AU2008202178A1 - Methods of treatment and drug screening methods - Google Patents

Description

00 0 i-^ Australian Patents Act 1990 Regulation 3.2 ORIGINAL COMPLETE SPECIFICATION STANDARD PATENT Invention Title "Methods of treatment and drug screening methods" The following statement is a full description of this invention, including the best method of performing it known to us:- Q\OPER\MKR\GENERAL\30543210 div filing doc 00

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METHODS OF TREATMENT AND DRUG SCREENING METHODS This is a divisional of Australian patent application No. 2004212557, the entire contents of which are incorporated by reference.

00 5 The present invention relates to methods of treatment and drug screening r- methods; in particular, it relates to a target for cardiovascular drug design and compounds which are directed at this target.

O Lipid homeostasis is tightly controlled during normal development and health; 00 however, dysfunction in lipid homeostasis results in the development of diseases such as O 10 atherosclerosis, obesity, diabetes and cancer. Critical regulators in lipid homeostasis C0 include a family of lipid sensing transcription factors known as Peroxisome Proliferator Activated Receptors (PPARs). PPARs are members of the steroid hormone/nuclear receptor subfamily that are activated by structurally diverse chemicals such as fatty acids, prostanoids, hypolipidemic drugs, non-steroidal anti-inflammatory drugs, insulin sensitizers and environmental pollutants The first PPAR to be described, PPARca, controls lipid metabolism in the liver and is activated by lipid lowering drugs such as clofibrate Mice that have had the gene encoding PPARct disrupted have a deficiency in their ability to metabolise and excrete hepatic lipid and the hepatocytes accumulate large lipid droplets in response to hypolipidemic drugs Another isoform, PPARy, is required for the lipid stimulated development of adipocytes. PPARy is a high affinity nuclear receptor for prostanoids and is the pharmacological target for the thiazolidinedione group of anti-diabetic agents such as rosiglitazone (BRL49653) International Application Publication Number WO 94/05659 (SmithKline Beecham PLC). Genetic ablation of this gene is lethal The function of another form of PPAR, PPAR5, remains unknown. PPAR5 has been reported to be expressed at very low levels in all tissues examined however, we have now made the observations that PPAR5 is expressed selectively in cells of the monocyte/macrophage lineage and is upregulated, along with PPARy, during phorbol ester-induced macrophage differentiation. PPAR5 is a fatty acid sensor and is activated by the unsaturated fatty acids linoleic acid and oleic acid, and these fatty acids have been implicated as being important signalling compounds in the differentiation of monocytes (9,10,11). PPAR5 is not activated by fibrate drugs, such as clofibrate, or by thiazolidinediones such as BRL49653.

WO 97/28149 (Merck Co. Inc.) describes PPAR8 agonists which are purported to be useful for raising high density lipoprotein (HDL) plasma levels in mammals, and for preventing, halting or slowing the progression of atherosclerotic cardiovascular diseases.

High fat diets are known to be a major factor in the development of atherosclerosis, and many drugs that are used in the treatment of atherosclerosis modify lipid metabolism. Lipids are physically associated with the pathology of atherosclerosis 00

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in the macrophage-derived foam cell which are highly activated macrophages that are filled with lipid droplets. These foam cells are present at high concentrations in vascular lesions known as plaques, that eventually burst and result in thrombotic blockage of the blood vessels. This blockage may be clinically represented as a heart attack, stroke or peripheral artery disease. We have now shown that mouse macrophages and human THP-1 monocytic cell'line express PPAR5 when activated by phorbol esters. The 00 00

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00 0 0 activated THP-1 cells become adherent and spread on plastic culture dishes. In the appropriate fatty acid conditions, these cells will fill with lipid as detected by Oil Red O M staining and become foam cells. These cells express genes that are associated with foam cells in vivo, such as IL-13 TNFa, IGF-1, CD36, MCP-I and thromboxane synthase.

These cells provide a model of lipid-induced foam cell formation. This accumulation can be prevented by candidate anti-atherosclerosis drugs such as BRL49653, thus demonstrating an anti-atherosclerotic property of the drug and that the model is useful in OO identifying anti-atherosclerotic drugs. This assay can be performed in a microtitre plate 0 format and the lipid staining quantitated optically in a microtitre plate reader.

Using a selectable expression vector we have modified THP-1 cells to express antisense RNA. This cell line grow normally in culture, however when treated CK with phorbol ester this cell line no longer differentiates. Trypan blue staining of this cell 00 Sline after phorbol ester treatment reveals that the cells have died. Therefore inhibition of function has switched the response to inflammatory stimuli from differentiation to death. The atherosclerotic plaque is filled with highly activated macrophage derived foam cells, and local concentrations of inflammatory mediators is very high within the plaque. Without being bound by any theory, we believe that inhibition of function in foam cells within, for example, atheromatous lesions will be useful to initiate a self-destruct cascade within the plaque. Controlled removal of foam cells without inflammation or necrosis has recently been demonstrated as an efficacious method of promoting plaque regression, using anti-sense therapy against BCL-X (Pollman et al (1998) Nature Medicine 4, 222-227). The targeting of PPAR5 in the activated macrophage is, we believe, likely to be highly specific as it is a response that relies upon the specific phenotypic state of the activated foam cell.

One object of the invention is the provision of compounds, or screens for compounds, which interfere with the formation of the foam cell development, or lead to the controlled removal of potential foam cells. Such compounds are believed to be useful in the promotion of plaque regression, and therefore the reduction in risk of heart disease stroke or thrombosis.

We have shown that PPAR5 fulfils a critical role in the activation of macrophages and that selective inhibition of PPAR5 activity can prevent foam cell formation.

We have also shown that PPARy agonists inhibit lipid accumulation and that and PPARy oppose each other in the process of foam cell formation.

A first aspect of the invention provides a method of preventing or reducing foam cell development from macrophages or other cells, or removing foam cells, the method comprising contacting said macrophages or other cells or foam cells with an effective amount of an inhibitor of PPAR5 activity.

Suitably, the macrophages or other cells are those involved in atherosclerotic pathology.

Although the method has use in relation to studying macrophages and foam cells in culture, the method is particularly suited to preventing or reducing foam cell development, or removing foam cells, in vivo in particular within the body of a human or other mammal. Foam cells are lipid-laden cells such as leukocytes, usually macrophages.

00 0 They have internalized lipids and store them as cytoplasmic droplets, which gives the cells their characteristic foamy appearance in light microscopy.

A second aspect of the invention provides a method of preventing or reducing foam cell development from macrophages or other cells, or removing foam cells, in a patient, the method comprising administering to the patient an effective amount of an inhibitor of PPAR5 activity.

Suitably, the macrophages or other cells are those involved in atherosclerotic 00 pathology.

Cells which may develop into foam cells include not only macrophages but also smooth muscle cells. Preferably, the inhibitor of PPAR8 activity is one which prevents or Sreduces foam cell development from macrophages, or removes macrophage-derived foam OO cells. More preferably, the method is a method of preventing or reducing foam cell development from macrophages.

e Without prejudice to any further aspects of the invention, and while not being bound by any theory concerning the invention, it is believed that the development of foam cells from macrophages is associated with various disease states and that an inhibitor of PPARS activity will prevent or reduce, at least to a desirable extent the development of foam cells from macrophages. The diseases which are associated with foam cell development include but are not limited to atherosclerosis, heart disease, stroke, peripheral artery diseases, and angina.

The methods may also be used for the prevention of restenosis and for regression of atheroma.

The finding that inhibition of PPARS activity prevents the activation of macrophages would also suggest that the methods may also be used in the treatment of inflammatory disorders. Examples of inflammatory disorders include rheumatoid arthritis, systemic sclerosis, and lupus. In support of a r6le for PPAR5 in inflammation, the non-steroidal anti-inflammatory drug sulindac, which blocks PPAR5 transcriptional activity, is unable to prevent PMA (phorbolmyristate acetate)-induced epidermal hyperplasia and inflammation in PPAR6-null mice (Peters J M et al (2000) Mol. and Cell Biol., 20, 5119-5128).

Accordingly, in a further aspect, the invention provides a method of preventing or treating inflammatory disorders which method comprises administering to the patient an effective amount of an inhibitor of PPAR5 activity.

There are a wide variety of disorders that arise through the pathology of atherosclerosis and include angina, coronary heart disease, stroke, peripheral vascular disease, Alzheimer's disease, vascular dementia, systemic sclerosis and retinal vascular degeneration.

A third aspect of the invention provides a method of preventing or treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels in a patient, the method comprising administering to the patient an effective amount of an inhibitor of PPAR5 activity. It is believed that the method of this invention is particularly suited to the prevention or treatment of atherosclerosis, coronary heart disease, stroke or peripheral heart disease.

00 O We have shown that inhibition of PPARS activity inhibits PMA-stimulated N proliferation of cells. Thus, a fourth aspect of the invention provides a method of preventing or reducing proliferation of cells, which method comprises contacting the cells with an inhibitor of PPAR8 activity. Cells which are stimulated to proliferate by PMA include skin cells, colon cells, breast cells and prostate cells. In support of the role of PPAR5 in tumorigenesis it has recently been demonstrated that non-steroidal antiinflammatory agents exert their anti cancer activity in colon-derived cells via blockade of transcriptional activity and promoting apoptosis. (He T-C et al:, 1999 Cell, 99, 0 335-343) PPAR5 is involved in the action of the tumour promoter, PMA.

0Thus, a fifth aspect of the invention provides a method of treating or preventing O' cancer in a patient, the method comprising administering to the patient an effective 00 Samount of an inhibitor of PPARS activity.

The method of the invention is particularly suited for use in relation to cancers of the skin.

The method of the invention is also particularly suited for use in relation to cancers of the breast.

The method of the invention is also particularly suited for use in relation to cancers of the colon.

The method of the invention is also particularly suited for use in relation to cancers of the prostate.

A sixth aspect of the invention provides a method of treating or preventing Alzheimer's disease in a patient, the method comprising administering to the patient an effective amount of an inhibitor of PPAR5 activity.

Inhibition of PPAR8 may prevent neurodegeneration caused by glial cells that form foam cells during normal ageing. These foam cells are thought to be promoted by high fat diets (Mato M. et al Proc. Natl. Acad. Sci. USA 93. 3269-3274 (1996)).

