AU2010319382B2 - Kinase inhibitors - Google Patents

Kinase inhibitors

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Publication number
AU2010319382B2
AU2010319382B2 AU2010319382A AU2010319382A AU2010319382B2 AU 2010319382 B2 AU2010319382 B2 AU 2010319382B2 AU 2010319382 A AU2010319382 A AU 2010319382A AU 2010319382 A AU2010319382 A AU 2010319382A AU 2010319382 B2 AU2010319382 B2 AU 2010319382B2
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Australia
Prior art keywords
methyl
pyrrol
pyrimidin
compound
heteroatoms
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AU2010319382A
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AU2010319382A1 (en
Inventor
Sunhwa Chang
Jang-Sik Choi
Hong Woo Kim
Jung-Ho Kim
Se-Won Kim
Youngsam Kim
Jong Sung Koh
Hee Kyu Lee
Jaekyoo Lee
Sun-Hee Lim
Ho-Juhn Song
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Oscotec Inc
Genosco
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Oscotec Inc
Genosco
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Priority claimed from PCT/US2010/056583 external-priority patent/WO2011060295A1/en
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Description

KINASE INHIBITORS
RELATED APPLICATION
This application claims the benefit of U.S. Provisional Application No. 61/261,100 filed on November 13, 2009. The entire teachings of the above application are incorporated herein by reference.
BACKGROUND OF THE INVENTION
Protein kinases include a large set of structurally related phosphoryl transferases which catalyze the transfer of the terminal phosphate from ATP to the hydroxyl group of tyrosine, serine and/or threonine residues of proteins. Protein kinases are categorized into families by the substrates they phosphorylate, for example, protein tyrosine kinases (PTK) and protein serine/threonine kinases.
Phosphorylation via protein kinase(s) results in a functional change of the target protein (substrate) by changing enzyme activity, cellular location or association with other proteins. Protein kinases play vital role, not only in controlling cell growth and differentiation, but also in regulating a wide variety of cellular signal transduction pathways in which protein kinases effectively regulate production of growth factors and various cytokines such as tumor necrosis factor (TNF)-a. Examples of protein-tyrosine kinases include S YK, PYK2, FAK, ALK, AXL, CSF1R, FLT3, JAK2 (JH1 domain-catalytic), JAK3 (JH1 domain-catalytic), KIT, KIT (D816V), KIT (V559D, T670I), PDGFRB, RET, TYK2 and ZAP70.
P T/US2010/056583
- 2 -
Examples of protein-serine/threonine kinases include PIM1, AURKA, AURKB,
BMPR2, JNK1, JNK2, JNK3, LKB1, LRRK2, LRRK2(G2019S), MLK1, PAK4,
PLK4, RSK2 (Kin.Dom.l-N-terminal), S ARK, SRPK3 and TAK1.
Mis-regulation of these protein kinases has been implicated in numerous
diseases and disorders such as central nervous system disorders (e.g., Alzheimer's
disease), inflammatory and autoimmune disorders (e.g., asthma, rheumatoid
arthritis, Crohn's disease, and inflammatory bowel syndrome, and psoriasis), bone
diseases (e.g., osteoporosis), metabolic disorders (e.g., diabetes), blood vessel
proliferative disorders, ocular diseases, cardiovascular disease, cancer, restenosis,
pain sensation, transplant rejection and infectious diseases. Although biological and clinical importance of protein kinases has been recognized in the field, a continuing need exists for compounds which inhibit protein kinases to provide an effective and safe clinical therapy for the diseases associated with or mediated by protein kinases.
A need also exists for methods of administering such compounds, pharmaceutical
formulations and medicaments to patients or subjects in need thereof.
SUMMARY OF THE INVENTION
The present invention provides a compound of Formula I, or individual stereoisomers, mixture of isomers, or pharmaceutically acceptable salt thereof,
Formula I
wherein:
X is CH or N;
R1 is selected from H, halo, CN, Ci-Cio alkyl or halo(Ci-C4)alkyl, wherein Ci-Cio
alkyl, or halo(Ci-C4)alkyl is optionally substituted; - 3 -
R2 is aryl, cycloalkyl, arylalkyl, or heterocyclyl, wherein the aryl, cycloalkyl, arylalkyl, or heterocyclyl is optionally and independently substituted at one or more carbon atoms with 1-4 Rs or R5a groups; and wherein aryl and heterocyclyl having one or more nitrogen atoms is optionally and independently substituted at one or more nitrogen atoms with 1-4 R6 or RSa groups;
R3 is independently halo, CN, or R7; and R4 is selected from (CH2)„OH, (CH2)nNRnR12, C(0)NHR7, C(0)NRnR12, C(0)OR7, C(0)R7, C(0)NR7R7, C(0)NR7R8, (CH2)„NR7R7, (CH2)„NR7R8, (CH2)nCN, (CH2)nSR7, (CH2)nS(0)nR7, or (CH2)nS(0)nNR7R7, wherein each n is independently 1 or 2; wherein:
Each Rs is independently selected from halo, CF3, SR7, OR7, OC(0)R7, 0(C¾)nNR7R7, 0(CH2)„NRHR12, 0(CH2)nR7, 0(CH2)„C(0)NR"R12, 0(CH2)„C(0)NR7R7, NR7R7, NR7R8, NHC(0)NH2, C(0)OR7, N02, CN, C(0)R7, OS02CH3, S(0)„R7, S(0)„NR7R7, NR7C(0)NR7R7, NR7C(0)R7,
NR7C(0)OR7, NR7S(0)nR7, or NRnR12, wherein each n is independently 1 or 2;
Each R5a is independently selected from amino, halo, hydroxy, Ci-Cio alkyl, C2-Ci0alkenyl, C3-C10 alkynyl, C3-C]2cycloalkyl, C5-Ci0cycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl, wherein the Ci-Cio alkyl, C2- Cioalkenyl, C3-C10 alkynyl, C3-Ci cycloalkyl, C5-Ci0cycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1 to 3 groups selected from halo, hydroxy, alkyl, R9, or R10; Each R6 is independently R7, C(0)CH2CN, C(0)R7, C(0)OR7, C02(Cr C6alkyl), C(0)NR7R7, S02NR7R7,or S02R7;
Each R6a is independently hydroxy, Ci-Cio alkyl, C2-Cio alkenyl, C3-C10 alkynyl, C3-C12 cycloalkyl, C5-C10 cycloalkenyl, haloalkyl, wherein each R6a group is optionally and independently substituted with 1 -3 groups selected from hydroxy, aryl, alkyl, halo, R9, or R10;
Each R7 is independently H, Ci-Cioalkyl, C2-Cioalkenyl, C3-Cioalkynyl, C3- C12 cycloalkyl, C5-Ci2cycloalkenyl, aryl, aryl(Ci-C4)alkyl, haloalkyl, heteroaryl, or heterocyclyl, wherein the Ci-Cioalkyl, C2-Cioalkenyl, C3- Cioalkynyl, C3-C12 cycloalkyl, C5-Ci2cycloalkenyl, aryl, aryl(Ci-C4)alkyl, haloalkyl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from aryl, cycloalkyl, heteroaryl, heterocyclyl, alkyl, halo, amino, hydroxy, R9, or R10;
Each R8 is independently C(0)R7, C(0)OR7, C(0)NR7R7, or S(0)nR7, wherein n is 1 or 2;
Each R9 is independently CF3, SR7, OR7, NR7R7, NRnR12, C(0)NR7R7, C(0)NRuR12, S(0)nNR7R7, or S(0)„R7, wherein each n is independently 1 or 2;
Each R'° is C(0)0(C C6)alkyl, or and
R11 and R12, taken together with the nitrogen atom to which they are bonded form:
i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally 10 056583
and independently substituted with 1-4 groups selected from Rs or R5a at one or more substitutable carbon atoms;
ii) a 5-8 membered saturated or partially saturated ring having 1 -3
heteroatoms, in addition to the nitrogen atom to which R11 and R12 are
bonded, wherein said 1-3 heteroatoms are independently selected from
nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8
membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected
from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a;
iii) a 9-10 membered saturated or partially saturated bicyclic ring having no
heteroatom other than the nitrogen atom to which R11 and R12 are
bonded, wherein said 9-10 membered saturated or partially saturated
bicyclic ring having no heteroatom is optionally substituted with 1-4
groups independently selected from R5 or R5a at one or more
substitutable carbon atoms;
iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1 -5
heteroatoms, in addition to the nitrogen atom to which Ru and R12 are
bonded, wherein said heteroatoms are independently selected from
nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or
sulfoxamide; or
v) a 6- 14 membered saturated or partially saturated bridged ring having 1 -3
heteroatoms in addition to the nitrogen atom to which R11 and R12 are
bonded, wherein said 1-3 heteroatoms are independently selected from
nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14
membered saturated or partially saturated bridged ring having 1-3
heteroatoms is optionally and independently substituted with 1-4
groups selected from R5 or R5a at one or more substitutable carbon
atoms and at one or more substitutable nitrogen atoms with R6 or RSa; pharmaceutically acceptable salt thereof. T U 2010/056583
In certain aspects, R1 is selected from H, F, CI, Br, CF3, or C¾. R1 is
optionally substituted.
In certain aspects, R2 is aryl, cycloalkyl, arylalkyl, or heterocyclyl. The aryl, cycloalkyl, arylalkyl, or heterocyclyl is optionally and independently substituted at
one or more carbon atoms with 1 -4 R5 or R5a groups. In one embodiment, R2 can be an aryl and the aryl optionally substituted at one or more carbon atoms with 1-4 R5
or R5a groups. The aryl of R2 can be heteroaryl containing one or more heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone. The
heteroaryl and heterocyclyl of R2 can have one or more nitrogen atoms optionally
and independently substituted with 1-4 R6 or R61 groups. The aryl group of R2 can
be, for example, a 5-6 membered monocyclic aryl group having 0-3 heteroatoms
independently selected from nitrogen, oxygen, or sulfur; an 8-10 membered bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen,
sulfur, sulfoxide, or sulfone; an 8-10 membered partially unsaturated bicyclic aryl
group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone; or an 8-10 membered partially unsaturated bicyclic aryl group
having a carboxamide or sulfoxamide.
In one embodiment, the aryl of R2 is a 5-6 membered monocyclic aryl group such as phenyl, pyrimidinyl, or pyridyl optionally and independently substituted
with 1 , 2, or 3 groups selected from methyl, ethyl, phenyl, 2-hydroxyethoxy,
isopropyl, methoxy OC6H5, OCH2C6H5, OCH2CH2NR1 'R12, OCH2C¾NR7R7,
OCH2C(0)NRuR12, OCH2C(0)NR7R7, CF3, OS02CH3, S02CH3, S02NHC¾, or
NRnR12.
In another embodiment, R2 is an 8-10 membered bicyclic aryl group having
0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, or sulfoxide.
The bicyclic aryl of R2 is selected from indolyl, indazolyl, naphthyl, or quinolinyl
optionally and independently substituted with 1, 2 or 3 groups selected from alkyl,
alkoxy, halo, aryl, heteroaryl, cycloalkyl, CF3, OCF3, C(0)alkyl, C(0)aryl,
S(0)2alkyl at the substitutable carbon atoms or nitrogen atom, wherein alkyl, aryl, or heteroaryl is optionally substituted with hydroxy, amino or sulfone. P T/US2010/056583
In another embodiment, R2 is an 8-10 membered partially saturated bicyclic
aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen,
sulfur, sulfoxide, or sulfone. For example, the 8-10 membered partially saturated
bicyclic group is dihydrobenzodioxinyl, tetrahydronaphthyl, or dihydroindenyl
optionally and independently substituted with 1, 2, or 3 groups selected from alkyl, aryl, heteroaryl, alkoxy, halo, CF3, OCF3) or SO2CH3 at substitutable carbon atoms.
In certain aspects, R3 is H, methyl, cyclopropyl, isopropyl, furanyl, CF3 or
phenyl.
In one embodiment, R4 is C(0)OR7 and R7 is independently H, Cj-Cio alkyl,
C2-C10 alkenyl, C3-C10 alkynyl, C3-C12 cycloalkyl, C5-C12 cycloalkenyl, aryl,
haloalkyl, heteroaryl, or heterocyclyl. C1-C10 alkyl, C2-C10 alkenyl, C3-C10 alkynyl,
C3-C12 cycloalkyl, C5-C12 cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from hydroxy,
halo, amino, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. For example, R7 is
independently H or C1-C10 alkyl. Further, the Q-Cio alkyl of R7 can be optionally
and independently substituted with 1 -4 groups selected from halo, hydroxy, amino,
Ci-Ce alkyl, Ci-C6 alkoxy, C1-C6 alkylamino, or diCi-C6 alkylamino.
In one embodiment, R4 is C(0)R7 and R7 of C(0)R7 is independently CrCio alkyl, C2-C10 alkenyl, C3-C10 alkynyl, C3-C12 cycloalkyl, C5-C12 cycloalkenyl, aryl,
haloalkyl, or heterocyclyl optionally and independently substituted with 1-4 groups
selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. For example, R7 can be independently selected from H or C1-C10 alkyl. The C1-C10 alkyl of R7 can be optionally and independently substituted with 1-4 groups from halo, hydroxyl,
amino, Ci-Ce alkyl, Ci-C alkoxy, Ci-C6 alkylamino or diCj-C6 alkylamino.
In one embodiment, R4 is C(0)NHR7 and R7 is independently H, Cj-Cio
alkyl, C2-C10 alkenyl, C2-C10 alkynyl, C3-Ci2 cycloalkyl, C4-C12 cycloalkenyl, aryl,
arylalkyl, haloalkyl, or heterocyclyl. C1-C10 alkyl, C2-C10 alkenyl, C2-C10 alkynyl,
C3-C12 cycloalkyl, C4-C12 cycloalkenyl, aryl, arylalkyl, haloalkyl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from halo, aryl,
cycloalkyl, heterocyclyl, alkyl, R9 or R10. In one embodiment, R7 can be selected
from C1-C10 alkyl or aryl. The aryl can be phenyl optionally and independently substituted with 1, 2, or 3 groups selected from methyl, methoxy, hydroxy, OC(0)R7, CH2OH, C¾CH2OH, N¾, NR7R7, NHC(0)NHR7, NHS02R7, C(0)OR7, C(0)NHR7 CF3, or S02CH3. Preferred substituents are methyl, methoxy, CF3, and SO2CH3. The C1-C10 alkyl of R7 is optionally and independently substituted with 1- 4 groups selected from amino, halo, hydroxyl, phenyl, phenylalkyl, C C6 alkyl, Ci- C alkoxy, Ci-C^ alkylamino or diCi-C<¾ alkylamino.
In one embodiment, R4 is C(0)NRuR12 and R11 and R12, taken together with the nitrogen atom to which they are bonded form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which RH and R12 are bonded, in which the 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms; (ii) a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which Ru and R12 are bonded, in which the 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and in which said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a; (iii) a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R1 1 and R12 are bonded, in which the 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the bound nitrogen atom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms; or (iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide. For example, the 3-8 membered saturated or partially saturated ring having no heteroatom other than the bound nitrogen atom can be optionally and independently substituted with 1-4 hydroxy or amino groups. In one embodiment, R4 is (CH2)nNR7R7. R7 of (CH2)nNR7R7 is independently H, Cj-Cio alkyl, C2-C10 alkenyl, C3-C10 alkynyl, C3-C12 cycloalkyl, C5-C12 cycloalkenyl, aryl, haloalkyl or heterocyclyl. R7 of (CH2)„ R7R7 is optionally and independently substituted with 1-4 groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. For example, R7 can be independently H, CrCio alkyl, C Ci2 cycloalkyl, aryl, or heterocyclyl and R7 is optionally and independently substituted with 1-4 groups selected from hydroxyl, amino, aryl, alkyl or halo. In one embodiment, R7 is independently H or C1-C10 alkyl. The C1-C10 alkyl is optionally substituted with phenyl. The phenyl can be optionally and independently substituted with one or more alkyl, halo, amino, or hydroxyl.
In some aspects, R4 is (CH2)„NRUR12 and Ru and R12, taken together with the nitrogen atom to which they are bonded form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which Ru and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms; (ii) a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a; (iii) a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms; (iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1 -5 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide; or (v) a 6-14 membered saturated or partially saturated bridged ring 3
- 10 - having 1-3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are
bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen,
oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or
partially saturated bridged ring having 1-3 heteroatoms is optionally and
independently substituted with 1-4 groups selected from R5 or R5a at one or more
substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6
or R6a.
In one embodiment, R4 is (CH2)nNRuR12 and R11 and R12, taken together
with the nitrogen atom to which they are bonded form a 3-8 membered saturated or
partially saturated ring having no heteroatom other than the nitrogen atom to which
R11 and R12 are bonded. The 3-8 membered saturated or partially saturated ring
having no heteroatom other than the bound nitrogen atom is optionally and
mdependently substituted with 1-4 groups selected from R5 or R5a at one or more
substitutable carbon atoms. The 3-8 membered saturated or partially saturated ring
having no heteroatom other than the bound nitrogen can be a 4, 5 or 6 membered
saturated ring optionally and independently substituted with one or more hydroxy,
OC(0)R7, C¾OH, CH2CH2OH, NH2, NR7R7, NHC(0)NHR7, NHS02R7, C(0)OR7 or C(0)NHR7 at one or more substitutable carbon atoms. Preferably, the 3-8
membered ring is selected from azetidinyl, pyrrolidinyl, or piperidinyl optionally
and mdependently substituted with hydroxy, halo, OC(0)R7, CH2OH, CH2CH2OH,
NH2, NR7R7,.NHC(0) HR7, NHS02R7, C(0)OR7, or C(0)NHR7 at one or more
substitutable carbon atoms.
In one embodiment, R4 is (CH2)„NRnR12 and Rn and R12, taken together
with the nitrogen atom to which they are bonded form a 5-8 membered saturated or
partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to
which R11 and R12 are bonded. The 1-3 heteroatoms are mdependently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and the 5-8 membered saturated or
partially saturated ring having 1-3 heteroatoms is optionally and mdependently
substituted with 1-4 groups selected from R5 or R5 at one or more substitutable
carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a. For
example, the 5-8 membered saturated or partially saturated ring having 1-3 6583
- 11 - heteroatoms is a 6 or 7 membered saturated ring having 1 heteroatom. The
heteroatom can be nitrogen optionally substituted with Ci-Cio alkyl, hydroxyl C2- Cioalkyl, or C(0)NHR7. Alternatively, the heteroatom can be oxygen. In one
embodiment, the oxygen, together with R11, R12 and with the nitrogen atom to which they are bonded, can form morpholino. The 5-8 membered saturated or partially
saturated ring having 1 -3 heteroatoms can be morpholino, thiomorpholino,
piperazinyl, or homopiperazinyl. The piperazinyl or homopiperazinyl is optionally
and independently substituted with hydroxy, C1-C10 alkyl, CH2CH2OH, C(0)R7,
C(0)NHR7, S02R7, SO2NHR7 or C(0)OR7 at the nitrogen atom.
In one embodiment, R4 is (CH aNR1 'R12 and R11 and R12, taken together
with the nitrogen atom to which they are bonded can form a 9-10 membered
saturated or partially saturated bicyclic ring having no heteroatom other than the
nitrogen atom to which R11 and R12 are bonded. The 9-10 membered saturated or
partially saturated bicyclic ring having no heteroatom other than the bound nitrogen
atom is optionally substituted with 1 -4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms. For example, the bicyclic ring can form
tetrahydroisoquinoline. The bicyclic ring can also contain an aryl group within the
ring.
In one embodiment, R4 is (CH2)„NRUR12 and R11 and R12, taken together
with the nitrogen atom to which they are bonded can form a 9- 10 membered
saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to
the nitrogen atom to which R11 and R12 are bonded. The 1-5 heteroatoms are
independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone,
carboxamide, or sulfoxamide. The 9-10 membered saturated or partially saturated
bicyclic ring having 1-5 heteroatoms can be optionally and independently
substituted with 1-4 groups selected from R5 or R5a at one or more substitutable
carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a. The
bicyclic ring can also contain an aryl group within the ring.
In one embodiment, R4 is (CH2)„NRnR12 and R11 and R12, taken together
with the nitrogen atom to which they are bonded can form a 6-14 membered
saturated or partially saturated bridged ring having 1-3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1 -3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6 .
The present invention also relates to compositions comprising these compounds, methods of making these compounds, methods of inhibiting enzyme activity, particularly SYK, PYK2, FAK, ZAP70, PIMl, RET, FLT3, JAK2 and LRRK2 kinase activity, through use of these compounds, and method of treating disease or disease symptoms in a mammal, particularly where inhibition of the kinase activity, can affect disease outcome.
The compounds of Formula (I) are useful for inhibiting one or more protein kinases and for treating diseases and disorders that are mediated by the protein kinases, such as cancer, autoimmune diseases, infection, cardiovascular disease, and neurodegenerative diseases.
