AU2006264635B2 - Core 2 GlcNAc-T inhibitors - Google Patents

Core 2 GlcNAc-T inhibitors

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AU2006264635B2
AU2006264635B2 AU2006264635A AU2006264635A AU2006264635B2 AU 2006264635 B2 AU2006264635 B2 AU 2006264635B2 AU 2006264635 A AU2006264635 A AU 2006264635A AU 2006264635 A AU2006264635 A AU 2006264635A AU 2006264635 B2 AU2006264635 B2 AU 2006264635B2
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sac
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glucose
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Rakesh Chibber
Russell Hagan
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MS Therapeutics Ltd
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MS Therapeutics Ltd
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Description

CORE 2 GLCNAC-T INHIBITORS
The present invention relates to the use of known and novel compounds as pharmaceutical actives against diseases susceptible to treatment by modulation, eg. inhibition, of the enzyme Core 2 GIcNAc- transferase (EC 2.4.1.102), also known as UDP-
GlcNAc:Galβl,3GalNAc-R (GIcNAc to GaINAc) β-l,6-N-acetylglucosaminyl transferase
(core 2 β-1,6 N-acetylaminotransferase, hereinafter referred to as Core 2 GIcNAc-T.
Inhibitors of Core 2 GIcNAc-T, and the present compounds in particular, have application in therapy for diseases in which core 2 GIcNAc-T is implicated and especially those in which the enzyme activity is raised relative to the normal level in the tissue type concerned, or those conditions in which it is advantageous to lower the activity of core 2 GIcNAc-T for example to its normal level or below. Examples of such conditions are inflammatory diseases such as atherosclerosis and multiple sclerosis, diabetes, cancer and its metastasis. Inhibitors of Core 2 GIcNAc-T are known but none are in clinical development as isolated actives for pharmaceutical use. Examples of known compounds are disclosed in WO0187548, Kuhns W. et al. Glycoconjugate Journal 10 381-394, Hindsgaul O. J Biol Chem. 266 (27): 17858-62 (1991) and Toki D. et al Biochem Biophys Res Commun. 198(2):417-23 (1994). Applicant's co-pending application WO050609775 (incorporated herein by reference) discloses known and novel steroidal glycosides that have therapeutic use as Core GIcNAc-T inhibitors, discusses the basis for use of such inhibitors in therapy and discloses published documents detailing the basis for Core 2 GIcNAc-T involvement in a number of diseases. Compounds of the formula I are not disclosed therein. The present application discloses further steroidal glycoside compounds that are inhibitors of core 2 GIcNAc-T and additional conditions in which these compounds have a therapeutic use.
Some of the presently disclosed steroidal glycosides have been tested previously in a limited number of disease paradigms. For example in protection against gastric mucosal lesions in rats (JP2004-143126 and Matsuda H et alBioorg Med Chem Lett. 24; 13(6): 1101-6 (2003)), in mouse ear edema tests for anti inflammatory activity (Kim SY et al Arch Pharm Res. 22(3):313-6 (1999)), in the prevention of senility (WO9916786) and as adjuvants (Oda K et al Biol Chem. 381(l):67-74 (2000)). CN1243129 and CN1237583 disclose the use of certain compounds presently disclosed in cancer and some compounds have been used in in vitro cytotoxicity assays (e.g. Hernandez, J. C. Bioorganic & Medicinal Chemistry 12(16), 4423-4429 (2004), Mimaki Y.et al Natural Product Letters, 14(5), 357-364 (2000)., Hu K. Planta Medica, 63(2), 161-165 (1997), Dong M. et al Planta Med. 67(9):853-7 (2001), Nakamura O. et al Phytochemistry. 36(2):463-7 (1994), Hu K. et al Planta Med. 62(6):573- 5 (1996), Hu K and Yao X. Anticancer Drugs.12(6):541-7 (2001), Hu K and Yao X. PhytotherRes. 17(6): 620-6 (2003)), however the levels of activity in cell based assays are far below those currently disclosed for inhibition of Core 2 GIcNAc-T activity. None of the aforementioned publications discloses that certain steroidal glycosides are inhibitors of Core 2 GIcNAc-T.