It is known that ApoE (apolipoprotein E) is protective in Alzheimer's diseases and we show in the Examples that ApoE is repressed by fatty acids and PPAR5. Without being bound by any theory, we believe that this may be a mechanism by which high fat diets promote dementia, and antagonism of this process may be beneficial( Kalmijn S et al Annals of Neurology 42, 776-782 (1997)).

By "an effective amount of an inhibitor of PPAR5 activity" we include the meaning an amount which is effective to prevent or reduce foam cell development from macrophages or other cells, or remove foam cells and, in particular, an amount which is effective to prevent the disease (by which we include the prevention of the progression from an asymptomatic state to a symptomatic state) or treat the disease (by which we include ameliorating the symptoms and slowing its progression) to a clinically useful extent. An extent which is clinically useful may readily be determined by the physician.

By "an inhibitor of PPAR5 activity" we mean any suitable inhibitor which may reduce PPARS activity in the cell, for example in the cell of a patient. It is particularly preferred that the inhibitor of PPARS activity is one which inhibits PPARS activity in a 00 0 O macrophage cell or a foam cell derived from a macrophage cell. The term "inhibitor of PPAR6 activity" includes compounds which block the effect of PPAR5 asonists.

It is preferred if the inhibitor of PPAR5 activity is selective for PPAR5. In particular, it is preferred that the inhibitor is effective in inhibiting PPAR5 activity but is S 5 substantially incapable of inhibiting the activity of other PPAR isoforms such as PPARa or PPARy. Although it is preferred that the inhibitor of PPAR8 activity does not modify the activity of other PPAR isoforms, it may be advantageous if the molecule is an agonist 00 or activator of PPARy activity. It is also preferred if the inhibitor of PPAR5 activity does Snot modify the activity of other steroid hormone receptor family receptors. By "selective" we mean that the compound is at least ten-fold more effective in inhibitins activity than it is in modifying the activity of another PPAR isoform. Preferably 00 it is at least 100-fold more selective.

The inhibitor may be one which prevents the expression of PPAR8 in a cell. By prevents the expression" we mean substantially prevents expression or at least reduces the level of expression of PPAR5 to a useful extent. Typically, the compound which prevents the expression of PPARS in a cell is a nucleic-acid based molecule.

As is shown in the Examples, we have demonstrated that the use of the antisense of the entire human PPAR5 coding sequence, including portions of untranslated regions, is able to inhibit foam cell formation from macrophages. It will be appreciated that smaller portions of the PPAR5 cDNA may be used as antisense agents, especially those corresponding to the start of translation of the PPAR5 protein.

Antisense molecules may be designed by reference to the PPAR5 sequence, the human cDNA sequence of which is given in Schmidt et al (1992) Mol. Endocrinol. 6, 1634-1641 and in GenBank Accession No. L07592.

PPAR5 antisense agents include agents which bind to PPAR5 mRNA and, preferably, inhibits its translation. By "antisense agent" we also include nucleic acid based molecules which are able to form triplexes with PPAR5 genomic sequence and prevent selectively transcription or translation of the gene.

The antisense molecule may be RNA (in which case it is transcribed from a vector designed to produce antisense transcripts) or it may be DNA or DNA-like molecules, such as antisense oligonucleotides.

It is believed that over-expression of anti-sense RNA from suitable portions of human genomic sequences corresponding to positions 67886 to 139948 of the human PAC clone No. 109F14 will be effective in inhibiting PPAR S activity. PAC Clone No.

109F14 is available from the HGMP Resource Centre, Genome Campus, Hinxton.

Cambridgeshire, CB 10 ISB, UK. PPAR5 gene sequence has Accession No. AL022721.

Antisense oligonucleotides can be designed by reference to the PPAR6 cDNA or gene sequence.

Oligonucleotides are subject to being degraded or inactivated bv cellular endogenous nucleases. To counter this problem, it is possible to use modified oligonucleotides, eg having altered intemucleotide linkages, in which the naturally occurring phosphodiester linkages have been replaced with another linkage. For example, Agrawal et al (1988) Proc.

Natl. Acad. Sci. USA 85, 7079-7083 showed increased inhibition in tissue culture of HFV- I 00 0 using oligonucleotide phosphoramidates and phosphorothioates. Sarin et al (1988) Proc.

N Natl. Acad. Sci. USA 85, 7448-7451 demonstrated increased inhibition of HIV-1 using oligonucleotide methylphosphonates. Agrawal et al (1989) Proc. Natl. Acad. Sci. USA 86, 7790-7794 showed inhibition of HrV-1 replication in both early-infected and chronically I 5 infected cell cultures, using nucleotide sequence-specific oligonucleotide phosphorothioates.

Leither et al (1990) Proc. Natl. Acad. Sci. USA 87, 3430-3434 report inhibition in tissue culture of influenza virus replication by oligonucleotide phosphorothioates.

0 Oligonucleotides having artificial linkages have been shown to be resistant to degradation in vivo. For example, Shaw et al (1991) in Nucleic Acids Res. 19, 747-750, report that otherwise unmodified oligonucleotides become more resistant to nucleases in vivo when they are blocked at the 3'end by certain capping structures and that uncapped I oligonucleotide phosphorothioates are not degraded in vivo.

A detailed description of the H-phosphonate approach to synthesizing oligonucleoside phosphorothioates is provided in Agrawal and Tang (1990) Tetrahedron Letters 31. 7541-7544, the teachings of which are hereby incorporated herein by reference.

Syntheses of oligonucleoside methylphosphonates, phosphorodithioates. phosphoramidates, phosphate esters, bridged phosphoramidates and bridge phosphorothioates are known in the art. See, for example, Agrawal and Goodchild (1987) Tetrahedron Letters 28, 3539: Nielsen et al (1988) Tetrahedron Letters 29, 2911; Jager et al (1988) Biochemistry 27, 7237; Uznanski et al (1987) Tetrahedron Letters 28, 3401; Bannwarth (1988) Helv. Chim. Acta.

71, 1517; Crosstick and Vyle (1989) Tetrahedron Letters 30, 4693; Agrawal et al (1990) Proc. Natd. Acad. Sci. USA 87, 1401-1405, the teachings of which are incorporated herein by reference. Other methods for synthesis or production also are possible. In a preferred embodiment the oligonucleotide is a deoxyribonucleic acid (DNA), although ribonucleic acid (RNA) sequences may also be synthesized and applied.

The oligonucleotides useful in the invention preferably are designed to resist degradation by endogenous nucleolytic enzymes. In vivo degradation of oligonucleotides produces oligonucleotide breakdown products of reduced length. Such breakdown products are more likely to engage in non-specific hybridization and are less likely to be effective, relative to their full-length counterparts. Thus, it is desirable to use oligonucleotides that are resistant to degradation in the body and which are able to reach the targeted cells. The present oligonucleotides can be rendered more resistant to degradation in vivo by substituting one or more internal artificial intemucleotide linkages for the native phosphodiester linkages, for example, by replacing phosphate with sulphur in the linkage.

Examples of linkages that may be used include phosphorothioates, methylphosphonates, sulphone, sulphate, ketyl, phosphorodithioates, various phosphoramidates, phosphate esters, bridged phosphorothioates and bridged phosphoramidates. Such examples are illustrative, rather than limiting, since other intemucleotide linkages are known in the art. See, for example, Cohen, (1990) Trends in Biotechnology. The synthesis of oligonucleotides having one or more of these linkages substituted for the phosphodiester intemucleotide linkages is well known in the art, including synthetic pathways for producing oligonucleotides having mixed intemucleotide linkages.

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Oligonucleotides can be made resistant to extension by endogenous enzymes by "capping" or incorporating similar groups on the 5' or 3' terminal nucleotides. A reagent for capping is commercially available as Amino-Link 1 IT' from Applied BioSystems Inc, Foster City, CA. Methods for capping are described, for example, by Shaw et al (1991) Nucleic C 5 Acids Res. 19, 747-750 and Agrawal et al (1991) Proc. Natl. Acad. Sci. USA 88(17), 7595- 7599, the teachings of which are hereby incorporated herein by reference.

A further method of making oligonucleotides resistant to nuclease attack is for them 00 to be "self-stabilized" as described by Tang et al (1993) Nucl. Acids Res. 21, 2729-2735 incorporated herein by reference. Self-stabilized oligonucleotides have hairpin loop S 10 structures at their 3' ends, and show increased resistance to degradation by snake venom I phosphodiesterase, DNA polymerase I and fetal bovine serum. The self-stabilized region of 00 the oligonucleotide does not interfere in hybridization with complementary nucleic acids.

Sand pharmacokinetic and stability studies in mice have shown increased in vivo persistence CN, of self-stabilized oligonucleotides with respect to their linear counterparts.

In accordance with the invention, the inherent binding specificity of antisense oligonucleotides characteristic of base pairing is enhanced by limiting the availability of the antisense compound to its intended locus in vivo, permitting lower dosages to be used and rmnimizing systemic effects. Thus, oligonucleotides are applied locally to achieve the desired effect. The concentration of the oligonucleotides at the desired locus is much higher than if the oligonucleotides were administered systemically, and the therapeutic effect can be achieved using a significantly lower total amount. The local high concentration of oligonucleotides enhances penetration of the targeted cells and effectively blocks translation of the target nucleic acid sequences.

The oligonucleotides can be delivered to the locus by any means appropriate for localized administration of a drug. For example, a solution of the oligonucleotides can be injected directly to the site or can be delivered by infusion using an infusion pump. The oligonucleotides also can be incorporated into an implantable device which when placed at the desired site, permits the oligonucleotides to be released into the surrounding locus.

The oligonucleotides are most preferably administered via a hydrogel material. The hydrogel is rioninflammatory and biodegradable. Many such materials now are known, including those made from natural and synthetic polymers. In a preferred embodiment, the method exploits a hydrogel which is liquid below body temperature but gels to form a shape-retaining semisolid hydrogel at or near body temperature. Preferred hydrogel are polymers of ethylene oxide-propylene oxide repeating units. The properties of the polymer are dependent on the molecular weight of the polymer and the relative percentage of polyethylene oxide and polypropylene oxide in the polymer. Preferred hydrogels contain from about 10 to about 80% by weight ethylene oxide and from about 20 to about 90% by weight propylene oxide. A particularly preferred hydrogel contains about 70% polyethylene oxide and 30% polypropylene oxide. Hydrogels which can be used are available, for example, from BASF Corp.. Parsippany, NJ, under the tradename PluronicT.

