies include those described in Riechmann et al., 1988, Nature 332:323, Liu et al., 1987, Proc. Nat. Acad. Sci. USA 84:3439, Larrick et al., 1989, Bio/Technology 7:934, and Winter et al., 1993, TIPS 14:139. In one embodiment, the chimeric antibody is a CDR grafted antibody. Techniques for humanizing antibodies are 10 discussed in, e.g., U.S. Pat. No.s 5,869,619, 5,225,539, 5,821,337, 5,859,205, 6,881,557, Padlan et al., 1995, FASEB J. 9:133-39, and Tamura et al., 2000, J. Immunol. 164:1432-41. Procedures have been developed for generating human or partially human antibodies in non-human animals. For example, mice in which one or more endogenous immunoglobulin genes have been inactivated by various means have been prepared. Human 15 immunoglobulin genes have been introduced into the mice to replace the inactivated mouse genes. Antibodies produced in the animal incorporate human immunoglobulin polypeptide chains encoded by the human genetic material introduced into the animal. In one embodiment, a non-human animal, such as a transgenic mouse, is immunized with an activin A polypeptide, such that antibodies directed against the activin A polypeptide are generated 20 in the animal. One example of a suitable immunogen is a soluble human activin A, such as a polypeptide comprising the extracellular domain of the protein of SEQ ID NO:225, or other immunogenic fragment of the protein of SEQ ID NO:225. Examples of techniques for production and use of transgenic animals for the production of human or partially human 25 antibodies are described in U.S. Patents 5,814,318, 5,569,825, and 5,545,806, Davis et al., 2003, Production of human antibodies from transgenic mice in Lo, ed, Antibody Engineering: Methods and Protocols, Humana Press, NJ:191-200, Kellermann et al., 2002, Curr Opin Biotechnol. 13:593-97, Russel et al., 2000, Infect Immun. 68:1820-26, Gallo et al., 2000, Eur J Immun. 30:534-40, Davis et al., 1999, Cancer Metastasis Rev. 18:421-25, Grccn, 1999, J 30 Immunol Methods. 231:11-23, Jakobovits, 1998, Advanced Drug Delivery Reviews 31:33-42, Green et al., 1998, J Exp Med. 188:483-95, Jakobovits A, 1998, Exp. Opin. Invest. Drugs. 7:607-14, Tsuda et al., 1997, Genomics. 42:413-21, Mendez et al., 1997, Nat Genet. 15:146 56, Jakobovits, 1994, Curr Biol. 4:761-63, Arbones et al., 1994, Immunity. 1:247-60, Green et al., 1994, Nat Genet. 7:13-21, Jakobovits et al., 1993, Nature. 362:255-58, Jakobovits et SEA 2079156vl 0081428-000011 50 WO 2008/031061 PCT/US2007/077923 al., 1993, Proc Natl Acad Sci U S A. 90:2551-55. Chen, J., M. Trounstine, F. W. Alt, F. Young, C. Kurahara, J. Loring, D. Huszar. Inter'l Immunol. 5 (1993): 647-656, Choi et al., 1993, Nature Genetics 4: 117-23, Fishwild et al., 1996, Nature Biotech. 14: 845-51, Harding et al., 1995, Annals of the New York Academy of Sciences, Lonberg et al., 1994, Nature 368: 5 856-59, Lonberg, 1994, Transgenic Approaches to Human Monoclonal Antibodies in Handbook of Experimental Pharmacology 113: 49-101, Lonberg et al., 1995, Internal Review of Immunology 13: 65-93, Neuberger, 1996, Nature Biotechnology 14: 826, Taylor et al., 1992, Nucleic Acids Res. 20: 6287-95, Taylor et al., 1994, Inter'l Immunol. 6: 579-91, Tomizuka et al., 1997, Nature Genetics 16: 133-43, Tomizuka et al., 2000, Pro. Nat'lAcad. 10 Sci. USA 97: 722-27, Tuaillon et al., 1993, Pro.Nat'lAcad.Sci. USA 90: 3720-24, and Tuaillon et al., 1994, J.Inmunol. 152: 2912-20. In another aspect, the present invention provides monoclonal antibodies that bind to activin A. Monoclonal antibodies may be produced using any technique known in the art, e.g., by immortalizing spleen cells harvested from the transgenic animal after completion 15 of the immunization schedule. The spleen cells can be immortalized using any technique known in the art, e.g., by fusing them with myeloma cells to produce hybridomas. Myeloma cells for use in hybridoma-producing fusion procedures preferably are non-antibody producing, have high fusion efficiency, and enzyme deficiencies that render them incapable of growing in certain selective media which support the growth of only the desired fused cells 20 (hybridomas). Examples of suitable cell lines for use in mouse fusions include Sp-20, P3 X63/Ag8, P3-X63-Ag8.653, NSI/1.Ag 4 1, Sp2lO-Agl4, FO, NSO/U, MPC-11, MPCII X45-GTG 1.7 and S194/5XXO Bul; examples of cell lines used in rat fusions include R210.RCY3, Y3-Ag 1.2.3, IR983F and 4B210. Other cell lines useful for cell fusions are U 266, GM1 500-GRG2, LICR-LON-HMy2 and UC729-6. 25 In one embodiment, a hybridoma cell line is produced by immunizing an animal (e.g., a transgenic animal having human immunoglobulin sequences) with an activin A immunogen; harvesting spleen cells from the immunized animal; fusing the harvested spleen cells to a myeloma cell line, thereby generating hybridoma cells; establishing hybridoma cell lines from the hybridoma cells, and identifying a hybridoma cell line that 30 produces an antibody that binds an activin A polypeptide. Such hybridoma cell lines, and anti-activin A monoclonal antibodies produced by them, are encompassed by the present invention. Monoclonal antibodies secreted by a hybridoma cell line can be purified using any technique known in the art. Hybridomas or mAbs may be further screened to identify SEA 2079156v1 0081428-000011 51 WO 2008/031061 PCT/US2007/077923 nAbs with particular properties, such as the ability to block an activin A-induced activity. Examples of such screens are provided in the examples below. Molecular evolution of the complementarity determining regions (CDRs) in the center of the antibody binding site also has been used to isolate antibodies with increased 5 affinity, for example, antibodies having increased affinity for c-erbB-2, as described by Schier et al., 1996, J. Mol. Biol. 263:551. Accordingly, such techniques are useful in preparing antibodies to activin A. Antigen binding proteins directed against an activin A can be used, for example, in assays to detect the presence of activin A polypeptides, either in vitro or in vivo, 10 The antigen binding proteins also may be employed in purifying activin A proteins by irmnunoaffinity chromatography. Those antigen binding proteins that additionally can block binding of activin A may be used to inhibit a biological activity that results from such binding. Blocking antigen binding proteins can be used in the methods of the present invention. Such antigen binding proteins that function as activin A antagonists may be 15 employed in treating any activin A-related condition, including but not limited to cachexia. In one embodiment, a human anti-activin A monoclonal antibody generated by procedures involving immunization of transgenic mice is employed in treating such conditions. Although human, partially human, or humanized antibodies will be suitable for many applications, particularly those involving administration of the antibody to a human 20 subject, other types of antigen binding proteins will be suitable for certain applications. The non-human antibodies of the invention can be, for example, derived from any antibody producing animal, such as mouse, rat, rabbit, goat, donkey, or non-human primate (such as monkey (e.g., cynomologous or rhesus monkey) or ape (e.g., chimpanzee)). Non-human antibodies of the invention can be used, for example, in in vitro and cell-culture based 25 applications, or any other application where an immune response to the antibody of the invention does not occur, is insignificant, can be prevented, is not a concern, or is desired. In one embodiment, a non-human antibody of the invention is administered to a non-human subject. In another embodiment, the non-human antibody does not elicit an immune response in the non-human subject. In another embodiment, the non-human antibody is from the same 30 species as the non-human subject, e.g., a mouse antibody of the invention is administered to a mouse. An antibody from a particular species can be made by, for example, jimmunizing an animal of that species with the desired immunogen (e.g., a soluble activin A polypeptide) or using an artificial system for generating antibodies of that species (e.g., a bacterial or phage display-based system for generating antibodies of a particular species), or by converting an SEA 2079156v1 0081428-000011 52 WO 2008/031061 PCT/US2007/077923 antibody from one species into an antibody from another species by replacing, e.g., the constant region of the antibody with a constant region from the other species, or by replacing one or more amino acid residues of the antibody so that it more closely resembles the sequence of an antibody from the other species. In one embodiment, the antibody is a 5 chimeric antibody comprising amino acid sequences derived from antibodies from two or more different species. Antigen binding proteins may be prepared by any of a number of conventional techniques. For example, they may be purified from cells that naturally express them (e.g., an antibody can be purified from a hybridoma that produces it), or produced in recombinant 10 expression systems, using any technique known in the art. See, for example, Monoclonal Antibodies, Hybridomas: A New Dimension in Biological Analyses, Kennet et al. (eds.), Plenum Press, New York (1980); and Antibodies: A Laboratory Manual, Harlow and Land (eds.), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, (1988). Any expression system known in the art can be used to make the recombinant 15 polypeptides of the invention. In general, host cells are transformed with a recombinant expression vector that comprises DNA encoding a desired polypeptide. Among the host cells that may be employed are prokaryotes, yeast or higher eukaryotic cells. Prokaryotes include gram negative or gram positive organisms, for example E. coli or Bacilli. Higher eukaryotic cells include insect cells and established cell lines of mammalian origin. Examples of 20 suitable mammalian host cell lines include the COS-7 line of monkey kidney cells (ATCC CRL 1651) (Gluzman et al., 1981, Cell 23:175), L cells, 293 cells, C127 cells, 3T3 cells (ATCC CCL 163), Chinese hamster ovary (CHO) cells, HeLa cells, BHK (ATCC CRL 10) cell lines, and the CVI/EBNA cell line derived from the African green monkey kidney cell line CVI (ATCC CCL 70) as described by McMahan et al., 1991, EMBO J. 10: 2821. 25 Appropriate cloning and expression vectors for use with bacterial, fungal, yeast, and mammalian cellular hosts are described by Pouwels et al. (Cloning Vectors: A Laboratory Manual, Elsevier, New York, 1985). The transformed cells can be cultured under conditions that promote expression of the polypeptide, and the polypeptide recovered by conventional protein 30 purification procedures. One such purification procedure includes the use of affinity chromatography, e.g., over a matrix having all or a portion (e.g., the extracellular domain) of activin A bound thereto. Polypeptides contemplated for use herein include substantially homogeneous recombinant mammalian anti-activin A antibody polypeptides substantially free of contaminating endogenous materials. SEA 2079156vl 0081428-000011 53 WO 2008/031061 PCT/US2007/077923 Antigen binding proteins may be prepared, and screened for desired properties, by any of a number of known techniques. Certain of the techniques involve isolating a nucleic acid encoding a polypeptide chain (or portion thereof) of an antigen binding protein of interest (e.g., an anti-activin A antibody), and manipulating the nucleic 5 acid through recombinant DNA technology. The nucleic acid may be fused to another nucleic acid of interest, or altered (e.g., by mutagenesis or other conventional techniques) to add, delete, or substitute one or more amino acid residues, for example. In one aspect, the present invention provides antigen-binding fragments of an anti-activin A antibody of the invention. Such fragments can consist entirely of antibody 10 derived sequences or can comprise additional sequences. Examples of antigen-binding fragments include Fab, F(ab')2, single chain antibodies, diabodics, triabodics, tetrabodies, and domain antibodies. Other examples are provided in Lunde et al., 2002, Biochem. Soc. Trans. 30:500-06. Single chain antibodies may be formed by linking heavy and light chain 15 variable domain (Fv region) fragments via an amino acid bridge (short peptide linker), resulting in a single polypeptide chain. Such single-chain Fvs (scFvs) have been prepared by fusing DNA encoding a peptide linker between DNAs encoding the two variable domain polypeptides (VL and VH). The resulting polypeptides can fold back on themselves to form antigen-binding monomers, or they can form multimers (e.g., diners, trimers, or tetramers), 20 depending on the length of a flexible linked between the two variable domains (Kortt et al., 1997, Prot. Eng. 10:423; Kortt et al., 2001, Biomol. Eng. 18:95-108). By combining different VL and VH-comprising polypeptides, one can form multimeric scFvs that bind to different epitopes (Kriangkum et al., 2001, Biornol. Eng. 18:31-40). Techniques developed for the production of single chain antibodies include those described in U.S. Patent No. 25 4,946,778; Bird, 1988, Science 242:423; Huston et al., 1988, Proc. Nall. Acad. Sci. USA 85:5879; Ward et al., 1989, Nature 334:544, de Graaf et al., 2002, Methods Mol Biol. 178:379-87. Single chain antibodies derived from antibodies provided herein include, but are not limited to, scFvs comprising the variable domain combinations LlH1, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, L10H10, L11Hll, L12H12, L13H13, and L14H14 30 are encompassed by the present invention. Antigen binding proteins (e.g., antibodies, antibody fragments, and antibody derivatives) of the invention can comprise any constant region known in the art. The light chain constant region can be, for example, a kappa- or lambda-type light chain constant region, e.g., a human kappa- or lambda-type light chain constant region. The heavy chain SEA 2079156v1 0081428-000011 54 WO 2008/031061 PCT/US2007/077923 constant region can be, for example, an alpha-, delta-, epsilon-, gamma-, or mu-type heavy chain constant regions, e.g., a human alpha-, delta-, epsilon-, gamma-, or mu-type heavy chain constant region. In one embodiment, the light or heavy chain constant region is a fragment, derivative, variant, or mutein of a naturally occurring constant region. 5 Techniques are known for deriving an antibody of a different subclass or isotype from an antibody of interest, i.e., subclass switching. Thus, IgG antibodies may be derived from an IgM antibody, for example, and vice versa. Such techniques allow the preparation of new antibodies that possess the antigen-binding'properties of a given antibody (the parent antibody), but also exhibit biological properties associated with an antibody 10 isotype or subclass different from that of the parent antibody. Recombinant DNA techniques may be employed. Cloned DNA encoding particular antibody polypeptides may be employed in such procedures, e.g., DNA encoding the constant domain of an antibody of the desired isotype. See also Lantto et al., 2002, Methods Mol. Biol. 178:303-16. In one embodiment, an antigen binding protein of the invention comprises the 15 IgGI heavy chain domain of any of Al-A14 (H1-H14) or a fragment of the IgG1 heavy chain domain of any of Al-A14 (H1-H14). In another embodiment, an antigen binding protein of the invention comprises the kappa light chain constant chain region of Al-A14 (Li-L14), or a fragment of the kappa light chain constant region of Al-A14 (L1-L14). In another embodiment, an antigen binding protein of the invention comprises both the IgGI heavy 20 chain domain, or a fragment thereof, of A1-A14 (Li-LI4) and the kappa light chain domain, or a fragment thereof, of Al-A14 (L1-L14). Accordingly, the antigen binding proteins of the present invention include those comprising, for example, the variable domain combinations LIHI, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, LIOH1O, L11HI1, L12H12, L13-113, and L14H14, 25 having a desired isotype (for example, IgA, IgGI, IgG2, IgG3, IgG4, 1gM, IgE, and IgD) as well as Fab or F(ab') 2 fragments thereof. Moreover, if an IgG4 is desired, it may also be desired to introduce a point mutation (CPSCP -> CPPCP) in the hinge region as described in Bloom et al., 1997, Protein Science 6:407, incorporated by reference herein) to alleviate a tendency to form intra-H chain disulfide bonds that can lead to heterogeneity in the IgG4 30 antibodies. In one embodiment, the antigen binding protein has a Koff of 1x10- 4 s-1 or lower. In another embodiment, the Koff is 5x10- 5 s- 1 or lower. In another embodiment, the Koff is substantially the same as an antibody having a combination of light chain and heavy chain variable domain sequences selected from the group of combinations consisting of SEA 2079156vl 0081428-000011 55 WO 2008/031061 PCT/US2007/077923 LIH1, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, L10H10, L11H11, L12H12, L13H13, and L14H14. In another embodiment, the antigen binding protein binds to activin A with substantially the same Ko as an antibody that comprises one or more CDRs from an antibody having a combination of light chain and heavy chain variable domain sequences 5 selected from the group of combinations consisting of LlH1, L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, 10H10, L1111, L12H12, L13H13, and L14H14. In another embodiment, the antigen binding protein binds to activin A with substantially the same Kff as an antibody that comprises one of the amino acid sequences illustrated above. In another embodiment, the antigen binding protein binds to activin A with substantially the same Kort 10 as an antibody that comprises one or more CDRs from an antibody that comprises one of the amino acid sequences illustrated above. As used herein, the term human activin A is intended to include the protein of SEQ ID NO: 1 and allelic variants thereof. Activin A can be purified from host cells that have been transfected by a gene encoding activin A by elution of filtered supernatant of host cell 15 culture fluid using a Heparin HP column, using a salt gradient. The term "antibody" refers to an intact antibody, or a binding fragment thereof. An antibody may comprise a complete antibody molecule (including polyclonal, monoclonal, chimeric, humanized, or human versions having full length heavy and/or light chains), or comprise an antigen binding fragment thereof. Antibody fragments include 20 F(ab') 2 , Fab, Fab', Fv, Fe, and Fd fragments, and can be incorporated into single domain antibodies, single-chain antibodies, maxibodies, minibodies, intrabodies, diabodies, triabodies, tetrabodies, v-NAR and bis-scFv (See e.g.,, Hollinger and Hudson, 2005, Nature Biotech., 23, 9, 1126-1136). Antibody polypeptides are also disclosed in U. S. Patent No. 6,703,199, including fibronectin polypeptide monobodies. Other antibody polypeptides are 25 disclosed in U.S. Patent Publication 2005/0238646, which are single-chain polypeptides. Antigen binding fragments derived from an antibody can be obtained, for example, by proteolytic hydrolysis of the antibody, for example, pepsin or papain digestion of whole antibodies according to conventional methods. By way of example, antibody fragments can be produced by enzymatic cleavage of antibodies with pepsin to provide a 5S 30 fragment termed F(ab') 2 . This fragment can be further cleaved using a thiol reducing agent to produce 3.5S Fab' monovalent fragments. Optionally, the cleavage reaction can be performed using a blocking group for the sulfhydiyl groups that result from cleavage of disulfide linkages. As an alternative, an enzymatic cleavage using papain produces two monovalent Fab fragments and an Fc fragment directly. These methods are described, for SEA 2079156vl 0081428-000011 56 WO 2008/031061 PCT/US2007/077923 example, by Goldenberg, U.S. Patent No. 4,331,647, Nisonoff et al., Arch. Biochem. Biophys. 