In one aspect, the present invention provides pharmaceutical compositions comprising a compound of Formula (I) and a pharmaceutically acceptable carrier. In certain embodiments, such pharmaceutical compositions are formulated for intravenous administration, subcutaneous administration, inhalation, oral administration, rectal administration, parenteral, intravitreal administration, intramuscular administration, intranasal administration, dermal administration, topical administration, otic administration, ophthalmic administration, buccal administration, tracheal administration, bronchial administration, or sublingual administration. In other embodiments, such pharmaceutical composition are formulated as tablets, a pills, capsules, a liquid, an inhalant, a nasal spray solution, a suppository, a solution, a gel, an emulsion, an ointment, eye drops or ear drops.
In one aspect, the present invention provides methods of inhibiting SYK, PYK2, FAK, ZAP70, PIMl, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2 signaling in vivo or in vitro, comprising administering to said subject an effective amount of the compound of Claim 1.
In one aspect, the present invention provides methods for treating a cell- proliferative disease or condition, such as cancer, comprising administering to a subject in need of such treatment a therapeutically effective amount of the compound of Formula (I) or pharmaceutically acceptable salts, pharmaceutical compositions or medicaments thereof, wherein the cell proliferative disease or condition include, for example, lymphoma, osteosarcoma, melanoma, breast cancer, renal cancer, prostate cancer, colorectal cancer, thyroid cancer, ovarian cancer, pancreatic cancer, neuronal cancer, lung cancer, uterine cancer or gastrointestinal cancer. In one aspect, the present invention provides methods of inhibiting growth of cancer cells with the compound of Claim 1 or a pharmaceutically acceptable salt thereof.
In another aspect, the present invention provides a medicament for treating a SYK, PYK2, FA , ZAP70, PIM1, FLT3, RET, JA 2, JAK3, LRRK2,
LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAKl, or TYK2 -mediated disease, disorder or condition in a patient comprising a therapeutically effective amount of the compound of Formula (I).
In another aspect, the present invention provides the use of the compound of
Formula (I) in the manufacture of a medicament for treating a SYK, PYK2, FAK, ZAP70, PIM1, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S),
ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAKl, or TYK2 - mediated disease, disorder or condition.
In another aspect, the present invention provides methods for inhibiting a protein kinase, comprising administering to a subject in need thereof, a therapeutically effective amount of the compound of Formula (I) or a pharmaceutically acceptable salt or pharmaceutical composition thereof. The protein kinase includes, but is not limited to, SYK, PYK2, FAK, ZAP70, PI 1, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MK K2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2 kinase.
In another aspect, the present invention provides methods for inhibiting a protein kinase, comprising contacting to a cell with the compound of Formula (I). In certain embodiment, the compound of Formula (I) effectively inhibits activity of one or more kinases selected from SYK, PYK2, FAK, ZAP70, PIMl, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2.
In another aspect, the present invention provides methods for treating a protein kinase-mediated disease or condition comprising administering to a subject in need of such treatment a therapeutically effective amount of the compound of Formula (I) or a pharmaceutically acceptable salt, a pharmaceutical composition or a medicament thereof. The protein kinase includes, but is not limited to, SYK, PYK2, FAK, ZAP70, PIMl, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S
ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2.
In certain embodiments, protein kinase-mediated diseases or conditions are inflammatory diseases or conditions, respiratory diseases or autoimmune diseases or conditions, such as asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), ulcerative colitis, Crohn's disease, bronchitis, dermatitis, allergic rhinitis, psoriasis, scleroderma, urticaria, rheumatoid arthritis, multiple sclerosis, cancer, breast cancer, HIV associated diseases or lupus.
In another aspect, the present invention provides methods for treating a neurological/neurodegenerative disease or condition by administering to a subject a therapeutically effective amount of the compound of Formula (I) or a
pharmaceutically acceptable salt. In certain embodiment, such
neurological/neurodegenerative disease or condition includes, for example, Alzheimer's disease, cerebral edema, cerebral ischemia, multiple sclerosis, neuropathies, Parkinson's disease, blunt or surgical trauma (including post-surgical 6583
- 15 - cognitive dysfunction and spinal cord or brain stem injury), as well as the
neurological aspects of disorders such as degenerative disc disease and sciatica.
In another aspect, the present invention provides methods for treating a
cardiovascular disease by administering to a subject a therapeutically effective
amount of the compound of Formula (I) or a pharmaceutically acceptable salt. Such a cardiovascular disease affects the heart or blood vessels and includes, for example, atherosclerosis, arrhythmia, angina, myocardial ischemia, myocardial infarction,
cardiac or vascular aneurysm, vasculitis, stroke, peripheral obstructive arteriopathy
of a limb, an organ, or a tissue, reperfusion injury following ischemia of an organ or a tissue, endotoxic, surgical, or traumatic shock, hypertension, valvular heart
disease, heart failure, abnormal blood pressure, vasoconstriction, vascular
abnormality, or inflammation.
In another aspect, the present invention provides methods of treating a
kinase-mediated disease or condition by administering to a subject a therapeutically effective amount of the compound of Formula (I) or a pharmaceutically acceptable
salt in combination with a second therapeutic agent.
In the above methods for using the compound of the invention, the
compound of Formula (I) or a pharmaceutically acceptable salt is administered to a
system comprising cells or tissues. In certain embodiments, the compound of
Formula (I), a pharmaceutically acceptable salt, a pharmaceutical composition or a
medicament thereof is administered to a human or animal subject.
DETAILED DESCRIPTION OF THE INVENTION
The present invention provides a group of pyrollopyrimidine derivatives and pharmaceutically acceptable salts thereof that are useful for inhibiting one or more
protein kinases and for treating diseases and disorders that are mediated by the
protein kinase, for example, cell proliferative disease and disorder such as cancer,
autoimmune diseases, infection, cardiovascular disease, and neurodegenerative
disease and disorder such as Alzheimer's disease. The present invention also
provides methods for synthesizing and administering the pyrollopyrimidine 10 056583
- 16 - derivatives. The present invention also provides pharmaceutical formulations
comprising at least one of the compounds of the present invention together with a
pharmaceutically acceptable carrier, diluent or excipient therefor. The invention
also provides useful intermediates generated during syntheses of the
pyrollopyrimidine derivative compounds.
The present invention provides a compound of Formula I, or individual
stereoisomer, mixture of isomers, or pharmaceutically acceptable salt thereof,
Formula I. is CH or N.
R1 is selected from H, halo, CN, Ci-Cioalkyl, or halo(Ci-C4)alkyl. For
example, R1 can be H, F, CI, Br, CF3 or CH3. Ci-Cwalkyl, or halo(C,-C )alkyl of R1 can be optionally substituted with one or more suitable substituents, for example,
halo, amino, hydroxy, alkoxy, or haloalkyl.
R2 is aryl, cycloalkyl, arylalkyl, or heterocyclyl. The aryl, cycloalkyl,
arylalkyl, or heterocyclyl group of R2 is optionally and independently substituted at one or more carbon atoms with 1 -4 R5 or R3a groups; and at one or more nitrogen
atoms with 1 -4 R6 or R6a groups. R2 can be an aryl, arylalkyl, or heterocyclyl group having one or more heteroatoms selected from nitrogen, oxygen, sulfur, sulfoxide,
sulfone, carboxamide, or sulfoxamide. Such heteroaryl, heteroarylalkyl, or
heterocyclyl of R2 has one or more nitrogen heteroatoms optionally and
independently substituted with 1-4 R6 or R6a groups.
The aryl groups of R2, and in general, include, but are not limited to: (1) a 5- 6 membered monocyclic aryl group having 0-3 heteroatoms independently selected
from nitrogen, oxygen, or sulfur; (2) an 8-10 membered bicyclic aryl group having
0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone; (3) an 8-10 membered partially saturated bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone; or (4) an 8-10 membered partially saturated bicyclic aryl group having a carboxamide or sulfoxamide. Non-limiting examples of the aryl groups of R2 include phenyl, 3-chlorophenyl, 2,6-dibromophenyl, pyrimidinyl, pyridyl, 3- methylpyridyl, benzothienyl, 2,4,6-tribromophenyl, 4-ethylbenzothienyl, furanyl, benzofuranyl, indolyl, indazolyl, dihydrobenzodioxinyl, dihydroindenyl, 3,4- diethylfuranyl, naphthyl, tetrahydronaphtyl, quinolinyl, 4,7-dichloronaphthyl, pyrrole, pyrazole, imidazole, thiazole and the like. The aryl group of R2 can be optionally substituted.
Specifically, R2 can be a 5-6 membered monocyclic aryl group having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur. For example, the 5-6 membered monocyclic aryl of R2 is phenyl optionally and independently substituted with 1, 2 or 3 groups selected from methyl, ethyl, isoprophyl, methoxy, 2-hydroxyethoxy, CF3, OC6H5, OCH2C6H5, OCH2CH2NR1 lRn, OCH2CH2NR7R7, OCH2C(0)NRnR12, OCH2C(0)NR7R7, OS02CH3, S02C¾, S02NHCH3, or NRUR12. Hydroxyethoxy is OC¾CH2OH. Briefly, RUR12 of OCH2CH2NRuR12, OCH2C(0)NRuR12, or NRUR12, taken together with the nitrogen atom to which they are bonded can form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, for example, pyirolidinyl or piperidinyl; or (ii) a 5-8 membered saturated or partially saturated ring having 1 -3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, for example, morpholino, piperazinyl, or homopiperazinyl. , Descriptions of RUR12 are further discussed in detail below.
R2 can be an 8-10 membered bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone. For example, the 8-10 membered bicyclic aryl group can be selected from indolyl, indazolyl, benzothiophenyl, benzothiazolyl, benzofuranyl, naphthyl, or quinolinyl optionally and independently substituted with 1 , 2 or 3 groups selected from alkyl, aryl, heteroaryl, alkoxy, halo, haloalkyl, cycloalkyl, or sulfone, such as CF3, OCF3, C(0)C H5, or S(0)2CH3 at the substitutable carbon atoms or nitrogen atom, wherein alkyl, aryl or heteroaryl is optionally substituted with hydroxyl, amino, or sulfone. can be an 8-10 membered partially saturated bicyclic group having a phenyl ring fused to a non-aromatice carbocyclic or heterocyclic ring having 0-5 heteroatoms mdependently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone. For example, the 8-10 membered partially saturated bicyclic group is dihydroindenyl, tetrahydronaphthyl, or dihydrobenzodioxinyl optionally and mdependently substituted with 1, 2, or 3 groups selected from alkyl, aryl, heteroaryl, alkoxy, halo, CF3, OCF3, or SO2CH3 at the substitutable carbon atoms.
R3 can be H, halo, CN or R7. For example, R3 is selected from H, Ci-C alkyl, cycloalkyl, or aryl. Preferably, R3 is selected from H, cyclopropyl, isopropyl, furanyl, methyl, ethyl, CF3, or phenyl. The methyl, ethyl, or phenyl can be optionally and mdependently substituted with one or more groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9, or R10.
Each R5 is independently selected from halo, CF3, SR7, OR7, OC(0)R7,
0(CH2)„NR7R7, 0(CH2)„NRuR12, 0(CH2)nR7, 0(CH2)„C(0)NRnR12,
0(CH2)„C(0)NR7R7, NR7R7 5 NR7RS, NHC(0)NH2, C(0)OR7, N02, CN, C(0)R7, OS02CH3, S(0)„R7, S(0)nNR7R7, NR7C(0)NR7R7, NR7C(0)R7, NR7C(0)OR7, NR7S(0)„R7, or NRnR12. Each n is independently 1 or 2.
Each R5a is independently selected amino, halo, hydroxy, C1-C10 alkyl, C2-
Cioalkenyl, C3-C10 alkynyl, C3-C12cycloalkyl, C5-Ci0cycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl. The C1-C10 alkyl, C2-Ci0alkenyl, C3-C10 alkynyl, C3-Ci2cycloalkyl, Cs-Ciocycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl of R5a is optionally and independently substituted with 1 to 3 groups selected from halo, hydroxy, alkyl, R9, or R10.
Each R6 is independently R7, C(0)CH2CN, C(0)R7, C(0)OR7, C02(Ci- C6alkyl), C(0)NR7R7, S02NR7R7,or S02R7.
Each R6a is independently hydroxy, CpCio alkyl, C2-Ci0 alkenyl, C3-C10 alkynyl, C3-Ci2 cycloalkyl, C5-C10 cycloalkenyl, haloalkyl. Each R6a group is optionally and independently substituted with 1-3 groups selected from hydroxy, aryl, alkyl, halo, R9, or R10. 3
- 19 -
Each R7 is independently H, Ci-Ci0alkyl, C2-Ci0alkenyl, C3-Ci0alkynyl, C3- Ci2 cycloalkyl, C5-Ci2cycloalkenyl, aryl, aryl(Ci-C4)alkyl, haloalkyl, heteroaryl, or
heterocyclyl. The Ci-Ci0alkyl, C2-Cioalkenyl, C3-C10alkynyl, C3-C12 cycloalkyl, C5- Ci2cycloalkenyl, aryl, aryl(Ci-C4)alkyl, haloalkyl, heteroaryl, or heterocyclyl is
optionally and independently substituted with 1-4 groups selected from aryl,
cycloalkyl, heteroaryl, heterocyclyl, alkyl, halo, amino, hydroxy, R9, or R10.
Each RS is independently C(0)R7, C(0)OR7, C(0)NR7R7 or S(0)NR7. n is 1 or 2.
Each R9 is independently CF3, SR7, OR7, NR7R7, NRNR12, C(0)NR7R7,
C(0)NR' 'R12, S(0)„NR7R7, or S(0)NR7, wherein each n is independently 1 or 2.
Each n is independently 1 or 2.
Each R10 is C(0)0(Ci-C6)alkyl or haloid-C^alkyl.
R11 and R12, taken together with the nitrogen atom to which they are bonded form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom
other than the nitrogen atom to which R11 and R12 are bonded, wherein said 3-8
membered saturated or partially saturated ring includes, but is not limited to,
azetidinyl, pyrrolidynyl, or piperidynyl, optionally and independently substituted
with 1-4 groups selected from R5 or R5A at one or more substitutable carbon atoms;
(ii) a 5-8 membered saturated or partially saturated ring having 1 -3 heteroatoms, in
addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3
heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or
sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring
having 1 -3 heteroatoms includes, but is not limited to, morpholino, thiomorpholino, piperazinyl or homopiperazinyl optionally and independently substituted with 1-4
groups selected from R5 or R5A at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R A; (iii) a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen
atom to which R11 and R12 are bonded, wherein said 9-10 membered saturated or
partially saturated bicyclic ring having no heteroatom is optionally substituted with
1-4 groups independently selected from R5 or R5 at one or more substitutable
carbon atoms; (iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1 -5 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide; or (v) a 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1 -3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
R4 is selected from (CH2)nOH, (CH2)nNRuR12, C(0)NHR7, C(0) RnR12, C(0)OR7, C(0)R7, C(0)NR7R7, C(0)NR7Rs, (CH2)„NR7R7, (CH2)nNR7R8, (CH2)„CN, (CH2)„SR7, (CH2)„S(0)„R7, or (CH2)nS(0)0NR7R7. Each n is independently 1 or 2.
When R4 is C(0)OR7, R7 of C(0)OR7 is H, OCioalkyl, C2-Cio alkenyl, C3-
Cioalkynyl, C3-Ci2cycloalkyl, Cs-Ci2cycloalkenyl, aryl, haloalkyl or heterocyclyl. The Ci-Cioalkyl, C2-Cio alkenyl, C3-Ci0alkynyl, C3-Ci2cycloalkyl, C5- C[2cycloalkenyl, aryl, haloalkyl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. When R4 is C(0)OR7, R7 is preferably methyl, ethyl or propyl optionally and independently substituted with one or more groups selected from halo, hydroxy, amino, Ci-Ce alkyl, Ci-Ce alkoxy, Ci-C6 alkylamino, or diC[-C6 alkylamino.
When R4 is C(0)R7, R7 of C(0)R7 is independently H, C,-Ci0 alkyl, C2-Ci0 alkenyl, C3-C10 alkynyl, C3-Ci2 cycloalkyl, Cs-Ci2 cycloalkenyl, aryl, haloalkyl or heterocyclyl. The group represented by R7 is optionally and independently substituted with 1-3 groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. For example, R7 can be selected from H or Cj-Cio alkyl and the R7 group can be optionally and independently substituted with 1-4 groups selected from halo, hydroxy, amino, C1-C6 alkyl, C^Ce alkoxy, i-Ce alkylamino or diCi-Ce alkylamino.
When R4 is C(0)NHR7, R7 of C(0)NHR7 is selected from H, C rC loalkyl,
C2-Cioalkenyl, C3-Ci0alkynyl, C3-Ci2cycloalkyl, Cs-Ci2cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl. The Ci-Cio alkyl, C2-Cio alkenyl, C3-C10 alkynyl, C3-C12 cycloalkyl, Cs-C12 cycloalkenyl, aryl, haloalkyl, heteroaryl or heterocyclyl is optionally and independently substituted with 1 -4 groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9 or R10. In one embodiment, R7 is phenyl and the phenyl can be optionally and independently substituted with 1 , 2, or 3 groups selected from methyl, ethyl, methoxy, CF3> OC(0)R7, CH2OH, CH2CH2OH, NH2, NR7R7, NHC(0)NHR7, NHS02R7, C(0)OR7, C(0)NHR7, or S02CH3. R7 can be Q- C10 alkyl and the C1-C10 alkyl group is optionally and independently substituted with 1 -3 groups selected from amino, halo, hydroxy, phenyl, Ci-Ce alkyl, Ci-C6 alkoxy, CI-C alkylamino, or diCi-Ce alkylamino.
When R4 is C(0)NR! 'R12, R1 1 and R12, taken together with the nitrogen atom to which they are bonded form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which RU and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1-4 groups selected from R5 or R5A at one or more substitutable carbon atoms; (ii) a 5-8 membered saturated or partially saturated ring having 1 -3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1 -3 heteroatoms is optionally and independently substituted with 1 -4 groups selected from R5 or R A at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6A; (iii) a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 9-10 membered ring saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or RSA at one or more substitutable carbon atoms; or (iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1 -5 heteroatoms, in addition to the nitrogen atom to which R1 1 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide. When R4 is C(0)NRHR12, RU and R12, taken together with the nitrogen atom to which they are bonded form a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded. The 3-8 membered saturated or partially saturated ring having no heteroatom other than the bound nitrogen atom is optionally and independently substituted with 1-4 groups selected from R5 or R5A at one or more substitutable carbon atoms. For example, the 3-8 membered saturated or partially saturated ring with no heteroatom other than the bound nitrogen atom can be azetidinyl, pyrrolidynyl, or piperidynyl optionally and independently substituted with 1-4 groups selected from hydroxy, CH2OH, CH2CH2OH, N¾, NHR7, NHCOR7, NHC(0)NHR7, or NR7R7 at substitutable carbon atoms.
When R4 is C(0)NR' LR12, R11 and R12, taken together with the nitrogen atom to which they are bonded can form a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded. The 1 -3 heteroatoms of the 5-8 membered saturated or partially saturated ring are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide. The 5-8 membered saturated or partially saturated ring having 1 -3 heteroatoms can be optionally and independently substituted with 1-4 groups selected from RS or R5A at one or more substitutable carbon atoms. The heteroatoms can be one or more nitrogen atoms and the one or more nitrogen atoms can be optionally and independently substituted with 1-4 groups of R6or R6A.
When R4 is C(0)NRNR12, R1! and R12, taken together with the nitrogen atom to which they are bonded can form a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded. The 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the bound nitrogen atom is optionally substituted with 1-4 groups independently selected from R5 or R5A at one or more substitutable carbon atoms. The 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the bound nitrogen atom can have an aryl group within the bicyclic ring. When R4 is C(0)NRuR12, R11 and R12, taken together with the nitrogen atom to which they are bonded can form a 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded. The 1-5 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide. The 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms can be optionally and independently substituted with 1-4 groups selected from R5 or R a at one or more substitutable carbon atoms. The 1 -5 heteroatoms can be one or more nitrogen atoms and the one or more nitrogen atoms can be optionally and independently substituted with 1-4 groups of R6 or R6a. The 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms can contain an aryl group within the bicyclic group.
When R4 is (CH2)„NR7R7, R7 of (C¾)„NR7R7 is independently selected from H, Ci-Cioalkyl, C2-Ci0alkenyl, C3-C10alkynyl, C3-Ci2cycloalkyl, C5-C12 cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl. Ci-Cioalkyl, C2-Ci0alkenyl, C3-Cioalkynyl, Cj-Cncycloalkyl, C5-C12 cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from halo, aryl, cycloalkyl, heterocyclyl, alkyl, R9, or R10. For example, R7 can be independently H or Ci-Cioalkyl and R7 is optionally and independently substituted with 1-4 groups selected from hydroxy, amino, aryl, alkyl or halo. In one embodiment, the C1-C10 alkyl is optionally substituted with phenyl. The phenyl can be optionally and independently substituted with one or more alkyl, halo, amino, hydroxy, alkoxy, or CF3.