In this embodiment, the hydrogel is cooled to a liquid state and the oligonucleotides are admixed into the liquid to a concentration of about Img oligonucleotide per gram of hydrogel. The resulting mixture then is applied onto the surface to be treated, for example 00 0O O by spraying or painting during surgery or using a catheter or endoscopic procedures. As the polymer warms, it solidifies to form a gel, and the oligonucleotides diffuse out of the gel into the surrounding cells over a period of time defined by the exact composition of the gel.

The oligonucleotides can be administered by means of other implants that are commercially available or described in the scientific literature, including liposomes, microcapsules and implantable devices. For example, implants made of biodegradable materials such as polyanhydrides, polyorthoesters, polylactic acid and polyglycolic acid and 00 copolymers thereof, collagen, and protein polymers, or non-biodegradable materials such as r ethylenevinyl acetate (EVAc), polyvinyl acetate, ethylene vinyl alcohol, and derivatives C 10 thereof can be used to locally deliver the oligonucleotides. The oligonucleotides can be incorporated into the material as it is polymerized or solidified, using melt or solvent 00 evaporation techniques, or mechanically mixed with the material. In one embodiment, the oligonucleotides are mixed into or applied onto coatings for implantable devices such as C dextran coated silica beads, stents, or catheters.

The dose of oligonucleotides is dependent on the size of the oligonucleotides and the purpose for which is it administered. In general, the range is calculated based on the surface area of tissue to be treated. The effective dose of oligonucleotide is somewhat dependent on the length and chemical composition of the oligonucleotide but is generally in the range of about 30 to 3 0004g per square centimetre of tissue surface area.

The oligonucleotides may be administered to the patient systemically for both therapeutic and prophylactic purposes. The oligonucleotides may be administered by any effective method, for example, parenterally (eg intravenously, subcutaneously, intramuscularly) or by oral, nasal or other means which permit the oligonucleotides to access and circulate in the patient's bloodstream. Oligonucleotides administered systemically preferably are given in addition to locally administered oligonucleotides, but also have utility in the absence of local administration. A dosage in the range of from about 0. 1 to about 10 grams per administration to an adult human generally will be effective for this purpose.

In addition to the antisense agents described above, ribozymes, in particular hammerhead ribozymes, can be designed based on the PPAR5 cDNA or gene sequence which are believed to be useful as inhibitors of PPAR5 activity.

Ribozymes which may be encoded in the nucleic acid to be delivered to the target are described in Cech and Herschlag "Site-specific cleavage of single stranded DNA" US 5,180,818; Altman et a! "Cleavage of targeted RNA by RNAse P" US 5,168,053, Cantin et al "Ribozyme cleavage of HIV-1 RNA" US 5.149,796; Cech et al "RNA ribozyme restriction endoribonucleases and methods", US 5,116,742: Been et al "RNA ribozyme polymerases, dephosphorylases, restriction endonucleases and methods", US 5,093,246; and Been et al "RNA ribozyme polymerases, dephosphorylases, restriction endoribonucleases and methods: cleaves single-stranded RNA at specific site by transesterification". US 4,987,071, all incorporated herein by reference. Suitable targets for ribozymes include transcription factors such as c-fos and c-myc. and bcl-2. Durai et al (1997) Anticancer Res. 17, 3307-3312 describes a hammerhead ribozyme against bcl- 2.

00 Genetic constructs which express the ribozymes or antisense compounds useful in C, the methods of the invention may readily be made. Suitably. the genetic constructs are ones which are adapted to deliver and express the ribozyme or antisense molecule in the target cell. Thus, the method of the invention comprises a method of gene therapy.

Gene therapy may be carried out according to generally accepted methods, for example, as described by Friedman, 1991. A virus or plasmid vector (see further details below), containing a copy of the gene encoding the ribozyme or antisense molecule linked to expression control elements and capable of replicating inside the target cells, is 0 prepared. Suitable vectors are known, such as disclosed in US Patent 5,252,479 and ro International Patent Application Publication Number WO 93/07282 (Boehringer g Ingelheim International GmbH). The vector is then injected into the patient, either CM locally at the site of the target or systemically. If the transfected gene is not permanently 0 incorporated into the genome of each of the targeted cells, the treatment may have to be 0 repeated periodically.

Gene transfer systems known in the art may be useful in the practice of the gene therapy methods of the present invention. These include viral and nonviral transfer methods. A number of viruses have been used as gene transfer vectors, including papovaviruses, eg SV40 (Madzak et al, 1992), adenovirus (Berkner, 1992; Berkner er al, 1988; Gorziglia and Kapikian, 1992; Quantin et al, 1992; Rosenfeld et a, 1992; Wilkinson et al, 1992; Stratford-Perricaudet et al, 1990), vaccinia virus (Moss, 1992), adeno-associated virus (Muzyczka, 1992; Ohi et al, 1990), herpesviruses including HSV and EBV (Margolskee, 1992; Johnson et al, 1992; Fink et al, 1992; Breakfield and Geller, 1987; Freese et al, 1990), and retroviruses of avian (Brandyopadhyay and Ternin, 1984; Petropoulos et al., 1992), murine (Miller, 1992: Miller et al. 1985: Sorge e al, 1984; Mann and Baltimore, 1985; Miller et al, 1988), and human origin (Shimada er al.

1991; Helseth er al, 1990; Page et al, 1990; Buchschacher and Panganiban, 1992). To date most human gene therapy protocols have been based on disabled murine retroviruses. Lentivirus-based vectors are preferred.

Nonviral gene transfer methods known in the art include chemical techniques such as calcium phosphate coprecipitation (Graham and van der Eb, 1973; Pellicer er al 1980); mechanical techniques, for example microinjection (Anderson et al, 1980; Gordon et al, 1980; Brinster er al, 1981; Constantini and Lacy, 1981); membrane fusion-mediated transfer via liposomes (Felgner et al, 1987; Wang and Huang, 1989; Kaneda et al, 1989: Stewart et al, 1992; Nabel et al. 1990; Lim er al. 1992); and direct DNA uptake and receptor-mediated DNA transfer (Wolff etal. 1990; Wu et al, 1991; Zenke et al, 1990: Wu et al, 1989b; Wolff er al, 1991; Wagner et al, 1990; Wagner et al, 1991; Cotten et al.

1990; Curiel et al, 1991 a; Curiel er al, 1991b). Viral-mediated gene transfer can be combined with direct in vivo gene transfer using liposome delivery, allowing one to direct the viral vectors to the tumour cells and not into the surrounding nondividin2 cells.

Alternatively, the retroviral vector producer cell line can be injected into tumours (Culver et al. 1992). Injection of producer cells would then provide a continuous source of vector particles. This technique has been approved for use in humans with inoperable brain tumours.

00 Other suitable systems include the retroviral-adenoviral hybrid system described by Feng et al (1997) Nature Biotechnology 15, 866-870, or viral systems with targeting ligands such as suitable single chain Fv fragments.

In an approach which combines biological and physical gene transfer methods, plasmid DNA of any size is combined with a polylysine-conjugated antibody specific to the adenovirus hexon protein, and the resulting complex is bound to an adenovirus vector.

The trimolecular complex is then used to infect cells. The adenovirus vector permits OO efficient binding, internalization, and degradation of the endosome before the coupled DNA is damaged.

'N 10 Liposome/DNA complexes have been shown to be capable of mediating direct in vivo gene transfer. While in standard liposome preparations the gene transfer process is 00 nonspecific, localized in vivo uptake and expression have been reported in tumour deposits, for example, following direct in situ administration (Nabel, 1992).

N Gene transfer techniques which target DNA directly to macrophages is preferred.

Receptor-mediated gene transfer, for example, is accomplished by the conjugation of DNA (usually in the form of covalently closed supercoiled plasmid) to a protein ligand via polylysine. Ligands are chosen on the basis of the presence of the corresponding ligand receptors on the cell surface of the target cell/tissue type. The mannose receptor is rather specific for macrophages and specific targeting of DNA/mannose conjugates has been demonstrated. These ligand-DNA conjugates can be injected directly into the blood if desired and are directed to the target tissue where receptor binding and internalization of the DNA-protein complex occurs. To overcome the problem of intracellular destruction of DNA, coinfection with adenovirus can be included to disrupt endosome function.

In a further embodiment, the compound is one which inhibits the activity of PPARS protein activity.

Suitable compounds may be selected using some of the methods described below.

It will be appreciated that the effective amount of an inhibitor of PPAR6 activity may be administered to the patient in any suitable way and in any suitable formulation.

Suitability of any method of administration or of any formulation may readily be determined by the skilled person by reference to the nature of the inhibitor. For example nucleic acid-based inhibitors may be formulated and administered in different ways to small molecule-based inhibitors as is known in the art.

The aforementioned compounds of the invention or compounds for use in the methods of the invention or a formulation thereof may be administered by any conventional method including oral and parenteral (eg subcutaneous, intravenous, or intramuscular) injection. The treatment may consist of a single dose or a plurality of doses over a period of time.

Typical doses are expected to be in the range 0.01-20mg/kg.

Whilst it is possible for a compound of the invention to be administered alone, it is preferable to present it as a pharmaceutical formulation, together with one or more acceptable carriers. The carrier(s) must be "acceptable" in the sense of being compatible 00 with the compound of the invention and not deleterious to the recipients thereof. Typically.

the carriers will be water or saline which will be sterile and pyrogen free.

The formulations may conveniently be presented in unit dosage form and may be prepared by any of the methods well known in the art of pharmacy. Such methods include 5 the step of bringing into association the active ingredient (compound of the invention or compound for use in the methods of the invention) with the carrier which constitutes one or more accessory ingredients. In general the formulations are prepared by uniformly and 00 intimately bringing into association the active ingredient with liquid carriers or finely divided solid carriers or both, and then, if necessary, shaping the product.

Formulations in accordance with the present invention suitable for oral administration may be presented as discrete units such as capsules, cachets or tablets, each 00 containing a predetermined amount of the active ingredient; as a powder or granules; as a solution or a suspension in an aqueous liquid or a non-aqueous liquid; or as an oil-in-water Cliquid emulsion or a water-in-oil liquid emulsion. The active ingredient may also be presented as a bolus, electuary or paste.