89:230, 1960; Porter, Biochem. J. 73:119, 1959; Edelman et al., in Methods in Enzymology 1:422 (Academic Press 1967); and by Andrews, S.M. and Titus, J.A. in Current Protocols in Immunology (Coligan JE., et al., eds), John Wiley & Sons, New York (2003), pages 5 2.8.1-2.8.10 and 2.10A.1-2.10A.5. Other methods for cleaving antibodies, such as separating heavy chains to form monovalent light-heavy chain fragments (Fd), further cleaving of fragments, or other enzymatic, chemical, or genetic techniques may also be used, so long as the fragments bind to the antigen that is recognized by the intact antibody. An antibody fragment may also be any synthetic or genetically engineered 10 protein. For example, antibody fragments include isolated fragments consisting of the light chain variable region, "Fv" fragments consisting of the variable regions of the heavy and light chains, recombinant single chain polypeptide molecules in which light and heavy variable regions are connected by a peptide linker (scFv proteins). Another form of an antibody fragment is a peptide comprising one or more 15 complementarity determining regions (CDRs) of an antibody. CDRs (also termed "minimal recognition units", or "hypervariable region") can be obtained by constructing polynucleotides that encode the CDR of interest. Such polynucleotides are prepared, for example, by using the polymerase chain reaction to synthesize the variable region using mRNA of antibody-producing cells as a template (see, for example, Larrick et al., Methods: 20 A Companion to Methods in Enzymology 2:106, 1991; Courtenay-Luck, "Genetic Manipulation of Monoclonal Antibodies," in Monoclonal Antibodies: Production, Engineering and Clinical Application, Ritter e t al. (eds.), page 166 (Cambridge University Press 1995); and Ward et al., "Genetic Manipulation and Expression of Antibodies," in Monoclonal Antibodies: Principles and Applications, Birch et al., (eds.), page 137 25 (Wiley-Liss, Inc. 1995)). Thus, in one embodiment, the binding agent comprises at least one CDR as described herein. The binding agent may comprise at least two, three, four, five or six CDR's as described herein. The binding agent further may comprise at least one variable region domain of an antibody described herein. The variable region domain may be. of any size or 30 amino acid composition and will generally comprise at least one CDR sequence responsible for binding to human activin A, for example CDR-H1, CDR-H2, CDR-H3 and/or the light chain CDRs specifically described herein and which is adjacent to or in frame with one or more framework sequences. In general terms, the variable (V) region domain may be any suitable arrangement of immunoglobulin heavy (VH) and/or light (VL) chain variable SEA 2079156vl 0081428-000011 57 WO 2008/031061 PCT/US2007/077923 domains. Thus, for example, the V region domain may be monomeric and be a VH or VL domain, which is capable of independently binding human activin A with an affinity at least equal to 1 x 10'M or less as described below. Alternatively, the V region domain may be dimeric and contain VH-VH, VH-VL, or VL-VL, dimers. The V region dimer comprises at least 5 one VH and at least one VL chain that may be non-covalently associated (hereinafter referred to as Fv). If desired, the chains may be covalently coupled either directly, for example via a disulfide bond between the two variable domains, or through a linker, for example a peptide linker, to form a single chain Fv (scFv). The variable region domain may be any naturally occurring variable domain 10 or an engineered version thereof. By engineered version is meant a variable region domain that has been created using recombinant DNA engineering techniques. Such engineered versions include those created, for example, from a specific antibody variable region by insertions, deletions, or changes in or to the amino acid sequences of the specific antibody. Particular examples include engineered variable region domains containing at least one CDR 15 and optionally one or more framework amino acids from a first antibody and the remainder of the variable region domain from a second antibody. The variable region domain may be covalently attached at a C-terminal amino acid to at least one other antibody domain or a fragment thereof. Thus, for example, a VH domain that is present in the variable region domain may be linked to an immunoglobulin 20 CHI domain, or a fragment thereof. Similarly a VL domain may be linked to a CK domain or a fragment thereof. In this way, for example, the antibody may be a Fab fragment wherein the antigen binding domain contains associated VH and VL domains covalently linked at their C-terinini to a CHI and CK domain, respectively. The CHI domain may be extended with further amino acids, for example to provide a hinge region or a portion of a hinge region 25 domain as found in a Fab' fragment,-or to provide further domains, such as antibody CH2 and CH3 domains. As described herein, antibodies comprise at least one of these CDRs. For example, one or more CDR may be incorporated into known antibody framework regions (IgG1, IgG2, ctc.), or conjugated to a suitable vehicle to enhance the half-life thereof. 30 Suitable vehicles include, but are not limited to Fc, polyethylene glycol (PEG), albumin, transferrin, and the like. These and other suitable vehicles are known in the art. Such conjugated CDR peptides may be in monomeric, dimeric, tetrameric, or other form. In one embodiment, one or more water-soluble polymer is bonded at one or more specific position, for example at the amino terminus, of a binding agent. SEA 2079156v1 0081428-000011 58 WO 2008/031061 PCT/US2007/077923 In certain preferred embodiments, an antibody comprises one or more water soluble polymer attachments, including, but not limited to, polyethylene glycol, polyoxyethylene glycol, or polypropylene glycol. See, e.g., U.S. Pat. Nos. 4,640,835, 4,496,689, 4,301,144, 4,670,417, 4,791,192 and 4,179,337. In certain embodiments, a 5 derivative binding agent comprises one or more of monomethoxy-polyethylene glycol, dextran, cellulose, or other carbohydrate based polymers, poly-(N-vinyl pyrrolidone) polyethylene glycol, propylene glycol homopolymers, a polypropylene oxide/ethylene oxide co-polymer, polyoxyethylated polyols (e.g., glycerol) and polyvinyl alcohol, as well as mixtures of such polymers. In certain embodiments, one or more water-soluble polymer is 10 randomly attached to one or more side chains. In certain embodiments, PEG can act to improve the therapeutic capacity for a binding agent, such as an antibody. Certain such methods are discussed, for example, in U.S. Pat. No. 6,133,426, which is hereby incorporated by reference for any purpose. It will be appreciated that an antibody of the present invention may have at 15 least one amino acid substitution, providing that the antibody retains binding specificity. Therefore, modifications to the antibody structures are encompassed within the scope of the invention. These may include amino acid substitutions, which may be conservative or non conservative, that do not destroy the activin A binding capability of an antibody. Conservative amino acid substitutions may encompass non-naturally occun-ing amino acid 20 residues, which are typically incorporated by chemical peptide synthesis rather than by synthesis in biological systems. These include peptidomimetics and other reversed or inverted forms of amino acid moieties, A conservative amino acid substitution may also involve a substitution of a native amino acid residue with a normative residue such that there is little or no effect on the polarity or charge of the amino acid residue at that position. 25 Non-conservative substitutions may involve the exchange of a member of one class of amino acids or amino acid mimetics for a member from another class with different physical properties (e.g. size, polarity, hydrophobicity, charge). Such substituted residues may be introduced into regions of the human antibody that are homologous with non-human antibodies, or into the non-homologous regions of the molecule. 30 Moreover, one skilled in the art may generate test variants containing a single amino acid substitution at each desired amino acid residue. The variants can then be screened using activity assays known to those skilled in the art. Such variants could be used to gather information about suitable variants. For example, if one discovered that a change to a particular amino acid residue resulted in destroyed, undesirably reduced, or unsuitable SEA 2079156v1 0081428-000011 59 WO 2008/031061 PCT/US2007/077923 activity, variants with such a change may be avoided. In other words, based on information gathered from such routine experiments, one skilled in the art can readily determine the amino acids where further substitutions should be avoided either alone or in combination with other mutations. 5 A skilled artisan will be able to determine suitable variants of the polypeptide as set forth herein using well-known techniques. In certain embodiments, one skilled in the art may identify suitable areas of the molecule that may be changed without destroying activity by targeting regions not believed to be important for activity. In certain embodiments, one can identify residues and portions of the molecules that are conserved 10 among similar polypeptides. In certain embodiments, even areas that may be important for biological activity or for structure may be subject to conservative amino acid substitutions without destroying the biological activity or without adversely affecting the polypeptide structure. Additionally, one skilled in the art can review structure-function studies 15 identifying residues in similar polypeptides that are important for activity or structure. In view of such a comparison, one can predict the importance of amino acid residues in a protein that correspond to amino acid residues which are important for activity or structure in similar proteins. One skilled in the art may opt for chemically similar amino acid substitutions for such predicted important amino acid residues. 20 One skilled in the art can also analyze the three-dimensional structure and amino acid sequence in relation to that structure in similar polypeptides. In view of such information, one skilled in the art may predict the alignment of amino acid residues of an antibody with respect to its three dimensional structure. In certain embodiments, one skilled in the art may choose not to make radical changes to amino acid residues predicted to be on 25 the surface of the protein, since such residues may be involved in important interactions with other molecules. A number of scientific publications have been devoted to the prediction of secondary structure. See Moult J., Curr. Op. in Biotech., 7(4):422-427 (1996), Chou et al., Biochen., 13(2):222-245 (1974); Chou et al., Biochem., 113(2):211-222 (1974); Chou et al., 30 Adv. Enzymol. Relat. Areas Mol. Biol., 47:45-148 (1978); Chou et al., Ann. Rev. Biochem., 47:251-276 and Chou et al., Biophys. J., 26:367-384 (1979). Moreover, computer programs are currently available to assist with predicting secondary structure. One method of predicting secondary structure is based upon homology modeling. For example, two polypeptides or proteins which have a sequence identity of greater than 30%, or similarity greater than 40% SEA 2079156v1 0081428-000011 60 WO 2008/031061 PCT/US2007/077923 often have similar structural topologies. The recent growth of the protein structural database (PDB) has provided enhanced predictability of secondary structure, including the potential number of folds within a polypeptide's or protein's structure. See Holm et al., Nucl. Acid. Res., 27(l):244-247 (1999). It has been suggested (Brenner et al., Curr. Op. Struct. Biol., 5 7(3):369-376 (1997)) that there are a limited number of folds in a given polypeptide or protein and that once a critical number of structures have been resolved, structural prediction will become dramatically more accurate. Additional methods of predicting secondary structure include "threading" (Jones, D., Curr. Opin. Struct. Biol., 7(3):377-87 (1997); Sippl et al., Structure, 4(l):15-19 10 (1996)), "profile analysis" (Bowie et al., Science, 253:164-170 (1991); Gribskov et al., Meth. Enzym., 183:146-159 (1990); Gribskov et al., Proc. Nat. Acad. Sci., 84(13):4355-4358 (1987)), and "evolutionary linkage" (See Holm, supra (1999), and Brenner, supra (1997)). In certain embodiments, variants of antibodies include glycosylation variants wherein the number and/or type of glycosylation site has been altered compared to the amino 15 acid sequences of a parent polypeptide. In certain embodiments, variants comprise a greater or a lesser number of N-linked glycosylation sites than the native protein. An N-linked glycosylation site is characterized by the sequence: Asn-X-Ser or Asn-X-Thr, wherein the amino acid residue designated as X may be any amino acid residue except proline. The substitution of amino acid residues to create this sequence provides a potential new site for 20 the addition of an N-linked carbohydrate chain. Alternatively, substitutions which eliminate this sequence will remove an existing N-linked carbohydrate chain. Also provided is a rearrangement of N-linked carbohydrate chains wherein one or more N-linked glycosylation sites (typically those that are naturally occurring) are eliminated and one or more new N linked sites are created. Additional preferred antibody variants include cysteine variants 25 wherein one or more cysteine residues are deleted from or substituted for another amino acid (e.g., serine) as compared to the parent amino acid sequence. Cysteine variants may be useful when antibodies must be refolded into a biologically active conformation such as after the isolation of insoluble inclusion bodies. Cysteine variants generally have fewer cysteine residues than the native protein, and typically have an even number to minimize interactions 30 resulting from unpaired cysteines. Desired amino acid substitutions (whether conservative or non-conservative) can be determined by those skilled in the art at the time such substitutions are desired. In certain embodiments, amino acid substitutions can be used to identify important residues of SEA 2079156vl 0081428-000011 61 WO 2008/031061 PCT/US2007/077923 antibodies to activin A, or to increase or decrease the affinity of the antibodies to activin A described herein. According to certain embodiments, preferred amino acid substitutions are those which: (1) reduce susceptibility to proteolysis, (2) reduce susceptibility to oxidation, (3) 5 alter binding affinity for forcing protein complexes, (4) alter binding affinities, and/or (4) confer or modify other physiochemical or functional properties on such polypeptides. According to certain embodiments, single or multiple amino acid substitutions (in certain embodiments, conservative amino acid substitutions) may be made in the naturally-occurring sequence (in certain embodiments, in the portion of the polypeptide outside the domain(s) 10 forming intermolecular contacts). In certain embodiments, a conservative amino acid substitution typically may not substantially change the structural characteristics of the parent sequence (e.g., a replacement amino acid should not tend to break a helix that occurs in the parent sequence, or disrupt other types of secondary structure that characterizes the parent sequence). Examples of art-recognized polypeptide secondary and tertiary structures are 15 described in Proteins, Structures and Molecular Principles (Creighton, Ed., W. H. Freeman and Company, New York (1984)); Introduction to Protein Structure (C. Branden and J. Tooze, eds., Garland Publishing, New York, N.Y. (1991)); and Thornton et al. Nature 354:105 (1991), which are each incorporated herein by reference. In certain embodiments, antibodies of the invention may be chemically 20 bonded with polymers, lipids, or other moieties. The binding agents may comprise at least one of the CDRs described herein incorporated into a biocompatible framework structure. In one example, the biocompatible framework structure comprises a polypeptide or portion thereof that is sufficient to form a conformationally stable structural support, or framework, or scaffold, which is able to display 25 one or more sequences of amino acids that bind to an antigen (e.g., CDRs, a variable region, etc.) in a localized surface region. Such structures can be a naturally occurring polypeptide or polypeptide "fold" (a structural motif), or can have one or more modifications, such as additions, deletions or substitutions of amino acids, relative to a naturally occurring polypeptide or fold. These scaffolds can be derived from a polypeptide of any species (or of 30 more than one species), such as a human, other mammal, other vertebrate, invertebrate, plant, bacteria or virus. Typically the biocompatible framework structures are based on protein scaffolds or skeletons other than immunoglobulin domains. For example, those based on fibronectin, ankyrin, lipocalin, neocarzinostain, cytochrome b, CPI zinc finger, PST1, coiled SEA2079156v 0081428-000011 62 WO 2008/031061 PCT/US2007/077923 coil, LACI-D 1, Z domain and tendamistat domains may be used (See e.g., Nygren and Uhlen, 1997, Curr. Opin. in Struct. Biol., 7, 463-469). It will be appreciated that the antibodies of the invention include the humanized antibodies described herein. Humanized antibodies such as those described 5 herein can be produced using techniques known to those skilled in the art (Zhang, W., et al., Molecular Immunology. 42(12):1445-1451, 2005; Hwang W. et al., Methods. 36(1):35-42, 2005; Dall'Acqua WF, et al., Methods 36(1):43-60, 2005; and Clark, M., Immunology Today. 21(8):397-402, 2000). Additionally, one skilled in the art will recognize that suitable binding agents 10 include portions of these antibodies, such as one or more of CDR-H1, CDR-H2, CDR-H3, CDR-L1, CDR-L2 and CDR-L3 as specifically disclosed herein. At least one of the regions of CDR-H1, CDR-H2, CDR-H3, CDR-L1, CDR-L2 and CDR-L3 may have at least one amino acid substitution, provided that the antibody retains the binding specificity of the non substituted CDR. The non-CDR portion of the antibody may be a non-protein molecule, 15 wherein the binding agent cross-blocks the binding of an antibody disclosed herein to activin A and/or neutralizes activin A. The non-CDR portion of the antibody may be a non-protein molecule in which the antibody exhibits a similar binding pattern to human activin A peptides in a competition binding assay as that exhibited by at least one of antibodies Al-A14, and/or neutralizes activin A. The non-CDR portion of the antibody may be composed of amino 20 acids, wherein the antibody is a recombinant binding protein or a synthetic peptide, and the recombinant binding protein cross-blocks the binding of an antibody disclosed herein to activin A and/or neutralizes activin A. The non-CDR portion of the antibody may be composed of amino acids, wherein the antibody is a recombinant antibody, and the recombinant antibody exhibits a similar binding pattern to human activin A peptides in the 25 human activin A peptide epitope competition binding assay (described hereinbelow) as that exhibited by at least one of the antibodies Al-A14, and/or neutralizes activin A. Where an antibody comprises one or more of CDR-H1, CDR-H2, CDR-H3, CDR-L1, CDR-L2 and CDR-L3 as described above, it may be obtained by expression from a host cell containing DNA coding for these sequences. A DNA coding for each CDR 30 sequence may be determined on the basis of the amino acid sequence of the CDR and synthesized together with any desired antibody variable region framework and constant region DNA sequences using oligonucleotide synthesis techniques, site-directed mutagenesis and polymerase chain reaction (PCR) techniques as appropriate. DNA coding for variable SEA 2079156v1 0081428-000011 63 WO 2008/031061 PCT/US2007/077923 region frameworks and constant regions is widely available to those skilled in the ait from genetic sequences databases such as GenBank@. Once synthesized, the DNA encoding an antibody of the invention or fragment thereof may be propagated and expressed according to any of a variety of well-known 5 procedures for nucleic acid excision, ligation, transformation, and transfection using any number of known expression vectors. Thus, in certain embodiments expression of an antibody fragment may be preferred in a prokaryotic host, such as Escherichia coli (see, e.g., Pluckthun et al., 1989 Methods Enzymol. 