When R4 is (CH2)nNRnR12, R11 and R12, taken together with the nitrogen atom to which they are bonded form: (i) a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1-4 groups selected from R5 or R54 at one or more substitutable carbon atoms; (ii) a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a; (iii) a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and RIZ are bonded, wherein said 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms; (iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide; or (v) a 6-14 membered saturated or partially saturated bridged ring having 1 -3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
In one embodiment, R4 is (CH2)nNRuR12 and R11 and R12, taken together with the nitrogen atom to which they are bonded form a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which Ru and R12 are bonded. The 3-8 membered saturated or partially saturated ring having no heteroatom other than the bound nitrogen atom is optionally and independently substituted with 1-4 groups selected from R5 or R a at one or more substitutable carbon atoms. The 3-8 membered saturated or partially saturated ring having no heteroatom other than the bound nitrogen can be a 4, 5 or 6 membered saturated ring optionally substituted at one or more substitutable carbon atoms. Preferably, the 3-8 membered ring is azetidinyl, pyrrolidinyl, or piperidinyl optionally and independently substituted with 1-2 groups selected from hydroxy, halo, OC(0)R7, CH2OH, CH2CH2OH, NH2, NR7R7, NHC(0)NHR7, NHS02R7, C(0)OR7, or C(0)NHR7 at one or more substitutable carbon atoms.
In one embodiment, R4 is (CH2)„NRUR12 and R11 and R12, taken together with the nitrogen atom to which they are bonded form a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded. The 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and the 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a. For example, the 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is a 6 or 7 membered saturated ring having 1 heteroatom. The heteroatom can be nitrogen optionally substituted with Ci-Cioalkyl, hydroxylC2- Cioalkyl, or C(0)NHR7. Alternatively, the heteroatom can be oxygen. In one embodiment, the oxygen, together with R11 , R12 and with the nitrogen atom to which they are bonded, can form morpholino. Accordingly, the 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms can be morpholino, thiomorpholino, piperazinyl, or homopiperazinyl. The piperazinyl or homopiperazinyl is optionally and independently substituted with one or more groups selected from hydroxy, Cp Cio alkyl, CH2CH2OH, C(0)R7, C(0)NHR7, S02R7, S02NHR7, or C(0)OR7 at a nitrogen atom.
In one embodiment, R4 is (CHby^R12 and R11 and R12, taken together with the nitrogen atom to which they are bonded can form a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded. The 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the bound nitrogen atom is tetrahydroisoquinoline optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms. The bicyclic ring can also contain an aryl group within the ring.
In one embodiment, R4 is (CH2)„NR' ¾12 and R11 and R12, taken together with the nitrogen atom to which they are bonded can form a 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to the nitrogen atom to which Ru and R12 are bonded. The 1-5 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide, or sulfoxamide. The 9-10 membered saturated or partially saturated bicyclic ring having 1 -5 heteroatoms can be optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a. The bicyclic ring can also contain an .aryl group within the ring.
In one embodiment, R4 is (CH2)nNRnR12 and Rn and R12, taken together with the nitrogen atom to which they are bonded can form a 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
The term "alkyl," used alone or as part of a larger moiety such as "arylalkyl" or "cycloalkyl" refers to a straight or branched hydrocarbon radical having from 1 to 15 carbon atoms (unless stated otherwise) and includes, for example, methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl, tert-butyl, n-pentyl, iso-pentyl, n- hexyl and the like. An alkyl can be unsubstituted or substituted with one or more suitable substituents.
The term "cycloalkyl" refers to a monocyclic or polycyclic hydrocarbon ring group and includes, for example, cyclopropyl, cycloheptyl, cyclooctyl, cyclodecyl, cyclobutyl, adamantyl, norpinanyl, decalinyl, norbornyl, cyclohexyl, cyclopentyl, and the like. A cycloalkyl group can be unsubstituted or substituted with one or more suitable substituents.
The term "hetero" refers to the replacement of at least one carbon atom member in a ring system with at least one heteroatom such as N, S, and O. 56583
- 27 -
The term "heterocycloalkyl" means a non-aromatic monocyclic or polycyclic ring comprising carbon and hydrogen atoms and at least one heteroatom, preferably,
1 to 4 heteroatoms selected from N, O, S, sulfone, or sulfoxide. A heterocycloalkyl group can have one or more carbon-carbon double bonds or carbon-heteroatom
double bonds in the ring group as long as the ring group is not rendered aromatic by their presence. Examples of heterocycloalkyl groups include azetidinyl, aziridinyl, pyrrolidinyl, piperidinyl, piperazinyl, homopiperazinyl, morpholino,
thiomorpholino, tetrahydrofuranyl, tetrahydrothiofuranyl, tetrahydropyranyl,
pyranyl, and the like. A heterocycloalkyl group can be unsubstituted or substituted
with one or more suitable substituents.
As used herein, the term "halo" includes fluoro, chloro, bromo, and iodo.
As used herein, the term "alkenyl" refers to straight and branched
hydrocarbon radicals having from 2 to 6 carbon atoms and one double bond and
includes ethenyl, 3-buten-l-yl, 2-ethenylbutyl, 3-hexen-l-yl, and the like. An
alkenyl can be unsubstituted or substituted with one or more suitable substituents.
As used herein, the term "alkynyl" refers to straight and branched
hydrocarbon radicals having from 2 to 6 carbon atoms and one triple bond and
includes ethynyl, 3-butyn-l-yl, propynyl, 2-butyn-l-yl, 3-pentyn-l-yl, and the like.
An alkynyl can be unsubstituted or substituted with one or more suitable
substituents.
As used herein, the term "alkoxy" refers to the alkyl groups above bound
through oxygen, examples of which include methoxy, ethoxy, isopropoxy, tert- butoxy, and the like. In addition, alkoxy also refers to polyethers such as -O- (C¾)2-0-CH3, and the like. An alkoxy can be unsubstituted or substituted with one or more suitable substituents.
As used herein, the term "aryl" refers to unsubstituted or substituted aromatic monocyclic or polycyclic groups and includes, for example, phenyl and naphthyl.
The term "aryl" also includes a phenyl ring fused to a non-aromatic carbocyclic or
heterocyclic ring. The term "aryl" may be interchangeably used with "aryl ring,"
aromatic group," and "aromatic ring." Heteroaryl groups have 4 to 14 atoms, 1 to 9 of which are independently selected from the group consisting of O, S and N. Heteroaryl groups have 1-3 heteroatoms in a 5-8 membered aromatic group. An aryl or heteroaryl can be a mono- or bicyclic aromatic group. Typical aryl and heteroaryl groups include, for example, phenyl, quinolinyl, indazoyl, indolyl,
dihydrobenzodioxynyl, 3-chlorophenyl, 2,6-dibromophenyl, pyridyl, pyrimidinyl, 3- methylpyridyl, benzothienyl, 2,4,6-tribromophenyl, 4-ethylbenzothienyl, furanyl, 3,4-diethylfuranyl, naphthyl, 4,7-dichloronaphthyl, pyrrole, pyrazole, imidazole, thiazole, and the like. An aryl or heteroaryl can be unsubstituted or substituted with one or more suitable substituents.
As used herein, the term "haloalkyl" refers to any alkyl radical having one or more hydrogen atoms replaced by a halogen atom. Examples of haloalkyl include - CF3 , -CF¾, -CF2H, and the like.
As used herein, the term "arylalkyl" refers to any alkyl radical having one or more hydrogen atoms replaced by an aryl group. Examples of arylalkyl include benzyl (C6H5CH2-) and the like.
As used herein, the term "hydroxyl" or "hydroxy" refers to -OH.
As used herein, the term "amino" refers to -N¾.
As used herein, the term "hydroxyalkyl" refers to any hydroxyl derivative of alkyl radical. The term "hydroxyalkyl" includes any alkyl radical having one or more hydrogen atoms replaced by a -OH group.
As used herein, the term "kinase panel" refers to a list of kinases, including but not limited to, ABLl(E255K)-phosphorylated, ABL 1 (T315I)-phosphorylated, ABLl-phosphorylated, ACVR1B, ADCK3, AKT1, AKT2, ALK, AURKA, AUR B, AXL, BMPR2, BRAF, BRAF(V600E), BTK, CDK11, CDK2, CDK3, CDK7, CDK9, CHEK1, CSF1R, CSNK1D, CS K1G2, DCAMKL1, DYRK1B, EGFR, EGFR(L858R), EPHA2, ERBB2, ERBB4, ERK1 , FAK, FGFR2, FGFR3, FLT1, FLT3, FLT4, GSK3B, IGF1R, ΙΚΚ-α, ΙΚΚ-β, INSR, JAK2(JH1 domain- catalytic), JAK3(JHldomain-catalytic), JNK1, JNK2, J K3, KIT, KIT(D816V), KIT(V559D,T670I), LKB1, LRRK2, LRRK2(G2019S), AP3K4, MAPKAPK2, MARK3, MEK1, MEK2, MET, MKNK1, MKNK2, MLK1, MTOR, p38-alpha, p38-beta, PAK1, PAK2, PAK4, PCTK1, PDGFRA, PDGFRB, PDPK1, PIK3C2B, PIK3CA, PIK3CG, PIM1, ΡΓΜ2, PIM3, PKAC-alpha, PLK1, PLK3, PLK4, PRKCE, PYK2, RAF1, RET, R10K2, ROCK2, RSK2, SNARK, SRC, SRPK3, SYK, TAK1, TGFBR1, TIE2, TRKA, TSSK1B, TYK2(JH1 domain-catalytic), ULK2, VEGFR2, YANK3 and ZAP70. Kinase assay panels containing the kinases described herein are commercially available for biochemically profiling kinase inhibitors for their selectivity.
As used herein, the term "dermatological disorder" refers to a skin disorder. Such dermatological disorders include, but are not limited to, proliferative or inflammatory disorders of the skin such as, atopic dermatitis, bullous disorders, collagenoses, contact dermatitis eczema, Kawasaki Disease, rosacea, Sjogren-Larsso Syndrome, and urticaria.
As used herein, the term "neurogenerative disease" or "nervous system disorder" refers to conditions that alter the structure or function of the brain, spinal cord or peripheral nervous system, including but not limited to Alzheimer's disease, cerebral edema, cerebral ischemia, multiple sclerosis, neuropathies, Parkinson's disease, those found after blunt or surgical trauma (including post-surgical cognitive dysfunction and spinal cord or brain stem injury), as well as the neurological aspects of disorders such as degenerative disk disease and sciatica. The acronym "CNS" refers to the central nervous system (brain and spinal cord).
As used herein, the term "respiratory disease" refers to diseases affecting the organs that are involved in breathing, such as the nose, throat, larynx, trachea, bronchi, and lungs. Respiratory diseases include, but are not limited to, asthma, adult respiratory distress syndrome and allergic (extrinsic) asthma, non-allergic (intrinsic) asthma, acute severe asthma, chronic asthma, clinical asthma, nocturnal asthma, allergen-induced asthma, aspirin-sensitive asthma, exercise-induced asthma, isocapnic hyperventilation,
child-onset asthma, adult-onset asthma, cough-variant asthma, occupational asthma, steroid-resistant asthma, seasonal asthma, seasonal allergic rhinitis, perennial allergic rhinitis, chronic obstructive pulmonary disease, including chronic bronchitis or emphysema, pulmonary hypertension, interstitial lung fibrosis and/or airway inflammation and cystic fibrosis, and hypoxia. As used herein, the term "cancer" refers to an abnormal growth of cells which tend to proliferate in an uncontrolled way and, in some cases, to metastasize. The types of cancer include, but is not limited to, solid tumors, such as those of the bladder, bowel, brain, breast, endometrium, heart, kidney, lung, lymphatic tissue (lymphoma), ovary, pancreas or other endocrine organ (thyroid), prostate, skin (melanoma) or hematological tumors (such as the leukemias).
As used herein, the term "inflammatory disorders" refers to those diseases or conditions that are characterized by one or more of the signs of pain (dolor, from the generation of noxious substances and the stimulation of nerves), heat (calor, from vasodilatation), redness (rubor, from vasodilatation and increased blood flow), swelling (tumor, from excessive inflow or restricted outflow of fluid), and loss of function, which may be partial or complete, temporary or permanent. Inflammation takes
many forms and includes, but is not limited to, inflammation that is one or more of the following, acute, adhesive, atrophic, catarrhal, chronic, cirrhotic, diffuse, disseminated, exudative, fibrinous, fibrosing, focal, granulomatous, hyperplastic, hypertrophic, interstitial, metastatic, necrotic, obliterative, parenchymatous, plastic, productive, proliferous, pseudomembranous, purulent, sclerosing, seroplastic, serous, simple, specific, subacute, suppurative, toxic, traumatic, and/or ulcerative. Inflammatory disorders further include, without being limited to those affecting the blood vessels (polyarteritis, temporarl arteritis); joints (arthritis: crystalline, osteo-, psoriatic, reactive, rheumatoid, Reiter's); gastrointestinal tract; skin (dermatitis); or multiple organs and tissues (systemic lupus erythematosus).
As used herein, the term "cardiovascular disease" refers to diseases affecting the heart or blood vessels or both, including but not limited to atherosclerosis, arrhythmia, angina, myocardial ischemia, myocardial infarction, cardiac or vascular aneurysm, vasculitis, stroke, peripheral obstructive arteriopathy of a limb, an organ, or a tissue, reperfusion injury following ischemia of an organ or a tissue, endotoxic, surgical, or traumatic shock, hypertension, valvular heart disease, heart failure, abnormal blood pressure, vasoconstriction, vascular abnormality, or inflammation. As used herein, the term "bone disease" means a disease or condition of the bone, including, but not limited to, inappropriate bone remodeling, loss or gain, osteopenia, osteomalacia, osteofibrosis, osteoporosis and Paget' s disease.
As used herein, the term "inhibitor" refers to a compound which inhibits one or more kinases described herein. For example, the term "SYK inhibitor" refers to a compound which inhibits the SYK receptor or reduces its signaling effect.
As used herein, the term "pharmaceutically acceptable" refers a material, such as a carrier or diluent, which does not abrogate the biological activity or properties of the compounds described herein. Such materials are administered to an individual without causing undesirable biological effects or interacting in a deleterious manner with any of the components of the composition in which it is contained.
As used herein, the term "pharmaceutically acceptable salt" refers to a formulation of a compound that does not cause significant irritation to an organism to which it is administered and does not abrogate the biological activity and properties of the compounds described herein.
As used herein, the term "pharmaceutical composition" refers to a mixture of a compound described herein with other chemical components, such as carriers, stabilizers, diluents, dispersing agents, suspending agents, thickening agents, and/or excipients.
As used herein, the term "prodrug" refers to an agent that is converted into the parent drug in vivo.
As used herein, the term "protein kinase-mediated disease" or a "disorder or disease or condition mediated by inappropriate protein kinase activity" refers to any disease state mediated or modulated by protein kinases described herein. Such disease states include, but are not limited to, asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), ulcerative colitis, Crohn's disease, bronchitis, dermatitis, allergic rhinitis, psoriasis, scleroderma, urticaria, bullous disorders, collagenoses, contact dermatitis eczema, Kawasaki Disease, rosacea, Sjogren-Larsso Syndrome, rheumatoid arthritis, multiple sclerosis, inflammatory bowel syndrome, HIV, lupus, lymphoma, osteosarcoma, melanoma, breast cancer, renal cancer, prostate cancer, colorectal cancer, thyroid cancer, ovarian cancer, pancreatic cancer, neuronal cancer, lung cancer, uterine cancer, gastrointestinal cancer, Alzheimer's disease, Parkinson's disease, osteoporosis, osteopenia, osteomalacia, osteofibrosis, Paget's disease, diabetes, blood vessel proliferative disorders, ocular diseases, cardiovascular disease, restenosis, fibrosis, atherosclerosis, arrhythmia, angina, myocardial ischemia, myocardial infarction, cardiac or vascular aneurysm, vasculitis, stroke, peripheral obstructive arteriopathy, reperfusion injury following ischemia of an organ or a tissue, endotoxic, surgical or traumatic shock, hypertension, valvular heart disease, heart failure, abnormal blood pressure, vasoconstriction, vascular abnormality, transplant rejection and infectious diseases including viral and fungal infections.
As used herein, the term "kinase-mediated disease" or "kinase-mediated disease" or a "disorder or disease or condition mediated by inappropriate kinase activity" refers to any disease state mediated or modulated by a kinase mechanism. For example "SYK-mediated disease" refers to any diase state mediated or modulated by SYK mechanisms. Such SYK-mediated disease states include, but are not limited to, inflammatory, respiratory diseases and autoimmune diseases, such as, by way of example only, asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDs), ulcerative colitis, Crohn's disease, bronchitis, dermatitis, allergic rhinitis, psorasis, scleroderma, urticaria, rheumatoid arthritis, multiple sclerosis, cancer, HIVassociated disease and lupus.
As used herein, the term "PYK2-mediated disease" or a "disorder or disease or condition mediated by inappropriate PYK2 activity" refers to any disease state mediated or modulated by PYK2 kinase mechanisms. Such disease states include, but are not limited to, osteoporesis, artiritis, myeloid leukemia, hypo-osmolality, sarcoma, blast crisis, glioma, erythroleukemia and cancer.
As used herein, the term "ZAP70-mediated disease" or a "disorder or disease or condition mediated by inappropriate ZAP70 activity" refers to any disease state mediated or modulated by ZAP70 kinase mechanisms. Such disease states include, but are not limited to, immunodeficiency diseases characterized by a selective absence of CD8-positive T-cells. As used herein, the term "FAK-mediated disease" or a "disorder or disease or condition mediated by inappropriate FAK activity" refers to any disease state mediated or modulated by FAK kinase mechanisms. Such disease states include, but are not limited to, cancer, macular degeneration or a condition associated with aberrantly increased levels of angiogenesis.
As used herein, the term "PIM1 -mediated disease" or a "disorder or disease or condition mediated by inappropriate PIM1 activity" refers to any disease state mediated or modulated by ΡΓ 1 kinase mechanisms. Such disease states include, but are not limited to, cancer, myeloproliferative diseases, autoimmune diseases, allergic reactions and in organ transplantation rejection syndromes.
As used herein, the term "FLT3 -mediated disease" or a "disorder or disease or condition mediated by inappropriate FLT3 activity" refers to any disease state mediated or modulated by FLT3 kinase mechanisms. Such disease states include, but are not limited to, leukemia including acute myelogenous leukemia or a condition associated with aberrantly increased levels of FLT3 kinase.
As used herein, the term "RET-mediated disease" or a "disorder or disease or condition mediated by inappropriate RET activity" refers to any disease state mediated or modulated by RET kinase mechanisms. Such disease states include, but are not limited to, thyroid cancer, a condition associated with aberrantly increased levels of RET kinase.
As used herein, the term "JAK2-mediated disease" or a "disorder or disease or condition mediated by inappropriate JAK2 activity" refers to any disease state mediated or modulated by JAK2 kinase mechanisms. Such disease states include, but are not limited to, polycythemia vera, essential thrombocythemia, other myeloproliferative disorders cancer, or a condition associated with aberrantly increased levels of JAK2 kinase.
As used herein, the term "LRRK2-mediated disease" or a "disorder or disease or condition mediated by inappropriate LRRK2 activity" refers to any disease state mediated or modulated by LRRK2 kinase mechanisms. Such disease states include, but are not limited to, Parkinson's disease, other neurodegenerative disease or a condition associated with aberrantly increased levels of angiogenesis. As used herein, the term "therapeutically effective amount" refers to any amount of a compound which, as compared to a corresponding subject who has not received such amount, results in improved treatment, healing, prevention, or amelioration of a disease, disorder, or side effect, or a decrease in the rate of advancement of a disease or disorder. The term also includes within its scope amounts effective to enhance normal physiological function.
As used herein, the term "treat," "treating" or "treatment" refers to methods of alleviating, abating or ameliorating a disease or condition symptoms, preventing additional symptoms, ameliorating or preventing the underlying metabolic causes of symptoms, inhibiting the disease or condition, arresting the development of the disease or condition, relieving the disease or condition, causing regression of the disease or condition, relieving a condition caused by the disease or condition, or stopping the symptoms of the disease or condition either prophylactically and/or therapeutically.
As used herein, the term "solvate" refers to a complex of variable stoichiometry formed by a solute (in this invention, a compound of Formula (I) or a pharmaceutically acceptable salt thereof) and a solvent. Such solvents for the purpose of the invention may not interfere with the biological activity of the solute.