A tablet may be made by compression or moulding, optionally with one or more accessory ingredients. Compressed tablets may be prepared by compressing in a suitable machine the active ingredient in a free-flowing form such as a powder or granules, optionally mixed with a binder (eg povidone, gelatin, hydroxypropylmethyl cellulose).

lubricant, inert diluent, preservative, disintegrant (eg sodium starch glycolate, cross-linked povidone, cross-linked sodium carboxymethyl cellulose), surface-active or dispersing agent.

Moulded tablets may be made by moulding in a suitable machine a mixture of the powdered compound moistened with an inert liquid diluent. The tablets may optionally be coated or scored and may be formulated so as to provide slow or controlled release of the active ingredient therein using, for example, hydroxypropylmethylcellulose in varying proportions to provide desired release profile.

Formulations suitable for parenteral administration include aqueous and nonaqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats and solutes which render the formulation isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents. The formulations may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilised) c6ndition requiring only the addition of the sterile liquid carrier, for example water for injections, immediately prior to use. Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets of the kind previously described.

Preferred unit dosage formulations are those containing a daily dose or unit. daily sub-dose or an appropriate fraction thereof, of an active ingredient.

It should be understood that in addition to the ingredients particularly mentioned above the formulations of this invention may include other agents conventional in the art having regard to the type of formulation in question. for example those suitable for oral administration may include flavouring agents.

The formulations mentioned herein are carried out using standard methods such as those described or referred to in reference texts such as the British and US 00

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SPharmacopoeias, Remington's Pharmaceutical Sciences (Mack Publishing Co.) Martindale The Extra Pharmacopoeia (London, The Pharmaceutical Press).

The therapeutic methods of the invention may be used to treat any mammal including humans. Thus, it is envisaged that the method may be used to treat, by way of example, domestic animals such as cats and dogs, or farm animals such as horses, cows, sheep, goats and pigs, or other commercially important mammals. When the inhibitor of PPARS activity is a nucleic acid-based molecule it will be appreciated that it will be 00 designed by reference to the mammal's PPAR5 gene or cDNA.

SIt is preferred that the patient to be treated is a human patient.

A further aspect of the invention provides an inhibitor of PPAR5 activity for use in medicine.

00 The inhibitor is packaged and presented for use in medicine. In particular, it may be packaged and presented for use in treating atherosclerosis, or in treating heart disease 1or treating stroke or treating peripheral artery disease or treating vascular disease associated with plaque formation or treating thrombotic blockage of blood vessels or treating Alzheimer's disease or treating cancer.

-A still further aspect of the invention provides a pharmaceutical composition comprising an inhibitor of PPAR5 activity and a pharmaceutically-acceptable carrier.

Yet still further aspects of the invention provide use of an inhibitor of PPARS activity in the manufacture of a medicament for preventing or reducing foam cell development from macrophages or other cells, or removing foam cells, in a patient; use of an inhibitor of PPAR5 activity in the manufacture of a medicament for preventing or treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels; use of an inhibitor of PPAR6 activity in the manufacture of a medicament for treating or preventing cancer; and use of an inhibitor of PPAR5 activity in the manufacture of a medicament for treating or preventing Alzheimer's disease.

Suitably, the macrophages or other cells are those involved in atherosclerotic pathology.

Until the present work, it was not envisaged that inhibitors of PPARS activity would be useful, particularly in medicine. The invention also includes methods of identifying compounds which inhibit PPAR5 activity and, in particular, which inhibit PPARS activity in macrophage cells or in foam cells. The compounds so-identified may themselves be useful in medicine or they may be useful as lead compounds for further development into medically useful compounds. These methods of the invention, or means for carrying out such methods, may be considered to be "drug screening methods" or "drug screening assays".

One aspect of the invention provides a method of identifying a compound which may. or which can be used as a lead compound to produce a compound which may, be useful in medicine the method comprising selecting a compound which inhibits

PPARB

activity. Typically, the method may involve the screening of a number of test compounds which are present in a library of test compounds. Thus. a further aspect of the invention provides a method of identifying a compound which inhibits PPAR5 activity the method 00 0 comprising selecting from a library of test compounds any compound which inhibits C"1 PPAR5 activity.

The above-mentioned methods may be used to select compounds which inhibit gene expression or the production of PPAR5 protein (ie translation) in a cell or which inhibit the PPAR5 protein activity.

I Suitable assay formats are well known to the person skilled in the art, and some of them are described in more detail in Example 3.

0 In relation to identifying compounds which inhibit PPAR5 gene expression, a S preferred embodiment involves using the PPAR5 gene promoter operatively linked to a reporter gene such as, for example, luciferase, 1-galactosidase, alkaline phosphatase or the like. The expression of the reporter gene in a cell may be measured in the presence or absence of a test compound. Test compounds which selectively reduce the expression of 0 the reporter gene are selected as compounds which may be useful in inhibiting or Sreducing expression of the PPAR5 gene so that there is inhibition of PPAR5 activity.

In relation to compounds which inhibit PPARS protein activity, one particular activity which it is desirable to inhibit is the ability of the PPAR5 protein to transcriptionally activate genes under its control. Thus, in one embodiment, a reporter gene, such as one of those listed above, is operatively linked to a promoter or enhancer sequence which is under the control of PPAR8. Genes which are under the control of PPAR8 include CYP4A6, acyl CoA oxidase and lipoprotein lipase; thus, the promoters of these genes are believed to be useful in this embodiment of the invention. Synthetic enhancer elements derived from these genes, linked to heterologous promoters such as from the HSV thymidine kinase gene, may also be useful in this embodiment. A genetic construct containing the promoter or enhancer/reporter gene is transfected into a suitable cell such as a monocyte or macrophage cells. COS-1 or CV-1 cells, both sublines of African Green Monkey kidney cells, may also be used. A genetic construct encoding PPARS is also transfected into the cell and the ability of a test compound to inhibit the expression of the reporter gene is assessed. In a particularly preferred embodiment, the transfected cells would be incubated with a known PPAR5 agonist such as Compound

F

as disclosed on page 9 of WO 97/28149 (hereinafter referred to as Compound F) in combination with the test compound and the ability of the test compound to interfere with the action of the agonist would be determined. Compounds which reduce or inhibit the expression of the reporter gene are selected for further study.

In a further embodiment, a CARLA (co-activator/receptor/ligand interaction assay) may be used as described in Example 3. These assays rely on the dependence of the binding of co-receptors on the presence of a suitable ligand for PPAR5. In the CARLA assays, an agonist is present and the ability of the test compound to interfere with the action of the agonist is assessed.

Particularly preferred compounds which may be selected by the methods of the invention are those which bind to the ligand binding portion of PPAR6 in a transcriptionally futile manner and thereby prevent the action of agonistic ligands of 00 O In one embodiment of the invention, it is preferred if a "pre-screening" step is carried out to identify compounds bind to PPAR5 before determining whether they are an Sinhibitor or antagonist of PPAR5 activity. Receptor-ligand binding assays are well known in the art and can readily be devised and executed by the suitably skilled person.

ND 5 In a further, preferred embodiment, a "pre-screening" step may be carried out which is essentially the foam cell assay described below. Thus, in this way compounds may be selected which are active in preventing or reducing foam cell development from 00 macrophages or other cells or remove foam cells, and which are inhibitors of SSuitably, the macrophages or other cells are those involved in atherosclerotic pathology.

In a further embodiment, PPAR5 inhibitors may be identified using a two-hybrid 00 approach to monitor the interaction of PPAR5 and co-activators such as SRC-I. In this case, PPARA (or a functional portion thereof) is fused to a DNA binding protein (such as NC( the DNA binding domain of GAL4) and the co-activator molecule or a functional portion thereof (such as SRC-I) would be fused to a transactivating protein (such as the transactivation domain of VP16). Yeast expressing both of these fusions and having an integrated reporter gene (such as p-galactosidase) under the control of a DNA binding protein-dependent (eg GAL4-dependent) promoter are generated.

The yeast are grown in the presence of a PPAR5 agonist and a wide range of test compounds. Cultures with low P-galactosidase activity indicate the presence of a antagonist.

It will be appreciated that the methods of identifying a compound as described above are useful in identifying compounds which may, or which can be used as a lead compound to produce a compound which may, prevent or reduce foam cell development from macrophages or remove foam cells, prevent or be useful in treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels, prevent or be useful in treating cancer, or prevent or be useful in treating Alzheimer's disease.

In further embodiments of the invention once a compound has been selected for its ability to inhibit or reduce PPAR5 activity, it may conveniently be used in a further screen to determine, for example, whether it may prevent or reduce foam cell development from macrophages or other cells, or remove foam cells, whether it may prevent or is useful in treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels, or prevent or is useful in treating cancer, or prevent or is useful in treating Alzheimer's disease.

Suitably, the macrophages or other cells are those involved in atherosclerotic pathology.

Screening methods to determine these properties are known from this application (in relation to foam cell development from macrophages) or are known in the art.

Other, further, useful screens may be carried out on the selected compound to determine, for example, its solubility, its pharmacological profile and drug metabolism profile. Similarly, screens may be carried out to determine the compounds selectivity for inhibiting PPAR5 activity. For example, screens may be carried out to determine 00 O whether a particular compound may modify the activity of another PPAR isoform.

Typically, it is preferred if compounds are selected which substantially do not modify the Ct activity of other PPAR isoforms. However, it may be advantageous if the compound which is selected is one which inhibits PPAR8 activity but is an agonist or activator of 0 5 PPARy activity. Equally, it may be advantageous if the compound which is selected is one which inhibits PPAR8 activity but is an activator or agonist of PPARa activity.

The compound selected in the screening methods of the invention may be a "drug- 00 like compound".

The term "drug-like compound" is well known to those skilled in the an, and may C 10 include the meaning of a compound that has characteristics that may make it suitable for use in medicine, for example as the active ingredient in a medicament. Thus, for 00 example, a drug-like compound may be a molecule that may be synthesised by the techniques of organic chemistry, less preferably by techniques of molecular biology or biochemistry, and is preferably a small molecule, which may be of less than 5000 daltons molecular weight and which may be water-soluble. A drug-like compound may additionally exhibit features of selective interaction with a particular protein or proteins and be bioavailable and/or able to penetrate target cellular membranes, but it will be appreciated that these features are not essential.