178:497-515). In certain other embodiments, expression of the antibody or a fragment thereof may be preferred in a eukaryotic host cell, 10 including yeast (e.g., Saccharomyces cerevisiae, Schizosaccharomyces pombe, and Pichia pastoris), animal cells (including mammalian cells) or plant cells. Examples of suitable animal cells include, but are not limited to, myeloma (such as a mouse NSO line), COS, CHO, or hybridoma cells. Examples of plant cells include tobacco, corn, soybean, and rice cells. 15 One or more replicable expression vectors containing DNA encoding an antibody variable and/or constant region may be prepared and used to transform an appropriate cell line, for example, a non-producing myeloma cell line, such as a mouse NSO line or a bacteria, such as E. coli, in which production of the antibody will occur. In order to obtain efficient transcription and translation, the DNA sequence in each vector should include 20 appropriate regulatory sequences, particularly a promoter and leader sequence operatively linked to the variable domain sequence. Particular methods for producing antibodies in this way are generally well-known and routinely used. For example, basic molecular biology procedures are described by Maniatis et al. (Molecular Cloning, A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory, New York, 1989; see also Maniatis et al, 3rd ed., Cold 25 Spring Harbor Laboratory, New York, (2001)). DNA sequencing can be performed as described in Sanger et al. (PNAS 74:5463, (1977)) and the Amersham International plc sequencing handbook, and site directed mutagenesis can be carried out according to methods known in the art (Kramer et al., Nucleic Acids Res. 12:9441, (1984); Kunkel Proc. Natl. Acad. Sci. USA 82:488-92 (1985); Kunkel et al., Methods in Enzymol. 154:367-82 (1987); the 30 Anglian Biotechnology Ltd. handbook). Additionally, numerous publications describe techniques suitable for the preparation of antibodies by manipulation of DNA, creation of expression vectors, and transformation and culture of appropriate cells (Mountain A and Adair, J R in Biotechnology and Genetic Engineering Reviews (ed. Tombs, M P, 10, Chapter SEA 2079156vl 0081428-000011 64 1, 1992, Intercept, Andover, UK); "Current Protocols in Molecular Biology", 1999, F.M. Ausubel (ed.), Wiley Interscience, New York). Where it is desired to improve the affinity of antibodies according to the invention containing one or more of the above-mentioned CDRs can be obtained by a number 5 of affinity maturation protocols including maintaining the CDRs (Yang et al., J. Mol. Biol., 254, 392-403, 1995), chain shuffling (Marks et al., Bio/Technology, 10, 779-783, 1992), use of mutation strains of E. coli. (Low et al., J Mol. Biol., 250, 350-368, 1996), DNA shuffling (Patten et al., Curr. Opin. Biotechnol., 8, 724-733, 1997), phage display (Thompson et al., J. Mol. Biol., 256, 7-88, 1996) and sexual PCR (Crameri, et al., Nature, 391, 288-291, 1998). 0 All of these methods of affinity maturation are discussed by Vaughan et al. (Nature Biotech., 16, 535-539, 1998). Other antibodies according to the invention may be obtained by conventional immunization and cell fusion procedures as described herein and known in the art. Monoclonal antibodies of the invention may be generated using a variety of known 5 techniques. In general, monoclonal antibodies that bind to specific antigens may be obtained by methods known to those skilled in the art (see, for example, Kohler et al., Nature 256:495, 1975; Coligan et al. (eds.), Current Protocols in Immunology, 1:2.5.12.6.7 (John Wiley & Sons 1991); U.S. Patent Nos. RE 32,011, 4,902,614, 4,543,439, and 4,411,993; Monoclonal Antibodies, Hybridomas: A New Dimension in Biological Analyses, Plenum Press, Kennett, McKearn, and Bechtol (eds.) (1980); and Antibodies: A Laboratory Manual, Harlow and Lane (eds.), Cold Spring Harbor Laboratory Press (1988); Picksley et al., "Production of monoclonal antibodies against proteins expressed in E. coli," in DNA Cloning 2: Expression Systems, 2nd Edition, Glover et al. (eds.), page 93 (Oxford University Press 1995)). Antibody fragments may be derived therefrom using any suitable standard technique such as 5 proteolytic digestion, or optionally, by proteolytic digestion (for example, using papain or pepsin) followed by mild reduction of disulfide bonds and alkylation. Alternatively, such fragments may also be generated by recombinant genetic engineering techniques as described herein. Monoclonal antibodies can be obtained by injecting an animal, for example, a 0 rat, hamster, a rabbit, or preferably a mouse, including for example a transgenic or a knock out, as known in the art, with an immunogen comprising human activin A of SEQ ID NO:225, or a fragment thereof, according to methods known in the art and described herein. The presence of specific antibody production may be monitored after the initial injection and/or after a booster injection by obtaining a serum sample and detecting the presence of an 65 WO 2008/031061 PCT/US2007/077923 antibody that binds to human activin A or peptide using any one of several immunodetection methods known in the art and described herein. From animals producing the desired antibodies, lymphoid cells, most commonly cells from the spleen or lymph node, are removed to obtain B-lymphocytes. The B lymphocytes are then fused with a drug-sensitized myeloma 5 cell fusion partner, preferably one that is syngeneic with the immunized animal and that optionally has other desirable properties (e.g., inability to express endogenous Ig gene products, e.g., P3X63 - Ag 8.653 (ATCC No. CRL 1580); NSO, SP20) to produce hybridomas, which are immortal eukaryotic cell lines. The lymphoid (e.g., spleen) cells and the myeloma cells may be combined for 10 a few minutes with a membrane fusion-promoting agent, such as polyethylene glycol or a nonionic detergent, and then plated at low density on a selective medium that supports the growth of hybridoma cells but not unfused myeloma cells. A preferred selection media is HAT (hypoxanthine, aminopterin, thymidine). After a sufficient time, usually about one to two weeks, colonies of cells are observed. Single colonies are isolated, and antibodies 15 produced by the cells may be tested for binding activity to human activin A, using any one of a variety of immunoassays known in the art and described herein. The hybridomas are cloned (e.g., by limited dilution cloning or by soft agar plaque isolation) and positive clones that produce an antibody specific to activin A are selected and cultured. The monoclonal antibodies from the hybridoma cultures may be isolated from the supernatants of hybridoma 20 cultures. An alternative method for production of a murine monoclonal antibody is to inject the hybridoma cells into the peritoneal cavity of a syngeneic mouse, for example, a mouse that has been treated (e.g., pristane-primed) to promote formation of ascites fluid containing the monoclonal antibody. Monoclonal antibodies can be isolated and purified by a 25 variety of well-established techniques. Such isolation techniques include affinity chromatography with Protein-A Sepharose, size-exclusion chromatography, and ion-exchange chromatography (see, for example, Coligan at pages 2.7.1-2.7.12 and pages 2.9.1-2.9.3; Baines et al., "Purification of Immunoglobulin G (IgG)," in Methods in Molecular Biology, Vol. 10, pages 79-104 (The Humana Press, Inc. 1992)). Monoclonal 30 antibodies may be purified by affinity chromatography using an appropriate ligand selected based on particular properties of the antibody (e.g., heavy or light chain isotype, binding specificity, etc.). Examples of a suitable ligand, immobilized on a solid support, include Protein A, Protein G, an anticonstant region (light chain or heavy chain) antibody, an anti-idiotype antibody, and a TGF-beta binding protein, or fragment or variant thereof. SEA 2079156v l0081428-000011 66 WO 2008/031061 PCT/US2007/077923 An antibody of the present invention may also be a fully human monoclonal antibody. An isolated fully human antibody is provided that specifically binds to the cysteine knot region (amino acids Cl 1-S33 and/or amino acids C81-E1 11) of activin A, wherein the antigen binding protein possesses at least one in vivo biological activity of a human anti 5 activin A antibody. The biological activity may be attenuation of cachexia, for example cachexia in colon cancer, such as in a mouse model of colon cancer described herein. The cachexia amenable to such treatment is associated with loss of body weight, loss of muscle mass, and/or loss of fat mass. The cachexia may be associated with rheumatoid arthritis, such as in a collagen-induced animal model of rheumatoid arthritis. Treatment with a fully human 10 antibody described herein ameliorates the loss of body weight, the loss of muscle mass, and/or the loss of fat mass in vivo in a collagen-induced animal model of rheumatoid arthritis. A fully human antibody described herein ameliorates the loss of body weight in a AAV activin A transfected animal model. A fully human antibody described herein, that specifically binds to the cysteine knot region (amino acids Cl 1-S33 and/or amino acids C8 I 15 E 111) of activin A, inhibits the binding of activin A to activin A receptor in vitro. A fully human isolated antibody that specifically binds to the cysteine knot region (amino acids C1I S33 and/or amino acids C81-E111) of activin A, inhibits the binding of activin A to activin A receptor in vivo. Fully human monoclonal antibodies may be generated by any number of 20 techniques with which those having ordinary skill in the art will be familiar. Such methods include, but are not limited to, Epstein Barr Virus (EBV) transformation of human peripheral blood cells (e.g., containing B lymphocytes), in vitro immunization of human B-cells, fusion of spleen cells from immunized transgenic mice carrying inserted human immunoglobulin genes, isolation from human immunoglobulin V region phage libraries, or other procedures as 25 known in the art and based on the disclosure herein. For example, fully human monoclonal antibodies may be obtained from transgenic mice that have been engineered to produce specific human antibodies in response to antigenic challenge. Methods for obtaining fully human antibodies from transgenic mice are described, for example, by Green et al., Nature Genet. 7:13, 1994; Lonberg et al., Nature 368:856, 1994; Taylor et al., Int. Immun. 6:579, 30 1994; U.S. Patent No. 5,877,397; Bruggemann et al., 1997 Curr. Opin. Biotechnol. 8:455-58; Jakobovits et al., 1995 Ann. N. Y. Acad. Sci. 764:525-35. In this technique, elements of the human heavy and light chain locus are introduced into strains of mice derived from embryonic stem cell lines that contain targeted disruptions of the endogenous heavy chain and light chain loci (see also Bruggemann e t al., Curr. Opin. Biotechnol. 8:455-58 (1997)). SEA 2079156v 0081428-000011 67 WO 2008/031061 PCT/US2007/077923 For example, human immunoglobulin transgenes may be mini-gene constructs, or transloci on yeast artificial chromosomes, which undergo B-cell-specific DNA rearrangement and hypermutation in the mouse lymphoid tissue. Fully human monoclonal antibodies may be obtained by immunizing the transgenic mice, which may then produce human antibodies 5 specific for activin A. Lymphoid cells of the immunized transgenic mice can be used to produce human antibody-secreting hybridomas according to the methods described herein. Polyclonal sera containing fully human antibodies may also be obtained from the blood of the immunized animals. Another method for generating human antibodies of the invention includes 10 immortalizing human peripheral blood cells by EBV transformation. See, e.g., U.S. Patent No. 4,464,456. Such an immortalized B-cell line (or lymaphoblastoid cell line) producing a monoclonal antibody that specifically binds to activin A can be identified by immunodetection methods as provided herein, for example, an ELISA, and then isolated by standard cloning techniques. The stability of the lymphoblastoid cell line producing an 15. anti-activin A antibody may be improved by fusing the transformed cell line with a murine myeloma to produce a mouse-human hybrid cell line according to methods known in the art (see, e.g., Glasky et al., Hybridoma 8:377-89 (1989)). Still another method to generate human monoclonal antibodies is in vitro immunization, which includes priming human splenic B-cells with human activin A, followed by fusion of primed B-cells with a 20 heterohybrid fusion partner. See, e.g., Boerner et al., 1991 J. Immunol. 147:86-95. In certain embodiments, a Becell that is producing an anti-human activin A antibody is selected and the light chain and heavy chain variable regions are cloned from the B-cell according to molecular biology techniques known in the art (WO 92/0255 1; U.S. Patent 5,627,052; Babcook et al., Proc. Natl. Acad. Sci. USA 93:7843-48 (1996)) and 25 described herein. B-cells front an immunized animal may be isolated from the spleen, lymph node, or peripheral blood sample by selecting a cell that is producing an antibody that specifically binds to activin A. B-cells may also be isolated from humans, for example, from a peripheral blood sample. Methods for detecting single B-cells that are producing an antibody with the desired specificity are well known in the art, for example, by plaque 30 formation, fluorescence-activated cell sorting, in vitro stimulation followed by detection of specific antibody, and the like. Methods for selection of specific antibody-producing B-cells include, for example, preparing a single cell suspension of B-cells in soft agar that contains human activin A. Binding of the specific antibody produced by the B-cell to the antigen results in the formation of a complex, which may be visible as an immunoprecipitate. After SEA 2079156v1 0081428-000011 68 WO 2008/031061 PCT/US2007/077923 the B-cells producing the desired antibody are selected, the specific antibody genes may be cloned by isolating and amplifying DNA or mRNA according to methods known in the art and described herein. An additional method for obtaining antibodies of the invention is by phage 5 display. See, e.g., Winter et al., 1994Annu. Rev. Immunol. 12:433-55; Burton et al., 1994 Adv. Immunol. 57:191-280. Human or marine jimmunoglobulin variable region gene combinatorial libraries may be created in phage vectors that can be screened to select Ig fragments (Fab, Fv, sFv, or multimers thereof) that bind specifically to TGF-beta binding protein or variant or fragment thereof. See, e.g., U.S. Patent No. 5,223,409; Huse et al., 1989 10 Science 246:1275-81; Sastry et al., Proc. Natl. Acad. Sci. USA 86:5728-32 (1989); Alting-Mees et al., Strategies in Molecular Biology 3:1-9 (1990); Kang et al., 1991 Proc. Nati. A cad. Sci. USA 88:4363-66; Hoogenboom et al., 1992 J. Molec. Biol. 227:381-388; Schlebusch et al., 1997 Hybridoma 16:47-52 and references cited therein. For example, a library containing a plurality of polynucleotide sequences encoding Ig variable region 15 fragments may be inserted into the genome of a filamentous bacteriophage, such as M13 or a variant thereof, in frame with the sequence encoding a phage coat protein. A fusion protein may be a fusion of the coat protein with the light chain variable region domain and/or with the heavy chain variable region domain. According to certain embodiments, immunoglobulin Fab fragments may also be displayed on a phage particle (see, e.g., U.S. Patent No. 20 5,698,426). Heavy and light chain immunoglobulin cDNA expression libraries may also be prepared in lambda phage, for example, using XlmmunoZapTM(H) and XlmmunoZap TM(L) vectors (Stratagene, La Jolla, California). Briefly, mRNA is isolated from a B-cell population, and used to create heavy and light chain immunoglobulin cDNA expression 25 libraries in the XImmunoZap(H) and XImmunoZap(L) vectors. These vectors may be screened individually or co-expressed to form Fab fragments or antibodies (see Huse et al., supra; see also Sastry et al., supra). Positive plaques may subsequently be converted to a non-lytic plasmid that allows high level expression of monoclonal antibody fragments from E. coli. 30 In one embodiment, in a hybridoma the variable regions of a gene expressing a monoclonal antibody of interest are amplified using nucleotide primers. These primers may be synthesized by one of ordinary skill in the art, or may be purchased from commercially available sources. (See, e.g., Stratagene (La Jolla, California), which sells primers for mouse and human variable regions including, among others, primers for VHa, VHb, VHe, VHd, CHI, VL SEA 2079156v 10081428-000011 69 WO 2008/031061 PCT/US2007/077923 and CL regions.) These primers may be used to amplify heavy or light chain variable regions, which may then be inserted into vectors such as ImmunoZAP mH or ImmunoZAP mL (Stratagene), respectively. These vectors may then be introduced into E. coli, yeast, or mammalian-based systems for expression. Large amounts of a single-chain protein 5 containing a fusion of the VH and VL domains may be produced using these methods (see Bird et al., Science 242:423-426, 1988). Once cells producing antibodies according to the invention have been obtained using any of the above-described immunization and other techniques, the specific antibody genes may be cloned by isolating and amplifying DNA or mRNA therefrom according to 10 standard procedures as described herein. The antibodies produced therefrom may be sequenced and the CDRs identified and the DNA coding for the CDRs may be manipulated as described previously to generate other antibodies according to the invention. Activin A binding agents of the present invention preferably modulate activin A function in the cell-based assay described herein and/or the in vivo assay described herein 15 and/or bind to one or more of the cysteine knot domains described herein and/or cross-block the binding of one of the antibodies described in this application and/or are cross-blocked from binding activin A by one of the antibodies described in this application. Accordingly such binding agents can be identified using the assays described herein. In certain embodiments, antibodies are generated by first identifying 20 antibodies that bind to one more of the cysteine knot domains provided herein and/or neutralize in the cell-based and/or in vivo assays described herein and/or