Certain plant sterol compounds, used as dietary supplements, impede the uptake of cholesterol from the gut and consequently lower plasma LDL cholesterol. However these compounds are generally used in doses of several grams per day and are not known to be inhibitors of Core 2 GIcNAc-T.
In a first aspect the present invention is provided a method of treating a subject in need of therapy for a condition involving detrimental activity of the enzyme core 2 GIcNAc-T, particularly raised activity, comprising administration of a therapeutically effective amount of an inhibitor of core 2 GIcNAc-T of formula I to a patient in need thereof
wherein:
R1 is H, Ci-6 alkyl, Ci-6 hydroxyalkyl, Ci-6 alkoxy or Ci-6-alkoxy-C1-6-alkyl; R2 is H, -OH or C1-6 alkoxy; Sac1 and Sac2 are independently selected saccharide moieties; and Z is a steroid moiety attached to the oxygen shown by its 3 position ring carbon; or a pharmaceutically acceptable salt, ether, ester or tautomer thereof. The ring of formula I is designated ring A.
The prior art associates Core 2 GIcNAc-T (particularly through its involvement with branched oligosaccharide synthesis) with a number of conditions, accordingly the present inventors have determined that Core 2 GIcNAc-T modulation, particularly inhibition, may be used to treat inter alia, vascular diseases, (including complications of diabetes), autoimmune and inflammatory conditions. Particular conditions subject to treatment by the present invention are myopathy, retinopathy, nephropathy, atherosclerosis, asthma, rheumatoid arthritis, inflammatory bowel disease, transplant rejection, ischemia reperfusion injury (eg stroke, myocardial ischemia, intestinal reperfusion eg after hemorrhagic shock,), restenosis, ileitis, Crohn's disease, thrombosis, cholitis including for example ulcerative cholitis), lupus, frost bite injury, acute leukocyte mediated lung injury (eg adult respiratory distress syndrome), traumatic shock, septic shock, nephritis, psoriasis, cholicytitis, cirrhosis, diverticulitis, fulminant hepatitis, gastritis, gastric and duodenal ulcers, hepatorenal syndrome, irritable bowel syndrome, jaundice, pancreatitis, ulcerative cholitis, human granulocyte ehlichiosis, Wiskott-Aldrich syndrome T-cell activation, AIDS, infection with viruses, bacteria, protozoa and parasites adapted to use particular core 2 derived glycans and cancer. Cancer metastasis is a particularly treatable by the present method. Cancers include leukemias, lymphomas, melanomas, adenomas, sarcomas, and carcinomas of solid tissues; particularly cancers include prostate, testicular, mammary, pancreatic, cervical, uterine, kidney, lung, rectum, breast, gastric, thyroid, neck, cervix, bowel, salivary gland, bile duct, pelvis, mediastinum, urethra, bronchogenic, bladder, esophagus, colon, small intestine and sarcomas (eg. Kaposi's sarcoma) and adenomatous polyps. Particularly susceptible cancers for treatment are oral cavity carcinomas, pulmonary cancers such as pulmonary adenocarcinoma, colorectal cancer, bladder carcinoma, liver tumours, stomach tumours colon tumours, prostate cancer, testicular tumour, mammary cancer, lung tumours oral cavity carcinomas. Particular application is found in cancer or its metastasis where Core 2 GIcNAc- T activity is raised.
Compounds of the formula I are those in which: preferably R1 is H, Ci-6 alkyl or Ci_β hydroxyalkyl; more preferably R1 is -H, -CH3 or -CH2OH; more preferably still R1 is - CH2OH; more preferably still R1 is -CH2OH and ring A is a glucose or galactose moiety; most preferably glucose; Preferably R2 is H or -OH; or a pharmaceutically acceptable salt, ether, ester or tautomer thereof.