The term "lead compound" is similarly well known to those skilled in the art, and may include the meaning that the compound, whilst not itself suitable for use as a drug (for example because it is only weakly potent against its intended target, non-selective in its action, unstable, poorly soluble, difficult to synthesise or has poor bioavailability) may provide a starting-point for the design of other compounds that may have more desirable characteristics.

The terms "drug-like compound" and "lead compound" typically refer to relatively small organic molecules rather than, for example, relatively large nucleic acid-based molecules. Nevertheless, it will be appreciated that many embodiments of the screening methods of the invention are suitable for identifying nucleic acid-based molecules, particularly those which inhibit expression of the PPAR5 gene or translation of the PPAR8 protein.

As is well known in the art of drug discovery, a lead compound found in a screen may be modified and the modified compound screened to determine its activity.

The invention also relates to an in vitro model for dietary fat-induced foam cell formation and its use in identifying useful compounds.

Foam cell formation is in the first step a two step process wherein the cell is converted into a foam cell precursor by being subjected to an inflammatory stimulus such as PMA or by being brought into contact with a suitable growth factor such as GMCSF (Granulocyte macrophage colony stimulating factor). In the second step the precursor cells become foam cells in the presence of a suitable concentration of fatty acids.

Thus, a further aspect of the invention provides a method of identifying a compound which may, or which can be used as a lead compound to produce a compound which may, prevent or reduce foam cell development from macrophages or other cells, suitably those macrphages or other cells involved in atherosclerotic pathology, or 00

O

0 remove foam cells or prevent or be useful in treating a vascular disease associated c I with plaque formation and/or thrombotic blockage of the blood vessels, the method comprising the steps of selecting: a suitable primary cell population or cell line, supplying to the cell line an inflammatory stimulus or growth factor which facilitates differentiation to a foam cell precursor, supplying to the foam cell precursor a suitable concentration of fatty acid, and 00 measuring the accumulation of fatty acid in the cell in the presence or absence of the compound.

A suitable primary cell population or cell line is that involved in atherosclerotic pathology.

OO The cell type may be any suitable cell type. Preferably, it is a leukocyte cell. It is Sparticularly preferred that the leukocyte cell line is a macrophage or macrophage precursor cell line.

Typically, the cells are THP-I or U937. THP- is available as ECACC cell deposit No. 85011440, and U937 is available as ECACC cell deposit No. 88081201. However, any suitable leukocyte cell may be used, although it is preferred if a monocytic or macrophagelike cell is used. THP-1 cells are "monocyte-like" and can be differentiated to macrophagelike cells by phorbol ester (PMA).

By "supplying an inflammatory stimulus to the cell" we include the supply of any suitable inflammatory stimulus which facilitates stimulation of the cells into foam cells.

By "growth factor which facilitates the differentiation to foam cells" we include any suitable growth factor such as GMCSF and, in the context of the invention, PMA. PMA or a functionally equivalent phorbol ester is preferred.

Typically, the phorbol ester is PMA but it may be any suitable phorbol ester which facilitates the differentiation of the cells.

Typically, PMA is used at a concentration of between 0.1 to 0ng/ml.

The fatty acid may be supplied to the cell in the serum in which the cell is growing.

We have found that heat inactivated fetal calf serum from Gibco BRL gives a low background of lipid accumulation, whereas a high level of lipid accumulation is achieved using Controlled Process Serum Replacement (CPSR-3) from Sigma. Alternatively, it may be supplied (for example by adding to the growth culture medium) in a suitable c6ncentration. Suitable fatty acids include mono- and polyunsaturated fatty acids of chain lengths 18-22, including linoleic acid. Suitably, the fatty acids are supplied at a concentration of between 10 to 100M.

Accumulation of fatty acid in the cell may be measured using any suitable method.

Particularly convenient methods involve the use of fatty acid stains such as Nile Red or Oil Red O which can be used in situ and read with a plate reader. Other methods which can be used to measure accumulation of fatty acids include TLC, HPLC, and LC-MS.

The accumulation of fatty acid in the cell in the presence or absence of test compound is assessed and compounds which lead to a reduction in the accumulation of fatty acid in the cell are selected for further testing.

00 O It will readily be appreciated that since the cells can be grown in multi-cell culture Sdishes (eg 64 cell culture dishes) and since the lipid staining can be quantitated, for example optically in a microtitre plate reader, the screening method may readily be automated for high throughput screening.

O 5 Further aspects of the invention provide compounds identifiable by the screening methods of the invention; such compounds identifiable by these methods of the invention for use in medicine; and pharmaceutical compositions of such compounds further comorising a 00 pharmaceutically acceptable carrier.

The compounds identified and identifiable by the screening methods of the invention are believed to be useful in the methods of treatments of the invention.

The invention will now be described in more detail by reference to the following 00 Description, Examples and Figures wherein: Figure 1 shows the expression of PPARs in THP-1 cells. RNAase expression analysis for PPARa and 6 mRNAs was performed on total RNA from mouse and human liver and several human cell lines. The Huh7 cell line is a human liver cell line that contains identical amounts of PPAR8 (black bars) and a (white bars) mRNA when compared to total RNA isolated from human liver of actin). Both Huh7 and human liver do not respond to peroxisome proliferators in terms of increases in lipid metabolism and transcription from PPRE containing reporter constructs. Monocytic cell lines such as U937 and THP-1 cells express relatively high levels of PPAR5 of actin). Other human tissues were analysed for a and 6 expression such as colon, ovary, testes, kidney, adrenal. In all cases the expression levels were less than 1% of actin (data not shown).

However, it is possible that individual cell components of these complex tissues express significant levels of these receptors.

Figure 2 shows atherogenic gene expression in THP-I cells. Total RNA from THP-1 cells was analysed by RT-PCR for the expression of various gene products associated with the atherogenic process. Shown are ethidium bromide-stained agarose gels of the analysis of THP-I cells in the normal growing conditions adherent THP-1 cells after phorbol ester treatment (+PMA) and phorbol ester treatment in the presence of 100M linoleic acid. All probes were designed to cross intron/exon boundaries and did not amplify genomic DNA.

Figure 3 shows that fatty acids and rexinoids promote the formation of foam cells that aie inhibited by rosiglitazone. Rexinoids are drugs specific for RXR. such as 9-cisretinoic acid and the Ligand Pharmaceutical compound. LG 100268 (Mlukherjee R et al..

1997 Nature 386. 407-410). Rosiglitazone is made by SmithKline Beecham and is also known as Avandia and BRL49653.

A. Fairy acid co-operate with rexinoids in foam cellformation.

THP- cells were treated with 5ng/ml PMA and DMSO (dimethyl sulphoxide: linoleic acid (30 AM), LG 100268 (5 AM) and linoleic acid with LG 100268. Treatment was continued for 3 days and the cells fixed in 0.66M paraformaldehyde; stained with a saturating solution of Oil Red O and then counterstained with haematoxylin. Increased lipid accumulation is observed with treatment with either linoleic acid or LG 100268.

Addition of both compounds produces an additive effect on lipid accumulation.

17 00 0 B. Rosiglitazone promotes lipid clearance.

PMA treated THP-1 cells were treated with 20LM BRL49653 for 3 days and Sstained for lipid accumulation as described above.

Figure 4 shows that rosiglitazone modulates gene expression in THP- cells.

A. IL-Ilf expression is reduced by rosiglitazone.

RNase protection analysis of interleukin 13 mRNA levels in PMA treated THP-I cells PMA and linoleic acid treated cells (+PMA+FA), and PMA and BRL49653 00 treated cells (+PMA+BRL). Also shown is the actin normalisation signal.

B. TNFa expression is reduced by rosiglitazone.

CI 10 RNase protection analysis of TNFct mRNA levels in control THP-I cells PMA treated cells PMA and linoleic acid treated cells (+PMA+FA), and PMA and 00 BRL49653 treated cells (+PMA+BRL). Also shown is the actin normalisation signal.

C. CD36 expression is increased by rosiglitazone.

CI1 Fluorescence Activated Cell Sorting (FACS) analysis of CD36 antigen expression in control THP-I cells and PMA and BRL49653 treated cells (+PMA+BRL).

Treatment was for 48 hours at 50ipM BRL49653. Cells were scraped from the culture plates, fixed and incubated with a FITC (fluorescein isothiocyanate) conjugated CD36 antibody (Coulter Immunotech). FACS analysis was performed using a Coulter EPIC V cell sorter.

Figure 5 shows the generation of cell lines constitutively expressing PPARS. The entire coding sequence of human PPAR5 was subcloned into the eukaryotic expression vector pCLDN (Brighty D W et al Proc. Natl. Acad. Sci. USA 88, 7802-7805 (1991)).

The resulting plasmids were transfected into THP-I cells using a modified DEAE- Dextran procedure (Fujita et al (1986) Cell 46, 401-407). The cells were maintained in medium containing Img/ml G418 and 10% THP-1 conditioned medium, with rigorous washing procedures to remove dead cells. This was continued until cell killing stopped and robust growth was observed. We obtained 6 lines each of pCLDN (empty vector) pCLDNPPAR6, pCLDNPPAR5AS, pCLDNPPARa and pCLDNPPARtAS.

"AS"

means antisense construct. All of these cell lines were essentially identical in growth and viability. Initial differentiation experiments were performed with the PPAR5 cell lines in the selection medium. These were negative for all constructs including the empty vector control line. The cells for all constructs were still alive after PMA treatment apart from th'e PPAR5 anti-sense lines which all showed trypan blue uptake. The cells were then cultured without G418 until the empty vector control lines responded to PMA in a similar fashion to the parental control. This then revealed that the pCLDNPPAR6 lines all differentiated in a similar fashion but the pCLDNPPAR5AS lines all failed to differentiate.

RNA and protein was prepared from the PPARS sense cell lines and analysed for PPARS mRNA by RNase protection and for PPAR6 protein by western blotting All 6 lines expressed >10 fold increases in PPARS mRNA over the parental cell line. These levels are far in excess of those observed in PMA treated cells. High levels of protein have been seen in lines designated delta-I and delta-2. The other 4 lines have not 00 O been analysed by western blotting. All subsequent experiments were performed on these lines.

SFigure 6 shows that PPAR8 over-expression promotes foam cell formation.