cross-block the antibodies described in this application and/or are cross-blocked from binding activin A by one of the antibodies described in this application. The CDR regions from these antibodies are then used to insert into appropriate biocompatible frameworks to generate activin A 25 binding agents. The non-CDR portion of the binding agent may be composed of amino acids, or may be a non-protein molecule. The assays described herein allow the characterization of binding agents. Preferably the binding agents of the present invention are antibodies as defined herein. It will be understood by one skilled in the art that some proteins, such as 30 antibodies, may undergo a variety of posttranslational modifications. The type and extent of these modifications often depends on the host cell line used to express the protein as well as the culture conditions. Such modifications may include variations in glycosylation, methionine oxidation, diketopiperizine formation, aspartate isomerization and asparagine deamidation. A frequent modification is the loss of a carboxy-terminal basic residue (such as SEA 2079156v1 0081428-000011 70 WO 2008/031061 PCT/US2007/077923 lysine or arginine) due to the action of carboxypeptidases (as described in Harris, R.J. Journal of Chromatography 705:129-134, 1995). Nucleic acids 5 In one aspect, the present invention provides isolated nucleic acid molecules. The nucleic acids comprise, for example, polynucleotides that encode all or part of an antigen binding protein, for example, one or both chains of an antibody of the invention, or a fragment, derivative, mutein, or variant thereof, polynucleotides sufficient for use as hybridization probes, PCR primers or sequencing primers for identifying, analyzing, mutating 10 or amplifying a polynucleotide encoding a polypeptide, anti-sense nucleic acids for inhibiting expression of a polynucleotide, and complementary sequences of the foregoing. The nucleic acids can be any length. They can be, for example, 5, 10, 15, 20, 25, 30, 35, 40, 45, 50, 75, 100, 125, 150, 175, 200, 250, 300, 350, 400, 450, 500, 750, 1,000, 1,500, 3,000, 5,000 or more nucleotides in length, and/or can comprise one or more additional sequences, for 15 example, regulatory sequences, and/or be part of a larger nucleic acid, for example, a vector. The nucleic acids can be single-stranded or double-stranded and can comprise RNA and/or DNA nucleotides, and artificial variants thereof (e.g., peptide nucleic acids). Nucleic acids encoding antibody polypeptides (e.g., heavy or light chain, variable domain only, or full length) may be isolated from B-cells of mice that have been 20 immunized with activin A. The nucleic acid may be isolated by conventional procedures such as polymerase chain reaction (PCR). Nucleic acid sequences encoding the variable regions of the heavy and light chain variable regions are shown above. The skilled artisan will appreciate that, due to the degeneracy of the genetic code, each of the polypeptide sequences disclosed herein-is 25 encoded by a large number of other nucleic acid sequences. The present invention provides each degenerate nucleotide sequence encoding each antigen binding protein of the invention. The invention further provides nucleic acids that hybridize to other nucleic acids (e.g., nucleic acids comprising a nucleotide sequence of any of Al-A 14) under particular hybridization conditions. Methods for hybridizing nucleic acids are well-known in 30 the art. See, e.g., Curr. Prot. in Mol. Biol., John Wiley & Sons, N.Y. (1989), 6.3.1-6.3.6. As defined herein, a moderately stringent hybridization condition uses a prewashing solution containing 5X sodium chloride/sodium citrate (SSC), 0.5% SDS, 1.0 mM EDTA (pH 8.0), hybridization buffer of about 50% formamide, 6X SSC, and a hybridization temperature of SEA 2079156v1 0081428-000011 71 WO 2008/031061 PCT/US2007/077923 550 C (or other similar hybridization solutions, such as one containing about 50% formarnide, with a hybridization temperature of 42 C), and washing conditions of 60' C, in 0.5X SSC, 0.1% SDS. A stringent hybridization condition hybridizes in 6X SSC at 45' C, followed by one or more washes in 0.1X SSC, 0.2% SDS at 680 C. Furthermore, one of skill in the art 5 can manipulate the hybridization and/or washing conditions to increase or decrease the stringency of hybridization such that nucleic acids comprising nucleotide sequences that are at least 65, 70, 75, 80, 85, 90, 95, 98 or 99% identical to each other typically remain hybridized to each other. The basic parameters affecting the choice of hybridization conditions and guidance for devising suitable conditions are set forth by, for example, 10 Sambrook, Fritsch, and Maniatis (1989, Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., chapters 9 and 11; and Curr. Prot. in Mol. Biol. 1995, Ausubel et al., eds., John Wiley & Sons, Inc., sections 2.10 and 6.3 6.4), and can be readily determined by those having ordinary skill in the art based on, for example, the length and/or base composition of the DNA. 15 Changes can be introduced by mutation into a nucleic acid, thereby leading to changes in the amino acid sequence of a polypeptide (e.g., an antigen binding protein) that it encodes. Mutations can be introduced using any technique known in the art. In one embodiment, one or more particular amino acid residues are changed using, for example, a site-directed mutagenesis protocol. In another embodiment, one or more randomly selected 20 residues is changed using, for example, a random mutagenesis protocol. However it is made, a mutant polypeptide can be expressed and screened for a desired property (e.g., binding to activin A). Mutations can be introduced into a nucleic acid without significantly altering the biological activity of a polypeptide that it encodes. For example, one can make 25 nucleotide substitutions leading to amino acid substitutions at non-essential amino acid residues. In one embodiment, a nucleotide sequence provided herein for A1-A14, or a desired fragment, variant, or derivative thereof, is mutated such that it encodes an amino acid sequence comprising one or more deletions or substitutions of amino acid residues that are shown herein for Al-A14 to be residues where two or more sequences differ. As described 30 herein inter alia, A1-A14 refers to 14 sequences, A1, and A14, as well as the 12 intervening amino acid residues. In another embodiment, the mutagenesis inserts an amino acid adjacent to one or more amino acid residues shown herein for Al-A14 to be residues where two or more sequences differ. Alternatively, one or more mutations can be introduced into a nucleic acid that selectively change the biological activity (e.g., binding of activin A) of a SEA 2079156vl 0081428-000011 72 WO 2008/031061 PCT/US2007/077923 polypeptide that it encodes. For example, the mutation can quantitatively or qualitatively change the biological activity. Examples of quantitative changes include increasing, reducing or eliminating the activity. Examples of qualitative changes include changing the antigen specificity of an antigen binding protein. 5 In another aspect, the present invention provides nucleic acid molecules that are suitable for use as primers or hybridization probes for the detection of nucleic acid sequences of the invention. A nucleic acid molecule of the invention can comprise only a portion of a nucleic acid sequence encoding a full-length polypeptide of the invention, for example, a fragment that can be used as a probe or primer or a fragment encoding an active 10 portion (e.g., an activin A binding portion) of a polypeptide of the invention. Probes based on the sequence of a nucleic acid of the invention can be used to detect the nucleic acid or similar nucleic acids, for example, transcripts encoding a polypeptide of the invention. The probe can comprise a label group, e.g., a radioisotope, a fluorescent compound, an enzyme, or an enzyme co-factor. Such probes can be used to 15 identify a cell that expresses the polypeptide. In another aspect, the present invention provides vectors comprising a nucleic acid encoding a polypeptide of the invention or a portion thereof. Examples of vectors include, but are not limited to, plasmids, viral vectors, non-episomal mammalian vectors and expression vectors, for example, recombinant expression vectors. 20 The recombinant expression vectors of the invention can comprise a nucleic acid of the invention in a form suitable for expression of the nucleic acid in a host cell. The recombinant expression vectors include one or more regulatory sequences, selected on the basis of the host cells to be used for expression, which is operably linked to the nucleic acid sequence to be expressed. Regulatory sequences include those that direct constitutive 25 expression of a nucleotide sequence in many types of host cells (e.g., SV40 early gene enhancer, Rous sarcoma virus promoter and cytomegalovirus promoter), those that direct expression of the nucleotide sequence only in certain host cells (e.g., tissue-specific regulatory sequences, see Voss et.al., 1986, Trends Biochem. Sci. 11:287, Maniatis et al., 1987, Science 236:1237, incorporated by reference herein in their entireties), and those that 30 direct inducible expression of a nucleotide sequence in response to particular treatment or condition (e.g., the metallothionin promoter in mammalian cells and the tet-responsive and/or streptomycin responsive promoter in both prokaryotic and eukaiyotic systems (see id.). It will be appreciated by those skilled in the art that the design of the expression vector can depend on such factors as the choice of the host cell to be transformed, the level of expression SEA 2079156vl 0081428-000011 73 WO 2008/031061 PCT/US2007/077923 of protein desired, etc. The expression vectors of the invention can be introduced into host cells to thereby produce proteins or peptides, including fusion proteins or peptides, encoded by nucleic acids as described herein. In another aspect, the present invention provides host cells into which a 5 recombinant expression vector of the invention has been introduced. A host cell can be any prokaryotic cell (for example, E coli) or eukaryotic cell (for example, yeast, insect, or mammalian cells (e.g., CHO cells)). Vector DNA can be introduced into prokaryotic or eukaryotic cells via conventional transformation or transfection techniques. For stable transfection of mammalian cells, it is known that, depending upon the expression vector and 10 transfection technique used, only a small fraction of cells may integrate the foreign DNA into their genome. In order to identify and select these integrants, a gene that encodes a selectable marker (e.g., for resistance to antibiotics) is generally introduced into the host cells along with the gene of interest. Preferred selectable markers include those which confer resistance to drugs, such as G418, hygromycin and methotrexate. Cells stably transfected with the 15 introduced nucleic acid can be identified by drug selection (e.g., cells that have incorporated the selectable marker gene will survive, while the other cells die), among other methods. Indications In one aspect, the present invention provides methods of treating a subject. 20 The method can, for example, have a generally beneficial effect on the subject's health, e.g., it can increase the subject's expected longevity. Alternatively, the method can, for example, treat, prevent, cure, relieve, or ameliorate ("treat") a disease, disorder, condition, or illness ("a condition"). Among the conditions to be treated in accordance with the present invention are conditions characterized by inappropriate expression or activity of activin A. In some such 25 conditions, the expression or activity level is too high, and the treatment comprises administering an activin A antagonist as described herein. One example of a type of condition that can be treated using the methods and compositions of the present invention is a condition that involves cell growth, for example, a cancerous condition which is accompanied by cachexia. Thus, in one embodiment, the 30 present invention provides compositions and methods for treating a cancerous condition. In particular, the cancerous condition is a gonadal cancer, including tumors of the ovary and testis. (Fujii, Y. et al., Am. J. Phys. Endocrin. Metab., 286:E927-E931, 2004; Reis, F. M. et al., . Clin. Endocrin. 87:2277-2282, 2005.) Activin A is known for its action in stimulating SEA 2079156vl 0081428-000011 74 WO 2008/031061 PCT/US2007/077923 FSH biosynthesis and secretion in the pituitary gland, and has a physiological role in the regulation of gonadal function. Activin A has been associated with many types of human cancers and in particular with tumors of the reproductive system. Specifically, overexpression or deregulation of activin A has been implicated in ovarian cancer, (Menon 5 U, et al., BJOG: An International Journal of Obstetrics & Gynaecology; 107(9):1069-74, 2000. Choi KC, et al., Molecular & Cellular Endocrinology. 174(1-2):99-110, 2001; Zheng W, et al., American Journal of Reproductive Immunology. 44(2):104-13, 2000; Lambert Messerlian GM, et al., Gynecologic Oncology. 74(l):93-7, 1999; Steller MD, et al., Molecular Cancer Research: MCR. 3(1):50-61, 2005; Corbellis L., et al., Journal of the 10 Society for Gynecologic Investigation. 11(4):203-6, 2004; Welt CK, et al., Journal of Clinical Endocrinology & Metabolism. 82(11):3720-7, 1997; and Harada K., et al., Journal of Clinical Endocrinology & Metabolism. 81(6):2125-30, 1996, endometrial adenocarcinoma Otani, T, et a., Gynecologic Oncology. 83(1):31-8, 2001; Tanaka T, et al., International Journal of Oncology. 23(3):657-63, 2003 and prostate cancer (Thomas TZ, et al., Journal of 15 Clinical Endocrinology & Metabolism. 82(11):3851-8, 1997; Zhang, Z, et al., Biochemical & Biophysical Research Communications. 234(2):362-5, 1997; and Risbridger GP, et al., Molecular & Cellular Endocrinology. 180(1-2):149-53, 2001 The cancerous condition can be any cancerous condition that can be treated using the compositions comprised herein, for example, activin A antigen binding proteins 20 such as anti-activin A antibodies, antibody fragments, or antibody derivatives. Examples of cancerous conditions include, for example, acute lymphoblastic leukemia, adrenocortical carcinoma, AIDS-related cancers, AIDS-related lymphoma, anal cancer, childhood cerebellar astrocytoma, childhood cerebral astrocytoma, basal cell carcinoma, extrahepatic bile duct cancer, bladder cancer, osteosarcoma/malignant fibrous histiocytoma bone cancer, brain 25 tumors (e.g., brain stem glioma, cerebellar astrocytoma, cerebral astrocytoma/malignant glioma, ependymoma, medulloblastoma, supratentorial primitive neuroectodermal tumors, visual pathway and hypothalamic glioma), breast cancer, bronchial adenomas/carcinoids, Burkitt's Lymphoma, carcinoid tumor, gastrointestinal carcinoid tumor, carcinoma of unknown primary, primary central nervous system, cerebellar astrocytoma, cerebral 30 astrocytoma/malignant glioma, cervical cancer, childhood cancers, chronic lymphocytic leukemia, chronic myelogenous leukemia, chronic myeloproliferative disorders, colon cancer, colorectal cancer, cutaneous t-cell lymphoma, endometrial cancer, ependymoma, esophageal cancer, ewing's family of tumors, extracranial germ cell tumor, extragonadal germ cell tumor, extrahepatic bile duct cancer, intraocular melanoma eye cancer, retinoblastoma eye SEA 2079156vl 0081428-000011 75 WO 2008/031061 PCT/US2007/077923 cancer, gallbladder cancer, gastric (stomach) cancer, gastrointestinal carcinoid tumor, germ cell tumors (e.g., extracranial, extragonadal, and ovarian), gestational trophoblastic tumor, glioma (e.g., adult, childhood brain stem, childhood cerebral astrocytoma, childhood visual pathway and hypothalamic), hairy cell leukemia, head and neck cancer, hepatocellular (liver) 5 cancer, Hodgkin's lymphoma, hypopharyngeal cancer, hypothalamic and visual pathway glioma, intraocular melanoma, islet cell carcinoma (endocrine pancreas), Kaposi's Sarcoma, kidney (renal cell) cancer, laryngeal cancer, leukemia (e.g., acute lymphoblastic, acute myeloid, chronic lymphocytic, chronic myelogenous, and hairy cell), lip and oral cavity cancer, liver cancer, non-small cell lung cancer, small cell lung cancer, lymphoma (e.g., 10 AIDS-related, Burkitt's, cutaneous t-cell, Hodgkin's, non-Hodgkin's, and primary central nervous system), Waldenstram's Macroglobulinernia, malignant fibrous histiocytoma of bone/osteosarcoma, medulloblastoma, melanoma, intraocular (eye) melanoma, Merkel cell carcinoma, mesothelioma, metastatic squamous neck cancer with occult primary, multiple endocrine neoplasia syndrome, multiple myeloma/plasma cell neoplasm, mycosis fungoides, 15 myelodysplastic syndromes, myelodysplastic/myeloproliferative diseases, myelogenous leukemia, chronic myeloid leukemia, multiple myeloma, chronic myeloproliferative disorders, nasal cavity and paranasal sinus cancer, nasopharyngeal cancer, neuroblastoma, oral cancer, oropharyngeal cancer, osteosarcoma/malignant fibrous histiocytoma of bone, ovarian cancer, ovarian epithelial cancer, ovarian germ cell tumor, ovarian low malignant 20 potential tumor, pancreatic cancer, islet cell pancreatic cancer, paranasal sinus and nasal cavity cancer, parathyroid cancer, penile cancer, pheochromocytoma, pineoblastoma, pituitary tumor, plasma cell neoplasm/multiple myeloma, pleuropulmonary blastoma, primary central nervous system lymphoma, prostate cancer, rectal cancer, renal cell (kidney) cancer, renal pelvis and ureter transitional cell cancer, retinoblastoma, rhabdomyosarcoma, 25 salivary gland cancer, soft tissue sarcoma, uterine sarcoma, Sezary syndrome, non-melanoma skin cancer, merkel cell skin carcinoma, small intestine cancer, soft tissue sarcoma, squamous cell carcinoma, cutaneous t-cell lymphoma, testicular cancer, thymorna, thymic carcinoma, thy-oid cancer, gestational trophoblastic tumor, carcinoma of unknown primary site, cancer of unknown primary site, urethral cancer, endometrial uterine cancer, uterine sarcoma, 30 vaginal cancer, visual pathway and hypothalamic glioma, vulvar cancer, Waldenstram's Macroglobulinemia, and Wilms' Tumor. An oligopeptide or polypeptide is within the scope of the invention if it has an amino acid sequence that is at least 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% SEA 2079156vl 0081428-000011 76 WO 2008/031061 PCT/US2007/077923 identical to least one of the CDR's of antibodies Al-A14; and/or to a CDR of a activin A binding agent that cross-blocks the binding of at least one of antibodies Al-A 14 to activin A, and/or is cross-blocked from binding to activin A by at least one of antibodies Al-A14; and/or to a CDR of a activin A binding agent wherein the binding agent can block the binding 5 of activin A to activin A receptor. Activin A binding agent polypeptides and antibodies are within the scope of the invention if they have amino acid sequences that are at least 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identical to a variable region of at least one of antibodies Al-A14, and cross-block the binding of at least one of antibodies A 1 10 A14 to activin A, and/or are cross-blocked from binding to activin A by at least one of antibodies Al-A 14; and/or can block the inhibitory effect of activin A on an activin A receptor. Therapeutic antibodies may be used that specifically bind to intact activin A, in which sequences in the region of approximately C I1-S33 (first loop) and approximately 15 C81-EII (second loop) retain the conformation of native activin A. Such mapping and binding is described