Saccharides Sac1 and Sac2 include, but are not limited to, monosaccharides, disaccharides, trisaccharides, tetrasaccharides and polysaccharides. Preferably Sac1 and Sac2 are monosaccharides, but may be independently selected as di- or oligosaccharides. Preferably Sac1 and Sac2 are independently selected from a tetrose a pentose and a hexose; Preferably Sac1 is selected from a pentose, a deoxy aldohexose and an aldohexose; more preferably Sac1 is selected from arabinose, xylose, quinovose rhamnose or an aldohexose, more preferably Sac1 is selected from the group consisting of arabinose, xylose, quinovose, rhamnose, glucose, mannose, gulose, altrose, allose idose and talose, more preferably still Sac1 is rhamnose or glucose; most preferably it is glucose. Preferably S2 is selected from a pentose, a deoxy-aldohexose and an aldohexose; more preferably S2 is selected from arabinose, xylose, glucose, mannose, galactose, and a deoxyaldohexose; more preferably S2 is selected from the group consisting of arabinose, xylose, glucose, mannose, galactose, and a 6-deoxyaldohexose; more preferably S2 is selected from, glucose, galactose, arabinose, xylose and rhamnose; more preferably it is rhamnose. In a preferred combination the group A is glucose or galactose, Sac1 arabinose, xylose, quinovose, rhamnose, glucose, mannose, galactose, altrose, allose idose and talose, more preferably is glucose or rhamnose and S2 is rhamnose Particularly preferred are compounds of the formula HI
Wherein the ring A is a glucose moiety, and which formula may be written:
G Ic -3G Ic CK
Rha most preferred are compounds which are 6-deoxy-α-L- mannopyranosyl (l->2)-0-
[β-D-glucopyranosyl-(l→θ)]~β-D-glucopyranosides of steroid moiety Z.
Wherein GIc is glucose and Rha is rhamnose and 2 and 3 refer to the position of attachment to the central GIc group.
The term "steroid moiety" denotes a moiety comprising a tetracyclic ring system shown as formula V:
Typically the saccharide ring, A, is attached to the steroid moiety Z at the 3 position. Typically the steroid moiety ring system is modified, for example by the addition of one or more further rings and/or one or more double bonds and/or one or more substituents. The steroid moiety may for example have the ring system of cholestane, pregnane, androstane, estrane, cholesterol, cholane, progestin, a mineralocorticoid, such as dehydroepiandrosterone or its 7-keto or 7-hydroxy analogue or a bile acid.
In one preferred embodiment the steroid moiety is that of a steroid that is in itself beneficial or neutral. By neutral is meant that the steroid ring is that which is considered suitable, whether as approved eg. by the FDA or as GRAS, for use in a human or animal. By beneficial is meant that the steroid has effects of benefit to the human or animal if it were administered separately.
The steroid moiety Z may for example be that of a steroidal sapogenin derivable from a natural source (for example a plant source) or a steroidal moiety which is itself derivable from such plant steroidal sapogenins by chemical modification. The sapogenin may for example be that of a furostanol glycoside, a spirostanol glycoside (including those with nitrogen and oxygen containing rings) a damarane glycoside or other steroidal saponin. The steroid moiety Z for example may be a steroid moiety of the formula VI
Groups or rings that may be incorporated into the steroid core V or VI are selected from those set out in formulae VI a to VI e wherein the dotted lines represent the relevant rings of the steroid core.
' VI e wherein:
R3, R10, R18 and R20 are independently selected from H and -OH;
R4 R14, R19, R23 R25 and R29 are independently selected from Cj-6 alkyl; preferably R4 R14, R19, R23, R25 and R2Ve-CH3;
R5, R7 and R12 are independently selected from H and C1-6 alkyl; preferably R5, R7 and R12 are independently selected from H and -CH3;
R6 is H or -OH or the H normally also present is absent and R6 is =0;
R8 is H, -OH or Cj-6 acyl or a group selected from VII a or VII b; preferably R8 is H, -OH or acetyl or a group selected from VII a or VII b;
Vil a VIIb
R9 is H.
R11 is H, Ci-6 alkyl or -OH or R9 and R11 taken together form a -CH2-CH2- group; preferably R11 is H, -OH or -CH3 or R9 and R11 taken together form a -CH2-CH2- group; R13 is H, C1-6 alkyl or Ci-6 hydroxyalkyl; preferably R13 is H, -CH2OH, or -CH3.
R15 is H or -OH.
R16 is H, -OH or Ci-6 alkoxy or R15 and R16 taken together represent the second bond of a double bond joining adjacent carbon atoms; preferably R16 is H, -OH or -OCH3 or R15 and R16 taken together represent the second bond of a double bond joining adjacent carbon atoms.