Non-limiting examples of suitable solvents include water, acetone, methanol, ethanol and acetic acid. Preferably the solvent used is a pharmaceutically acceptable solvent. Non-limiting examples of suitable pharmaceutically acceptable solvents include water, ethanol and acetic acid.
As used herein, the term "subject" or "patient" encompasses mammals and non-mammals. Examples of mammals include, but are not limited to, humans, chimpanzees, apes monkeys, cattle, horses, sheep, goats, swine; rabbits, dogs, cats, rats, mice, guinea pigs, and the like. Examples of non-mammals include, but are not limited to, birds, fish and the like.
As used herein, the term "administration" or "administering" of the subject compound refers to providing a compound of the invention to a subject in need of treatment. As used herein, the term "carrier" refers to chemical compounds or agents that facilitate the incorporation of a compound described herein into cells or tissues.
As used herein, the term "acceptable" with respect to a formulation, composition or ingredient, as used herein, means having no persistent detrimental effect on the general health of the subject being treated.
As used herein, the term "diluent" refers to chemical compounds that are used to dilute a compound described herein prior to delivery. Diluents can also be used to stabilize compounds described herein.
As used herein, the term "effective amount" or "therapeutically effective amount" refer to a sufficient amount of a compound described herein being administered which will relieve to some extent one or more of the symptoms of the disease or condition being treated.
I. Human Protein Kinases
Protein kinases play a central role in the regulation of a wide variety of cellular processes and maintaining control over cellular function. Protein kinases catalyze and regulate the process of phosphorylation, whereby the kinases covalently attach phosphate groups to proteins or lipid targets in response to a variety of extracellular signals. Examples of such stimuli include hormones,
neurotransmitters, growth and differentiation factors, cell cycle events, environmental stresses and nutritional stresses. An extracellular stimulus may affect one or more cellular responses related to cell growth, migration, differentiation, secretion of hormones, activation of transcription factors, muscle contraction, glucose metabolism, control of protein synthesis, and regulation of the cell cycle.
The compounds of the present invention were screened against the kinase panel and inhibited the activity of at least one kinase on the panel. Examples of kinases include, but are not limited to SYK, PYK2, FAK, ZAP70, PIM1, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLKl, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2 kinases and mutant forms thereof. As such, the compounds and compositions of the invention are useful for treating 10 056583
- 36 - diseases or disorders in which such kinases contribute to the pathology and/or
symptomology of a disease or disorder associated with such kinases. Such diseases or disorders include, but are not limited to, pancreatic cancer, papillary thyroid
carcinoma, ovarian carcinoma, human adenoid cystic carcinoma, non small cell lung cancer, secretory breast carcinoma, congenital fibrosarcoma, congenital mesoblastic nephroma, acute myelogenous leukemia, psoriasis, metastasis, cancer-related pain
and neuroblastoma, autoimmune diseases, inflammatory diseases, bone diseases,
metabolic diseases, neurological and neurodegenerative diseases, cancer,
cardiovascular diseases, respiratory diseases, allergies and asthma, Alzheimer's
disease, and hormone related diseases, benign and malignant proliferative disorders, diseases resulting from inappropriate activation of the immune system and diseases
resulting from inappropriate activation of the nervous systems, allograft rejection,
graft vs. host disease, diabetic retinopathy, choroidal neovascularization due to age- related macular degeneration, psoriasis, arthritis, osteoarthritis, rheumatoid arthritis, synovial pannus invasion in arthritis, multiple sclerosis, myasthenia gravis, diabetes mellitus, diabetic angiopathy, retinopathy of prematurity, infantile hemangiomas,
non-small cell lung, bladder and head and neck cancers, prostate cancer, breast
cancer, ovarian cancer, gastric and pancreatic cancer, psoriasis, fibrosis,
atherosclerosis, restenosis, autoimmune disease, allergy, respiratory diseases,
asthma, transplantation rejection, inflammation, thrombosis, retinal vessel
proliferation, inflammatory bowel disease, Crohn's disease, ulcerative colitis, bone
diseases, transplant or bone marrow transplant rejection, lupus, chronic pancreatitis, cachexia, septic shock, fibroproliferative and differentiative skin diseases or
disorders, central nervous system diseases, neurodegenerative diseases, Alzheimer's disease, Parkinson's disease, disorders or conditions related to nerve damage and
axon degeneration subsequent to a brain or spinal cord injury, acute or chronic
cancer, ocular diseases, viral infections, heart disease, lung or pulmonary diseases or kidney or renal diseases and bronchitis.
The compounds described herein are inhibitors of kinase activity and have
therapeutic benefit in the treatment of disorders associated with inappropriate kinase activity, in particular in the treatment and prevention of disease states mediated by kinase. Therefore, the present invention provides methods of regulating, and in particular inhibiting, signal transduction cascades in which a kinase plays a role. The method generally involves administering to a subject or contacting a cell expressing the kinase with an effective amount of a compound described herein, prodrug, or an acceptable salt, hydrate, solvate, N-oxide and/or composition thereof, to regulate or inhibit the signal transduction cascade. The methods are also used to regulate, and in particular inhibit, downstream processes or cellular responses elicited by activation of the particular kinase signal transduction cascade. The methods are also practiced in in vitro contexts or in in vivo contexts as a therapeutic approach towards the treatment or prevention of diseases characterized by, caused by or associated with activation of the kinase-dependent signal transduction cascade.
2. Pharmaceutical Composition
For the therapeutic uses of compounds provided herein, including compounds of Formula (I), or pharmaceutically acceptable salts, solvates, iV-oxides, prodrugs and isomers thereof, such compounds are administered in therapeutically effective amounts either alone or as part of a pharmaceutical composition.
Accordingly, provided herein are pharmaceutical compositions, which comprise at least one compound provided herein, including at least one compound of Formula (I), pharmaceutically acceptable salts and/or solvates thereof, and one or more pharmaceutically acceptable carriers, diluents, adjuvant or excipients. In addition, such compounds and compositions are administered singly or in combination with one or more additional therapeutic agents. The methods of administration of such compounds and compositions include, but are not limited to, intravenous administration, inhalation, oral administration, rectal administration, parenteral, intravitreal administration, subcutaneous administration, intramuscular administration, intranasal administration, dermal administration, topical administration, ophthalmic administration, buccal administration, tracheal administration, bronchial administration, sublingual administration or otic administration. Compounds provided herein are administered by way of known pharmaceutical formulations, including tablets, capsules or elixirs for oral 6583
- 38 - adrninistration, suppositories for rectal administration, sterile solutions or
suspensions for parenteral or intramuscular administration, lotions, gels, ointments
or creams for topical administration, and the like.
The therapeutically effective amount will vary depending on, among others, the disease indicated, the severity of the disease, the age and relative health of the
subject, the potency of the compound administered, the mode of administration and
the treatment desired. The required dosage will also vary depending on the mode of administration, the particular condition to be treated and the effect desired.
Pharmaceutically acceptable salt forms include pharmaceutically acceptable acidic/anionic or basic/cationic salts. Pharmaceutically acceptable acidic/anionic
salts include, acetate, benzenesulfonate, benzoate, bicarbonate, bitartrate, bromide,
calcium edetate, camsylate, carbonate, chloride, citrate, dihydrochloride, edetate,
edisylate, estolate, esylate, fumarate, glyceptate, gluconate, glutamate,
glycollylarsanilate, hexylresorcinate, hydrobromide, hydrochloride,
hydroxynaphthoate, iodide, isethionate, lactate, lactobionate, malate, maleate,
malonate, mandelate, mesylate, methylsulfate, mucate, napsylate, nitrate, pamoate,
pantothenate, phosphate/diphospate, polygalacturonate, salicylate, stearate,
subacetate, succinate, sulfate, hydrogensulfate, tannate, tartrate, teoclate, tosylate,
and triethiodide salts. Pharmaceutically acceptable basic/cationic salts include, the
sodium, potassium, calcium, magnesium, diethanolamine, A½iethyl-.D-glucamme,
-lysine, i-arginine, ammonium, ethanolamine, piperazine and triethanolamine
salts.
A pharmaceutically acceptable acid addition salt is formed by reaction of the free base form a compound of Formula (I) with a suitable inorganic or organic acid
including, but not limitd to, hydrobromic, hydrochloric, sulfuric, nitric, phosphoric, succinic, maleic, formic, acetic, propionic, fumaric, citric, tartaric, lactic, benzoic,
salicylic, glutamic, aspartic, p-toluenesulfonic, benzenesulfonic, methanesulfonic,
ethanesulfonic, naphthalenesulfonic such as 2-naphthalenesulfonic, or hexanoic
acid. A pharmaceutically acceptable acid addition salt of a compound of formula (I) can comprise or be, for example, a hydrobromide, hydrochloride, sulfate, nitrate,
phosphate, succinate, maleate, formarate, acetate, propionate, fumarate, citrate, tartrate, lactate, benzoate, salicylate, glutamate, aspartate, p-toluenesulfonate, benzenesulfonate, methanesulfonate, ethanesulfonate, naphthalenesulfonate (e.g. 2- naphthalenesulfonate) or hexanoate salt.
The free acid or free base forms of the compounds of the invention may be prepared from the corresponding base addition salt or acid addition salt from, respectively. For example a compound of the invention in an acid addition salt form may be converted to the corresponding free base by treating with a suitable base (e.g., ammonium hydroxide solution, sodium hydroxide, and the like). A compound of the
invention in a base addition salt form may be converted to the corresponding free acid by treating with a suitable acid (e.g., hydrochloric acid, etc.).
Prodrug of the compounds of the invention can be prepared by methods known to one of ordinary skill in the art (e.g., see Saulnier et al. , (1994), Bioorganic and Medicinal Chemistry Letters, Vol. 4, p. 1985; the entire teachings of which are incorporated herein by reference).
Protected derivatives of the compounds of the invention can be made by means known to one of ordinary skill in the art. (e.g., see T. W. Greene, "Protecting Groups in Organic Chemistry," 3rd edition, John Wiley and Sons, Inc., 1 99, the entire teachings of which are incorporated herein by reference).
Compounds of the invention can be prepared as their individual stereoisomers by reacting a racemic mixture of the compound with an optically active resolving agent to form a pair of diastereoisomeric compounds, separating the diastereomers and recovering the optically pure enantiomers. (see, Jean Jacques, Andre Collet, Samuel H. Wilen, "Enantiomers, Racemates and Resolutions," John Wiley And Sons, Inc., 1981, the entire teachings of which are incorporated herein by reference)
Compounds of Formula (I) are made by processes described herein and in the Examples. In certain embodiments, compounds of Formula (I) are made by: (a) optionally converting a compound of the invention into a pharmaceutically acceptable salt; (c) optionally converting a salt form of a compound of the invention to a non-salt form; (d) optionally converting an unoxidized form of a compound of the invention into a pharmaceutically acceptable N-oxide; (e) optionally resolving individual isomer of a compound of the invention from a mixture of isomers; (f) optionally converting a non-derivatized compound of the invention into a pharmaceutically acceptable prodrug derivative; and (g) optionally converting a prodrug derivative of a compound of the invention to its non-derivatized form.
The teachings of all patents, published applications and references cited herein are incorporated by reference in their entirety.
EXAMPLES
The present invention is further exemplified by the following examples that illustrate the preparation of compounds of Formula (I) according to the invention. The examples are for illustrative purpose only and are not intended, nor should they be construed as limiting the invention in any manner. Those skilled in the art will appreciate that variations and modifications can be made without changing the scope of the invention.
2010/056583
- 41 - (Method II)
Target Compounds I
It is to be understood that these examples are for illustrative purpose only
and are not to be construed as limiting this invention in any manner. Nuclear magnetic resonance (NMR) and mass spectrometry (MS) spectra obtained for compounds described in the examples below and those described herein were consistent with that of the compounds of formulae herein. Liquid chromatography-mass spectrometry (LC- S) Method:
1. Samples are run on Agilent Technologies 6120 MSD system with a Zorbax Eclipse XDB-C18 (3.5 μ) reverse phase column (4.6 x 50 mm) run at room temperature with flow rate of 1.5 mL/minute.
2. The mobile phase use solvent A (water/0.1 % formic acid) and solvent B (acetonitrile/0.1 % formic acid).
3. The mass spectra (m/z) were recorded using electrospray ionization (ESI). Proton NMR Spectra:
Unless otherwise indicated, all !H NMR spectra are run on a Varian series Mercury 300MHz. All observed protons are reported as parts-per-million (ppm) downfield from tetramethylsilane using conventional abbreviations for designation of major peaks: e.g. s (singlet), d (doublet), t (triplet), q (quartet), m (multiplet) and br (broad).
Preparation of ethyl l-(2-chloro-5-fluoropyrimidin-4-yl)-3-methyl-i//-pyrazole-4- carboxylate: Intermediate 1
To a solution of ethyl 3-methyl- f/-pyrazole-4-carboxylate 2 (3.15 g, 20.5 mmol) in anhydrous acetonitrile were added potassium carbonate (5.7 g, 41 mmol) and 2,4-dichloro-5-fluoropyrimidine 1 at room temperature. The resulting suspension was heated at 80 °C for 3 hours with monitoring a reaction with LC-MS P T/US2010/056583
- 43 - or thin layer chromatography (TLC). It was diluted with ethyl acetate and washed
with brine. The collected organic layer was dried over anhydrous sodium sulfate
and then partially concentrated in vacou. To this, n-hexanes were added to form
pale yellow precipitates. The resulting solids were collected by filtration and rinsed with n-hexanes and then dried with high vacuum to give 4.9 g (85 %) of the target
intermediate 1; MS (ESI) m/z 285 [M+H]+.
Preparation of f 1 -^-chloro-S-fluororiyrimidin^-vn-S-methyl-iJy-pyrazol^- vDmethanol: Intermediate No. 2
To a solution of ethyl l-(2-chloro-5-fluoropyrimidin-4-yl)-3-methyl-ii?-pyi-azole-4- carboxylate 1 (4.9 g, 17.2 mmol) in 60 niL of anhydrous tetrahydrofuran (THF), was slowly added 38 mL (38 mmol) of 1M solution of di-isobutylaluminum hydride
(DIBAL) in toluene with ice bath cooling. After being stirred for 2 hours at the
same temperature, the reaction was quenched by slow addition of lN-NaOH
solution. It was diluted with ethyl acetate and washed with brine. The collected
organic layer was dried over anhydrous sodium sulfate and then partially
concentrated in vacou. To this, n-hexanes were added to form pale yellow
precipitates. The resulting solids were collected by filtration and rinsed with n- hexanes and then dried with high vacuum to give 3.7g (90 %) of Intermediate No. 2;
!H NMR (300MHz, CDC¾) δ 8.57 (1H, d, J= 3.3 Hz), 8.52 (1H, s), 7.94 (1H, s),
4.72 (2H, s); MS (ESI) m/z 243 [M+H]+.
Preparation of methyl l-i5-memyl-2-(3.4,5-trimethoxyphenylammo)pyrimidin-4- yl fl-pyrrole-3-carboxylate: Compound 1
Intermediate 1 Compound 1
A two dram vial was charged with methyl l-(2-chloro-5-methylpyrimidin-4- yl)-7i/-pyrrole-3-carboxylate (Intermediate No. 1) (300 mg, 1.20 mmol), 3,4,5- trimethoxylaniline (240 mg, 1.32 mmol), 540 mg (3.9 mmol) of potassium carbonate, Pd(dppf)Cl2 (50 mg), (±)-2,2'-bis(diphenylphosphino)-l,l'-binaphthyl (BYNAP) (70 mg) and 4 mL of anhydrous dioxane. After being degassed by nitrogen bubbling, the reaction mixture was heated at 100 °C for 4 hours. The resulting insolubles were removed by filtration. The filtrate was concentrated in vacuo and then purified by silica gel chromatography to afford Compound No. 1 as a white solid (2 1 mg, 61 %); MS (ESI) m/z 399 [M+H]+
Preparation of ethyl l-(2-(3.5-dimethylrjhenylamino)pYrimidin-4-yl1-3-methyl-jff- pyrazole-4-carboxylate: Compound 2
Compound 2
To a solution of ethyl 3-methyl-iif-pyrazole-4-carboxylate 2 (5.0 g, 32.4 mmol) in anhydrous acetonitrile (60 mL) were added potassium carbonate (8.96 g, 64.9 mmol) and 4-chloro-2-(methylthio)pyrirnidine 11 (5.47g, 34.1 mmol) at room temperature (rt). The resulting suspension was heated at 80 °C for 8 hours with monitoring a reaction with LC-MS or thin layer chromatography (TLC). It was diluted with ethyl acetate and washed with brine. The collected organic layer was dried over anhydrous sodium sulfate and then concentrated in vacou. The resulting residue was recrystallized with methanol to give 7.88 g (83 %) of ethyl 3-methyl-l- (2-(memyltMo)pyrimidin-4-yl)-2fl-pyrazole-4-carboxylate 12; MS (ESI) m/z 279 [M+H]+ The resulting pyrazole-4-carboxylate 12 (7.44g, 26.7 mmol) was dissolved in 30 mL of DCM and then cooled to 0 °C. To this was added 3-chloroperbenzoic acid (mCPBA, 13.2g, 58.8 mmol) at the same temperature. The reaction was warmed to room temperature, stirred for 2 hours and then quenched by addition of saturated NaHC<¾ solution. The collected organic layer was dried over anhydrous sodium sulfate and then concentrated in vacou. The resulting residue was recrystallized with iso-propylether to give 7.88 g (83 %) of ethyl 3-methyl-l-(2- (methylsulfonyl)pyrimidin-4-yl)-i/i'-pyrazole-4-carboxylate 13 as a coloress solid (6.92g, 83%); m/z 311 [M+H]+. The obtained sulfoxide 13 (3.0 g, 9.7 mmol) was mixed with acetic acid (0.42 mL, 9.7 mmol) and 3,5-dimethylaniline (1.4 mL, 9.7 mmol) in 10 mL of n-butanol. After being heated at reflux for 2 hours, the mixture was concentrated in vacou. The resulting residue was extracted with DCM, washed with a saturated NaHCC solution. The collected organic layer was dried over anhydrous sodium sulfate, concentrated in vacou and then recrystallized with ethyl acetate to afford 0.86 g (26 %) of Compound No. 2 as a pale yellow solid; m/z 352 [M+H]+. l-i2-(3.5-dimethylphenylammo^pyrimidin-4-yl -3-methyl-7J/-pyrazole-4-carboxylic acid: Compound 3
Compound 2 Compound 3
To a solution of Compound No. 2 (0.77 g, 2.2 mmol) in ethanol (10 mL), was added 4 mL of 2N-NaOH solution at room temperature. The reaction mixture was heated at reflux for 2 hours. When no starting material was observed, ethanol was removed in vacuo. The residue was washed with DCM and then the aqueous layer was acidified with 1N-HC1 aqueous solution to form pale yellow precepitates. The resulting solids were collected by filtration and then vacuum dried to give Compound No. 3 as a pale yellow solid (0.41 g, 58%); MS (ESI) m/z 324 [M+H]+. Preparation of l-(2-f3.5-dimemylphenylarmno)-5-fluoropyrimidin-4-yl')-3-methyl-
7jy-Dyrazole-4-carbaldehvde: Intermediate No. 3
Compound 4 Intermediate 3 To a solution of Compound No. 4 (0.56 g, 1.7 mmol) in 30 mL of dichloroethane (DCE), was added Mn<¾ (1.5 g, 10.2 mmol). After being stirred for 4 hours at 60-70 °C, the reaction mixture was passed through a pad of Celite and rinsed with dichloromethane. The filtrate was concentrated in vacuo to give desired Intermediate No. 3 as a pale yellow solid (0.44 g, 80 %); MS (ESI) m/z 326 [M+H]+
Preparation of Amine
Preparation of 2-(4-Ammo-2.6-dimethoxyphenoxy)ethanol
To a solution of 2,6-dimethoxyphenol (1.54 g, 10 mmol) and ethyl bromoacetate (2.00g, 12 mmol) in 15 mL of anhydrous DMF, was added 2.76g (20 mmol) of K2CO3. The reaction mixture was stirred at 30 °C for 20 hours. The mixture was concentrated in vacuo to remove volatiles. The resulting residue was extracted with EtOAc, washed with brine, dried over anhydrous sodium sulfate and then concentrated in vacou to give 2.2 g (91.6%) of ethyl 2-(2,6- dimethoxyphenoxy)acetate. The obtained ester (1.2g, 5 mmol) was dissolved in a suspension of Silica Gel (2.0 g) in 20 mL of DCM. To this was dropwise added of a solution of concentrated HNO3 (20 mL) in 20 mL of DCM at rt. After being stirred at room temperaturet for 1 hour, it was transferred into a separatory funnel and then brown bottom layer was discarded into 1 OOg of ice. The remaining top organic layer was washed with brine, dried over anhydrous sodium sulfate, and then concentrated in vacou to give 1.4 g (98 %) of ethyl 2-(2,6-dimethoxy-4-nitrophenoxy)acetate as a brown solid. The obtained nitrophenoxy ester (1.34g, 4.7 mmol) was dissolved in anhydrous THF (20 mL). To this, was slowly added of 1M DIBAL solution (10.3 mL, 10.3 mmol) in toluene with ice bath cooling. After 1 hou at rt, the reaction was quenched by addition of ΙΝ-NaOH solution, and then extracted with EtOAc. The obtained organic layer was dried over anhydrous sodium sulfate, and passed through Silica Gel pad. The resulting filtrate was concentrated in vacuo to afford 2-(2,6- dimethoxy-4-nitrophenoxy)ethanol (1.01 g, 88%) as a pale yellow solid; MS (ESI) m/z 326 [M+H]+
Preparation of (1 -(2-(3.5-dimethylphenylamino')-5-fluoropyrimidin-4-vn-3-methyl- i/f-pyrazol-4-yl)methanol: Compound No. 4
Intermediate 2
Compound 4
A 40 mL vial was charged with (l-(2-chloro-5-fluoropyrimidin-4-yl)-3- methyl-i -pyrazol-4-yl)methanol (Intermediate No. 2) (0.50 g, 2.1 mmol), 3,5- dimethylaniline (300 mg, 2.4 mmol), 850 mg (6.2 mmol) of potassium carbonate, Pd2(dba)3 (86 mg), (±)-2,2'-bis(diphenylphosphino)-l,l'-binaphthyl (BYNAP) (125 mg) and 25 mL of anhydrous dioxane. After being degassed by nitrogen bubbling, the reaction mixture was heated at 100 °C for 6 hours. The resulting insolubles were removed by filtration. The filtrate was concentrated in vacuo and then purified by silica gel chromatography to afford Compound No. 4 as a white solid (0.56 g, 84 %); MS (ESI) m/z 328 [M+H]+.