in Example 6, below. Antibodies according to the invention may have a binding affinity for human activin A of less than or equal to 1 x 10-M, less than or equal to 1 x 10AM, less than or equal to 1 x 10~ 9 M, less than or equal to 1 x 10' 0 M, less than or equal to 1 x 10"M, or less than or 20 equal to 1 x 10 12 M. The affinity of an antibody or binding partner, as well as the extent to which an antibody inhibits binding, can be determined by one of ordinary skill in the art using conventional techniques, for example those described by Scatchard et al. (Ann. N.Y. Acad. Sci. 51:660-672 (1949)) or by surface plasmon resonance (SPR; BlAcore, Biosensor, 25 Piscataway, NJ). For surface plasmon resonance, target molecules are immobilized on a solid phase and exposed to ligands in a mobile phase running along a flow cell. If ligand binding to the immobilized target occurs, the local refractive index changes, leading to a change in SPR angle, which can be monitored in real time by detecting changes in the intensity of the reflected light. The rates of change of the SPR signal can be analyzed to yield apparent rate 30 constants for the association and dissociation phases of the binding reaction. The ratio of these values gives the apparent equilibrium constant (affinity) (see, e.g., Wolff et al., Cancer Res. 53:2560-65 (1993)). An antibody according to the present invention may belong to any immunoglobin class, for example IgG, IgE, IgM, IgD, or IgA. It may be obtained from or SEA 2079156v1 0081428-000011 77 WO 2008/031061 PCT/US2007/077923 derived from an animal, for example, fowl (e.g., chicken) and mammals, which includes but is not limited to a mouse, rat, hamster, rabbit, or other rodent, cow, horse, sheep, goat, camel, human, or other primate. The antibody may be an internalizing antibody. Production of antibodies is disclosed generally in U.S. Patent Publication No. 2004/0146888 Al. 5 Characterization Assays In the methods described above to generate antibodies according to the invention, including the manipulation of the specific A1-A14 CDRs into new frameworks and/or constant regions, appropriate assays are available to select the desired antibodies (i.e. 10 assays for determining binding affinity to activin A; cross-blocking assays; Biacore-based competition binding assay;" in vivo assays). Therapeutic methods and administration of antigen binding proteins Certain methods provided herein comprise administering an activin A binding 15 antigen binding protein to a subject, thereby reducing an activin A-induced biological response that plays a role in a particular condition. In particular embodiments, methods of the invention involve contacting endogenous activin A with an activin A binding antigen binding protein, e.g., via administration to a subject or in an ex vivo procedure. The term "treatment" encompasses alleviation or prevention of at least one 20 symptom or other aspect of a disorder, or reduction of disease severity, and the like. In addition, "treatment" further relates to administering a therapeutic agent described herein for preventing or alleviating at least one symptom or other aspect of a disorder in a subject in need thereof. An antigen binding protein need not effect a complete cure, or eradicate every symptom or manifestation of a disease, to constitute a viable therapeutic agent. As is 25 recognized in the pertinent field, drugs employed as therapeutic agents may reduce the severity of a given disease state, but need not abolish every manifestation of the disease to be regarded as useful therapeutic agents. Similarly, a prophylactically administered treatment need not be completely effective in preventing the onset of a condition in order to constitute a viable prophylactic agent. Simply reducing the impact of a disease (for example, by reducing 30 thenumber or severity of its symptoms, or by increasing the effectiveness of another treatment, or by producing another beneficial effect), or reducing the likelihood that the disease will occur or worsen in a subject, is sufficient. One embodiment of the invention is directed to a method comprising administering to a patient an activin A antagonist in an SEA 2079156v1 0081428-000011 78 WO 2008/031061 PCT/US2007/077923 amount and for a time sufficient to induce a sustained improvement over baseline of an indicator that reflects the severity of the particular disorder. As is understood in the pertinent field, pharmaceutical compositions comprising the molecules of the invention are administered to a subject in need thereof in a 5 manner appropriate to the indication. Pharmaceutical compositions may be administered by any suitable technique, including but not limited to parenterally, topically, or by inhalation. If injected, the pharmaceutical composition can be administered, for example, via intra articular, intravenous, intramuscular, intralesional, intraperitoneal or subcutaneous routes, by bolus injection, or continuous infusion. Localized administration, e.g. at a site of disease or 10 injury is contemplated, as are transdermal delivery and sustained release from implants. Delivery by inhalation includes, for example, nasal or oral inhalation, use of a nebulizer, inhalation of the antagonist in aerosol form, and the like. Other alternatives include eyedrops; oral preparations including pills, syrups, lozenges or chewing gum; and topical preparations such as lotions, gels, sprays, and ointments. 15 Use of antigen binding proteins in ex vivo procedures also is contemplated. For example, a patient's blood or other bodily fluid may be contacted with an antigen binding protein that binds full-length activin A, one or more activin A isoform, or other partial length activin A ex vivo. The antigen binding protein may be bound to a suitable insoluble matrix or solid support material. 20 Advantageously, antigen binding proteins are administered in the form of a composition comprising one or more additional components such as a physiologically acceptable carrier, excipient or diluent. Optionally, the composition additionally comprises one or more physiologically active agents, for example, a second activin A receptor inhibiting substance, an anti-angiogenic substance, a chemotherapeutic substance, an 25 analgesic substance, etc., non-exclusive examples of which are provided herein. In various particular embodiments, the composition comprises one, two, three, four, five, or six physiologically active agents in addition to an activin A-binding antigen binding protein In one embodiment, the pharmaceutical composition comprise an antigen binding protein of the invention together with one or more substances selected from the group 30 consisting of a buffer, an antioxidant such as ascorbic acid, a low molecular weight polypeptide (such as those having fewer than 10 amino acids), a protein, an amino acid, a carbohydrate such as glucose, sucrose or dextrins, a chelating agent such as EDTA, glutathione, a stabilizer, and an excipient. Neutral buffered saline or saline mixed with conspecific serum albumin are examples of appropriate diluents. In accordance with SEA 2079156vl 0081428-000011 79 WO 2008/031061 PCT/US2007/077923 appropriate industry standards, preservatives such as benzyl alcohol may also be added. The composition may be formulated as a lyophilizate using appropriate excipient solutions'(e.g., sucrose) as diluents. Suitable components are nontoxic to recipients at the dosages and concentrations employed. Further examples of components that may be employed in 5 pharmaceutical formulations are presented in Remington's Pharmaceutical Sciences, 16 th Ed. (1980) and 20 th Ed. (2000), Mack Publishing Company, Easton, PA. Kits for use by medical practitioners include an antigen binding protein of the invention and a label or other instructions for use in treating any of the conditions discussed herein. In one embodiment, the kit includes a sterile preparation of one or more antigen 10 binding proteins, which may be in the form of a composition as disclosed above, and may be in one or more vials. Dosages and the frequency of administration may vary according to such factors as the route of administration, the particular antigen binding proteins employed, the nature and severity of the disease to be treated, whether the condition is acute or chronic, and 15 the size and general condition of the subject. Appropriate dosages can be determined by procedures known in the pertinent art, e.g. in clinical trials that may involve dose escalation studies. An antigen binding protein of the invention may be administered, for example, once or more than once, e.g., at regular intervals over a period of time. In particular 20 embodiments, an antigen binding protein is administered over a period of at least a month or more, e.g., for one, two, or three months or even indefinitely. For treating chronic conditions, long-term treatment is generally most effective. However, for treating acute conditions, administration for shorter periods, e.g. from one to six weeks, may be sufficient. In general, the antigen binding protein is administered until the patient manifests a medically relevant 25 degree of improvement over baseline for the chosen indicator or indicators. Particular embodiments of the present invention involve administering an antigen binding protein at a dosage of from about I ng of antigen binding protein per kg of subject's weight per day ("1 ng/kg/day") to about 10 mg/kg/day, more preferably from about 500 ng/kg/day to about 5 mg/kg/day, and most preferably from about 5 pg/kg/day to about 2 30 mg/kg/day, to a subject. In additional embodiments, an antigen binding protein is administered to adults one time per week, two times per week, or three or more times per week, to treat an activin A mediated disease, condition or disorder, e.g., a medical disorder disclosed herein. If injected, the effective amount of antigen binding protein per adult dose may range from 1-20 mg/m 2 , and preferably is about 5-12 mg/m 2 . Alternatively, a flat dose SEA 2079156vl 0081428-000011 80 WO 2008/031061 PCT/US2007/077923 may be administered; the amount may range from 5-100 mg/dose. One range for a flat dose is about 20-30 mg per dose. In one embodiment of the invention, a flat dose of 25 mg/dose is repeatedly administered by injection. If a route of administration other than injection is used, the dose is appropriately adjusted in accordance with standard medical practices. One 5 example of a therapeutic regimen involves injecting a dose of about 20-30 mg of antigen binding protein one to three times per week over a period of at least three weeks, though treatment for longer periods may be necessary to induce the desired degree of improvement. For pediatric subjects (age 4-17), one exemplary suitable regimen involves the subcutaneous injection of 0.4 mg/kg, up to a maximum dose of 25 mg of antigen binding protein 10 administered two or three times per week. Particular embodiments of the methods provided herein involve subcutaneous injection of from 0.5 mg to 10 mg, preferably from 3 to 5 mg, of an antigen binding protein, once or twice per week. Another embodiment is directed to pulmonary administration (e.g., by nebulizer) of 3 or more mg of antigen binding protein once a week. 15 Examples of therapeutic regimens provided herein comprise subcutaneous injection of an antigen binding protein once a week, at a dose of 1.5 to 3 mg, to treat a condition in which activin A signaling plays a role. Examples of such conditions are provided herein and include, for example, cachexia, cancer, rheumatoid arthritis, and all conditions in which loss of body weight, body mass, body fat, or inability to maintain body 20 weight,.body mass, body fat, play a role. Weekly administration of antigen binding protein is continued until a desired result is achieved, e.g., the subject's symptoms subside. Treatment may resume as needed, or, alternatively, maintenance doses may be administered. Other examples of therapeutic regimens provided herein comprise subcutaneous or intravenous administration of a dose of 1, 3, 5, 6, 7, 8, 9, 10, 11, 12, 15, or 25 20 milligrams of an activin A inhibitor of the present invention per kilogram body mass of the subject (mg/kg). The dose can be administered once to the subject, or more than once at a certain interval, for example, once a day, three times a week, twice a week, once a week, three times a month, twice a month, once a month, once every two months, once every three months, once every six months, or once a year. The duration of the treatment, and any 30 changes to the dose and/or frequency of treatment, can be altered or varied during the course of treatment in order to meet the particular needs of the subject. In another embodiment, an antigen binding protein is administered to the subject in an amount and for a time sufficient to induce an improvement, preferably a sustained improvement, in at least one indicator that reflects the severity of the disorder that SEA 2079156v1 0081428-000011 81 WO 2008/031061 PCT/US2007/077923 is being treated. Various indicators that reflect the extent of the subject's illness, disease or condition may be assessed for determining whether the amount and time of the treatment is sufficient. Such indicators include, for example, clinically recognized indicators of disease severity, symptoms, or manifestations of the disorder in question. In one embodiment, an 5 improvement is considered to be sustained if the subject exhibits the improvement on at least two occasions separated by two to four weeks. The degree of improvement generally is determined by a physician, who may make this determination based on signs, symptoms, biopsies, or other test results, and who may also employ questionnaires that are administered to the subject, such as quality-of-life questionnaires developed for a given disease. 10 A subject's levels of activin A may be monitored before, during and/or after treatment with an antigen binding protein, to detect changes, if any, in their levels. For some disorders, the incidence of elevated activin A levels may vary according to such factors as the stage of the disease or the particular form of the disease. Known techniques may be employed for measuring activin A levels, e.g., in a subject's serum. Activin A levels in blood 15 samples may be measured using any suitable technique, for example, ELISA. Particular embodiments of methods and compositions of the invention involve the use of an antigen binding protein and one or more additional activin A antagonists, for example, two or more antigen binding proteins of the invention, or an antigen binding protein of the invention and one or more other activin A antagonists. In further embodiments, 20 antigen binding protein are administered alone or in combination with other agents useful for treating the condition with which the patient is afflicted. Examples of such agents include both proteinaceous and non-proteinaceous drugs. When multiple therapeutics are co administered, dosages may be adjusted accordingly, as is recognized in the pertinent art. "Co-administration" and combination therapy are not limited to simultaneous administration, 25 but also include treatment regimens in which an antigen binding protein is administered at least once during a course of treatment that involves administering at least one other therapeutic agent to the patient. Examples of other agents that may be co-administered with an antigen binding protein are other antigen binding proteins or therapeutic polypeptides that are chosen 30 according to the particular condition to be treated. Alternatively, non-proteinaceous drugs that are useful in treating one of the particular conditions discussed above may be co administered with an activin A antagonist. SEA 2079156v1 0081428-000011 82 WO 2008/031061 PCT/US2007/077923 Combination therapy In another aspect, the present invention provides a method of treating a subject with an activin A inhibiting antigen binding protein and one or more other treatments. In one embodiment, such a combination therapy achieves synergy or an additive effect by, for 5 example, attacking multiple sites or molecular targets in a tumor. Types of combination therapies that can be used in connection with the present invention include inhibiting or activating (as appropriate) multiple nodes in a single disease-related pathway, multiple pathways in a target cell, and multiple cell types within a target tissue (e.g., within a tumor). For example, an activin A inhibitor of the present invention can be combined with a treatment 10 that promotes apoptosis or inhibits angiogenesis. In another embodiment, a targeted agent, that, when used by itself, fails to elicit a therapeutically desired effect, could be used to, for example, sensitize cancer cells or augment treatment effect of other agents. In another embodiment, an activin A inhibitor according to the invention is used in combination with a cytotoxic drug or other targeted agent that induces apoptosis. In another embodiment, an 15 activin A inhibitor is used in combination with one or more agents that inhibit different targets that are involved in cell survival (e.g., PKB, mTOR), different receptor tyrosine kinases (e.g., ErbB1, ErbB2, c-Met, c-kit), or different cell types (e.g., KDR inhibitors, c fms). In another embodiment, an activin A inhibitor of the invention is added to the existing standard of care for a particular condition. Examples of therapeutic agents include, but are 20 not limited to, gerncitabine, taxol, taxotere, and CPT- 11. In another embodiment, the method comprises administering one or more of the activin A antagonists described herein and one or more other treatments (e.g., a therapeutic or palliative treatment), for example, anti-cancer treatments (such as surgery, ultrasound, radiotherapy, chemotherapy, or treatment with another anti-cancer agent). Where 25 a method comprises administering more than one treatment to a subject, it is to be understood that the order, timing, number, concentration, and volume of the administrations is limited only by the medical requirements and limitations of the treatment, i.e., two treatments can be administered to the subject, e.g., simultaneously, consecutively, alternately, or according to any other regimen. Examples of agents that can be administered in combination with the 30 activin A antagonists described herein include, but are not limited to, neutrophil-boosting agents, irinothecan, SN-38, gerncitabine, herstatin, or an activin A-binding herstatin derivative (as described, for example, in U.S. Pat. App. No. 05/0272637), AVASTIN@ (Genentech, South San Francisco, CA), HERCEPTIN@ (Genentech), RITUXAN@ SEA2079156vi 001428-000011 83 WO 2008/031061 PCT/US2007/077923 (Genentech), ARIMIDEX@ (AstraZeneca, Wilmington, DE), IRESSA@ (AstraZeneca), BEXXAR@ (Corixa, Seattle, WA), ZEVALIN@ (Biogen Idec, Cambridge, MA), ERBITUX@ (Imclone Systems Inc., New York, NY), GEMZAR@ (Eli Lilly and Co., Indianapolis, IN), CAMPTOSAR@ (Pfizer, New York, NY), GLEEVEC@ (Novartis), SU 5 11248 (Pfizer), BMS-354825 (Bristol-Myers Squibb), panitumumab (Abgenix, Fremont, CA/Amgen Inc., Thousand Oaks, CA), and denosumab (Amgen Inc., Thousand Oaks, CA). The development of suitable dosing and treatment regimens for using the particular compositions described herein in a variety of treatment regimens, including e.g., subcutaneous, oral, parenteral, intravenous, intranasal, and intramuscular administration and 10 formulation, is well known in the art, some of which are briefly discussed below for general purposes of illustration. In certain applications, the pharmaceutical compositions disclosed herein may be delivered