R > 17 is CJ-6 alkyl, C2-6 alkenyl, C2-6 alkynyl or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of —OH, Ci-6 alkoxy and S3; preferably R17 is C2-6 alkenyl, or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of -OH, Ci-6 alkoxy and S3; more preferably R17 is C2-6 alkenyl or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of -OH, -OCH3 and S3; more preferably still R17 is selected from the group comprising 3-methyl but-2-eneyl, 2-methyl-prop-2-enyl, 3-methylbutanyl substituted at the 4-position by S3, l-hydroxy-3- methylbutanyl substituted at the 4-position by S3 or l-methoxy-3-methylbutanyl substituted at the 4-position by S3; R21 is Ci-6 alkyl, Ci-6 hydroxyalkyl or =CH2; preferably R21 is -CH3, -CH2OH or
=CH2;
R22 is -OH;
R24 is Ci-6 alkyl, C2-6 alkenyl or C2-6 alkynyl; preferably R24 is C2-6 alkenyl; most preferably it is 2-methylproρ-2-enyl R26 is Ci-6 hydroxyalkyl;
R27 is Ci-6 alkyl, Ci-6 hydroxyalkyl or Ci-6 alkyl substituted by S4; preferably R27 is Ci-6 alkyl or Ci-6 alkyl substituted by S4; more preferably R27 is -CH3 or -CH2-S4.
R28 is Ci-8 alkyl, C2-8 alkenyl or C2-8 alkynyl; preferably R28 is Ci-8 alkyl or C2-8 alkenyl; more preferably 3-ethyl-4-methyl-pentanyl or 5-methyl-hex-4-enyl; R30 is Ci-6 hydroxyalkyl or Ci-6 alkyl substituted by S5; preferably R30 is Ci-6 alkyl substituted by S5; more preferably R30 is -CH2-S5;
R31 is Ci-6 alkyl; preferably R31 is -CH3; and Sac3, Sac4and Sac5 are independently selected saccharides; preferably Sac3, Sac4 and
Sac5 are independently selected monosaccharides; more preferably they are independently selected a hexose, a pentose or a tetrose; more preferably still they are independently selected from glucose, galactose, quinovose, fucose, arabinose and xylose, most preferably they are glucose.
Represents a bond that is either double or single; and X is either O or NH; preferably X is O. Preferred steroid moieties Z that do not incorporate further groups VI(a) to VI(e) are those in which R5 is Ci-6 alkyl; R7 is H; and R8 is VTI(a); preferably R5 is C1-6 alkyl; R7 is H; R8 is VΙI(a); R11 is C1-6 alkyl and R6 is H or -OH; more preferably R5 is C1-6 alkyl; R7 is H; R8 is Vπ(a); R11 is C1-6 alkyl; R6 is H or -OH, R12 is Cj-6 alkyl and R13 is C1-6 alkyl or C1-6 hydroxyalkyl.
Further preferred steroid moieties Z that do not incorporate further groups VI(a) to
VI(e) are those in which R5 is Ci-6 alkyl; R7 is H; and R8 is VII(b); preferably R5 is Ci-6 alkyl; R7 is H; R8 is VII(b) and R12, R13 and Ru are Ci-6 alkyl; more preferably R5 is Ci-6 alkyl; R7 is
H; R8 is VH(b) and R12, R13 and R11 are C1-6 alkyl and R6 is H.