Preparation of Compound Nos. 5 to 28
The following compounds of the general structure shown Table 1 were prepared by a method similar to that described for preparation of Compound No. 4 using the appropriate 2-chloropyrimidine and appropriate amine. Examples of palladium catalysts that may be employed in this reaction include Pd(OAc)2, Pd2(dba)3, Pd(dppf)Cl2, or Pd(PPh3)4 and PdCl2(PPh3)2. These catalysts are typically employed with suitable ligand, such as BINAP, Xantphos, S-Phos or a related phosphine-based Pd ligand. The reactions were monitored by TLC and LC- MS analysis and were run at 80 °C to 110 °C for 3 to 16 hours.
Table 1
Compounds of Formula I
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2010/056583
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l-(2-(3.5-dimethylphenylaimno)pyrimidm^
ig-pyrazole-4-carboxamide: Compound No. 29
Compo u nd 3 Com o u nd 29
To a solution of an acid Compound No. 3 (65 mg, 0.2 mmol) in 2 mL of
anhydrous DMF and DIPEA (100 μΙ_, 0.6 mmol), was added HBTU (83 mg, 0.22
mmol). The mixture was stirred for 15 minute at room temperature. To this was
added, 2-(methylamino)ethanol (24 mL, 0.3 mmol) at room temperature. The
reaction mixture was stirred at room temperature for 3 hours with monitoring a
reaction with TLC. When no starting material was observed, the reaction mixture
was diluted with ethyl acetate and washed with ΙΝ-NaOH followed by brine. The
collected organic layer was dried over anhydrous sodium sulfate and then
concentrated in vacou and then purified by silica gel chromatography to give 53 mg
(70 %) of target Compound No. 29 as a white solid; Ή NMR (400MHz, DMSO-d6) δ 9.66 (s, IH), 8.61 (s, IH), 8.54 (d, 7= 5.2Hz, IH), 7.19 (d, J= 5.2Hz, \H), 6.65
(s, IH), 4.82 (br s, IH), 3.56-3.48 (m, 2H), 3.14-2.95 (m, 2H), 2.31 (s, 3H), 2.26 (s,
6H); MS (ESI) mJz 381 [M+H]+. Preparation of Compound Nos, 30 to 38
The following compounds of the general structure shown Table 2 were prepared by a method similar to that described for preparation Compound No. 29 using coupling agent such as EDCI, HBTU, HATU, PyBop, or PyBrop. The reactions were monitored by TLC and LC-MS analysis and were run at room temperature 3 to 16 hours.
Table 2
Compounds of Formula I
T/US2010/056583
-55- 37 iV-benzyl- 1 -(2-(3 ,5-dimethoxyphenyl 449 amino)-5-fluoropyrimidin-4-yl)-ii/- pyrazole-4-carboxamide
38 (R)-( 1 -(2- (3 , 5 -dimethylphenylamino)- 411
L II ..
5-fiuoropyrimidiri-4-yl)-3-methyl-li?-
A cr" pyrazol-4-yl)(3 -hydroxypyrrolidin- 1 - yl)methanone
2-((l-(2-(3,5-dime ylphenylamino)-5-fluoropyrim^
4-yl)memylamino)ethanol: Compound No. 39
Method I
A solution of Intermediate No. 3 (65 mg, 0.2 mmol) and ethanolamine (18 μΐ,, 0.3 mmol) in 2 mL of dichloromethane was stirred for 20 minutes at room temperature. To this, was added NaBH(OAc (64 mg, 0.3 mmol) at room temperature. The reaction was stirred for 15 hour at room temperature and then quenched with ΙΝ-NaOH. It was extracted with ethyl acetate and washed twice with brine. The collected organic layer was dried over anhydrous sodium sulfate and then partially concentrated in vacou. The resulting residue was purified by silica gel chromatography to afford desired Compound No. 39 as a white solid (59 mg, 74 %); 'H NMR (300MHz, CDC13) δ, 8.38-8.40 (2H, m), 7.26 (1H, s), 6.67 (1H, s), 3.78 U 2010/056583
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(2H, s), 3.70 (t, = 5.1Hz, 2H), 2.81 (t, J= 5.1Hz, 2H), 2.36 (3H, s), 2.29 (6H, s);
MS (ESI) w z 371 [M+H]+.
Method II
2-(4-((4-methyl-l- 5-methyl-2-(3,4,5-trimethoxYphenylamino)pyrirriidin-4- yl)-i-g-pyrrol-3-yl)methyl)piperazui-l-yl)ethanol: Compound 40
intermediate 5 Compou nd 40
To a solution of Intermediate No. 2 (0.70 g, 2.92 mmol) in 30 mL of
dichloroethane (DCE), was added MnCh (2.67 g, 17.5 mmol). After being stirred
for 4 hours at 70 °C, the reaction mixture was passed through a pad of Celite and
rinsed with dichloromethane. The filtrate was concentrated in vacuo to give a
desired Intermediate No. 4 as a pale yellow solid (0.6 g, 87 %). A solution of
Intermediate No. 4 (311 mg, 1.32 mmol) and 2-(piperazin-l-yl)ethanol (0.23 g, 1.77 mmol) in 10 mL of dichloromethane (DCM) was stirred for 20 minutes at room
temperature. To this, was added NaBH(OAc)3 (0.58 g, 2.6 mmol) at room
temperature. The reaction was stirred for 3 hours at room temperature and then
quenched with I -NaOH. It was extracted with ethyl acetate and washed twice with 10 056583
- 58 - brine. The collected organic layer was dried over anhydrous sodium sulfate and then concentrated in vacou. The resulting residue was purified by silica gel
chromatography to afford desired intermediate No. 5 as a white solid (0.42 mg,
91 %). A 2 dram vial was charged with 2-(4-((l-(2-chloro-5-methylpyrimidin-4-yl)- 5 4-methyl-7 /-pyrrol-3-yl)methyl)piperazin-l-yl)ethanol (Intermediate No. 5) (70 mg,
0.2 mmol), 3,4.5-trimethoxyaniline (48 mg, 0.26 mmol), 83 mg (0.6 mmol) of
potassium carbonate, Pd(dppf)Ci2 (8 mg), BYNAP (12 mg) and 3 mL of anhydrous dioxane. After being degassed by nitrogen bubbling, the reaction mixture was
heated at 100 °C for 16 hours and cooled to room temperature. The resulting
10 insolubles were removed by filtration and then the fdtrate was concentrated in vacuo.
The resulting dark brown residue was purified by silica gel chromatography (5 to 15%
MeOH/DCM) to afford desired Compound 40 as a pale yellow solid (74 mg, 75 %);
'H MR (300MHz, CDC13) δ 9.43 (s, 1H), 8.34 (s, 1H), 7.39 (s, 1H), 7.30 (s, 1H),
7.18 (s, 2H), 3.77 (s, 9H), 3.61 (s, 2H), 3.45 (m, 2H), 3.21 (m, 2H), 2.38-2.32 (m,
15 8H), 2.19 (s, 3H), 2.03 (s, 3H); MS (ESI) m/z 497 [M+H]+
Preparation of Compound Nos. 41 to 139
The following compounds of the general structure shown Table 3 were
prepared by a method I similar to that described in the preparation of Compound No.
20 39 using the appropriate aldehyde Intermediate No. 3 and appropriate amine
HNR5R6 or method II similar to that described in the preparation of Compound No.
40 using the appropriate 2-chloropyrimidine Intermediate No.5 and appropriate
amine H2NR2.
25 1 -((4-methyl-l -(5-methyl-2-(3.4.5-trimethoxyphenylaminoteyrimidin-4-yl)-ifj- pyrrol-3-vDmethv azetidin-3-yl pivalate: Compound No. 93
Compound 91 Compound 93
To a solution of l-((4-methyl-l-(5-methyl-2-(3,4,5- trimethoxyphenylamino)pyrirnidin-4-yl)-7 i-pyrrol-3 -yl)methyl)azetidin-3 -ol (compound No. 91, 150 mg, 0.34 mmol ) in 2 mL of anhydrous DMF, were added 5 mg (DMAP) and trimethylacetic anhydride (128 mg, 0.68 mmol) at rt. After being stirred for 16 hours at room temperature, the reaction mixture was concentrated in vacuo. The resulting residue was extracted with EtOAc, washed with 2N-NaOH, dried over anhydrous Na2SC>4, concentrated in vacuo and then purified by chromatography (5 to 15% MeOH/DCM) to afford desired Compound No. 93 as a colorless solid (98 mg, 55 %); Ή NMR (300MHz, CDC13) δ, 9.44 (s, IH), 8.35 (2, IH), 7.37 (s, IH), 7.30 (s, IH), 7.19 (s, 2H), 4.88-4.94 (m, IH), 3.78 (s, 6H), 3.76 (m, IH), 3.61 (s, 3H), 3.57-.60 (m, 3H), 2.92 (m, 2H), 2.32 (s, 3H), 2.01 (s, 3H), 1.14 (s, 9H); MS (ESI) m/z 524 [M+H]+
4-(3-((1.4-diazepan-l-vnmethyl)-4-methyl-iff-pyrrol-l-ylV5-methyl-N-i3.4.5- trimethoxyDhenyl)pyrimidin-2-amine: Compound No. 96
Intermediate 3 Compound 96 A solution of Intermediate No. 3 (200 mg, 0.52 mmol) and ferf-butyl 1,4- diazepane-l-carboxylate (181 μL, 78 mmol) in 4 mL of dichloromethane was stirred for 20 minutes at room temperature. To this, was added NaBH(OAc)3 (230 mg, 1.0 mmol) at room temperature. The reaction was stirred for 4 hours at room temperature and then quenched with lN-NaOH. It was extracted with ethyl acetate and washed twice with brine. The collected organic layer was dried over anhydrous sodium sulfate and then concentrated in vacou. The resulting residue was purified by silica gel chromatography to afford Boc protected Compound No. 96 as a pale yellow solid (241 mg, 82 ). The obtained compound was dissolved in 3 mL of methanol. To this, was added 2.5 mL of 4M-HC1. After being stirred for 6 hours at room temperature, the reaction mixture was partially concentrated in vacuo and then added EtOAc to form precipitation. The resulting yellow solids were collected by filtration and rinsed with EtOAC to give Compound No. 96 (230 mg, 94%) as a trishydrochloride salt; 'H NMR δ 11.13 (br s, 1H), 9.56 (s, 1H), 8.43 (s, 1H), 7.83 (s, 1H), 7.44 (s, 1H), 7.19 (s, 2H), 4.20 (m, 2H), 3.78 (s, 6H), 3.61 (s, 3H), 3.40-3.52 (m, 10H), 2.36 (s, 3H), 2.13 (s, 3H); MS (ESI) m/z 467 [M+H]+
4- 3-( 1.4-άίΕΖ6Ρ8η-1-ν1 ΐΏ6υιν1)-4^6Φν1-;,Η-ρνιτο1-1-ν1 -5^ηιν1-Ν- 3.4.5- trimethoxyphenyl)pyrimidin-2 -amine: Compound No. 97
Compound 96 Compound 97
To a solution of Compound No. 96 (42 mg, 0.07 mmol ) in 1 mL of acetonitrile and diisopropylethylamine (83 were added catalytic amount οΐΝ,Ν- dimethylaminopyridine and trimethylacetic anhydride (28 μΕ, 0.14 mmol) at rt. After being stirred for 16 hours at room temperature, the reaction mixture was concentrated in vacuo. The resulting residue was extracted with EtOAc, washed U 2010/056583
- 61 - with 2N-NaOH, dried over anhydrous sodium sulfate, concentrated in vacuo and
then purified by chromatography (5 tol5% MeOH/DCM) to afford desired
Compound No. 97 as a colorless solid (29 mg, 72 %); ¾ NMR (300MHz, CDC13) δ,
9.44 (s, 1H), 8.35 (s, 1H), 7.38 (s, 1H), 7.31 (s, 1H), 7.19 (s, 2H), 3.77 (s, 6H), 3.61
(s, 3H), 3.49-3.52 (m, 6H), 2.73 (m, 2H), 2.33 (s, 3H), 2.04 (s, 3H), 1.76 (m, 2H),
1.18 (s, 9H); MS (ESI) m/z 551 [M+H]+.
Table 3
Compounds of Formula I
56583
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10056583
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0056583
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BIOLOGICAL ASSAYS
1. Kinase Inhibition Assay
Compounds of the present invention were tested for their capacity to inhibit a kinase panel which includes, but are not limited to, spleen tyrosine kinase (SYK), zeta-chain-associated protein kinase 70 (ZAP70), PTK2B protein tyrosine kinase 2 (PY 2), foeal adhesion kinase (FAK), provirus integration of maloney kinase 1 (ΡΓΜ1), rearranged during transfection kinase (RET), Fms-like tyrosine kinase 3 (FLT3), Janus kinase 2 (JAK2), and leucine-rich repeat kinase 2 (LRRK2).
FLT3 is a member of the type III receptor tyrosine kinase (RTK) family.
The ligand for FLT3 is expressed by the marrow stromal cells and other cells and synergizes with other growth factors to stimulate proliferation of stem cells, progenitor cells, dendritic cells, and natural killer cells. FLT3 has been implicated in hematopoietic disorders which are pre-malignant disorders including myeloproliferative disorders, such as thrombocythemia, essential thrombocytosis (ET), angiogenic myeloid metaplasia, myelofibrosis (MF), myelofibrosis with myeloid metaplasia (MMM), chronic idiopathic myelofibrosis (IMF), and polycythemia vera (PV), the cytopenias, and pre-malignant myelodysplastic syndromes. Hematological malignancies include leukemias, lymphomas (non- Hodgkin's lymphoma), Hodgkin's disease (also called Hodgkin's lymphoma), and myeloma-for instance, acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), acute promyelocytic leukemia (APL), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), chronic neutrophilic leukemia (CNL), acute undifferentiated leukemia (AUL), anaplastic large-cell lymphoma (ALCL), prolymphocytic leukemia (PML), juvenile myelomonocycfic leukemia (JMML), adult T-cell ALL, AML with trilineage myelodysplasia (AML/TMDS), mixed lineage leukemia (MLL), myelodysplastic syndromes (MDSs), myeloproliferative disorders (MPD), multiple myeloma, (MM) and myeloid sarcoma.
RET is the receptor for members of the glial cell line derived neurotrophic factor (GDNF) family of extracellular signalling molecules (GFL's). RET signal transduction is central to the development of normal kidneys and the enteric nervous system. RET loss of function mutations are associated with the development of Hirschsprung's disease, while gain of function mutaions are associated with development of various types of cancer, including medullar thyroid carcinoma and multiple endocrine neoplasias type II and III. 2010/056583
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Spleen tyrosine kinase (SYK) is a member of the SYK family of tyrosine
kinases which are non-receptor cytoplasmic tyrosine kinases sharing a characteristic dual SH2 domain separated by a linker domain. SYK plays a role in transmitting
signals from a variety of cell surface receptors including CD74, Fc Receptor, and
integrins. Abnormal function of SYK has been implicated in instances of
hematopoeitic malignancies. Several transforming viruses, such as Epstein Barr
virus, bovine leukemia virus, and mouse mammary tumor virus, are known to
contain "Immunoreceptor Tyrosine Activation Motifs" (ITAMs) that lead to
activation of SYK.
ZAP70 is an enzyme that belongs to the protein tyrosine kinase family, and it plays a role in thymocyte development, T-cell development, and lymphocyte
activation. ZAP70 is phosphorylated on tyrosine residues upon T-cell antigen
receptor (TCR) stimulation and functions in the initial step of TCR-mediated signal transduction in combination with the Src family kinases, Lck and Fyn. Mutations in this gene cause selective T-cell defect, a severe combined immunodeficiency disease characterized by a selective absence of CD8-positive T-cells.
PYK2 is a cytoplasmic protein tyrosine kinase involved in calcium-induced regulation of ion channels and activation of the map kinase signaling pathway. The encoded protein may represent an important signaling intermediate between
neuropeptide-activated receptors or neurotransmitters that increase calcium flux and the downstream signals that regulate neuronal activity. The encoded protein
undergoes rapid tyrosine phosphorylation and activation in response to increases in the intracellular calcium concentration, nicotinic acetylcholine receptor activation, membrane depolarization, or protein kinase C activation. Its activation is highly
correlated with the stimulation of c-Jun N-terminal kinase activity. PYK2 is
implicated in diseases such as osteoporesis, artiritis, myeloid leukemia, hypo- osmolality, sarcoma, blast crisis, glioma, erythroleukemia, and cancer.
FAK (encoded by the gene PTK2) is a non-receptor tyrosine kinase that
integrates signals from integrins and growth factor receptor. FAK plays a role in the regulation of cell survival, growth, spreading, migration and invasion and is
regulated and activated by phosphorylation on multiple tyrosine residues. Overexpression of FAK mR A and/or protein has been implicated in cancers of the breast, colon, thyroid, and prostate. Phosphorylation of FAK is increased in malignant tissues.
JAKl is a member of the protein-tyrosine kinase (PTK) family and characterized by the presence of a second phosphotransferase-related domain immediately N-terminal to the PTK domain. JAKl is involved in the interferon- alpha beta and -gamma signal transduction pathways. The reciprocal interdependence between JAKl and TYK2 activities in the interferon-alpha pathway, and between JAKl and JAK2 in the interferon-gamma pathway may reflect a requirement for these kinases in the correct assembly of interferon receptor complexes.
JAK2 has been implicated in signaling by members of the type II cytokine receptor family (e.g. interferon receptors), the GM-CSF receptor family (IL-3R, IL- 5R and GM-CSF-R), the gpl30 receptor family (e.g. IL-6R), and the single chain receptors (e.g. Epo-R, Tpo-R, GH-R, PRL-R). JAK2 gene fusions with the
TEL(ETV6) (TEL-JAK2) and PCM1 genes have been associated with leukemia. Further, mutations in JAK2 have been implicated in polycythemia vera, essential thrombocythemia, and other myeloproliferative disorders. This mutation, a change of valine to phenylalanine at the 617 position, renderd hematopoietic cells more sensitive to growth factors such as erythropoietin and thrombopoietin.