via oral administration to an animal. As such, these compositions may be formulated with an inert diluent or with an assimilable edible carrier, or they may be enclosed 15 in hard- or soft-shell gelatin capsule, or they may be compressed into tablets, or they may be incorporated directly with the food of the diet. In certain circumstances it will be desirable to deliver the pharmaceutical compositions disclosed herein subcutaneously, parenterally, intravenously, intramuscularly, or even intraperitoneally. Such approaches are well known to the skilled artisan, some of 20 which are further described, for example, in U.S. Patent No. 5,543,158; U.S. Patent No. 5,641,515 and U.S. Patent No. 5,399,363. In certain embodiments, solutions of the active compounds as free base or pharmacologically acceptable salts may be prepared in water suitably mixed with a surfactant, such as hydroxypropylcellulose. Dispersions may also be prepared in glycerol, liquid polyethylene glycols, and mixtures thereof and in oils. Under 25 ordinary conditions of storage and use, these preparations generally will contain a preservative to prevent the growth of microorganisms. Illustrative pharmaceutical forms suitable for injectable use include sterile aqueous solutions or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersions (for example, see U.S. Patent No. 5,466,468). In all 30 cases the form must be sterile and must be fluid to the extent that easy syringability exists. It must be stable under the conditions of manufacture and storage and must be preserved against the contaminating action of microorganisms, such as bacteria and fungi. The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (e.g., glycerol, propylene glycol, and liquid polyethylene glycol, and the like), suitable mixtures thereof, SEA 2079156vl 0081428-000011 84 WO 2008/031061 PCT/US2007/077923 and/or vegetable oils. Proper fluidity may be maintained, for example, by the use of a coating, such as lecithin, by the maintenance of the required particle size in the case of dispersion and/or by the use of surfactants. The prevention of the action of microorganisms can be facilitated by various antibacterial and antifungal agents, for example, parabens, 5 chlorobutanol, phenol, sorbic acid, thimerosal, and the like. In many cases, it will be preferable to include isotonic agents, for example, sugars or sodium chloride. Prolonged absorption of the injectable compositions can be brought about by the use in the compositions of agents delaying absorption, for example, aluminum monostearate and gelatin. In one embodiment, for parenteral administration in an aqueous solution, the 10 solution should be suitably buffered if necessary and the liquid diluent first rendered isotonic with sufficient saline or glucose. These particular aqueous solutions are especially suitable for intravenous, intramuscular, subcutaneous and intraperitoneal administration. In this connection, a sterile aqueous medium that can be employed will be known to those of skill in the art in light of the present disclosure. For example, one dosage may be dissolved in 1 ml 15 of isotonic NaC1 solution and either added to 1000 ml of hypodermoclysis fluid or injected at the proposed site of infusion, (see for example, Remington's Pharmaceutical Sciences, 15th ed., pp. 1035-1038 and 1570-1580). Some variation in dosage will necessarily occur depending on the condition of the subject being treated. Moreover, for human administration, preparations will of course preferably meet sterility, pyrogenicity, and the general safety and 20 purity standards as required by FDA Office of Biologics standards. In another embodiment of the invention, the compositions disclosed herein may be formulated in a neutral or salt form. Illustrative pharmaceutically-acceptable salts include the acid addition salts (formed with the free amino groups of the protein) and which are formed with inorganic acids such as, for example, hydrochloric or phosphoric acids, or 25 such organic acids as acetic, oxalic, tartaric, mandelic, and the like. Salts formed with the free carboxyl groups can also be derived from inorganic bases such as, for example, sodium, potassium, ammonium, calcium, or ferric hydroxides, and such organic bases as isopropylamine, trimethylamine, histidine, procaine and the like. Upon formulation, solutions will be administered in a manner compatible with the dosage formulation and in 30 such amount as is therapeutically effective. The carriers can further comprise any and all solvents, dispersion media, vehicles, coatings, diluents, antibacterial and antifungal agents, isotonic and absorption delaying agents, buffers, carrier solutions, suspensions, colloids, and the like. The use of such media and agents for pharmaceutical active substances is well known in the art. Except SEA 2079156v1 0081428-000011 85 WO 2008/031061 PCT/US2007/077923 insofar as any conventional media or agent is incompatible with the active ingredient, its use in the therapeutic compositions is contemplated. Supplementary active ingredients can also be incorporated into the compositions. The phrase "pharmaceutically-acceptable" refers to molecular entities and compositions that do not produce an allergic or similar untoward 5 reaction when administered to a human. In certain embodiments, liposomes, nanocapsules, microparticles, lipid particles, vesicles, and the like, are used for the introduction of the compositions of the present invention into suitable host cells/organisms. In particular, the compositions of the present invention may be formulated for delivery either encapsulated in a lipid particle, a 10 liposome, a vesicle, a nanosphere, or a nanoparticle or the like. Alternatively, compositions of the present invention can be bound, either covalently or non-covalently, to the surface of such carrier vehicles. The formation and use of liposome and liposome-like preparations as potential drug carriers is generally known to those of skill in the art (see for example, Lasic, Trends 15 Biotechnol. 16(7):307-21, 1998; Takakura, Nippon Rinsho 56(3):691-95, 1998; Chandran et al., Indian J. Exp. Biol. 35(8):801-09, 1997; Margalit, Crit. Rev. Ther. Drug Carrier Syst. 12(2-3):233-61, 1995; U.S. Patent No. 5,567,434; U.S. Patent No. 5,552,157; U.S. Patent No. 5,565,213; U.S. Patent No. 5,738,868 and U.S. Patent No. 5,795,587, each specifically incorporated herein by reference in its entirety). The use of liposomes does not appear to be 20 associated with autoimmune responses or unacceptable toxicity after systemic delivery. In certain embodiments, liposomes are formed from phospholipids that are dispersed in an aqueous medium and spontaneously form multilamellar concentric bilayer vesicles (also termed multilamellar vesicles (MLVs)). Alternatively, in other embodiments, the invention provides for 25 pharmaceutically-acceptable nanocapsule formulations of the compositions of the present invention. Nanocapsules can generally entrap compounds in a stable and reproducible way (see, for example, Quintanar-Guerrero et al., Drug Dev. Ind. Pharm. 24(12):1113-28, 1998). To avoid side effects due to intracellular polymeric overloading, such ultrafine particles (sized around 0.1 gim) may be designed using polymers able to be degraded in vivo. Such 30 particles can be made as described, for example, by Couvreur et al., Crit. Rev. Ther. Drug Carrier Syst. 5(1):1-20, 1988; zur Muhlen et al., Eur. J. Pharm. Biopharm. 45(2):149-55, 1998; Zambaux et al., J. Controlled Release 50(1-3):31-40, 1998; and U.S. Patent No. 5,145,684. SEA 2079156v1 0081428-000011 86 WO 2008/031061 PCT/US2007/077923 In addition, pharmaceutical compositions of the present invention may be placed within containers, along with packaging material that provides instructions regarding the use of such pharmaceutical compositions. Generally, such instructions will include a tangible expression describing the reagent concentration, as well as within certain 5 embodiments, relative amounts of excipient ingredients or diluents (e.g., water, saline or PBS) that may be necessary to reconstitute the pharmaceutical composition. The dose administered may range from 0.01 mg/kg to 100 mg/kg of body weight. As will be evident to one of skill in the art, the amount and frequency of administration will depend, of course, on such factors as the nature and severity of the 10 indication being treated, the desired response, the condition of the patient, and so forth. Typically, the compositions may be administered by a variety of techniques, as noted above. The invention also provides a diagnostic kit comprising at least one anti activin A binding agent according to the present invention. The binding agent may be an antibody. In addition, such a kit may optionally comprise one or more of the following: 15 (1) instructions for using the one or more binding agent(s) for screening, diagnosis, prognosis, therapeutic monitoring or any combination of these applications; (2) a labeled binding partner to the anti-activin A binding agent(s); (3) a solid phase (such as a reagent strip) upon which the anti-activin A 20 binding agent(s) is immobilized; and (4) a label or insert indicating regulatory approval for screening, diagnostic, prognostic or therapeutic use or any combination thereof. If no labeled binding partner to the binding agent(s) is provided, the binding agent(s) itself can be labeled with one or more of a detectable marker(s), e.g. a cheniluminescent, 25 enzymatic, fluorescent, or radioactive moiety. The following examples are offered by way of illustration, and not by way of limitation. EXAMPLES 30 EXAMPLE 1 RECOMBINANT EXPRESSION OF ACTIVIN A Ultra filtration and diafiltration (UF/DF) of conditioned media. R HuActivinA was expressed in chinese hamster ovary (CHO) cells. A series of steps was developed to generate active, purified material. The purification process began by SEA 2079156v 10081428-000011 87 WO 2008/031061 PCT/US2007/077923 concentrating (dialfiltration) the conditioned media (C.M.) between 15 to 20 fold using an Amicon SlOY10 spiral cartridge. The media was then buffer exchanged (diafiltered) using 5 volumes of 10mM tris buffer Ph 7.0, filtered and stored. Cation Exchange Chromatography. The r-HuActivin A was applied at 5 5 ml/minute at 4-80C to a 2.6 X 7 cm (Pharmacia) S-Sepharose Fast Flow column equilibrated inlO mM Tris buffer Ph 7.0. The column was washed with the equilibration buffer. The r HuActivin A was eluted from the column with a gradient of increasing sodium chloride concentration to 0.4M over 20 column volumes buffered with 10Mm Tris Ph 7.0. The appropriate fractions were pooled and stored 4-80C. 10 Reverse Phase HPLC C4 Chromatography. The S-Sepharose column pool pH was adjusted to 2.0 with trifluroacetic acid (TFA). The pool was then applied to a 1 X 25 cm Vydac C4 column at room temperature equilibrated with 75% A buffer (0.1% TFA in water), and 25% B buffer (90% acetonitrile, 0.1% TFA, 9.9% water). The column was then washed with the equilibration buffer. R-HuActivin A was eluted with a gradient of 25% B buffer to 15 50% B buffer over 50 minutes at a flow rate of 5 mn/minute. The appropriate fractions were pooled, and lyophylized. High Performance Cation Exchange Chromatography. A 5ml S Sepharose High Performance column was equilibrated with 8M urea, 10 mM sodium phosphate, Ph 7.0 (A buffer) at room temperature. The lyophylized C4 pool was resuspended in A buffer and 20 applied at 5 ml/minute, and washed with A buffer. The r-HuActivin A was eluted from the column with a gradient of increasing sodium chloride concentration to 0. 15M over 30 column volumes buffered with 8M urea, 10 mM sodium phosphate, pH 7.0. The appropriate fractions were pooled and stored 4-80 *C. Reverse Phase HPLC C4 Chrornatography. The S-Sepharose column pool pH 25 was adjusted to 2.0 with Trifluroacetic Acid (TFA). The pool was then applied to a 1 X 25 cm Vydac C4 column at room temperature equilibrated with 75% A buffer (0,1% TFA in water), and 25% B buffer (90% acetonitrile, 0.1% TFA, 9.9% water). The column was then washed extensively to remove urea and salts with the equilibration buffer. R-HuActivin A was eluted with a gradient of 25%B buffer to 50% B buffer over 50 minutes at a flow rate of 30 5 ml/minute. The appropriate fractions were pooled, and the final purified r-HuActivin A was lyophylized and stored in aliquots -80 "C. SEQ ID NO:225 provides the amino acid sequence for activin A. EXAMPLE 2 SEA 2079156v1 0081428-000011 88
WO 2008/031061 PCT/US2007/077923 GENERATION OF ANTI-ACTIvIN A HYBRIDOMAS Antibodies to activin A were raised in XenoMouse@ mice (Abgenix, Fremont, Calif.), which are mice containing human immunoglobulin genes. The XenoMouse@ strain 5 XMG2 was used to produce fully human IgG2 Kappa antibodies. A second strain was used to produce fully human IgG4 Kappa antibodies. Mice were immunized with activin A. The mice were injected with antigen (activin A) according to standard protocols (US 2005/0118643; WO 2005/694879) in the hind footpads (5 jig per footpad). Initial injections contained the adjuvant TiterMax@ Gold (Sigma, Cat # T2684). In 10 subsequent injections, each mouse was injected with a total of 5 pg of antigen in the adjuvant alum gel (aluminum phosphate gel adjuvant; Superfos Biosector a/s, distributed by E. M. Sargent Pulp and Chemical Co., Clifton N.J., cat # 1452-250). The final injection contained a total of 10 pig of antigen per mouse and did not contain an adjuvant. Each mouse was bled two days after the sixth injection. Blood samples from 15 those bleeds were assayed by ELISA to determine the titer of antibodies to activin A. Four days after the final injection, the mice were sacrificed and their draining lymph nodes were harvested and the lymphocytes were recovered. Lymphocytes from the mice of each of the three groups were separately pooled. To enrich the lymphocyte samples for B-cells, T-cells were depleted by adding anti-CD90 magnetic beads (Miltenyi Biotech cat. # 491-01) and then 20 passing the lymphocytes through an LS' column (Miltenyi Biotech cat. # 424-01). Each of the samples of B-cell enriched lymphocytes was then fused with P3 myeloma cells using an electrocell fusion device (Genetronic, Inc., Model ECM 2001) to create hybridornas. The three groups of fused hybridoma lines were then plated in 96-well plates hybridoma media as described (WO 2005/094879) although other suitable media 25 known in the art can be used. The hybridoma lines were cultured for 14 days at 37'C, in 15%
CO
2 . After 14 days, culture supernatants were assayed by ELISA to detect the presence of human IgG antibodies to activin A. Culture supernatants that tested positive in that ELISA were tested for the presence of human kappa chain in a second ELISA. In that 30 second ELISA, the conditions were identical to the first ELISA, except that the secondary antibody was a goat anti-human kappa chain antibody conjugated to horseradish peroxidase. Hybridomas that tested positive in both ELISA assays were further expanded to produce 5 nl of supernatant for subsequent testing. A total of 160 anti-activin A hybridoma samples derived from the xeno mice SEA 20791562 0081428-000011 89 WO 2008/031061 PCT/US2007/077923 were screened using a cell-based functional assay and BIAcore binding analysis as described in the Examples below. Twenty-three hybridomas were further characterized for their properties related to expression, purification, cell-based assay, binding analysis, sequence analysis, MS, and SEC. From these, three potent Mabs, Al, A2, and A3, were identified for 5 further testing as described below. The amino acid sequences for these antibodies are as follows: Al: SEQ ID NO:9 (light chain variable); SEQ ID NO:84 (light chain constant); SEQ ID NO:10 (heavy chain variable); and SEQ ID NO:214 (heavy chain constant). A2: SEQ ID NO:25 (light chain variable); SEQ ID NO:100 (light chain constant); SEQ ID NO:26 (heavy chain variable); and SEQ ID NO:215 (heavy chain constant). A3: SEQ ID NO:41 (light 10 chain variable); SEQ ID NO: 108 (light chain constant); SEQ ID NO:42 (heavy chain variable); and SEQ ID NO:221 (heavy chain constant). EXAMPLE 3 EXPRESSION AND PURIFICATION OF HUMAN ANTI-HUACTIVIN A ANTIBODIES IN CHO CELLS 15 CS-9 cells used for transfection of the anti-huActivin A expression plasmids were a serum-free suspension CHO cell line. The CS-9 clone was selected as the host cell line for expression of recombinant proteins and banked in serum-free medium, The bank was tested for adventious agents and sterility and found to be free of viral, mycoplasma and 20 microbial agents. Anti-hu Activin A expressing cell lines were scaled up using a typical fed batch process. Cells were inoculated into a Wave bioreactor upon expansion. Culture was fed three times on approximately day 3, day 5 and day 9 with bolus feeds and harvested on day 11. Cells were spun down and conditioned media was filtered through a ten inch 0.45/0.2 25 micron pre filter, followed by a filtration through a six inch 0.2 micron filter. Purification of Mab's from hybridoma conditioned media (C.M.): To between 7 to 10 ml of C.M.'s was added 100 pl of a 1:2 slurry of Mab 30 Select resin equilibrated in PBS. The tubes were placed on rotators at 4-80C overnight. The tubes were centrifuged at 1,000 X g for 5 minutes and the non-bound fraction was decanted. The resin was washed with 5nl of PBS, and centrifuged and decanted as above. The resin was then transferred to a SPIN-X, 0.45um, 2ml tube. The resin was washed an additional two times with 0.5rnl of PBS and centrifuged. The Mab's were eluted with 0.21l of 0.1M acetic SEA 2079156vl 0081428-000011 90 WO 2008/031061 PCT/US2007/077923 acid by incubating at room temperature with occasional mixing for 10 minutes. The tubes were centrifuged, and 30ul of 1M Tris buffer Ph 8.0 is added to the eluate. Purified Mab's were stored 4-80C. 5 EXAMPLE 4 C2C12 CELL BASED ACTIVIN ACTIVITY ASSAY This assay demonstrates the activin A neutralizing capability of the antibody being tested by measuring the extent that binding of activin A to its receptor is inhibited. An activin-responsive reporter cell line was generated by transfection of C2C12 myoblast cells 10 (ATCC No: CRL-1772) with a pMARE-luc construct. The pMARE-luc construct was made by cloning twelve repeats of the CAGA sequence, representing the activin response elements (Dennler et al. EMBO 17: 3091-3100 (1998)) into a pLuc-MCS reporter vector (Stratagene cat # 219087) upstream of the TATA box. The myoblast C2C12 cells naturally express activin IB receptors (actRIIB) on the cell surface. When activin binds the cell receptors, the 15 Smad pathway is activated, and phosphorylated Smad binds to the response element (Macias Silva et al. Cell 87:1215 (1996)), resulting in the expression of the luciferase gene. Luciferase activity is then measured using a commercial luciferase reporter assay kit (cat # E4550, Promega, Madison, WI) according to manufacturer's protocol. A stable line of C2C12 cells that had been transfected with pMARE-luc 20 (C2C12/pMARE clone #44) was used to measure activin activity according to the following procedure. Equal numbers of the reporter cells (C2C12/pMARE clone #44) were plated into 96 well cultures. A first round screening using two dilutions of condition medium which contains antibodies was performed with the activin A concentration fixed at 4 nM. 25 Recombinant mature activin A was pre-incubated for 1 hour at room temperature with condition medium at 2 x and 5 x dilutions respectively. The reporter cell culture was treated with activin with or without antibodies for six hours. Activin A activity was measured by determining the luciferase activity in the treated cultures. This assay was used to initially identify antibodies that inhibited the activin A signaling activity in the reporter assay. 