A. Parental THP-I cells and pCLDNPPAR8 cells were treated with 5ng/ml PMA and 5' DMSO or BRL49653 Treatment was continued for 3 days and the cells fixed in 0.66M paraformaldehyde, stained with a saturating solution of Oil Red 0 and then counterstained with haematoxylin. Subsequent experiments have shown BRL49653 00 action to be effective at submicromolar concentrations.

SB. Cultures were treated as above and then extracted with methanol/chloroform/PBS C D10 (1:1:1 vol/vol). The organic phase was run on a silica gel TLC plate (Merck:Kieselgel with concentration zone) with heptane diethyl ether and acetic acid as 00 the solvent. The lipids were then stained with an aerosol of phosphomolybdic acid in methanol. Shown is the relative mobility of free cholesterol (FCHOL), free arachidonic (N acid (FFA), highly unsaturated triacylglycerol fatty acid methyl esters (FAME), cholesterol esters (CE) and also butylated hydroxyanisole (BHT) that is present in the solvent system.

Figure 7 shows that fatty acid efflux is repressed in activated PPAR6 overexpressing cells.

A. Fatty acid uptake.

1 million cells in 2ml of medium were incubated with 5 .Ci of 3 H-oleic acid overnight with or without 100pM linoleic acid (HIGH FAT and LOW FAT respectively). The cells were then pelleted, washed and resuspended in fresh medium without labelled fatty acids.

The percentage incorporation was determined by scintillation counting of an aliquot of the medium and the washed cells. All assays were performed in triplicate.

B. Fatty acid efflux.

The washed cells were incubated for a further 50 hours and the release of radioactivity was monitored over time. Parental cells in high fat are shown as diamonds and in low fat are shown as squares. PPAR8 over-expressing cells in high fat are shown as triangles and in low fat as circles.

C. Fatty acid efflux of PMA activated cells.

Cells were treated with PMA and incubated with radiolabelled oleic acid as described above. The adherent cells were washed and the release of radioactivity from these cells was measured over time. The parental cell line (squares) displays higher levels of radioactivity release than the PPARS over-expressing cells (diamonds).

Figure 8 shows that ApoE gene expression is regulated by fatty acids through Total RNA was prepared from parental THP- cells treated with PMA (THP-1), or PMA and linoleic acid (THP-I+FA), and untreated PPARS over-expressing cell line (DELTA). cDNA was prepared from these RNA samples and the cDNA was analysed for ApoE sequences using TAQMAN procedures. The result shown is relative expression normalised for P-actin expression and the error bars represent the standard deviation in duplicate samples.

00 Figure 9 shows that inhibition of PPAR8 prevents foam cell formation. Cells were treated overnight with 5ng/ml PMA and scored for differentiation (adherence to Sculture dish) and viability (trypan blue exclusion). The parental THP-1 cells and PPAR8 over-expressing cells (Sense) differentiate well in the presence of PMA. However, the PPARS antisense expressing cells (Anti-sense) do not differentiate at all and become highly permeant to trypan blue. These PPARS anti-sense cells grow normally with high viability in the absence of PMA.

00 Figure 10 shows that PPAR8 protection from death is not downstream of PKC.

Parental and PPAR5 anti-sense cells were incubated with PMA and an inhibitor of PKC ,I 10 activity (Bis) and two inhibitors of PLA2 activity (OBAA and mepacrine). These Sinhibitors were included at concentrations used in previous studies for specific inhibition.

0 Bis is bisindoylmaleamide I and is available from Sigma. OBAA is 3-(4- Soctadecyl)benzoylacrylic acid and is available from Calbiochem. Mepacrine is 6-chloro- CN 9 4 -diethylamino)-1-methyl butyl]amino-2-methoxy-acridine and is available from Calbiochem.

All inhibitors prevented the differentiation of parental THP-1 cells This confirmed the role of PKC in the action of phorbol ester. The action of the PLA2 inhibitors appears to reveal new aspects of the macrophage differentiation. However, when we examined the viability of these cells by trypan blue exclusion we found that they did not block the PMA-induced "death" of the PPAR5 anti-sense cell line (black bars). Only mepacrine appeared to have any sign of toxicity in the parental cells (white bars).

Figure 11 shows that lipid accumulation is promoted by an agonist for Compound F.

Figure 12 shows that Compound F, a PPAR6 agonist, promotes macrophage foam cell formation from THP-1 glial cells.

Figure 13 shows that Compound F promotes macrophage foam cell formation from primary human monocytes.

Figure 14 shows lipid accumulation in glial cells promoted by Figure 15: shows that Compound F stimulates proliferation of prostate cancer cell lines.

Description: The rle of PPAR6 in the formation of foam cells.

Tissue culture Human glioblastoma astrocytoma U373 cells were grown in RPMI 1640 culture medium supplemented with 10% v/v heat-inactivated foetal bovine serum (GibcoBRL, Paisley, Scotland), penicillin (5000IU/ml) (GibcoBRL, Paisley, Scotland) and streptomycin (5000g/ml) (Gibco, Paisley, Scotland). The cultures were grown at 37°C and 5% CO 2 and passaged when 100% confuency was achieved.

Drug treatment of the cell lines Confluent cells were plated in six-well test plates in 2ml of the medium used for the tissue culture detailed above and created with 5tM and 104M of the PPAR-specific 00 agonist Compound F. DMSO was used as a control. The Compound and medium were renewed every three days and the cells treated for one week.

t Staining experiments \O 5 Oil Red O staining with haematoxylin counterstaining experiments were performed on cells from each of the treatments described in the paragraph above. The medium was discarded and the wells washed with PBS (2ml). The cells were fixed in 00 10% formalin (Iml) for one hour and then washed twice in PBS before brief rinsing in 60% iso-propyl alcohol. Oil Red O solution (1 ml) (Sigma) was added and removed after C 10 three hours. The wells were then washed twice with PBS. For the counterstaining, haematoxylin counterstain (1:10, ImL) (Sigma) was added and removed after five 00 minutes by washing twice with PBS. The second wash was left in the wells.

C1 Results After one week, the control cells showed no lipid accumulation. For the cells treated with Compound F, lipid accumulation was observed and was notably macrovesicular i.e. lipid accumulation was present not only in the perinuclear area but also in the astrocytic processes (see Figure 14).

Example 1: The role of PPAR5 in the formation of atherosclerotic foam cells.

Activated macrophages express all three forms of peroxisome proliferator activated receptor, namely alpha gamma and delta In the work described in Example 1 we demonstrate that expression of PPAR8 is required for macrophage activation by phorbol esters and that PPARS promotes macrophage foam cell formation.

It has previously been shown that PPARy agonists negatively regulate macrophage activation and have profound anti-inflammatory actions. In this Example we show that the PPARy agonist, rosiglitazone, inhibits macrophage foam cell formation. Therefore, PPARy and PPAR5 mediate opposing roles in macrophage lipid metabolism and differentiation. These results indicate that, surprisingly, antagonistic ligands for are strong candidates as drugs for the prevention of cardiovascular disease.

Experimental materials and methods are described in the Figure legends.

Results Validation of foam cell model Monocytic cell lines are widely used in basic research into the molecular basis of atherogenesis. We have investigated the influence of lipids and dietary fat, and the influence of stress and inflammation. The most versatile cell line for this research is the human cell line THP-I. This cell line grows in suspension under normal conditions, however inflammatory stimuli such as phorbol esters provoke a powerful differentiation and inflammatory response where the cells become adherent and more "macrophage like". This cell line is also known to respond to fatty acids and oxidised LDL by changes 00 in gene expression, and oxidised LDL has been shown to promote cytoplasmic lipid accumulation. These regulatory phenomenon are viewed as representing the initial events Sthat occur in atherosclerotic plaque formation (12).

We have now found an important link between the inflammatory process and the lipid .O 5 pathology of these cells with the observation that phorbol ester stimulation of THP-I cells leads to a large increase in the levels of PPAR5 mRNA. Other groups have shown that inflammatory stimuli upregulate the expression of PPARy in mouse and human 00 macrophages, as well as monocyte derived cell lines such as THP-1 and U937 (13-15).

has also been shown to be expressed in thioglycolate-elicited peritoneal 1 jto macrophages from mice We have also demonstrated that activated THP-I cells 1 express many inflammatory gene products associated with atherogenesis such as MCP 00 (monocyte chemoattractant protein), IL-8, II-lP and thromboxane synthase (Figure 2), Sand have found that the expression of several of these gene products upon activation is (I modulated by fatty acids. The finding that the expression of apolipoprotein E increases upon activation and that this is severely repressed by fatty acids is significant. These results demonstrate that this system responds to fatty acids and inflammatory stimuli in a suitable manner for it to be considered a good model for human vascular disease. We also observed that treatment of adherent THP-1 cells with polyunsaturated fatty acids, such as linoleic acid, leads to the accumulation of lipid droplets in the cytoplasm (Figure 3A). These lipid laden macrophages are known as foam cells. The involvement of a PPAR/RXR heterodimer in the regulation of foam cell formation was suggested by the observation that an activating ligand for the retinoid X receptor (LG 100268) promoted foam cell formation in co-operation with fatty acids. Linoleic acid is not a very specific ligand for PPAR's, however it has been shown to activate PPAR alpha and delta efficiently, whereas it is a rather poor activator of PPARy. Treatment of these cells with the PPARa activator Wy 14,643 had no effect, consistent with the low expression of this isoform in the activated macrophage (Figure The use of rosiglitazone, BRL49653, also did not produce foam cells; however, it is known that these cells contain PPARy. In fact BRL49653 treatment results in a reduction of lipid deposits when compared to the untreated cells (Figure 3A) and can inhibit the linoleic acid and rexinoid promotion of foam cells (data not shown). These data collectively suggest for the first time that is the molecular target for fatty acids in the promotion of foam cell formation and that PPARy is a negative regulator of foam cell function.

Rosiglitazone (BRL49653) opposes foam cell formation.