JAK3 is a tyrosine kinase of the Janus family. JAK3 is predominantly expressed in immune cells and transduces a signal in response to activation via tyrosine phosphorylation by interleukin receptors. Mutations that abrogate JAK 3 function cause an autosomal severe combined immunodeficiency disease (SCID). Mice that do not express JAK3 have T-cells and B-cells that fail to respond to various cytokines. Since JAK3 expression is restricted mostly to hematopoietic cells, its role in cytokine signaling is thought to be more restricted than other JAKs. JAK3 is involved in signal transduction by receptors that employ the common gamma chain (yC) of the type I cytokine receptor family (e.g. IL-2R, IL-4R, IL-7R, IL-9R, IL-15R, and IL-21R). Provirus Integration of Maloney Kinase (PIM-Kinase) was identified as one of the frequent proto-oncogenes capable of being transcriptionally activated by Maloney retrovirus integration event in mice, causing lymphomas in affected mice. PIM 1 , 2 and 3 are serine/threonine kinases normally function in survival and proliferation of hematopoietic cells in response to growth factors and cytokines. Transgenic mice overexpressing PIMl or PIM2 show increased incidence of T-cell lymphomas, while overexpression in conjunction with c-myc is associated with incidence of B-cell. Aberrent PIM expression has been reported in many human malignancies including prostate cancer, hepatocellular carcinoma, and pancreatic cancer. PIM kinases are involved in the early differentiation process of Helper T- cells, which coordinate the immunological response in autoimmune diseases, allergic reaction and tissue transplant rejection. In addition to a potential role in cancer treatment and myeloproliferative diseases, an inhibitor of PIM can be useful to control expansion of immune cells in other pathologic condition such as autoimmune diseases, allergic reactions and in organ transplantation rejection syndroms.
METHODS
Inhibition of SYK. ZAP70. PYK2. FAK, PIMl, RET. FLT3. JAK2 and LRRK2 kinase activity
Compounds of the invention were initially diluted to lOmM in 100% DMSO (CALBIOCHEM™) for storage and made into kinase buffer solution to create a compound concentration ranging from luM and lOuM. Serial dilutions of compounds of the invention were dispensed into a 96-well plate (GREINER BIOSCIENCES™) at 6uL each. Purified full-length human SYK, ZAP70, PIMl , PYK2 and truncated human FAK, RET, FLT3, JAK2, and LRRK2 (CARNA BIOSCIENCES™) were diluted in kinase buffer and added to the compound solutions and pre-incubated for 30 minutes at room temperature (1 hour for PYK2). Next, ATP (TEKNOVA™) and substrate solution (suggested manufacture substrates of PerkinElmer™, for example, Ulight™-TK peptide for SYK, Ulight™-PolyGT for ZAP70, FAK, and PYK2, and Ulight™-CREBtide for PIMl (PERKINELMER™)) was added (12uL each) to the wells containing the compound solution and enzyme. The reaction mixture was incubated for 1 hour (2 hours for PYK2). Following the incubation, the stop solution made with EDTA, water, and Lance detection buffer (PERKINEL ER™) was added (12μΙ, each) to stop phosphorylation. Following the addition of the stop solution and 5 minutes of shaking, the detection solution containing the Europium-labeled antibody (suggested manufacture substrates of PerkinElmer™, for example, PT66 for SYK, ZAP70, PYK2, and FAK, and Anti- Creb for PIM1), water, and Lance detection buffer was added (12μΕ each) to the reaction mixture and incubated again for 50 minutes. Substrate phosphorylation was a function of the 665nm emission measured following the addition of the detection solution and 50 minutes of incubation. The IC50 value of test compound was calculated at Gradpad Prism 5 unless specified otherwise.
RESULTS
Compounds of Formula (I) exhibited useful pharmacological properties. As used herein, zero % inhibition indicates no inhibition on the kinase activity (e.g., as seen in control treated with no inhibitor), whereas 100% inhibition indicates complete inhibition of the kinase activity.
Compounds of Formula (I) exhibited various levels of inhibition of the protein kinases on the panel. Certain compounds exhibited percentage inhibition of greater than 80% against one or more of the kinase at 1 μΜ concentration as shown in Table 2.
For example, Compound 21 of Formula (I), namely, (4-methyl-l-(5-methyl- 2-(3,4,5-trimethoxyphenylammo)pyrimidin-4-yl)-i7i-pyrrol-3-yl)methanol, was shown to inhibit the kinase activity of SYK (96.4 %), Zap70 (54.6 %), PYK2
(78.2 %), FAK (70.7 %) and ΡΓΜ1 (71.2 %), LRRK2 (93%) at a concentration of 1 μΜ and that of FLT3 (IC50, 1.9nM), RET (IC50, 50 nM), KIT (137 nM) and JAK2 (IC50 7.7nM; see Table 2). Table 2 illustrates the percentage / molar inhibition of SYK, ZAP70, PYK2, FAK, PIM1 , RET, FLT3, JAK2 and LRRK2 by the representative compounds of Formula (I). Two known kinase inhibitors, R406 and staurosporine, were used as positive controls. 3
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Table 2
Inhibition of Various Kinases
* n.d., not determined
2. Tumor Necrosis Factor (TNF)-a Release Assay
Compounds of the present invention are tested for their effects on TNF-a
release in human acute monocytic leukimia cell line (THP-1) to illustrate potential
efficacy at the cellular level. TNF-a is a cytokine involved in systemic
inflammation and is a member of a group of cytokines that stimulate the acute phase 2010/056583
- 90 - reaction. The primary role of TNF-a is in the regulation of immune cells. TNF-a is known to induce apoptotic cell death and inflammation and to inhibit early
tumorigenesis and viral replication. Dysregulation and, in particular, overproduction of TNF-a have been implicated in a variety of human diseases, autoimmune disease, inflammation, arthritis and cancer.
Production or release of TNF-a is controlled by type of stimulus to which
the cell responds. SYK activity is involved in mediating TNF-a production. When stimulated by IgG, cells increase TNF-a production in a SYK dependent manner
(i.e., the SYK dependent pathway). However, when stimulated by
lipopolysaccharide (LPS), they produce TNF-a in a SYK independent manner.
METHODS
Compounds of the invention were tested for their TNF-a release effect on
THP-1 cells. For SYK dependent TNF-a release assay (i.e., via IgG stimulation),
THP-1 cells derived from human monocytic cells were obtained from the American
Type Culture Collection (ATCC, Manassas, VA). This cell line was maintained
with an Roswell Park Memorial Institute (RPMI) medium (GIBCO™) containing 10 fetal bovine serum (FBS; GIBCO™) and 0.05 mM 2-mercaptoethanol. The THP-1 cells were seeded at lx 105 cells/100 μΤ/well into human IgG (^g/well,
TNVITROGEN™)-coated 96 well culture plate, and serially diluted compound was then added. After an 18-hour incubation period at 37°C, supematants were collected for the determination of the TNF-a level by enzyme-linked immunosorbent assay
(ELISA), and the remaining cells were subjected to an MTT (yellow tetrazolium
salt) assay to determine the cytotoxic effects of compound.
For SYK independent TNF-a release assay (i.e., via lipopolysaccharide
(LPS)- stimulation), THP-1 cells derived from human monocytic cells were obtained from the American Type Culture Collection (ATCC, Manassas, VA). This cell line was maintained with an RPMI medium (GIBCO™) containing 10 fetal bovine
serum (FBS, GIBCO™) and 0.05 mM 2-mercaptoethanol. The THP-1 cells were
seeded at lx 105 cells/100 μΐ, /well into 96-well culture plates, and treated with
lipopolysaccharide (1 μg/ml), and serially diluted compound was then added. After 2010/056583
- 91 - an 18-hour incubation period at 37°C, supernatants were collected for the
determination of the TNF-a level by ELISA, and the remaining cells were subjected to an MTT assay to determine the cytotoxic effects.
RESULTS
Compounds of Formula (I) exhibited useful pharmacological properties. As used herein, control used without the presence of an inhibitor indicates zero %
inhibition of TNF-a release.
Certain compounds of Formula (I) exhibited a percentage inhibition of
greater than 50 % at 0.3 μΜ concentration in a SYK dependent manner (e.g., IgG
stimulation). Specifically, at 0.3 μΜ concentration, Compounds Nos. 82, 132, and
133 of the present invention exhibited a percentage inhibition greater that those
exhibited by 406, a widely known kinase inhibitor, in SYK dependent TNF-a
release assay (i.e., IgG stimulated release).
For example, Compound No. 133 of Formula (I), ( ϊ)-1-((1 -(2-(3,5- dimemylphenylamino)-5-fluoropyrimidm-4-yl)-^
ol, showed a greater percentage inhibition of TNF-a release at a concentration of 0.3 μΜ as compared with those exhibited by R406. The percentage inhibition data of
the representative compounds of Formula (I) of the present invention is shown in
Table 3.
Table 3
TNF-a Release Inhibition
IgG stimulation LPS stimulation
Compound no. At 0.3 μΜ At 1 μΜ At 0.3 μΜ At 1 μΜ
77 35.3 % 69.5 % 42.2 % 36.0 %
80 51.5 % 91.1 % 8.2 % 12.5 %
82 49.2 % 91.4 % 18.1 % 21.5 %
132 85.9 % 94.5 % 3.1 % 8.2 %
133 86.3 % 99.4 % 13.8 % 14.2 % R406 49.9 % 87.4 % n.d. n.d.
Dexamethasone n.d. n.d. n.d. 68.4%
3. Cell Viability Assay: RET Inhibition
Compounds of the invention were tested for their effects on cell viability in various human cancer cell lines such as MTC-TT to illustrate efficacy of the invention.
The RET proto-oncogene encodes a receptor tyrosine kinase for members of the glial cell line-derived neurotrophic factor family of extracellular signaling molecules. RET loss of function mutations are associated with Hirschsprung's disease, while gain of function mutations are implicated in the development of various types of human cancer, including medullary thyroid carcinoma, multiple endocrine neoplasias type 2A (MEN2A) and 2B (MEN2B), phaeochromocytoma and parathyroid hyperplasia.
METHODS
To address RET dependent cell viability, the medullary thyroid carcinoma cell line, MTC-TT representing MEN2A was utilized to test compounds of the present invention. MTC-TT were cultured at RPMI containing 15 bovine calf serum (Hyclon™ of Thermo™) and supplemented with 2mM L-Glutamine. The cells were grown at a density of 5x104 cells/1 ΟΟμΤΛνβΙΙ in duplicate in 96-well plates for one day and treated with different concentrations of test compound. Cell viability for MTC-TT two days after drug treatment was measured by Cell Titer 96 Aqueous One Solution Reagent (Promega™) according to the manufacture instructions.
RESULTS
As used herein, control used without the presence of an inhibitor indicates 50 inhibition concentration (IC50) of cell viability.
Compounds of Formula (I) exhibited an inhibition range greater than 100 nM at IC50 concentration. Specially, Compounds 40 and 121 exhibited an inhibition level greater than those exhibited by Vandetinib and Sunitinib, widely known kinase inhibitors, in RET induced cancer cell line.
For example, Compound 121 of Formula (I), 2-(4-(4-(3- ((dimethylarnmo)methyl)-4-memyl-i.ff-pyro
2,6-dimethylphenoxy)ethanol, (see table 4) exhibited >2 time higher inhibition in IC50 measurement than those appeared by Vandetanib (AstraZeneca™) and Sunitinib (Pfizer™), which are an antagonist of the vascular endothelial growth factor receptor (VEGFR) and the epidermal growth factor receptor (EGFR). The IC50 inhibition data of the representative compounds of Formula (I) of the present invention is shown in Table 4.
Table 4
Cell Viability
4. Cell Viability Assay: Inhibition of FLT3-ITD-Positive Cells
Compounds of the invention were tested for their effects on inhibition of
FLT3-ITD in human acute leukemia cell line (MV4-11). FLT3 is primarily expressed in immature hematopoietic progenitor as well as in mature myeloid cells. It belongs to type III receptor tyrosine kinase (RTK) family including KIT, FMS, and PDGFR. It is activated by binding to FL, which leads to increased kinase activity and activation of downstream signaling pathway including STAT5, Ras, and PI3 Kinase.
The FLT3-ITD (Internal Tandem Duplication) mutations in the juxtamembrane domain are the most frequently observed molecular defect in acute myelogenous leukemia (AML). FLT3-ITD induces ligand-independent dimerization, autophosphorylation and constitutive activation, and is able to transform hematopoietic cells. Clinically, FLT3-ITD is known to increased leukocytosis, increased blast count, increased relapse rate, decreased disease-free survival, and poor overall survival. Therefore, FLT3-ITD is an attractive molecular target for AML therapy.
METHODS
Compounds of the invention were tested for cell viability effect on MV4-11 cells. For cell viability assay, MV4-11 cells expressing human FLT3-ITD were obtained from the American Type Culture Collection (ATCC, Manassas, VA). This cell line was maintained with an Roswell Park Memorial Institute (RPMI) medium (HyClone™) containing 10 bovine calf serum (BCS; Hyclone™) supplemented iron. The MV4- 11 cells were seeded at 2x 104 cells in 96-well culture plates, and serially diluted compound was then added. After a 72-hour incubation period at 37°C, cell viability was measured using the ATPLite lstep assay (Perkin-Elmer™) that is based on the quantification of ATP from viable cells. CellTiter Aqueous assay (Promega™) was also performed in parallel as an orthogonal assay. IC5o values were calculated using nonlinear regression and defined as the concentration needed for a 50 reduction in luminescence or absorbance treated versus untreated control cells (Prism™ Software).
RESULTS
Compounds of Formula (I) exhibited an inhibition of greater than 10 tiM at IC50 concentration. Specially, Compounds 91 and 93 exhibited an inhibition level greater than those exhibited by Vandetinib and Sunitinib in FLT3 ITD induced cancer cell line.
For example, Compound 93, l-((4-methyl-l-(5-methyl-2-(3,4,5- trimethoxyphenylamino)pyrimidin-4-yl)-i /-pyrrol-3-yl)methyl)azetidin-3-yl pivalate, exhibited more than 6 time higher inhibition in IC50 than those of
Sunitinib (Pfizer) and PKC-412(Novartis), widely known antagonists of the vascular endothelial growth factor receptor (VEGFR) and the epidermal growth factor receptor (EGFR). The IC50 inhibition data of the representative compounds of Formula (I) (e.g., Compound 91, 93, 96 and 97) are shown in Table 5.
Table 5
Viability of FLT3-ITD Induced Cancer Cell Line
5. Cell Viability Assay: JA 2 Inhibition
Compounds of the invention are tested for their effects on JAK2 inhibition in human erythroleukemic cell line (HEL) to illustrate potential efficacy at the cellular level. The Janus-associated kinase (JAK) family, comprised of four different protein tyrosine kinases JAK1, JAK2, JAK3, and TYK2, plays an important role in cellular survival, proliferation, and differentiation. V617F, a unique mutation in the JAK2 gene (a valine-to-phenylalanine substitution) results in constitutive kinase activity and promotes deregulated hematopoiesis. JAK2 V617F is frequently detected in myeloproliferative disorders (MPDs), a group of clonal hematopoietic stem cell disorders that include polycythemia vera (PV), essential thrombocythemia (ET), and idiopathic myelofibrosis (IMF), all of which have the potential to transform to acute myeloid leukemia. JAK2 V617F is constitutively phosphorylated and able to activate downstream signaling in the absence of cytokine stimulation.
JAK2 is also a key mediator of signaling, downstream of a variety of cytokine and growth factor receptors. In particular, JAK2 phosphorylate the signal transducers and activators of transcription (STAT) family of proteins. Once phosphorylated, STATs dimerize and translocate to the nucleus where they bind DNA and regulate expression of target genes. JAK2/STAT signaling has been implicated in driving both cell cycle regulation and anti-apoptotic pathways. METHODS
Compounds of the present invention were tested for their effects on viability of HEL cells. For cell viability assay, HEL cells expressing human JAK2 V617F were obtained from the American Type Culture Collection (ATCC, Manassas, VA). This cell line was maintained with Roswell Park Memorial Institute (RPMI) medium (HyClone™) containing 10 bovine calf serum (BCS; Hyclone™) supplemented iron. The HEL cells were seeded at 2x 104 cells in 96 well culture plates, and serially diluted compound was then added. After a 72-hour incubation period at 37°C, viability of cells was measured using the ATPLite lstep assay (Perkin-Elmer™) that is based on the quantification of ATP from viable cells. CellTiter Aqueous assay (Promega™) was also performed in parallel as an orthogonal assay. IC50 values were calculated using nonlinear regression and defined as the concentration needed for a 50 reduction in luminescence or absorbance treated versus untreated control cells (Prism™ Software).
RESULTS
Compounds of Formula (I) exhibited an inhibition of greater than 10 nM at IC50 concentration. Specifically, compounds 21 and 24 exhibited an inhibition level greater than those exhibited by Sorafenib (Bayer), a known kinase inhibitor of Raf, VEGFR and PDGFR in cancer cell lines.
For example, Compound 21, (4-methyl-l-(5-methyl-2-(3,4,5- trimemoxyphenylamino)pyrimidin-4-yl)-7ii-pyrrol-3-yl)methanol, (see table 6, compound 139) exhibited about 10 time higher inhibition in IC50 measurement than those by Sorafenib (Bayer). The IC50 inhibition data of the representative compounds of Formula (I) is shown in Table 6.
Table 6
Cell Viability: JAK2 kinase Inhibition
6. In Vitro Kinase Inhibition
Up to 518 different kinases have been identified in humans. To determine the scope of inhibitory effects of a representative compound of Formula (I) on known kinases, Compound 82 was tested against 104 commercially available kinases (Ambit Biosciences™). 104 kinases included ABL1(E255K)- phosphorylated, ABLl(T315I)-phosphorylated, ABLl-phosphorylated, ACVRIB, ADCK3, AKT1, AKT2, ALK, AUR A, AURKB, AXL, BMPR2, BRAF, BRAF(V600E), BTK, CDKl 1 , CDK2, CDK3, CDK7, CDK9, CHEKl, CSF1R, CSNK1D, CSNK1G2, DCAMKLl, DYRK1B, EGFR, EGFR(L858R), EPHA2, ERBB2, ERBB4, ERK1, FAK, FGFR2, FGFR3, FLT1, FLT3, FLT4, GSK3B, IGF1R, ΙΚΚ-α, ΙΚΚ-β, INSR, JAK2(JH1 domain-catalytic), JAK3(JH1 domain- catalytic), J K1, J K2, JNK3, KIT, KIT(D816V), KIT(V559D,T670I), LKBl, LRRK2, LRRK2(G2019S), MAP3K4, MAPKAPK2, MARK3, MEK1, MEK2, MET, MKNK1, MKNK2, MLK1, MTOR, p38-alpha, p38-beta, PAK1, PAK2,
PAK4, PCTKl, PDGFRA, PDGFRB, PDPKl, PIK3C2B, PIK3CA, PIK3CG, PMl, ΡΓΜ2, PIM3, PKAC-alpha, PLK1, PLK3, PLK4, PRKCE, PYK2, RAF1, RET, RIOK2, ROCK2, RSK2, SNARK, SRC, SRPK3, SYK, TAKl, TGFBRl, TIE2, TRKA, TSSK1B, TYK2(JH1 domain-catalytic), ULK2, VEGFR2, YANK? and ZAP70. U 2010/056583
- 98 -
RESULTS
Inhibition activity of Compound 82 was reported as percent control where
lower numbers indicate stronger activities. Table 7 summarizes 20 different kinases whose activity was significantly inhibited by the presence of Compound 82,
((l-(2-(3,5-dimethylphenyl amino)-5-fluoropyrimidin-4-yl)-4-methyl- 7/-pyrrol-3- yl)methyl) pyrrolidin-3-ol. Conventionally, the percent control of less than 35 is
deemed to be significant inhibition of kinase activity as the numeric value 35 is
frequently used as a threshold.
Table 7
Kinase Inhibition Profile of the Percent Control Less than 35 %
While this invention has been particularly shown and described to example
embodiments thereof, it will be understood by those skilled in the art that various
changes in form and details may be made therein without departing from the scope of the invention encompassed by the appended claims.