Further preferred steroid moieties Z that do not incorporate further groups VI(a) to
VI(e) are those in which R5 is H; R7 is C1-6 alkyl; and R8 is C1-6 acyl; preferably R5 is H; R7 is
Ci-6 alkyl; R8 is C1-6 acyl; R12 and R13 are H; R11 is H or -OH. Further preferred steroid moieties Z that do not incorporate further groups VI(a) to
VI(e) are those in which R5 is H; R7 is C1-6 alkyl; and R8 is VII b; preferably R5 is H; R7 is
C1-6 alkyl; R8 is VDb; R12 and R13 are H; and R11 is H or -OH;
Preferred steroid moieties Z incorporating further groups VI(a) are those in which R5 is H, R7 is C1-6 alkyl; R8 is H or -OH; R12 and R13 are H and R17 is C2-6 alkenyl or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of -OH, -OCH3 and S3; preferably R5 is H and R7 is Cj-6 alkyl; R8 is H or -OH; R12 and R13 are H and R17 is selected from the group comprising 3-methyl but-2-eneyl, 2-methyl-prop-2-enyl, 3- methylbutanyl substituted at the 4-position by S3, l-hydroxy-3-methylbutanyl substituted at the 4-position by S3 or l-methoxy-3-methylbutanyl substituted at the 4-position by S3. Further preferred steroid moieties Z incorporating further groups VI(a) are those in which R5 is C1-6 alkyl, and R7 is H and R17 is C2-6 alkenyl; preferably R5 is C,-6 alkyl, R7 is H,
R17 is C2-6 alkenyl, R12 and R13 are C1-6 alkyl; more preferably R5 is C1-6 alkyl, and R7 is H,
R17 is C2-6 alkenyl, R12 and R13 are C1-6 alkyl; more preferably R5 is Ci-6 alkyl, and R7 is H,
R17 is C2-6 alkenyl, R12 and R13 are Ci-6 alkyl; and R15 is -OH. Preferred steroid moieties Z incorporating further groups VI(c) are those in which R5 is H, R7 is C1-6 alkyl, R8 is H or -OH, R11 is H or -OH; R12 and R13 are H. Preferred steroid moieties of formula VI (a) and VI (b) are those having the ring structures illustrated in figure 1: still more preferably having the substitutions as set forth therein.
In each case the carbon atom labelled "25" can be in either the R or S configuration. Preferred steroid moieties, Z, of the formula VI c in which X = O are for example those having the radicals of sarsasapogeniα, smilagenin, 12β-hydroxysmilagenin, rhodeasapogenin, isorhodiasapogenin, samogenin, 12β-hydroxysamogenin, markogenin, yonogenin, convallagenin A, convallagenin B, tokorogenin, tigogenin, neotigogenin, gitogenin, agigenin digitogenin, chlorogenin, paniculogenin, (25R)-spirostan-3β, 17α,21- triol, allogenin, (25R)-5α-spirostan-2α,3β,5α,6α-tetraol, (24S,25R)-5α-spirostan- 2α,3β,5α,6β,24-ρentaol, yamogenin diosgenin, yuccagenin, lilagenin, ruscogenin, (25S)- ruscogenin, neopraserigenin, pennogenin, isonuatigeniα, cepagenin, 24a-hydroxypennogenin, ophiogenin, sibiricogenin, convallamarogenin, neoruscogenin, hecogenin, neohecogenin, manogenin, sisalagenin and hispigenin. Preferred steroid moieties, Z, of the formula VI c in which X = NH are for example those that have the radicals of: solasodine, soladulcidine, tomatidine and 5- dehydrotomatidine.
Preferred steroid moieties Z of the formula VI (c) are those having the ring structures illustrated in figure 4; still more preferably having the substitutions as set forth therein. Further preferred steroid moieties Z of the formula VI are those having the ring structures illustrated in figure 5; still more preferably having the substitutions as set forth therein.
Preferred steroid moieties VI i to VI xxxii can be derived from steroidal glycoside compounds herein or references of table 2 and further from Hostettman K. Saponins. Cambridge University Press UK. (1995), Ori K. et al. Phytochemistry. 31(8):2767-75 (1992), Shimomura H. et al, Phytochemistry 28, 3163-3170 (1989),
Preferred compounds of the formula I combine any of the preferred Steroid moieties -Z- with preferred saccharide moieties.
Preferred compounds of the formula I are protogracillin proto neogracillin methylprotogracillin, methylprotoneogracillin, pseudoprotogracillin, dracenoside Q dioscoreside E , dracenoside P tuberoside C icogenin gracillin , collettiside IV 17-OH gracillin dracaenoside H dracaenoside L,dracaenoside I ,lilioglycoside H, lilioglycoside I, dracaenoside D, neoalsoside A, neoalsoside C and hoduloside V, Lotoside II
Further preferred compounds that are as yet un-named are compounds 17, 21 and 25 of table 2.