Our data support the role of PPARy in the antagonism of macrophage activation and lipid accumulation. We have also observed that cell adherence of THP-1 cells upon treatment with BRL49653 is slower than observed for the untreated cells (data not shown). This inhibitory role was also suggested by two papers in Nature in which the negative regulation of inflammatory mediators by PPARy was demonstrated (13,14). We confirmed the anti-inflammatory action of TZD's by examining the effect of BRL49653 on IL-l1 expression. Indeed BRL49653 treatment leads to a drop in IL-l1 mRNA levels (Figure 4A). The reduction of TNFa mRNA, when compared to actin. was also observed, however this reduction was not so dramatic (Figure 4B). The uptake of lipid 00 0O 0 by the scavenger receptor CD36 has been shown to be regulated by PPARy in THP-1 cells (16,17) and we find that CD36 is regulated by TZD in the activated THP-1 cell (Fig 3C), however these cells do not form foam cells (Fig Therefore CD36 upregulation is not sufficient for foam cell formation and the overall effect of PPARy activation is to antagonize foam cell formation. TZD's are the thiazolidinedione class of drugs which includes BRL 49653.

Genetic modulation of foam cell model.

00 In order to ascertain whether or not PPARS was involved in the fatty acid induced foam cell formation, cell lines were generated from THP-1 cells that over-expressed PPAR5 or S 10 that expressed PPAR5 anti-sense mRNA. The cDNA encoding PPAR5 was cloned into a O vector (pCLDN) that directs transcription under the control of a powerful enhancer from 00 the human cytomegalovirus (Fig 5A). This vector also contains the neomycin resistance Sgene for the selection of targeted cells. The cDNA was inserted in both orientations in N order to express the sense DNA for PPAR5 protein expression (pCLDNPPAR5-S) and in the anti-sense direction to block PPAR5 expression (pCLDNPPAR5-AS). The THP-1 cells were transfected with pCLDNPPAR-S or pCLDNPPARS-AS and selected with Img/ml G418 until robust growth in G418 was observed. The cells were then released from G418 selection as even the vector alone-controls would not differentiate in the presence of G418. G418 is known to be an inhibitor of protein kinase C activity and therefore is an antagonist of phorbol ester action. After recovery from G418 selection, over-expression of PPAR5 in six independently transfected polyclonal cell lines was confirmed by RNAase protection (Fig 5B) and western blotting (Fig 5C). These cell lines grow normally and do not display any adherence to the tissue culture flasks: however, when treated with PMA, they become adherent and accumulate large amounts of intracellular lipid when compared to the wild type cells, even in the absence of added fatty acids (Fig BRL49653 treatment can prevent the PPAR6-driven foam cell formation. Fatty acid analysis demonstrated that the increases in cellular lipid are mainly in triglycerides and that this pool is eliminated by the action of BRL49653 (Fig 6B).

Using tritiated oleic acid we have analysed the uptake and efflux of fatty acids in parental and PPAR5 over-expressing cell lines. We have found that uptake and efflux are essentially identical between the two cell lines in the non-activated state (Fig 7A and B).

In the activated cells, however, it is apparent that efflux is markedly lower from the over-expressing cell lines (Fig 7C).

over-expressing cells have ApoE mRNA levels that are dramatically reduced (35 fold) compared to the parental cell line (Fig It is important to note that apoE is reduced to the same levels observed in the parental cell line after treatment with linoleic acid. This data reveals that PPAR5 mediates the fatty acid repression of the apoE gene expression. The cells expressing the PPAR5 antisense RNA (PPAR8AS) also grew normally; however, when treated with PMA these cells did not differentiate (Fig 9A).

Differentiation was not observed at any concentration of PMA (0.1 ng-25 ng/ml). Trypan blue staining of PPAR5AS cells treated with PMA ovemight revealed that the cells had died upon treatment (Fig 9B). There was no evidence for DNA condensation as judged by DAPI 4

N,

6 -diamidino-2-phenylindole, Molecular Probes. Oregon) staining (data not 00 O shown). DNA fragmentation was not seen in agarose gel electrophoresis of genomic DNA prepared from these dead cells (data not shown). Therefore the PMA treated PPARS-antisense cells do not appear to be dying by apoptosis. Using inhibitors for PKC and phospholipase A we have shown that we can block differentiation of parental THP-1 cells (Figure 10A); however, it appears that the PPAR5-antisense cells die in the presence of phorbol ester and these inhibitors (Figure 10B). This suggests that the cause of death is not downstream of PKC activation in the differentiation process.

00 We have shown that PPARS is required for the inflammatory activation of macrophages (as evidenced by the activation of THP-I cells), and that PPAR5 promotes C i 10 foam cell formation. The overexpression of PPARS profoundly alters lipid storage in these cells and this is accomplished, in part, by altering the expression of the gene 00 encoding apolipoprotein E. Inhibition (antagonism) of PPAR5 activity can prevent foam cell formation and the development of drugs that are inhibitors of PPARS activity are useful in the prevention and/or treatment of a large number of disorders that occur as a consequence of atherogenesis.

Example 2: Lipid accumulation is promoted by an agonist for PPARS.

A PPAR5 selective agonist (Compound F on page 9 of WO 97/28149) promotes lipid accumulation and promotes foam cell formation in the THP-1 assay described in Example 1. Although WO 97/28149 proposes using this PPAR5 agonist (as well as other disclosed compounds) to treat cardiovascular disease, we have now shown that this compound promotes foam cell formation.. This effect is apparent at less than 500nM and is maximal at between 5 and 10 4M (see Figure 1 IA). Compound F co-operates with the RXR ligand LG 100268 in the promotion of foam cell formation (see Figure IB). This pharmacological activity is what we would predict from the studies described in Example 1. Compound F also promotes macrophage foam cell formation both in THP-1 cells (Figure 12) and primary human monocytes(sFigure 13).

Example 3: Screening for inhibitors of PPAR8 activity.

Binding assays: Radioligand filtration assays Recombinant hPPAR8 is mixed with the radioactive ligand 3

H]

2 L-783483 as described in WO 97/28149 and in Berger et al (1999) J. Biol. Chem. 274, 6718-6725 in the presence of a test compound. L-783483 has a Kd InM. The mixture is applied to mixed cellulose filters and the fluid drawn through the filter by vacuum pressure. The radioactivity remaining on the filter will represent L-783483 bound to PPAR5. A decrease in the radioactivity bound will indicate the presence of a competing PPAR6 compound. This assay determines binding properties of the test compound.

Fluorescent fatty acid displacement.

The binding of cis or trans parinaric acid provides a fluorescent assay for PPAR ligands. "cis-Parinaric acid" is 9 ,15-cis, 11,13 trans-parinaric acid. "trans-Parinaric acid" is 9,11,13,15 trans-parinaric acid. Both are available from Molecular Probes, Oregon. Recombinant PPARS is mixed with these fatty acids acids and a test compound would produce less fluorescence than observed in the presence of fatty acid/PPAR alone 00 if significant binding of the test compound occurs. This assay determines whether the test compound binds This assay would be automated easily by carrying it out in a multi-well format with an appropriate fluorimeter, giving a high throughput.

Co-activator/receptor/ligand interaction assay (CARLA) The binding of co-activator proteins, such as RIP140 or SRC-I, to PPAR8 is dependent on the presence of a ligand. RIP140 and SRC-I are proteins that bind PPARS (Krey et al 00 (1997) Mol. Endocrinol. 11, 779-791). Co-activators are translated in vitro in the presence of S labelled methionine and mixed with purified recombinant hPPAR5 in the presence of test compounds. The hPPAR will be immunoprecipitated and the precipitate Swill be analysed by SDS/PAGE followed by autoradiography, the presence of a 00 radioactive signal corresponding to the co-receptor will indicate the presence of a PPAR6 Sligand. This assay may be used to identify co-activator binding that may prove to be N antagonists; this is achieved by having known agonists present in each assay (see above).

Functional assays.

Transient transfection reporter construct assay Cos-1 or CV-I cells are transfected with an expression construct for PPAR5 and a reporter construct with the luciferase under the control of a PPAR dependent enhancer.

PPARS-dependent enhancers include those derived from the acyl-CoA oxidase and cytochrome P4504A6 genes. This may be performed in a variety of multi-well culture formats and the transfected cells are treated with a known agonist of PPAR5 and the test compounds. Cells are lysed in situ and assayed for luciferase activity in a luminometer.

Luminometers are available that are compatible with high throughput screening. The assay described above examines the ability of the test compounds to block activity of a PPAR5 agonist.

Stable cell lines reporter construct assay.

Cell lines are transfected with constructs similar to those outlined above except that they also encode antibiotic resistance markers. This allows for the selection of cell lines that stably express PPAR5 and contain the reporter sequences integrated into the genome.

This cell line is grown and used for the detection of PPAR5 activating compounds without the need for repetitive and costly transfections.

Example 4: Foam cell assays Foam cell assays are used to identify potential anti-atherogenic compounds. THP- 1 cells in 96-well plate culture are treated with 0.1 to lOng/ml PMA in order to induce macrophage differentiation. THP-I cells are available as ECACC Accession No 88081201.

A source of fatty acid is supplied which is either serum (CPSR-3 serum replacement from Sigma) or 20-100pM linoleic acid.

Accumulation of fatty acid in the differentiating macrophage cells is measured in the presence or absence of a test compound after 3 to 7 days using Nile Red stain.

Test compounds which reduce the accumulation of fat compared to the absence of test compound are selected as potential anti-atherogenic agents or as lead compounds.

00 Example 5: Prostate cancer cell tests We have found that the PPAR5 agonist, Compound F. can stimulate prostate t epithelial growth. Both minimally transformed cells PNTIA and non-transforming prostate cancer cells (LNCaP) have growth stimulated by up to 40% by low 5 concentrations of Compound F. This effect is also seen with the RXR ligand LG100268.

Also, low concentrations of both Compound F and LG 100268 that do not significantly increase cell growth, stimulate cell growth when added together in the culture medium.

00 The highly transformed prostate cancer cell line PC3 grows the fastest out of these lines and is not stimulated by Compound F.

S 10 We have transfected PC3 cells with expression constructs for PPAR5 antisense RNA; these have all failed to grow. In contrast, cell lines expressing PPARyantisense 00 RNA have been generated, which have altered but sustainable growth. In all experiments, cell lines containing the empty expression vector have been generated and Cl have no phenotype. These experiments support the assertion that PPAR5 is proproliferative and that PPAR5 antagonists will be useful in the treatment of cancer.

Cell lines were plated at 2,500 cells per well in a 24-well plate and cultured in RPMI containing 5% dextran-coated charcoal-treated FCS. Increasing concentrations of Compound F or LG 100268 were included in the culture medium and the cultures were maintained for 7 days with changes of drugs and medium every 48 hours. The final cell number in each well was then determined by a colorimetric assay (Landegreen U. J.