Claims (1)

  1. What is claimed is:
    1. A compound of Formula I):
    Formula I
    wherein:
    X is CH or N; R1 is selected from H, halo, CN, Ci-Cio alkyl or halo(Ci-C4)alkyl, wherein Ci-Cw alkyl, or halo(C1-C4)alkyl is optionally substituted;
    R2 is aryl, cycloalkyl, arylalkyl, or heterocyclyl, wherein the aryl, cycloalkyl, arylalkyl, or heterocyclyl is optionally and independently substituted at one or more carbon atoms with 1 -4 R5 or R5 groups; and wherein aryl and heterocyclyl having one or more nitrogen atoms is optionally and independently substituted at one or more nitrogen atoms with 1-4 R6 or R6a groups; independently halo, CN, or R7; and
    R4 is selected from (CH2)nOH, (CH2)nNRnR12, C(0)NHR7, C(0)NRnR12, C(0)OR7, C(0)R7, C(0)NR7R7, C(0)NR7R8, (CH2)nNR7R7, (CH2)nNR7R8, (CH2)nCN,
    (CH2)nSR7, (CH2)nS(0)nR7, or (CH2)nS(0)nNR7R7, wherein each n is independently 1 or 2; wherein: Each R5 is independently selected from halo, CF3, SR7, OR7, OC(0)R7, 0(CH2)nNR7R7, 0(CH2)nR7, 0(CH2)nC(0)NRnR12, 0(CH2)nC(0)NR7R7, NR7R7, NR7R8, NHC(0)NH2, C(0)OR7, N02, CN, C(0)R7, OSO2CH3, S(0)nR7, S(0)nNR7R7, NR7C(0)NR7R7, NR7C(0)R7, NR7C(0)OR7, NR7S(0)nR7, or NRnR12, wherein each n is independently 1 or 2;
    Each R5a is independently selected from amino, halo, hydroxy, Ci-C10 alkyl, C2-C10alkenyl, C3- 0 alkynyl, C3-Ci2cycloalkyl, Cs-Ciocycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl, wherein the C1-C10 alkyl, C2- Cjoalkenyl, C3-C10 alkynyl, C3-C12cycloalkyl, Cs-Ciocycloalkenyl, alkoxy, haloalkyl, aryl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1 to 3 groups selected from halo, hydroxy, alkyl, R9, or R10;
    Each R6 is independently R7, C(0)CH2CN, C(0)R7, C(0)OR7, C02(d- C6alkyl), C(0)NR7R7, S02NR7R7,or S02R7;
    Each R6a is independently hydroxy, Ci-C10 alkyl, C2-Cio alkenyl, C3-C1o alkynyl, C3-C12 cycloalkyl, C5-Cio cycloalkenyl, haloalkyl, wherein each R6 group is optionally and independently substituted with 1-3 groups selected from hydroxy, aryl, alkyl, halo, R9, or R10;
    Each R7 is independently H, C3- C12 cycloalkyl, C5-Ci2cycloalkenyl, aryl, aryl(Ci-C4)alkyl, haloalkyl, heteroaryl, or heterocyclyl, wherein the Cj-Cioalkyl, C2-Cioalkenyl, C3- Qoalkynyl, C3-C12 cycloalkyl, C5-C12cycloalkenyl, aryl, ary^C^C^alkyl, haloalkyl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1-4 groups selected from aryl, cycloalkyl, heteroaryl, heterocyclyl, alkyl, halo, amino, hydroxy, R9, or R10; Each R8 is independently C(0)R7, C(0)OR7, C(0)NR7R7, or S(0)nR7, wherein n is 1 or 2;
    Each R9 is independently CF3, SR7, OR7, NR7R7, NRUR12, C(0)NR7R7, C(0)NR1 ^12, S(0)nNR7R7, or S(0)nR7, wherein each n is independently 1 or 2;
    Each R1U is C(0)0(Ci-C6)alkyl, or halo(C1-C4)alkyl; and R11 and R12, taken together with the nitrogen atom to which they are bonded form:
    i) a 3-8 membered saturated or partially saturated ring having no heteroatom
    11 12
    other than the nitrogen atom to which R and R are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms;
    ii) a 5-8 membered saturated or partially saturated ring having 1-3
    11 12 heteroatoms, in addition to the nitrogen atom to which R and R are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1 -4 groups selected from R5 or R5 at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a;
    iii) a 9-10 membered saturated or partially saturated bicyclic ring having no
    11 12 heteroatom other than the nitrogen atom to which R and R are bonded, wherein said 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms; iv) a 9-10 membered saturated or partially saturated bicyclic ring having 1-5 heteroatoms, in addition to the nitrogen atom to which R1 1 and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide; or
    v) a 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1 -3 heteroatoms is optionally and independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a; a pharmaceutically acceptable salt thereof.
    The compound of Claim 1, wherein R2 is an aryl selected from: a 5-6 membered monocyclic aryl group having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur; an 8-10 membered bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone; an 8-10 membered partially saturated bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone; or an 8-10 membered partially saturated bicyclic aryl group having a carboxamide or sulfoxamide.
    The compound of Claim 2, wherein R2 is a 5-6 membered monocyclic aryl having 0-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur optionally and independently substituted with 1-4 R5 or R5a groups. 4. The compound of Claim 3, wherein the 5-6 membered monocyclic aryl is phenyl or pyrimidinyl optionally and independently substituted with 1, 2, or 3 groups selected from methyl, ethyl, phenyl, isoprophyl, methoxy, hydroxyethoxy, CF3, OC6¾, OCH2CH2NRuR12, OCH2CH2NR7R7,
    OCH2C6H5, OCH2C(0)NRnR12, OCH2C(0)NR7R7, OS02CH3, S02CH3,
    S02NHCH3, or NRnR12.
    The compound of Claim 2, wherein R2 is an 8-10 membered bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone, wherein the 8-10 membered bicyclic aryl group is selected from indolyl, indazolyl, benzothiophenyl, benzothiazolyl, benzofuranyl, naphthyl, or quinolinyl optionally and independently substituted with 1, 2, or 3 groups selected from alkyl, aryl, heteroaryl, alkoxy, halo, CF3, OCF3, or S02CH3 at the substitutable carbon atoms or nitrogen atom, wherein alkyl, aryl, or heteroaryl is optionally substituted with hydroxy, amino, or sulfone.
    The compound of Claim 2, wherein R2 is an 8-10 membered partially saturated bicyclic aryl group having 0-5 heteroatoms independently selected from nitrogen, oxygen, sulfur, sulfoxide, or sulfone, wherein the 8-10 membered partially saturated bicyclic aryl group has a phenyl ring fused to a non-aromatic carbocyclic or heterocyclic ring optionally and independently substituted with 1, 2, or 3 groups selected from alkyl, aryl, heteroaryl, alkoxy, halo, CF3, OCF3, or S02CH3 at the substitutable carbon atoms, wherein the 8-10 membered partially saturated bicyclic aryl group having a phenyl ring fused to a non-aromatic carbocyclic or heterocyclic ring is selected from dihydroindenyl, tetrahydronaphthyl, or dihydrobenzodioxinyl.
    The compound of Claim 1, wherein R4 is C(0)OR7 and R7 is independently H, Ci-Cio alkyl, C2-C10 alkenyl, or C3-Cio alkynyl, wherein the group represented by R7 is optionally and independently substituted with 1-4 groups selected from hydroxy, halo, amino, aryl, cycloalkyl, heterocyclyl, alkyl, R9, or R10.
    8. The compound of Claim 7, wherein R7 is Q-Cioalkyl, optionally substituted with halo, hydroxy, amino, Ci-C6 alkyl, C C6 alkoxy, Ci-C6 alkylamino, or di Ci-C6 alkylamino.
    9. The compound of Claim 8, wherein R1 is H, F, CI, Br, CF3, or CH3.
    10. The compound of Claim 8, wherein R is selected from H, cyclopropyl,
    isopropyl, furanyl, methyl, CF3, or phenyl.
    The compound of Claim 1 , wherein R4 is C(0)NHR7 and R7 is H, Ci-Cio alkyl, C2-C10 alkenyl, C3-C10 alkynyl, C3-Ci2 cycloalkyl, C5-C12 cycloalkenyl, aryl, haloalkyl, heteroaryl or heterocyclyl, wherein the Ci-Qo alkyl, C2-Cio alkenyl, C3-Cio alkynyl, C3-Ci2 cycloalkyl, C5-Ci2 cycloalkenyl, aryl, haloalkyl, heteroaryl or heterocyclyl is optionally and independently substituted with 1 -4 groups selected from, halo, amino, aryl, cycloalkyl, heterocyclyl, alkyl, R9, or R10.
    The compound of Claim 1 1 , wherein R7 is an aryl, wherein the aryl is phenyl optionally and independently substituted with 1 , 2, or 3 groups selected from methyl, methoxy, CF3, or S02CH3.
    The compound of Claim 11 , wherein R7 is Ci-C10 alkyl, wherein the Ci-C10 alkyl is optionally substituted with 1-3 groups selected from amino, halo, hydroxy, phenyl, C C6 alkyl, Ci-C6 alkoxy, C\-Ce alkylamino, or diQ-Ce alkylamino.
    The compound of Claim 1 1 , wherein R1 is H, F, CI, Br, CF3,or CH3.
    15. The compound of Claim 11 , wherein R3 is selected from H, methyl,
    cyclopropyl, isopropyl, furanyl, CF3, or phenyl. The compound of Claim 1, wherein R4 is C(0)NRHR12 and R11 and R12, taken together with the nitrogen atom to which they are bonded form:
    i) a 3-8 membered saturated or partially saturated ring having no
    heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms;
    ii) a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a;
    iii) a 9-10 membered saturated or partially saturated bicyclic ring
    having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 9-10 membered ring saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms; or iv) a 9-10 membered saturated or partially saturated bicyclic ring
    having 1-5 heteroatoms, in addition to the nitrogen atom to which Rn and R12 are bonded, wherein said heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide. The compound of Claim 16, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to
    11 12
    which R" and Rlx are bonded, wherein said 3-8 membered ring is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms.
    18. The compound of Claim 17, wherein said 3-8 membered saturated or
    partially saturated ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded is a 4-6 membered ring, wherein the 4-6 membered ring is azetidinyl, pyrrolidynyl, or piperidynyl optionally and independently substituted with 1-4 groups selected from R5 or R5aat one or more substitutable carbon atoms. 19. The compound of Claim 18, wherein said R5 or R5 is hydroxy, CH2OH, CH2CH2OH, NH2, NHR7, NHCOR7, NHC(0)NHR7, or NR7R7.
    20. The compound of Claim 19, wherein R1 is H, F, CI, Br, CF3, or CH3. 21. The compound of Claim 19, wherein R3 is selected from H, methyl,
    cyclopropyl, isopropyl, furanyl, CF3, or phenyl.
    22. The compound of Claim 1 , wherein R4 is (CH2)nNR7R7, and R7 is
    independently H, d-C^alkyl, C2-Ci0alkenyl, C3-C10alkynyl, C3- Ci2cycloalkyl, C5-Ci2 cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl, wherein the Ci-Ci0alkyl, C2-Ci0alkenyl, C3-C10alkynyl, C3- C12cycloalkyl, C5-C12cycloalkenyl, aryl, haloalkyl, heteroaryl, or heterocyclyl is optionally and independently substituted with 1 -4 groups selected from hydroxyl, halo, amino, aryl, cycloalkyl, heterocyclyl, or alkyl.
    23. The compound of Claim 22, wherein R7 is independently H or CrC^alkyl.
    24. The compound of Claim 23, wherein R7 is Ci-C10alkyl optionally substituted with phenyl.
    25. The compound of Claim 24, wherein R1 is H, F, CI, Br, CF3, or CH3. 26. The compound of Claim 25, wherein R3 is selected from H, methyl,
    cyclopropyl, isopropyl, furanyl, CF3, or phenyl.
    27. The compound of Claim 1, wherein R4 is (CH2)nNRnR12, and R11 and R12, taken together with the nitrogen atom to which they are bonded form:
    i) a 3-8 membered saturated or partially saturated ring having no
    heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 3-8 membered saturated or partially saturated ring is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms;
    ii) a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a;
    iii) a 9-10 membered saturated or partially saturated bicyclic ring
    having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms;
    iv) a 9-10 membered saturated or partially saturated bicyclic ring
    having 1-5 heteroatoms, in addition to the nitrogen atom to which
    1 1
    R" and Rl are bonded, wherein said heteroatoms are
    independently selected from nitrogen, oxygen, sulfur, sulfoxide, sulfone, carboxamide or sulfoxamide; or
    v) a 6-14 membered saturated or partially saturated bridged ring having
    1 -3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1 -3 heteroatoms is optionally and
    independently substituted with 1 -4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
    28. The compound of Claim 27, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form a 3-8 membered saturated or partially saturated ring having no heteroatom other than the nitrogen atom to which R1 1 and R12 are bonded, wherein said 3-8 membered ring is optionally and independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms.
    The compound of Claim 28, wherein the 3-8 membered saturated or partially saturated ring is a 4-6 membered ring selected from azetidinyl, pyrrolidinyl, or piperidinyl optionally and independently substituted with 1 -2 groups selected from hydroxy, halo, OC(0)R7, CH2OH, CH2CH2OH, N¾, NR7R7, NHC(0)NHR7, NHS02R7, C(0)OR7, or C(0)NHR7 at one or more substitutable carbon atoms. The compound of Claim 27, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form a 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms, in addition to the nitrogen
    11 12
    atom to which R and R are bonded, wherein said 1-3 heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 5-8 membered saturated or partially saturated ring having 1-3 heteroatoms is optionally and independently substituted with 1-4 groups selected from R5 or R5 at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
    The compound of Claim 30, wherein the 5-8 membered ring is morpholino, thiomorpholino, piperazinyl or homopiperazinyl, wherein piperazinyl or homopiperazinyl is optionally and independently substituted with hydroxy, Ci-Cio alkyl , CH2CH2OH, C(0)R7, C(0)NHR7, S02R7, S02NHR7 or C(0)OR7 at the nitrogen atom.
    The compound of Claim 27, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form a 9-10 membered saturated or partially saturated bicyclic ring having no heteroatom other than the nitrogen atom to which R11 and R12 are bonded, wherein said 9-10 membered saturated or partially saturated bicyclic ring is optionally substituted with 1-4 groups independently selected from R5 or R5a at one or more substitutable carbon atoms.
    The compound of Claim 32, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form tetrahydroisoquinoline.
    The compound of Claim 33, wherein R1 is H, F, CI, Br, CF3 or CH3
    35. The compound of Claim 33, wherein R is selected from H, methyl,
    cyclopropyl, isopropyl, furanyl, CF3, or phenyl. - 110 -
    The compound of Claim 27, wherein R11 and R12, taken together with the nitrogen atom to which they are bonded form a 6-14 membered saturated or partially saturated bridged ring having 1 -3 heteroatoms in addition to the nitrogen atom to which R11 and R12 are bonded, wherein said 1-3
    heteroatoms are independently selected from nitrogen, oxygen, sulfur, sulfone, or sulfoxide, and wherein said 6-14 membered saturated or partially saturated bridged ring having 1-3 heteroatoms is optionally and
    independently substituted with 1-4 groups selected from R5 or R5a at one or more substitutable carbon atoms and at one or more substitutable nitrogen atoms with R6 or R6a.
    The compound of Claim 36, wherein the 6-14 membered saturated or partially saturated bridged ring having 1 -3 heteroatoms in addition to the
    1 1 19
    nitrogen atom to which R and R are bonded, is 2,5- diazabicyclo[2.2.1]heptanyl optionally and independently substituted with 1- 4 groups selected from R5 or R5a at one or more substitutable carbon atoms.
    The compound of Claim 36, wherein R1 is H, F, CI, Br, CF3 or CH3.
    The compound of Claim 37, wherein R3 is selected from H, methyl, cyclopropyl, isopropyl, furanyl, CF3, or phenyl.
    A compound selected from: methyl l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-7H- pyrrole-3 -carboxylate; ethyl l-(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-3-methyl-iH- pyrazole-4-carboxylate; l-(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-3-methyl-iH-pyrazole-4- carboxylic acid; - I l l -
    (l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl-7H- pyrazol-4-yl)methanol;
    (l-(2-(3,5-dimet ylphenylamino)pyrimidin-4-yl)-3-methyl-iH-pyrazol-4- yl)methanol;
    (l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-iH-pyrazol-4- yl)methanol;
    (l-(2-(3,5-dimethoxyphenylamino)-5-fluoro pyrimidin-4-yl)-7H-pyrazol-4- yl)methanol;
    (l-(2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl-iH- pyrazol-4-yl)methanol;
    (l-(2-(3,5-dimethyl phenylamino)pyrimidin-4-yl)-7H-pynOl-3-yl)methanol;
    (l-(2-(2,3-dihydro-7H-inden-5-ylamino)pyrimidin-4-yl)-7H-pyrrol-3- yl)methanol;
    (l-(2-(3 ,5-dimethyl-4-(2-(pyrrolidin- 1 -yl)ethoxy)phenylamino)pyrimidin- 4-yl)-4-methyl-7H-pyrrol-3-yl)methanol;
    (l-(2-(3,5-dimethyl-4-phenoxyphenylamino)pyrimidin-4-yl)-4-methyl-7H- pyrrol-3-yl)methanol;
    (l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-7H-pyrrol-3- yl)methanol;
    (l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl-7H- pyrrol-3 -yl)methanol;
    2-(4-(5-fluoro-4-(3-(hydroxymethyl)-4-methyl-iH-pyrrol-l-yl)pyrimidin- 2-ylamino)-2,6-dimethylphenoxy)ethanol; (l-(2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl-iH- pyrrol-3-yl)methanol;
    (l-(2-(3,5-bis(trifluoromethyl)phenylamino)-5-fluoropyrimidin-4-yl)-4- methyl-iH-pyrrol-3-yl)methanol;
    (l-(5-fluoro-2-(naphthalene-2-ylamino)pyrimidin-4-yl)-4-methyl-iH- pyrrol-3-yl)methanol;
    (l-(5-chloro-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-4-methyl- iH-pyiTol-3 -yl)methanol;
    (4-cyclopropyl-l-(5- methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-iH-pyrrol-3-yl)methanol;
    (4-methyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)- 7 H-pyrrol-3 -yl)methanol;
    2-(4-(4-(3-(hydroxyl methyl)-4-methyl-7H-pyrrol-l-yl)-5-methyl pyrimidin-2-ylamino)-2,6-dimethoxyphenoxy)ethanol;
    2-(4-(4-(4-(3-(hydroxylmethyl)-4-methyl-iH-pyrrol-l-yl)-5-methyl pyrimidin-2-ylamino)-2-methylphenyl)piperazin- 1 -yl)ethanol; S)- 1 -(4-(4-(3 -(hydroxylmethyl)-4-methyl-7H-pyrrol- 1 -yl)-5-methyl pyrimidin-2-ylamino)-2-methylphenyl)pyrrolidin-3-ol;