30 Subsequently, a nine point titration curve was generated with the activin A concentration fixed at 4 nM. The activin A was preincubated with each of the following nine concentrations of purified antibodies: 0.004 nM, 0.04 nM, 0.4 nM, 4 nM, 20 nM, 40 nM, 20() nM, 400 nM and 2 ltM for one hour before adding the mixture to the reporter cell culture. The IC 50 values were for a number of antibodies A1, A2 and A3 are provided in Table 3. SEA 2079156v 10081428-000011 91 WO 2008/031061 PCT/US2007/077923 Table 3 MAb Cell ICso (nM) Al <3 A2 <3 A3 <3 EXAMPLE 5 BIAcORE@ ASSAY 5 An affinity analysis of activin A antibodies Al, A2 and A3 was performed on a BlAcore@3000 (Biacore, Inc., Piscataway, NJ), apparatus using sensor chip CM5, and 0.005 percent P20 surfactant (Biacore, Inc.) as running buffer. Recombinant mature activin A protein was immobilized to a research grade CM5 sensor chip (Biacore, Inc.) via primary amine groups using the Amine Coupling Kit (Biacore, Inc.) according to the manufacturer's 10 suggested protocol. Direct binding assays were used to screen antibodies in order of their ability to bind to immobilized activin A. Binding assays were carried by injection of two concentrations (40 and 400 nM) of each candidate antibody to the immobilized activin A surface at a flow rate of 50 p1/min for 3 minutes. After a dissociation time of 3 minutes, the 15 surface was regenerated. Binding curves were compared qualitatively for binding signal intensity, as well as for dissociation rates. Antibody binding kinetic parameters including ka (association rate constant), kd (dissociation rate constant) and KD (dissociation equilibrium constant) were determined using the BIA evaluation 3.1 computer program (Biacore, Inc.). The lower the dissociation equilibrium constants (expressed in nM), the greater the affinity of 20 the antibody for activin A. EXAMPLE 6 ACTIVIN A BINDING REGION MAPPING FORMONOCLONAL ANTIBODIES Antibody binding regions on activin A were determined using multiple 25 biochemical methods, including western under reducing or non-reducing conditions, limited protease digestion using LysC, peptide analysis by MS, and peptide competition using BlAcore. Cys-knots are key structural characteristics for TGF-p family members. Breaking S-S with reducing agent deteriorated activin A structure and decreased activin A SEA 2079156vl 0081428-000011 92 WO 2008/031061 PCT/US2007/077923 binding to the neutralizing antibodies, including A-1. This data demonstrated that Cys-knots are important for activin A binding with these neutralizing antibodies that bind specifically to activin A compared to activin B. Cys-knots make two distant loops of sequences structurally adjacent to each other. These two regions are a sequence in the region of approximately C1. I 5 S33 (first loop) and approximately C81-E 111 (second loop) activin A (Figure 7). A limited LysC digestion revealed that these two regions were protected by antibody A-1, indicating they interact with the neutralizing antibodies directly. The neutralizing antibodies are sensitive to conformational changes of activin A, suggesting they bind to non-linear epitopes of the antigen. Further peptide analysis indicated that fragments G-1 to K7 and S57-F74 in 10 activin A are not required for its binding with the neutralizing antibodies directly. A comparison of the sequence of activin A compared to activin B shows that some of the sequence differences occur in this region. EXAMPLE 7 15 SELECTIVITY ASSAYS These assays were performed using BlAcore@ technology, to determine the selectivity of binding of antibodies A1, A2 and A3 to various activins and other TGF-8 family members, including activin A, activin B, activin AB, inhibin A, GDF-8, GDF-11, TGF-B-1, TGF-B-3, and BMP4 (all fiom R & D Systems). ActRIIB/Fc was covalently 20 coupled to research grade sensor chips according to manufacturer's suggested protocol. Because BlAcore assays detect changes in the refractive index, the difference between the response detected with injection over the immobilized receptor surfaces compared with the response detected with injection over the control surface in the absence of any antibody represents the actual binding of the various ligands to the receptor. With pre-incubation of 25 antibodies and activin and TGF-$ molecules, a change (increase or decrease) in binding response indicates antibody binding to the TGF3 family of molecules. The antibodies all bound to activin A but not to activin B, GDF-8, GDF-11, TGF-B-1, TGF-B-3, and BMP4, thus indicating specificity for activin A. 30 EXAMPLE 8 KINEx ATM EQUILIBRIUM ASSAYS Solution-based equilibrium-binding assays using KinExATM technology (Sapidyne Instruments, Inc.) were used to determine the dissociation equilibrium (KD) of activin A binding to antibody molecules. This solution-based assay is considered to be more SEA 2079156v 10081428-000011 93 WO 2008/031061 PCT/US2007/077923 sensitive than the BlAcore assay in some instances. Reacti-GelTM 6X was pre-coated with about 50 pg/ml activin A overnight, and then blocked with BSA. 30pM and 100pM of antibody samples were incubated with various concentrations (0.5 pM to 5 nM) of activin A in sample buffer at room temperature for 8 hours before being run through the activin A 5 coated beads. The amount of the bead-bound antibody was quantified by fluorescent (Cy5) labeled goat anti-human-Fc antibody at I mg/mil in superblock. The binding signal was proportional to the concentration of free antibody at equilibrium with a given activin A concentration. KD was obtained from the nonlinear regression of the competition curves using a dual-curve one-site homogeneous binding model provided in the KinEx AT software 10 (Sapidyne Instruments, Inc.). The results are shown in Figure 8. Al shows the strongest binding affinity for activin A (KD-3 pM). A2 and A3 bound to activin A at ~15 pM and -8 pM, respectively. 15 EXAMPLE 9 PROTECTIVE EFFECTS OF ANTI-ACTIVIN ON BODY WEIGHT AND MUSCLE MASS LOSS IN COLLAGEN-INDUCED ARTHRITIS MODEL This example was designed to test if activin inhibitors can rescue muscle wasting condition observed in collagen-induced arthritis. Collagen-induced arthritis (CIA) is 20 a widely used mouse model sharing several clinical and pathological features with rheumatoid arthritis (RA). The precise mechanisms for CIA is not known, however, there is considerable evidence to suggest that CIA is a Th-1 mediated inflammatory disease. Rheumatoid arthritis is a common autoimmune disease that leads to joint inflammation, and progressive cartilage/ bone erosion. Even if the RA progression is under control, loss of 25 BCM is not corrected without additional, direct intervention. The collagen-induced arthritis model was prepared as follows. DBA/lJ male mice (The Jackson Laboratory, Bar Harbor, ME), 8 weeks of age (20-23g), were used. Immunization was carried out on day 1 and day 21 by injecting 1O00g Bovine Collagen II (Chondrex, Redmond, WA) emulsified in 1OI1 of CFA or ICFA, intradermally at the base of 30 the tail. Three groups of ten mice each were used. Group 1 (control) received vehicle only. Group 2 (experimental, collagen injection) received vehicle only as treatment. Group 3 was injected with collagen and treated with anti-Activin A antibody Al. The arthritic clinical index used was: 0=normal joint no signs of arthritis SEA 2079156vl 0081428-000011 94 WO 2008/031061 PCT/US2007/077923 Serum activin A levels in mice were measured on day 12 post xenograft implantation. The levels of serum activin A in parental CHO implanted control mice were < 2 ng/ml. In contrast, the mice bearing CHO/Activin xenograft showed dramatically elevated serum activin A. There was a significant correlation between the serum activin A level and 5 the severity of body weight loss as indicated by the statistical analysis, indicating that activin A overexpression is responsible for the body weight loss seen in CHO/Activin xenograft mice. Mice (n=14 per group) were implanted with CHO/Activin xenograft and subsequently injected with either vehicle or each of the three anti-activin A monoclonal 10 antibody, A1, A2 and A3. Twelve out of fourteen of the mice in the vehicle group died by day 25 post CHO/Activin implantation, while only one of forty-two CHO/Activin implanted mice in the anti-activin A Mab treatment groups died at the time. By day 38, the majority of mice in the Mab treatment groups continued to survive well, with survival rates as follows: thirteen out of fourteen for A l group and ten out of fourteen for either A2 or A3 group. 15 Body weight data show that treatment with anti-activin A Mab, Al or A2, completely prevented the body weight loss in CHO/Activin xenograft-bearing mice, indicating that the anti-activin A Mabs were effective in neutralizing activin A activity in vivo. As shown in Figure 3, NMR data revealed that treatment with anti-activin A Mab, Al prevented the progressive loss of lean body mass seen in CHO/Activin-bearing mice. 20 Treatment with this antibody also caused an increase in food intake. Necropsy data indicate that treatment with anti-activin A Mab, Al and A2, prevented the severe reduction in lean carcass weights seen in CHO/Activin-bearing mice (Table 5). Terminal necropsy data indicate that treatment with anti-activin A Mab, Al and A2, prevented the severe reduction in fat mass seen in CHO/Activin-xenograft bearing mice 25 (Table 5). The percentage of animals bearing a visible tumor at the xenograft site was analyzed during terminal necropsy on day 12 post CHO/Activin implantation. As shown in Table 5, data revealed that 80% of the mice in the vehicle group developed visually identifiable xenograft tumors at the injection site. A significantly decreased rate of visible 30 tumor formation in the anti-activin A Mab treatment groups was observed. Upon necropsy, all the visually identifiable tumors at the CHO/Activin xenograft sites were dissected from the animals and weighed. A significant decrease in tumor mass was observed in the activin A Mab treatment group compared to vehicle group (Table 5). SEA 2079156v l0081428-000011 96 WO 2008/031061 PCT/US2007/077923 Table 5 Treatment Lean carcass mass Periuterine fat Tumor xenograft Tumor weight (g) (g) on day 12 tissue (g) on development, on day 12 day 12 percent of animals, on day 12 Nude mice 9 ± 0.25 0.18±0.02 Not applicable Not applicable plus vehicle CHO/Activin 7.5±0.25 0.10±0.02 80% 0.11±.01 plus vehicle CHO/Activin 9.2±0.25 0.17±0.04 20% 0.01±0.005 plus A-I antibody CHO/Activin 8.9±0.25 0..16±0.03 50% 0.01±0.005 plus A-2 antibody The foregoing experiments on xenograft tumor development led to several 5 conclusions regarding the use of anti-activin A antibodies to improve survival from cancer. Activin A played a causal role in the development of cachexia syndrome in nude mice bearing CHO/Activin xenograft. The loss of body weight correlated well with the increase in serum activin level in this model. Anti-activin A Mabs prevented the body weight loss and cachexia syndrome seen in CHO/Activin xenograft tumor-bearing mice. Anti-activin A 10 Mabs suppressed xenograft growth, thereby significantly reducing the percentage of mice bearing visible xenograft tumors as well as decreasing the xenograft tumor sizes. Anti activin A Mabs prevented the death resulting from CHO/Activin exograft, markedly promoting animal survival. 15 EXAMPLE 11 ANTI-ACTIVIN MONOCLONAL ANTIBODY A l IN AAV-ACTIVIN MICE Postnatal overexpression of activin A led to severe cachexia-like wasting 20 syndrome in C57Bl/6 mice. The body weight decreased over day 1, 4, 9 and 11, going from 16 grams to 14, 12.5, and finally 10.5 grams at day 11. There was also a loss of fat weight, lean carcass weight, and gastrocnemeus muscle weight. To determine whether antibody directed to activin A could alleviate or prevent the effects of activin A, the following experiments were performed. AAV-Activin or empty 25 AAV vector (control) were injected at 1 x 1013 pfuh/mouse into 8 week old male C57B1/6 mice SEA 2079156v 0081428-000011 97 WO 2008/031061 PCT/US2007/077923 (n=10-12) via the tail veins. Figure 5 shows the effect of anti-Activin A monoclonal antibody Al on body weight change in the transduced mice at days 1, 5, 8 and 12. The antibody prevented the body weight change observed in the control mice. Antibody treatment improved food intake in this animal model. 5 EXAMPLE 12 PROTECTIVE EFFECT OF ANI-ACTIVIN-A MAB Al AGAINST BODY WEIGHT AND LEAN MASS LOSSES IN COLON-26 CANCER CACHEXIA MODEL 10 This example demonstrates the muscle preserving effect of the anti-Activin-A monoclonal antibody A-1 in a murine cancer cachexia model. The model of cancer cachexia was established by using the syngenic murine colon 26 adenocarcinoma cells inoculation in 8.5 weeks old male CDF1 mice (0.5 x 106 cells/mouse) on day 0. The anti-Activin-A MAb 15 A-1 treatment (10 mg/kg, sc) was initiated on day 4 and was given 3 times weekly for 18 days. Sodium acetate buffer (10 nm sodium acetate, 5% sucrose, pH 5.0) as vehicle was used in the tumor-bearing control group mice. One group of age and weight matched normal CDF1 mice without tumors was used as parallel baseline control. Body weight and food intake were monitored three times weekly. Tumor size was measured three times per week 20 by digital calipers. Body composition was measured using NMR at the beginning and the end of the study to monitor changes in lean and fat mass. At the end of the experiment, the mice were euthanized in a CO 2 chamber. Terminal block samples were collected and serum Activin-A levels were analyzed by ELISA. The lean carcass were weighed and recorded, and the gastrocnemius muscles and tumors were weighed and properly saved. 25 All results were expressed as mean ± standard error of the mean (SEM). Non paired T-test was performed to determine statistical difference between groups by using the Graph Pad Prizm software. Statistical significance from vehicle was represented by p values less than 0.05. The data show that A- 1 treated mice had significantly higher body weight than 30 vehicle treated mice (21.30 ± 0.54 g vs. 19.21 ± 0.38 g, P<0.05, Day 15 and 19.66 ± 0.22 g vs. 18.11 ± 0.19 g, P<0.05, day 18). There was a significant body weight loss in tumor bearing mice treated with vehicle compared to age-matched non-tumor-bearing mice (25.48 0.35 g vs. 18.11 ± 0.19 g, p<0.005). Thus, the activin A antibody treatment helped to maintain body weight. SEA 2079156vi 0081428-000011 98 WO 2008/031061 PCT/US2007/077923 Tumor growth was monitored with a digitized calipers measurement and tumor size was calculated with the equation of: Tumor dimension (mm 3 = L (mm) * W (mrn) * W (mm) * 0.5. The tumor size was not different between the antibody Al treated and vehicle treated two groups. 5 After C-26 tumor cell inoculation, the mice in vehicle treated group had a dramatic body weight loss compared to non tumor-bearing mice (25.48 ± 0.35 g vs. 18.11 0.19 g, p<0.01). However, A-I treatment attenuated the average weight loss (19.66 ± 0.22 g vs. 18.11 ± 0.19g, P<0.05). A- 1 treatment resulted in a significant preservation of the skeletal muscle 10 mass. A-I treated mice had greater weight of the gastrocnemius muscle mass (0.099 ± 0.002 g vs. 0.093 ± 0.001, p<0.0 5 ) than that in the C26 vehicle treated group. At the end of the experiment, the terminal tissue dissection was performed. The control C-26 tumor-bearing mice had significantly lower lean carcass weight (6.75 ± 0.11 g) than that of the antibody Al treated mice (7.20 ± 0.16 g, p<0.05 vs. C-26 + vehicle 15 group). The lean body mass was markedly lost in C-26 vehicle treated group (-1.85 0.24 g compared to their initial body lean mass). Treatment with A-I in C-26 tumor-bearing mice significantly attenuated the loss of lean body mass (-0.60 ± 0.26 g, p<0.05 vs. C26 vehicle group). 20 Anti-Activin A monoclonal antibody Al treatment is effective in attenuation of cancer cachexia induced whole body weight lose. The protective effect of antibody Al is associated with preserving skeletal muscle mass, lean carcass mass and total lean body mass in a well-established murine cancer cachexia animal model. The present study provides preclinical evidence that neutralization of active A 25 using monoclonal antibody Al significantly attenuated body weight loss and preserved skeletal muscle and lean body mass. EXAMPLE 13 ACTIVIN A ELISA 30 Antibodies to activin A can be used to assay and quantitate activin A in samples, such as biological samples. Recombinant human activin A (100 ng/ml, cat #10 85106) and assay diluting buffer (0 mg/ml, cat #10-8510 1) were purchased from DSLabs SEA 2079156v1 0081428-000011 99 WO 2008/031061 PCT/US2007/077923 (Webster, Texas) and stored at 4'C. Standards were prepared fresh before the experiment by diluting into assay buffer. Human sera were obtained from Bioreclarnation Inc. (Hicksville, NY). Sera for activin A measurement were aliquoted in 110 pil to minimize variation due to freeze-thaw. 5 The samples were diluted 1/3 with assay buffer and measured in the ELISA. Activin A ELISA (one-step ELISA) is performed using the following steps: Corning Costar 3590 96-well plats were coated with 100 pl of 4 ptg/mL anti activin A Mab (A2) overnight at room temperature while gently shaking at 500-600 rpm. The wells (400 Uwell) were washed three times with PBS containing 0.02% (v/v) Tween 10 20. The wells were blocked in 300 pl of I-blocking buffer for two hours at room temperature, then blocking buffer was removed. 100 ptl of standard activin A / or 100 pl of diluted samples were added, and 25 pd of 0.5 pg/mL anti-activin A mAb-HRP labelled (A1/HRP) was added in assay buffer. For free activin A measurements, sera were diluted in 1/3 with assay buffer. For total activin A 15 measurements, sera were (1) acidified (pH 4-5) with 20% HCL (2 pl per 110 pl sera), (2) incubated for 15 minutes at room temperature, (3) neutralized by adding 2 ld of 5 N NaOH (2 p1 per 110 pl sera), and (4) diluted in 1/3 with assay buffer. Incubation was carried out for 2 hours at room temperature while shaking at 600-700 rpm. The wells (400 pl/well) were washed three times with PBS containing 0.02% 20 (v/v) Tween-20. 100 pl of TMB (R&D System, Minneapolis, MN) was added, followed by an incubation for twenty minutes at room temperature. 