Immunol. Meth. 67, 379-388, (1984)) and the relative growth expressed as a percentage of the cell number in the control wells.

00

O

O REFERENCES S 1. Issemann, I. Green, S. (1990) "Activation of a member of the steroid hormone receptor superfamily by peroxisome proliferators" Nature 347, 645-50.

0D 2. Dreyer, C. et al (1992) "Control of the peroxisomal beta-oxidation pathway by a novel family of nuclear hormone receptors" Cell 68, 879-87.

00 S 3. Palmer, C.N.A. et al (1998) "Peroxisome proliferator activated receptor-alpha i expression in human liver" Molecular Pharmacology 53, 14-22.

00 4. Lee, S.S-T. er al (1995) "Targeted disruption of the alpha isoform of the O peroxisome proliferator-activated receptor gene in mice results in abolishment of the C" pleiotropic effects of peroxisome proliferators" Mol. Cell. Biol. 15, 3012-3022.

Forman, B.M. et al (1995) "15-Deoxy-delta 12, 14-prostaglandin J2 is a ligand for the adipocyte determination factor PPAR gamma" Cell 83, 803-812.

6. Lehmann, J.M. et al (1995) "An anti-diabetic thiazolidinedione is a high affinity ligand for Peroxisome proliferator activated receptor y" J. Biol. Chem. 270, 12953-12956.

7. Barak, Y. et al (1998) "PPARy-null mice Early embryonic lethality due to a putative placental defect" Abstract No 303. Keystone Symposium on The Nuclear Receptor Gene Family. Incline Village, Nevada.

8. Schmidt, A. et al (1992) "Identification of a new member of the steroid hormone receptor superfamily that is activated by a peroxisome proliferator and fatty acids" Molecular Endocrinology 6, 1634-1641.

9. Saxena, U. et al (1992) "Lipoprotein lipase-mediated lipolysis of very low density lipoproteins increases monocyte adhesion to aortic endothelial cells" Biochemical Biophysical Research Communications 189, 1653-1658.

Frostegard, J. et al (1990) "Oxidized low density lipoprotein induces differentiation and adhesion of human monocytes and the monocytic cell line U937" Proc. Nat. Acad. Sci. USA 87, 904-908.

11. Terkeltaub, R. et al (1994) "Oxidized LDL induces monocytic cell expression of interleukin-8, a chemokine with T-lymphocyte chemotactic activity" Arterioscler.

Thromb. 14, 47-53.

12. Ross, R. (1993) "The pathogenesis of atherosclerosis; A perspective for the 1990s" Nature 362, 801.

00 13. Ricote, M. et al (1998) "The peroxisorne proliferator activated receptor-y is a ct negative regulator of macrophage activation" Nature 391, 79-82.

5 14. Jiang, C. et at (1998) "PPARy agonists inhibit production of monocyte inflammatory cytokines" Nature 391, 82-86.

00 15. Marx, N. et at (1998) "Macrophages in human atheroma contain PPARY' Am. J.

Pathol. 153, 17-23.

16. Tontonoz, P. et at (1998) "PPARy promotes monocyte/macrop-e differentiation 00 and uptake of oxidised LDL" Cell 93, 24 1-252.

17. Nagy, L. et a! (1998) "Oxidised LDL regu lates macrophage gene expression through ligand. activation of PPARY' Cell 93, 229-240.

Claims (37)

1. 2. A method of preventing or reducing foam cell development from macrophages or 00 other cells, or removing foam cells, in a patient, the method comprising administering to the patient an effective amount of an inhibitor of PPAR5 activity. (N
2. 3. A method according to Claim 2 wherein the foam cell development from 00 macrophages or other cells is associated with any one of atherosclerosis or diseases O associated with atherosclerosis, heart disease, stroke, peripheral artery diseases, angina, Cl restenosis and atheroma.
3. 4. A method of preventing or treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels in a patient, the method comprising administering to the patient an effective amount of an inhibitor of activity. A method according to Claim 4 wherein the vascular disease is any one of atherosclerosis, heart disease, stroke or peripheral artery disease.
4. 6. A method of preventing or reducing proliferation of cells, which method comprises contacting the cells with an inhibitor of PPAR8 activity.
5. 7. A method of treating or preventing cancer in a patient, the method comprising administering to the patient an effective amount of an inhibitor of PPAR5 activity.
6. 8. A method according to Claim 6 wherein the cancer is any one of skin cancer, breast cancer, colon cancer or prostate cancer.
7. 9. A method of treating or preventing Alzheimer's disease in a patient, the method comprising administering to the patient an effective amount of an inhibitor of activity. A method according to any one of the preceding claims wherein the inhibitor of activity is a compound which prevents the expression of PPARS in a cell.
8. 11. A method according to Claim 10 wherein the compound is a nucleic acid-based molecule. 00
9. 12. A method according to Claim 1 wherein the nucleic acid-based inhibitor of activity in a cell is any one of a PPAR-selective antisense molecule or a PPARS- selective ribozyme. 5 13. A method according to any one of Claims 1 to 9 wherein the compound inhibits the activity of PPAR8 protein activity. 00 14. A method according to any one of the preceding claims wherein the inhibitor of activity is a compound which blocks the effect of a PPAR8 agonist. N An inhibitor of PPAR8 activity for use in medicine. 00
10. 16. A pharmaceutical composition comprising an inhibitor of PPAR8 activity and a C N pharmaceutically-acceptable carrier.
11. 17. Use of an inhibitor of PPARS activity in the manufacture of a medicament for preventing or reducing foam cell development from macrophages, or removing foam cells, in a patient.
12. 18. Use of an inhibitor of PPAR5 activity in the manufacture of a medicament for preventing or treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels.
13. 19. Use of an inhibitor of PPAR5 activity in the manufacture of a medicament for treating or preventing cancer. Use of an inhibitor of PPAR5 activity in the manufacture of a medicament for treating or preventing Alzheimer's disease.
14. 21. A method of identifying a compound which may, or which can be used as a lead compound to produce a compound which may, be useful in medicine the method comprising selecting a compound which inhibits PPAR5 activity.
15. 22. A method of identifying a compound which may, or which can be used as a lead compound to produce a compound which may, prevent or reduce foam cell development from macrophages or other cells, or remove foam cells; or prevent or be useful in treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels; or prevent or be useful in treating cancer; or prevent or be useful in treating Alzheimer's disease, the method comprising selecting a compound which inhibits PPAR5 activity.
16. 23. A method according to Claim 22 wherein the compound identified is subsequently tested in a further screen to determine whether it may prevent or reduce foam cell 00 development from macrophages or other cells, or remove foam cells; or prevent or is useful in treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels; or prevent or is useful in treating cancer; or prevent or is useful in treating Alzheimer's disease.
17. 24. A method according to Claim 22 wherein the compound identified as a lead compound is modified. 00 t,
18. 25. A method of identifying a compound which inhibits PPAR5 activity the method comprising selecting from a library of test compounds any compound which inhibits PPAR6 activity. 00
19. 26. A method according to any one of Claims 22 to 24 wherein the compound is selected by its ability to inhibit PPAR protein function or activity.
20. 27. A method according to any one of Claims 22 to 25 wherein the compound is selected by its ability to inhibit the production of PPAR5 in a cell.
21. 28. A method of identifying a compound which may, or which can be used as a lead compound to produce a compound which may, prevent or reduce foam cell development from macrophages or other cells, or remove foam cells or prevent or be useful in treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels, the method comprising the steps of selecting: a suitable primary cell population or cell line, supplying to the cell line an inflammatory stimulus or growth factor which facilitates differentiation to a foam cell precursor, supplying to the foam cell precursor a suitable concentration of fatty acid, and measuring the accumulation of fatty acid in the cell in the presence or absence of the compound.
22. 29. A method according to Claim 28 wherein the primary cell population consists of peripheral monocytes and macrophages and the cell line is a leukocyte cell line. A method according to Claim 29 wherein the leukocyte cell line is a monocytic or macrophage-like cell line.
23. 31. A method according to Claim 30 wherein the cells are THP-1 or U937 cells.
24. 32. A method according to any one of Claims 28 to 31 wherein the growth factor is a
25. 33. A method according Claim 32 wherein he phorbol ester or GMCSF 33. A method according to Claim 32 wherein the phorbol ester is PMA. 00 O
26. 34. A method according to any one of Claims 28 to 33 wherein the fatty acid is supplied in serum or as linoleic acid. A method according to any one of Claims 27 to 34 wherein the fatty acid accumulation is measured by fatty acid staining.
27. 36. A compound identifiable by the methods of any one of Claims 21 to 00
28. 37. A compound according to Claim 36 for use in medicine.
29. 38. A pharmaceutical composition comprising a compound according to Claim 36 and 00 a pharmaceutically acceptable carrier.
30. 39. A method of treatment according to any one of Claims 1 to 12 wherein the inhibitor of PPAR5 activity is identifiable by the method of any one of Claims 21 to 26. A method of preventing or reducing foam cell development from macrophages or other cells, or removing foam cells, or preventing or treating a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels, the method comprising administering to the patient an effective amount of a compound identifiable by the method of any one of Claims 27 to 33.
31. 41. Use according to any one of Claims 16 to 19 wherein the inhibitor of activity is identifiable by the method of any one of Claims 21 to 26.
32. 42. Use of a compound identifiable by the method of any one of Claims 28 to 35 in the manufacture of a medicament for preventing or reducing foam cell development from macrophages or other cells, or removing foam cells, or treating or preventing a vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels.
33. 43. Any novel method of treating or preventing vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels as herein disclosed.
34. 44. Any novel method of identifying a compound useful in preventing or treating vascular disease associated with plaque formation and/or thrombotic blockage of the blood vessels as herein disclosed. A method of preventing or treating inflammatory disorders which method comprises administering to the patient an effective amount of an inhibitor of activity. 00 O S46. A method according to claim I wherein the macrophages or other cells are those involved in atherosclerotic pathology.
35. 47. A method according to claim 2 wherein the macrophages or other cells are those involved in atherosclerotic pathology.
36. 48. Use according to claim 17 wherein the macrophages are those involved in 00 atherosclerotic pathology.
37. 49. A method according to claim 22 wherein the macrophages or other cells are those involved in atherosclerotic pathology. 00 0'