    (l-(5-fluoro-2-(4-(methylsulfonyl)phenylamino)pyrimidin-4-yl)-4-methyl- iH-pyrrol-3-yl)methanol;
    (l-(2-(3,5-dimethylphenylamino)-5-(trifluoromethyl)pyrimidin-4-yl)-4- methyl-iH-pyrrol-3 -yl)methanol;
    (l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-phenyl-iH- pyrrol-3 -yl)methanol ; (l-(5-fluoro-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-4-(furan-3- yl)-iH-pyrrol-3 -yl)methanol; l-(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-N-(2-hydroxyethyl)-N,3- dimethyl-2H-pyrazole-4-carboxamide; l-(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-N,N-bis(2-hydroxyethyl)-
    3- methyl-iH-pyrazole-4-carboxamide;
    (S)-( 1 -(2-(3 ,5 -dimethylphenylamino)pyrimidin-4-yl)-3 -methyl-iH-pyrazol-
    4- yl)(3 -hydroxypyrrolidin- 1 -yl)methanone;
    (i?)-(l -(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-3-methyl-7H- pyrazol-4-yl)(3-hydroxypyrrolidin- 1 -yl)methanone; V-(2-aminoethyl)- 1 -(2-(3 ,5-dimethylphenylamino)pyrimidin-4-yl)-3 - (trifluoromethyl)-/H-pyrazole-4-carboxamide;
    1- (2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-iV-(3,5- dimethyl phenyl)-7H-pyrazole-4-carboxamide;
    (l-(2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-iH-pyrazol-4- yl)(piperidin- 1 -yl)methanone;
    (S)- 1 -(2-(3 ,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-N-(l - hydroxy propan-2-yl)-3-methyl-iH-pyrazole-4-carboxamide;
    N-benzyl-l -(2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-iH- pyrazole-4-carboxamide;
    (i?)-(l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl- 7H-pyrazol-4-yl)(3 -hydroxypyrrolidin- 1 -yl)methanone;
    2- ((l -(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl-7H- pyrazol-4-yl)methylamino)ethanol; 2-(4-((4-methyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-7H-pyrrol-3-yl)methyl)piperazin- 1 -yl)ethanol;
    (R)- 1 -((1 -(2-(3 ,5-dimethylphenylamino)pyrimidin-4-yl)-4-methyl-/H- pyrrol-3 -yl)methyl)pyrrolidin-3 -ol ; l-((4-cyclopropyl-l -(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-7H- pyrrol-3-yl)methyl)azetidin-3-ol;
    4-(4-((benzylamino)methyl)-3 -methyl-iH-pyrazol- 1 -yl)-N-(3 ,5- dimethylphenyl)pyrimidin-2-amine;
    4-(4-(3 -((3 -hydroxyazetidin- 1 -yl)methyl)-4-methyl-77J-pyrrol- 1 - yl)pyrimidin-2-ylamino)-2,6-dimethylphenyl methanesulfonate;
    (7?)-4-(4-(3 -((3-hydroxypyrrolidin- 1 -yl)methyl)-4-methyl-7H-pyrrol- 1 - yl)pyrimidin-2-ylamino)-N,2-dimethylbenzenesulfonamide;
    (R)- 1 -(( 1 -(2-(3 ,5 -dimethyl-4-(2-(pyrrolidin- 1 -yl)ethoxy)phenyl
    amino)pyrimidin-4-yl)-3-methyl-7H-pyrazol-4-yl)methyl)pyrrolidin-3-ol;
    (5)-l -((l-(2-(3,5-dimethylphenylamino)pyrimidin-4-yl)-4-methyl-7H- pyrrol-3-yl)methyl)pyrrolidine-3-carboxylic acid;
    (R)- 1 -(( 1 -(2-(3 ,5-dimethyl-4-phenoxyphenylamino)pyrimidin-4-yl)-4- methyl-7H-pyrrol-3 -yl)methyl)pyrrolidin-3 -ol;
    (R)- 1 -(l-((l-(2-(3 ,5-dimethylphenylamino)pyrimidin-4-yl)-4-methyl-7H- pyrrol-3 -yl)methyl)pyrrolidin-3 -yl)urea;
    1 -((4-methyl- 1 -(2-(2-methylbiphenyl-4-ylamino)pyrimidin-4-yl)-7H- pyrrol-3-yl)methyl)azetidin-3-ol; 1- ((l-(2-(2,3-dihydro-7H-inden-5-ylamino)pyrimidin-4-yl)-4-methyl-/H- pyrrol-3-yl)methyl)azetidin-3 -ol 1 -((4-methyl- 1 -(2-( 1 -methyl-7H-indol-5- ylamino)pyrimidin-4-yl)-7H-pyrrol-3-yl)methyl)azetidin-3-ol;
    (i?)- 1 -((4-methyl- 1 -(2-( 1 -methyl-7H-indol-5-ylamino)pyrimidin-4-yl)-7H- pyrrol-3-yl)methyl) pyrrolidin-3-ol;
    4-(3-((4,4-difluoropiperidin- 1 -yl)methyl)-4-methyl-77J-pyrrol- 1 -yl)-N-(3,5 dimethylphenyl)pyrimidin-2-amine;
    (7?)-2-(4-(4-(4-((3-hydroxypyrrolidin-l-yl)methyl)-3-methyl-7H-pyrazol-l yl)pyrimidin-2-ylamino)-2,6-dimethylphenoxy)-l-morpholinoethanone;
    2- (4-(4-(4-((3-hydroxyazetidin- 1 -yl)methyl)-3-methyl-7H-pyrazol- 1 - yl)pyrimidin-2-ylamino)-2,6-dimethylphenoxy)-l-morpholinoethanone;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-(pyrrolidin-l-ylmethyl)- 777-pyrazol- 1 -yl)pyrimidin-2-amine; vV-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-(pyrrolidin-l-ylmethyl)- 7H-pyrazol- 1 -yl)pyrimidin-2-amine;
    (S)-2-(( 1 -(2 -(3 ,5 -dimethylphenylamino)-5 -fluoropyrimidin-4-yl)-3 -methyl 7-pyrazol-4-yl)methyl amino)propan-l -ol;
    4-(4-((cyclopropylamino)methyl)-3-methyl-7H-pyrazol-l -yl)-iV-(3,5- dimethylphenyl)-5-fluoropyrimidin-2-amine;
    4-(4-((cyclohexylamino)methyl)-3-methyl-7H-pyrazol-l-yl)-N-(3,5- dimethylphenyl)-5-fluoropyrimidm-2-amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-(piperidin-l-ylmethyl)- 777-pyrazol- 1 -yl)pyrimidin-2-amine; N-(3,5-dimethylp enyl)-5-fluoro-4-(3-methyl-4-(morpholinomethyl)-7 /- pyrazol- 1 -yl)pyrimidin-2-amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-((p enylamino)methyl)- iH-pyrazol- 1 -yl)pyrimidin-2-amine;
    4-(4-((3 ,4-dihydroisoquinolin-2(iH)-yl)methyl)-3 -methyl-iH-pyrazol- 1 - yl)-N-(3,5-dimethyl phenyl)-5-fluoropyrimidin-2-amine;
    4-(4-((benzyl(methyl)amino)methyl)-3-methyl-7H-pyrazol-l-yl)-N-(3,5- dimethylphenyl)-5-fluoro pyrimidin-2-amine;
    N/-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl- 7H-pyrazol-4-yl)methyl)ethane- 1 ,2-diamine;
    N-(3,5-dimethylphenyl)-5-iluoro-4-(4-((4-fluorophenetliylamino)methyl)- 3 -methyl- 1 H-pyr azol- 1 -yl)pyrimidin-2- amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-((pyridin-4- ylmethylamino)methyl)-iH-pyrazol- 1 -yl)pyrimidin-2-amine;
    (£)- 1 -(( 1 -(2-(3 ,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3 -methyl- 7H-pyrazol-4-yl)methyl)pyrrolidin-3-ol;
    (^)-l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl- iH-pyrazol-4-yl)methyl)pyrrolidin-3-ol; l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3-methyl-iH- pyrazol-4-yl)methyl)piperidin-4-ol;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-(piperidin-l-ylmethyl)- iH-pyrrol- 1 -yl)pyrimidin-2-amine; l-((3-methyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-/H-pyrazol-4-yl)methyl)azetidin-3-ol; 2-(( 1 -(2-(3 ,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-3 -methyl-7H- pyrazol-4-yl)methyl amino)ethanol;
    4-(4-((benzylamino)methyl)-3 -met yl-7H-pyrazol- 1 -yl)-7V-(3 , 5 - dimethylphenyl)-5-fluoropyrimidin-2-amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-((4-methylpiperazin-l- yl)methyl)-7H-pyrazol- 1 -yl)pyrimidin-2-amine;
    4-(4-((dimethylamino)methyl)-3 -methyl-77J-pyrazol- 1 -yl)-N-(3 ,5- dimethylphenyl)-5-fluoropyrimidin-2-amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-((piperidin-4-ylamino) methyl)-7H-pyrazol- 1 -yl)pyrimidin-2-amine trihydrochloride;
    N-(3 ,5-dimethylphenyl)-5-fiuoro-4-(3 -(3 -sulfonylpyrrolidin- 1 -ylmethyl)- 7H-pyrrol- 1 -yl)pyrimidin-2-amine;
    4-(3-((dimethylamino)rnethyl)-4-methyl-777-pyrrol-l-yl)-N-(3,5- dimethylphenyl)-5-fluoropyrimidin-2-amine;
    N-(3,5-dimethylphenyl)-5-fluoro-4-(3-methyl-4-(mo holinomethyl)-7 J- pyrrol- 1 -yl)pyrimidin-2-amine;
    (7^)-l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl- 77J-pyrrol-3-yl)methyl) pyrrolidin-3-ol; l-((l-(2-(3,4-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl-777- pyrrol-3-yl)methyl)azetidin-3-ol;
    (7?)-2-(4-(5-fluoro-4-(3-((3-hydroxypyrrolidin-l-yl)methyl)-4-methyl-777- pyrrol- 1 -yl)pyrimidin-2-ylamino)-2,6-dimethylphenoxy)- 1 - morpho linoethanone ; 3- (4-((4-methyl-l -(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-iH-pyrrol-3-yl)methyl)piperazin-l -yl)-3-oxopropanenitrile;
    (i?)-4-(3 -((3 -aminopyrrolidin- 1 -yl)methyl)-4-met yl-7H-pyrrol- 1 -yl)-N- (3,5-dimethylphenyl)-5-fluoropyrimidin-2-amine; l-((l-(5-fluoro-2-(naphthalen-2-ylamino)pyrimidin-4-yl)-4-methyl-iH- pyrrol-3-yl)methyl)azetidin-3-ol; l-((l -(2-(4-(benzyloxy)-3,5-dimethoxyphenylamino)-5-methylpyrimidin-
    4- yl)-iH-pyrrol-3-yl)methyl)azetidin-3-ol;
    (i?)-4-(5-fluoro-4-(3 -((3 -hydroxypyrrolidin- 1 -yl)methyl)-4-methyl-iH- pyrrol- 1 -yl)pyrimidin-2-ylamino)-2,6-dimethylphenyl methanesulfonate;
    (i?)-l -((l-(5-fluoro-2-(4-(2-hydroxyethoxy)-3,5- dimethylphenylamino)pyrimidin-4-yl)-4-methyl-7H-pyrrol-3- yl)methyl)pyrrolidin-3 -ol; l-((4-methyl-l -(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-/H-pyrrol-3-yl)methyl)azetidin-3-ol; l-((4-methyl-l -(5-met yl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-7H-pyrrol-3-yl)methyl)azetidin-3-yl acetate; l-((4-methyl-l -(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)- H-pyrrol-3-yl)methyl)azetidin-3-yl pivalate; l-((4-cyclopropyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin- 4-yl)-iH-pyrrol-3-yl)methyl)azetidin-3-ol; l-((4-methyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)- H-pyrrol-3-yl)methyl)urea; 4-(3-((l ,4-diazepan-l -yl)methyl)-4-methyl-7H-pyrrol-l -yl)-5 -methyl -JV- (3,4,5-trimethoxyphenyl)pyrimidin-2-amine trihydrochloride;
    (^-l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl- iH-pyrrol-3-yl)methyl) pyrrolidin-3-ol;
    2,2-dimethyl-l-(4-((4-methyl-l-(5-methyl-2-(3,4,5- trimethoxyphenylamino)pyrimidin-4-yl)-7H-pyrrol-3-yl)methyl)-l,4- diazepan- 1 -yl)propan- 1 -one;
    (S)- 1 -(( 1 -(2-(3 ,5 -dimethylphenylamino)-5 -fluoropyrimidin-4-yl)-4-methyl- iH-pyrrol-3-yl)methyl)pyrrolidin-3-ol; l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl-iH- pyrrol-3-yl)methyl)piperidin-4-ol;
    (S)-2-(( 1 -(2-(3 , 5 -dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-methyl- iH-pyrrol-3 -yl)methylamino)propan- 1 -ol;
    4-(3 -((benzylamino)methyl)-4-methyl-7H-pyrrol- 1 -yl)-N-(3 ,5- dimethoxyphenyl)-5 -fluoro pyrimidin-2-amine;
    (i?)-l-((l-(2-(3,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-4- methyl-/H-pyrrol-3 -yl)methyl)pyrrolidin-3 -ol;
    4-(3-((dimethylamino)methyl)-4-(furan-3-yl)- H-pyrrol-l-yl)-5-fluoro-N- (3,4,5 -trimethoxyphenyl)pyrimidin-2-amine ;
    1 -((1 -(2-(3 ,5-dimethoxyphenylamino)-5-fluoropyrimidin-4-yl)-4-metliyl- 7H-pyrrol-3-yl)methyl) piperidin-4-ol;
    N-(3,5-dimethoxyphenyl)-4-(3-((dimethylamino)methyl)-4-methyl-iH- pyrrol- 1 -yl)-5 -fluoropyrimidin-2-amine; (R)- 1 -(( 1 -(5 -fluoro-2-(3 -(trifluoromethyl)phenylamino)pyrimidin-4-yl)-4- methyl-iH-pyrrol-3 -yl)methyl)pyrrolidin-3 -ol;
    1- ((l-(5-fluoro-2-(3-(trifluoromethyl)phenylamino)pyrimidin-4-yl)-4- methyl-iH-pyrrol-3 -yl) methyl)piperidin-4-ol;
    2- (4-((l-(5-chloro-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-4- methyl-7H-pyrrol-3 -yl)methyl)piperazin- 1 -yl)ethanol; l-((l-(5-chloro-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-4- methyl-iH-pyrrol-3-yl)methyl)azetidin-3-ol; l-((l-(5-chloro-2-(4-(2-hydroxyethoxy)-3,5- dimethylphenylamino)pyrimidin-4-yl)-4-methyl- H-pyrrol-3- yl)methyl)azetidin-3 -ol;
    4-(3-((dimethylamino)methyl)-4-methyl-7H-pyrrol-l-yl)-N-(3,5- dimethylphenyl)-5-methylpyrimidin-2-amine;
    4- (3 -((dimethylamino)methyl)-4-methyl-iH-pyrrol- 1 -yl)-N-(3 ,5- dimethylphenyl)-5-methylpyrimidin-2-amine;
    1- ((l-(2-(3,5-dimethylphenylamino)-5-methylpyrimidin-4-yl)-4-methyl- iH-pyrrol-3-yl)methyl)piperidin-4-ol;
    2- (4-(( 1 -(2-(4-(4-(2-hydroxyethyl)piperazin- 1 -yl)-3 -methylphenylamino)-
    5- methylpyrimidin-4-yl)-4-methyl-iH-pyrrol-3-yl)methyl)piperazin-l- yl)ethanol;
    4-((l-(2-(4-(2-hydroxyethoxy)-3,5-dimethylphenylamino)-5- methylpyrimidin-4-yl)-4-methyl-iH-pyrrol-3 -yl)methyl)- V-methyl- 1 ,4- diazepane- 1 -carboxamide; 4-((l-(2-(4-(2-hydroxyethoxy)-3,5-dimethylphenylamino)-5- methylpyrimidin-4-yl)-4-methyl-7H-pyrrol-3 -yl)methyl)- 1 ,4-diazepane- 1 - carboxamide;
    1- ((4-methyl-l-(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-iH-pyrrol-3-yl)methyl)piperidin-4-ol;
    (1 -((4-methyl- 1 -(5-methyl-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4- yl)-iH-pyrrol-3-yl)methyl)piperidin-4-yl)methanol;
    1 -((1 -(2-(3 ,5-dimethyl-4-(2(pyrrolidin- 1 -yl)ethoxy)phenylamino)-5- methylpyrimidin-4-yl)-4-methyl-iH-pyrrol-3-yl)methyl) azetidin-3-ol;
    2- (4-(4-(3-((dimethylamino)methyl)-4-methyl-7H-pyrrol-l-yl)-5- methylpyrimidin-2-ylamino)-2,6-dimethylphenoxy)etlianol;
    (R)- 1 -(( 1 -(5 -fluoro-2-(4-(2-hydroxyethoxy)-3 ,5 - dimethylphenylamino)pyrimidin-4-yl)-4-methyl-iH-pyrrol-3- yl)methyl)pyrrolidin-3 -ol ;
    4-(3-((dimethylamino)methyl)-4-methyl-iH-pyrrol-l-yl)-5-fluoro-N-(3- (trifluoromethyl)phenyl) pyrimidin-2-amine;
    2- (4-(5-fluoro-4-(3-((3- ydroxyazetidin-l-yl)met yl)-4-methyl-iH-pyrrol- 1 -yl)pyrimidin-2-ylamino)-2,6-dimethylphenoxy)- 1 -(pyrrolidin- 1 - yl)ethanone;
    (R)- 1 -(( 1 -(2-(3 ,5-dimethylphenyl amino)-5-(trifluoromethyl) pyrimidin-4- yl)-4-methyl-iH-pyrrol-3-yl)methyl)pyrrolidin-3-ol; l-((l-(5-fluoro-2-(3,4,5-trimethoxyphenylamino)pyrimidin-4-yl)-4-(furan-
    3- yl)-7H-pyrrol-3-yl)methyl)azetidin-3-ol;
    4-(3-((dimethylamino)methyl)-4-phenyl-7H-pyrrol-l-yl)-iV-(3,5- dimethylphenyl)-5-fluoropyrimidin-2-amine; (i?)-l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-4-phenyl- /H-pyrrol-3 -yl)methyl)pyrrolidin-3 -ol;
    N-(3,5-bis(trifluoromethyl)phenyl)-4-(3-((dimethylamino)methyl)-4- methy WH-pyrrol- 1 -yl)-5-fluoropyrimidin-2-amine;
    (R)- 1 -(( 1 -(2-(3 , 5 -bis(trifluoromethyl)phenylamino)-5 -fluoropyrimidin-4- yl)-4-methyl-7H-pyrrol-3-yl)methyl)pyrrolidin-3-ol;
    1- ((l-(2-(3,5-bis(trifluoromethyl)phenylamino)-5-fluoropyrimidin-4-yl^ methyl-/H-pyrrol-3-yl)methyl)piperidin-4-ol;
    4-(3-((dimethylamino)methyl)-7H-pyrrol-l-yl)-iV-(3,5-dimethylplienyl)-5- fluoropyrimidin-2-amine;
    (i?)-l-((l-(2-(3,5-dimethylphenylamino)-5-fluoropyrimidin-4-yl)-iH- pyrrol-3-yl)methyl)pyrrolidin-3-ol;
    4- (3-(2,5-diazabicyclo[2.2.1]heptan-2-ylmethyl)-4-methyl-iH-pyrrol-l-yl)-
    5- bromo-N-(3,4,5-trimethoxyphenyl)pyrimidin-2-amine trihydrochloride;
    (i?)-2-(4-(5-fluoro-4-(3-((3-hydroxypyrrolidin-l-yl)methyl)-4-methyl-iH- pyrrol- 1 -yl)pyrimidin-2-ylamino)-2,6-dimethylphenoxy)- 1 - morpholinoethanone;
    2- (4-(4-(3-(2,5-diazabicyclo[2.2.1]heptan-2-ylmethyl)-4-methyl-iH- pyrrol-l-yl)-5-methylpyrimidin-2-ylamino)-2,6-dimethylphenoxy)ethanol trihydrochloride;
    4-(3-((l ,4-diazepan-l -yl)methyl)-4-methyl-7H-pyrrol- 1 -yl)-5-chloro-N- (2,3-dihydrobenzo[b][l,4]dioxin-6-yl)pyrimidin-2-amine; l-((l-(5-chloro-2-(2,3-dihydrobenzo[b][l,4]dioxin-6-ylamino)pyrimidin-4- yl)-4-methyl-7H-pyrrol-3 -yl)methyl)azetidin-3-ol; or (R)- 1 -(( 1 -(2-(4,6-dimethylpyrimidin-2-ylamino)-5-fluoropyrimidin-4-yl)- 4-methyl-iH-pyrrol-3-yl)methyl)pyrrolidin-3-ol.
    A isomeric compound of Claim 1.
    A pharmaceutical formulation comprising a compound of Claim 1 in combination with a pharmaceutically acceptable carrier, diluent or excipient.
    A method of treating a protein kinase-mediated disease in a subject in need thereof, comprising administering to said subject a therapeutically effective amount of a compound of Claim 1 or a pharmaceutically acceptable salt thereof, wherein said protein kinase-mediated disease is selected from the group of consisting of asthma, chronic obstructive pulmonary disease (COPD), adult respiratory distress syndrome (ARDS), ulcerative colitis, Crohn's disease, bronchitis, dermatitis, allergic rhinitis, psoriasis, scleroderma, urticaria, bullous disorders, collagenoses, contact dermatitis eczema, Kawasaki Disease, rosacea, Sjogren-Larsso Syndrome, rheumatoid arthritis, multiple sclerosis, inflammatory bowel syndrome, HIV associated diseases, lupus, lymphoma, osteosarcoma, melanoma, breast cancer, renal cancer, prostate cancer, colorectal cancer, thyroid cancer, ovarian cancer, pancreatic cancer, neuronal cancer, lung cancer, uterine cancer,
    gastrointestinal cancer, Alzheimer's disease, Parkinson's disease, osteoporosis, osteopenia, osteomalacia, osteofibrosis, Paget' s disease, diabetes, blood vessel proliferative disorders, ocular diseases, cardiovascular disease, restenosis, fibrosis, atherosclerosis, arrhythmia, angina, myocardial ischemia, myocardial infarction, cardiac or vascular aneurysm, vasculitis, stroke, peripheral obstructive arteriopathy, reperfusion injury following ischemia of an organ or a tissue, endotoxic, surgical or traumatic shock, hypertension, valvular heart disease, heart failure, abnormal blood pressure, vasoconstriction, vascular abnormality, transplant rejection and infectious diseases including viral and fungal infections.
    44. The method of Claim 43, wherein said compound of Claim 1 is administered singly or in combination with one or more additional therapeutic agents.
    45. The method of Claim 43, wherein said compound of Claim 1 is administered via intravenous administration, subcutaneous administration, inhalation, oral administration, rectal administration, parenteral, intravitreal administration, intramuscular administration, intranasal administration, dermal
    administration, topical administration, otic administration, ophthalmic administration, buccal administration, tracheal administration, bronchial administration, or sublingual administration. 46. A method of inhibiting SYK, PYK2, FAK, ZAP70, PIM1, FLT3, RET, JAK2, JAK3, LRRK2, LRRK2(G2019S), ABL1(T315I), AURKB, AXL, FLT3, KIT, KIT(D816V), KIT(V559D,T670I), MKNK2, MLK1, PDGFRB, PLK3, RET, SNARK, SRPK3, TAK1, or TYK2 signaling in a subject in need thereof, comprising administering to said subject an effective amount of a compound of Claim 1.
    47. A method of inhibiting growth of cancer cells, comprising contacting the cancer cells with a compound of Claim 1 or a pharmaceutically acceptable salt thereof.
    48. A method of treating cancer in a subject in need thereof, comprising
    administering to the subject an effective amount of a compound of Claim 1 or a pharmaceutically acceptable salt thereof.
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US26110009P 2009-11-13 2009-11-13
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