50 pl of stop solution (R&D System, Minneapolis, MN) was added. OD measurement was performed using 450 nm in Molecular Device SpectraMax M5. A standard curve was generated by plotting absorbance at 450 nrn vs. the log 25 of the rh-activin concentration, by using a log-log (or a five-parameter logistic) curve-fitting program of Molecular Device. Values for sample concentrations were obtained by interpolation of their absorbance from the standard. The Capturing Antibody was A-3 anti-activin A mAb, 20.78 mg/ml. The Detection Antibody was A-I anti-activin A mAb-HRP, 0.65 HRP/Ab, 12.05 mg/ml. The 30 Blocking Buffer was I-blocking buffer. The wash buffer was PBS / 0.1% Tween-20. The assay buffer (Reagent Diluent) was 0 mg/ml activin A buffer. EXAMPLE 14 ACTIVIN A PROTEASE PROTECTION ANALYSIS SEA 2079156v1 0081428-000011 100 Protease protection assays were conducted in order to identify epitope binding of activin A antibodies. Recombinant human activin A degraded preparation was analyzed by three methods. The first method examined an activin A preparation that had been degraded during purification. The second method included proteolysis of the activin A 5 preparation with Lysine C, chymotrypsin, pepsin and thermolysin. The third method included chemical degradation of the preparation using cyanogen bromide. Thus, for the proteolysis of human activin and antibody complex, 5 micrograms of activin A and 90 micrograms of antibody were mixed in 100 microliters of 0.1 M ammonium bicarbonate (pH 7.8) and kept at room temperature for approximately 20 ) minutes before treatment with 2% by weight of the particular selected protease. Digestion of the protein was allowed to proceed at 37 degrees Celsius for 90 minutes. Control samples containing activin A alone or antibody alone were carried out in an identical fashion. The samples were acidified prior to RP-HPLC analysis. For the cyanogen bromide digestion of activin A, CNBr fragments of activin A were generated by incubating 10 micrograms of the protein with CNBr in 100 mincroliters of 90% TFA overnight at room temperature. The sample was kept in the dark throughout the incubation and was dried in a vacuum prior to RP-HPLC analysis. The RP-HPLC was utilized to analyze the fragments generated as described above. Briefly, the column was equilibrated with solvent, the sample was injected and the column was washed with solvent before a linear gradient was applied. Column effluent was monitored by absorbance at 215 nm. The eluted samples were manually collected and analyzed by Edman degradation and mass spectrometry. The preparation that had been degraded during purification contained the following species: 5 1. Gly'-His 9 (6,456.2 Da) 2. Ser 60_Tyr 9 4 (4,102.9 Da) 3. Asp 95 -Ser"1 6 (2,452.8 Da) 4. Gly'-Tyr 94 (10,541.1 Da) The preparation that had been degraded by a chymotryptic-like activity had the following species cleaved at the locations indicated in SEQ ID NO: 225: 1. 1 GLECDGKVNICCKKQFFVSFKDIGWNDW 30 (SEQ ID NO:262) 2. 31 APSGYHANYCEGECPSHIAGTSGSSLSFH S 60 (SEQ ID NO:263) 3. 61 TVINHYRMRGHSPFANLKSCCVPTKLRPMSo (SEQ ID NO:264) 4. 9 1MLYYjDDGQNIIKKDIQNMIVEECGCSii 6 (SEQ ID NO:265) 101 WO 2008/031061 PCT/US2007/077923 The species set forth in Figure 9 indicate the locations of cleavage sites when the activin A preparation was degraded by chymotrypsin, Lysine C (LysC), or Cyanogen Bromide (CNBr). 5 EXAMPLE 15 ACTIVIN A BINDING ASSAY Monoclonal antibodies Al, A2, and A3 bind to activin A but not activin B, according to the binding affinities listed in Table 6. Thus, an affinity analysis of activin A 10 antibodies Al, A2, and A3 was performed in order to determine the region or structure needed for neutralizing antibody binding. Several activin A binding proteins are known, including ActRII (A/B), ActRI (A/B)(Alt4), follistatin, and follistatin related gene (FLRG). Binding assays were conducted to screen antibodies in order to assess their ability to bind to immobilized antibody surfaces. (activin A and/or activin B). Binding assays 15 were performed utilizing 2 nM rhActivin A and 20 nM of each antibody immobilized on a surface. The following antibodies were immobilized on a surface and tested: AKA 1 (commercially available), AKA2 (commercially available), Al, and A3. Results of the antibody assay are indicated in Figure 10. Anti-Activin A2 A3 Al AKAl AKA2 A Ab ActivinA KD-25pM KD~11pM KD-3pM KD-4pM K -4pM Activin B - -- - 20 EXAMPLE 16 ACTIVIN A BINDING ASSAY REGION MAPPING (BIACORE) Blocking assays were conducted on immobilized recombinant human activin RIB-Fc chimera surfaces, recombinant human activin RIIB-Fc chimera surfaces, and 25 recombinant human RIIA-Fc chimera recombinant surfaces, as described in Example 5. Monoclonal antibodies A1, A2, AKA 1, and AKA2 on each chimera surface were incubated with InM activin A, and the relative binding response (%) was measured. An increased binding response in the presence of antibodies indicates that activin A is able to bind to the immobilized receptor surfaces and the antibodies in solution simultaneously, which is SEA 2079156vl 0081428-000011 102 WO 2008/031061 PCT/US2007/077923 referred to as "carry on". Results are indicated in Table 7 and Figure 11, where EC50 means the effective concentration that yields 50% binding. TABLE7 EC50 (nM) rhActivin RIB/Fc rhActivin RIIB/Fc rhActivin FIIA/Fc Chimera Chimera Chimera AKA1 Partially block 0.30 0.35 AKA2 Partially block 0.36 0.37 Al 0.29 0.29 0.29 A2 0.18 Carry on Carry on 5 EXAMPLE 17 ACTIVIN A/B CHIMERAS Activin A/B chimeras were generated in order to further assess the epitope binding abilities of monoclonal antibodies Al, A2, and A3, as described in Examples 5 and 10 16. As indicated in Figure 12, two chimeras were tested: Activin A 13/39 B (containing amino acids 1-116 of activin A except that amino acids at positions 13-39 of activin A are substituted with the corresponding amino acids at positions 13-39 from activin B-SEQ ID NO: 243), and activin A 82/107 B (containing amino acids 1-116 of activin A except that amino acids at positions 82-107 of activin A are substituted with the corresponding amino 15 acids at positions 82-107 from activin B-SEQ ID NO: 244). Briefly, a full length activin A clone was used as a template for amplification by PCR using Pfu ultra polymerase (Stratagene) and primers (SEQ ID NO: 245 and SEQ ID NO: 246) at the start of the mature protein sequence. The resulting PCR product was column purified (Qiagen), digested with SalI and XbaI restriction enzymes (Roche) and gel isolated 20 (Qiagen). The synthetic gene cassettes containing the modified mature protein sequences were designed by utilizing the amino acid sequences from full length activin A and activin B and back translating into DNA sequences codon optimized for expression in a mammalian host cell by using the Gene Designer program (Version 1.0.4, DNA 2.0, Inc.) (BMC Bioinformatics, 7: 285 (2006)). The sequences were digested with Xbal and NotI and gel 25 isolated. The activin A PCR product was ligated under standard reaction conditions using T4 DNA ligase (New England Biolabs, Inc.) with either the 13-39 synthetic gene fragment (SEQ ID NO: 247) or the 82-107 synthetic gene fragment (SEQ ID NO: 213) and a SalI/NotI SEA 2079156vl 0081428-000011 103 digested expression vector (pDRSalpha 24) to produce full length expression constructs. The synthetic gene construct of activin A with amino acids 13-39 replaced with activin B sequence (SEQ ID NO: 247) and the synthetic gene construct of acivin A with amino acids 82-107 replaced with activin B sequence (SEQ ID NO: 248) were then utilized in the epitope mapping experiments (results shown in Figure 14). From the foregoing, although specific embodiments of the invention have been described herein for purposes of illustration, various modifications may be made without deviating from the spirit and scope of the invention. Accordingly, the invention is not limited except as by the appended claims. All publications, published patent applications, and patent documents disclosed herein are hereby incorporated by reference. The reference in this specification to any prior publication (or information derived from it), or to any matter which is known, is not, and should not be taken as an acknowledgment or admission or any form of suggestion that that prior publication (or information derived from it) or known matter forms part of the common general knowledge in the field of endeavour to which this specification relates. Throughout this specification and the claims which follow, unless the context requires otherwise, the word "comprise", and variations such as "comprises" and "comprising", will be understood to imply the inclusion of a stated integer or step or group of integers or steps but not the exclusion of any other integer or step or group of integers or steps. 104

Claims (26)

  1. 2. The isolated antigen binding protein of claim 1, comprising an amino acid sequence selected from the group consisting of: a. a light chain CDR1 sequence that differs by no more than a total of three 5 amino acid additions, substitutions, and/or deletions from a CDR1 sequence of L1-L14 of SEQ ID NO:11, 27, 43, 59, 75, 91, 107, 155, 171, 203, and 219; b. a light chain CDR2 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR2 sequence of L1-L14 of SEQ ID NO: 12, 28, 44, 60, 76, 156, 172, 204, and 220; .0 c. a light chain CDR3 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR3 sequence of L1-L14 of SEQ ID NO:13, 29, 45, 61, 77, 93, 109, 125, 141, 157, 173, 189, and 205; d. a heavy chain CDR1 sequence that differs by no more than a total of two amino acid additions, substitutions, and/or deletions from a CDR1 sequence of H1-H14 of 25 SEQ ID NO: 14, 30, 46, 62, 78, 94, 110, 126, 158, 174, 190, 206, and 222; e. a heavy chain CDR2 sequence that differs by no more than a total of three amino acid additions, substitutions, and/or deletions from a CDR2 sequence of H1-H14 of SEQ ID NO:15, 31, 47, 63, 79, 95, 111, 127, 159, 175, 207, and 223; and f. a heavy chain CDR3 sequence that differs by no more than a total of two 30 amino acid additions, substitutions, and/or deletions from a CDR3 sequence of H1-H14 of SEQ ID NO: 16, 22, 32, 48, 64, 80, 96, 112, 144, 160, 176, 192, 208, and 244.
  2. 3. The isolated antigen binding protein of claim 1, comprising a sequence selected from the group consisting of: SEA 2079156vl 0081428-000011 107 a. a light chain CDR1 sequence selected from the group consisting of: i. (R/K)SSQS(L/I)L(H/Y)S(T/S)(G/N)(Y/N)(N/K)(-/K)YL(D/V); ii. RA(S/G)QGI(S/R)N(D/N)L(V/G); iii. RASQSISNYLNT; and 5 iv. SG(D/E)K(L/W)G(D/E)K(F/Y)(A/V)(F/C); b. a light chain CDR2 sequence selected from the group consisting of: i. (H/Q/L)D(T/N/S)KRPS; and ii. X 40 X 4 1 S X 42 X 43 X44 S, wherein X 40 is an alanine residue, a tryptophan residue, or a leucine residue, 0 X 41 is a threonine residue, an alanine residue, or a glycine residue, X 42 is a serine residue, a methionine residue, or a phenylalanine residue, X 43 is a leucine residue or an arginine residue, X 44 is a glutamine residue, a glutamate residue, or an alanine residue, 5 c. a heavy chain CDR1 sequence selected from the group consisting of: i. GGS(I/F)(N/S)(S/A)(-/G)(-/G)(F/Y)YWS; ii. G X 27 X 28 F X 29 X 30 Y X 3 1 X 32 X 33 , wherein X 27 is a tyrosine residue or a phenylalanine residue, X 28 is a threonine residue or a serine residue, O0 X 29 is a threonine residue,a serine residue, or an isoleucine residue, X 3 o is a glycine residue or a serine residue, X 31 is a tyrosine residue, a glycine residue, or a tryptophan residue, X 32 is an isoleucine residue or a methionine residue, X 33 is a histidine residue or a glycine residue; and 25 iii. G(Y/F)TF(T/S)(S/A)Y(G/W)(L/M/I)(S/H); d. a heavy chain CDR2 sequence selected from the group consisting of: i. (Y/E)I(S/Y/N)(Y/H)SG(S/G)T(Y/N)YNPSLK(S/R); ii. (V/N)I(K/W)(Y/Q)DGS(N/E/T)(K/E)Y(H/Y)(A/V)DSVKG; and iii. X 60 I X 6 1 X 62 X 63 X64 X 65 X 6 6 T X 6 7 X 68 X 69 X 70 X 7 1 X 7 2 Q G 30 X 60 is a tryptophan residue or an isoleucine residue, X 61 is an asparagine residue, an isoleucine residue, a serine residue, or a tyrosine residue, X 62 is a proline residue or an alanine residue, X 63 is an asparagine residue, a tyrosine residue, or a glycine residue, SEA 2079156vl 0081428-000011 108 X 64 is a serine residue, an asparagine residue, or an aspartate residue, X 6 5 is a glycine residue or a serine residue, X 6 6 is a glycine residue, an asparagine residue, or an aspartate residue, X 67 is an asparagine residue or an arginine residue, 5 X 68 is a tyrosine residue or a serine residue, X 69 is an alanine residue or a serine residue X 70 is a glutamine residue or a proline residue, X 71 is a lysine residue or a serine residue, and X 72 is a phenylalanine residue or a leucine residue. 0 wherein amino acid residue symbols enclosed in parentheses identify alternative residues for the same position in a sequence.
  3. 4. The isolated antigen binding protein of claim 1, comprising either: 5 a. a light chain variable domain comprising: i. a light chain CDR1 sequence of SEQ ID NO: 11, 27, 43, 59, 75, 91, 107, 155, 171, 203, and 219; ii. a light chain CDR2 sequence of SEQ ID NO: 12, 28, 44, 60, 76, 156, 172, 204, and 220; and 0 iii. a light chain CDR3 sequence of SEQ ID NO:13, 29, 45, 61, 77, 93, 109, 125, 141, 157, 173, 189, and 205; b. a heavy chain variable domain comprising: i. a heavy chain CDR1 sequence of SEQ ID NO: 14, 30, 46, 62, 78, 94, 110, 126, 158, 174, 190, 206, and 222; 25 ii. a heavy chain CDR2 sequence of SEQ ID NO:15, 31, 47, 63, 79, 95, 111, 127,159,175, 191, 207, and 223; and iii. a heavy chain CDR3 sequence of SEQ ID NO: 16, 32, 48, 64, 80, 96, 112, 144, 160, 176, 208, and 224; or c. the light chain variable domain of (a) and the heavy chain variable domain 30 of (b).
  4. 5. An isolated antigen binding protein comprising either: a. a light chain variable domain sequence selected from the group consisting of: SEA 2079156vl 0081428-000011 109 i. a sequence of amino acids at least 80% identical to a light chain variable domain sequence of L1-L14 of SEQ ID NO:9, 25, 41, 57, 73, 89, 105, 121, 137,153 169, 185, 201, and 217; ii. a sequence of amino acids encoded by a polynucleotide sequence that is at 5 least 80% identical to a polynucleotide sequence encoding a light chain variable domain sequence of L1-L14 of SEQ ID NO:9, 25, 41, 57, 73, 89, 105, 121, 137,153 169, 185, 201, and 217; and iii. a sequence of amino acids encoded by a polynucleotide sequence that hybridizes under moderately stringent conditions to the complement of a polynucleotide 0 consisting of a light chain variable domain sequence of L1-L14 of SEQ ID NO: 1, 17, 33, 49, 65, 81, 97, 113, 129, 145, 161, 177, 193, and209; b. a heavy chain variable domain sequence selected from the group consisting of: i. a sequence of amino acids at least 80% identical to a heavy chain variable 5 domain sequence of H1-H14 of SEQ ID NO: 10, 26, 42, 58, 74, 90, 106, 122, 138, 154, 170, 186, 202, and 218; ii. a sequence of amino acids encoded by a polynucleotide sequence that is at least 80% identical to a polynucleotide sequence encoding a heavy chain variable domain sequence of H1-H14 of SEQ ID NO: 10, 26, 42, 58, 74, 90, 106, 122, 138, 154, 170, 186, 202, 0 and 218; and iii. a sequence of amino acids encoded by a polynucleotide sequence that hybridizes under moderately stringent conditions to the complement of a polynucleotide consisting of a heavy chain variable domain sequence of HI-H 14 of SEQ ID NO:2, 18, 34, 50, 66, 82, 98, 114, 130, 146, 162, 178, 194, and 210 25 c. the light chain variable domain of (a) and the heavy chain variable domain of (b); wherein said antigen binding protein binds to human activin A.
  5. 6. The isolated antigen binding protein of claim 5 comprising either: 30 a. a light chain variable domain sequence selected from the group consisting of L1-L14 of SEQ ID NO:9, 25, 41, 57, 73, 89, 105, 121, 137, 153, 169, 185, 201, and 217; b. a heavy chain variable domain sequence selected from the group consisting of H1-H14 of SEQ ID NO:10, 26, 42, 58, 74, 90, 106, 122, 138, 154, 170, 186, 202, and 218; or SEA 2079156vl 0081428-000011 110 c. the light chain variable domain of (a) and the heavy chain variable domain of (b).
  6. 7. The isolated antigen binding protein of claim 1 or claim 5 that, when bound 5 to activin A: a. inhibits activin A; b. cross-competes with a reference antibody for binding to activin A; c. binds to the same epitope of activin A as said reference antibody; d. binds to activin A with substantially the same Kd as said reference 0 antibody; or e. binds to activin A with substantially the same off rate as said reference antibody; wherein said reference antibody comprises a combination of light chain and heavy chain variable domain sequences selected from the group of combinations consisting of LIH1, 5 L2H2, L3H3, L4H4, L5H5, L6H6, L7H7, L8H8, L9H9, L1OH10, L11H11, L12H12, L13H13, and L14H14.
  7. 8. The isolated antigen binding protein of claim 1 or claim 5 that, when bound to a human activin A, inhibits binding of activin A to human activin A receptor.
  8. 9. The isolated antigen binding protein of claim 1 or claim 5 wherein said 0 antigen binding protein possesses at least one in vivo biological activity of a human anti Activin A antibody.
  9. 10. The isolated antigen binding protein of claim 9 wherein said biological activity is attenuation of cachexia.
  10. 11. The isolated antigen binding protein of claim 9, that attenuates cachexia in 25 colon tumor-bearing mice.
  11. 12. The isolated antigen binding protein of claim 9, that ameliorates the loss of body weight in colon tumor-bearing mice.
  12. 13. The isolated antigen binding protein of claim 9, that ameliorates the loss of body weight in a collagen-induced animal model of rheumatoid arthritis. 30 14. The isolated antigen binding protein of claim 9, that ameliorates the loss of muscle mass in a collagen-induced animal model of rheumatoid arthritis.
  13. 15. The isolated antigen binding protein of claim 9, that ameliorates the loss of fat mass in a collagen-induced animal model of rheumatoid arthritis. SEA 2079156vl 0081428-000011 111
  14. 16. The isolated antigen binding protein of claim 9, that ameliorates the loss of body weight in a AAV-activin A transfected animal model.
  15. 17. An isolated fully human antibody that specifically binds to the cysteine knot region (amino acids C 1-S33 and/or amino acids C81-E1 11) of activin A, wherein said 5 antigen binding protein possesses at least one in vivo biological activity of a human anti activin A antibody.
  16. 18. The isolated antibody of claim 17 wherein said biological activity is attenuation of cachexia.
  17. 19. The isolated antibody of claim 17, that attenuates cachexia in colon 0 tumor-bearing mice.
  18. 20. The isolated antibody of claim 17, that ameliorates the loss of body weight in colon tumor-bearing mice.
  19. 21. The isolated antibody of claim 17, that ameliorates the loss of body weight in a collagen-induced animal model of rheumatoid arthritis. 5 22. The isolated antibody of claim 17, that ameliorates the loss of muscle mass in a collagen-induced animal model of rheumatoid arthritis.
  20. 23. The isolated antibody of claim 17, that ameliorates the loss of fat mass in a collagen-induced animal model of rheumatoid arthritis.
  21. 24. The isolated antibody of claim 17, that ameliorates the loss of body 0 weight in a AAV-activin A transfected animal model.
  22. 25. A fully human antibody that specifically binds to the cysteine knot region (amino acids C 1-S33 and/or amino acids C81-E1 11) of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vitro.
  23. 26. A fully human isolated antibody that specifically binds to the cysteine 25 knot region (amino acids C1 1-S33 and/or amino acids C81-E1 11) of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vivo.
  24. 27. A fully human isolated antibody that specifically binds to amino acids K13-Y39 of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vitro. 30 28. A fully human isolated antibody that specifically binds to amino acids V82-N107 of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vitro. SEA 2079156vl 0081428-000011 112
  25. 29. A fully human isolated antibody that specifically binds to amino acids K13-Y39 of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vivo.
  26. 30. A fully human isolated antibody that specifically binds to amino acids 5 V82-N107 of activin A, wherein said antigen binding protein inhibits the binding of activin A to activin A receptor in vivo. SEA 2079156vl 0081428-000011 113
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PT2447283E (en) * 2005-09-07 2015-10-08 Pfizer Human monoclonal antibodies to activin receptor-like kinase-1 (alk-1)

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CN115362984B (en) * 2022-07-07 2024-01-16 成都中医药大学 Construction method of mouse autoimmune thyroiditis model

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