The preferred compounds have the following chemical names. Protogracillin is [(3β,22α,25R)-26-(β-D-glucopyranosyloxy)-22-hydroxyfιιrost-5-en-3-yl O-6-deoxy-α-L- mannopyranosyl (l→2)-O-[β-D-glucopyranosyl-(l-»3)]-β-D-glucopyranoside], proto neogracillin is [(3β,22α,25S)-26-(β-D-glucopyranosyloxy)-22-hydroxyfurost-5-en-3-yl 0-6- deoxy-α-L- mannopyranosyl (l->2)-O-[β-D-glucopyranosyl-(l-»3)]-β-D-Glucopyranoside], methylprotogracillin is [(3β,22α,25R)-26-(β-D-glucopyranosyloxy)-22-methoxyfurost-5- en-3-yl O-6-deoxy-α-L- mannopyranosyl (l->2)-O-[β-D-glucopyranosyl-(l-»3)]-β-D- Glucopyranoside], methylprotoneogracillin is [(3β,22α,25S)-26-(β-D-glucopyranosyloxy)- 22-methoxyfurost-5-en-3-yl O-6-deoxy-α-L- mannopyranosyl (l-»2)-O-[β-D-gluco- pyranosyl-(l-»3)]-β-D-Glucopyranoside], pseudoprotogracillin is [(3β,25R)-26-(β-D- glucoρyranosyloxy)furosta-5,20(22)-dien-3-yl O-6-deoxy-α-L-mannoρyranosyl-(l->2)-O-[β- D-glucopyranosyl-(l->3)]-β-D-Glucopyranoside], dracenoside Q is [(3β)-26-(β-D-gluco- pyranosyloxy)-14-hydroxyfurosta-5,20(22)-dien-3-yl O-6-deoxy-α-L-mannopyranosyl-
(l->2)-0-[β-D-glucopyranosyl-(l-»3)]-β-D-glucopyranoside], dioscoreside E is [26-O-β-D- glucopyranosyl-3β,26- dihydroxy-23(S)-methoxyl-25(R)-fiιrosta-5,20(22)-dien-3-O-α-L- rhamnopyranosyl(l-> 2)-[β-D-glucopyranosyl(l->θ)]-β- D-glucopyranoside], dracenoside P is [(3 β)-26-(β-D-glucoρyranosyloxy)- 14,22-dihydroxyfurost-5-en-3 -yl O-6-deoxy-α-L- mannopyranosyl-(l ->2)-β-D-O-[β-D-glucoρyranosyl-(l →-3)]-glucoρyranoside, tuberoside C is [(2α,3β,5α,25S)-26-(β-D-glucopyranosyloxy)-2-hydroxyfurost-20(22)-en-3-yl 0-6- deoxy-α-L-mannopyranosyl-(l->2)-0-[β-D-glucopyranosyl-(l->-3)]-β-D-glucopyranoside], icogenin is [(3β,22α,25R)-26-hydroxy-22-methoxyfurost-5-en-3-yl O-6-deoxy-α-L-manno- pyranosyl-(l->2)-O-[β-D-glucopyranosyl-(l-»3)]-β-D-glucopyranoside], gracillin is [(3β,25R)-spirost-5-en-3-yl O-6-deoxy-α-L-mannopyranosyl-(l->2)-O-[β-D-gluco- pyranosyl-(l—>3)]-β-D-glucopyranoside, collettiside IV is [[(3β,25S)-spirost-5-en-3-yl O-6- deoxy-α-L-mannopyranosyl-(l-→-2)-O-[β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside], 17-OH gracillin is [(3β,25R)-17-hydroxyspirost-5-en-3-yl O-6-deoxy-α-L-marjnopyranosyl- (l→2)-O-[β-D-glucopyranosyl-(l→-3)]-β-D-glucopyranoside], dracaenoside H is [(3β)-14- hydroxyspirost-5-en-3-yl O-6-deoxy-α-L-mannopyranosyl-(l-->2)-O-[β-D-glucopyranosyl- (l→3)]-β-D-glucopyranoside, dracaenoside L is [(3β,24S,25R)-14,24-dihydroxyspirost-5- en-3-yl O-6-deoxy-α-L-mannopyranosyl-(l->2)-O-[β-D-glucopyraαosyl-(l→-3)]-β-D-gluco- pyranoside], dracaenoside I is [(3β)-spirosta-5,25(27)-dien-3-yl 0-6-deoxy-α-L-manno- pyranosyl-(l-^2)-0-[β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside], lilioglycoside H is [(3β,25S)-27-hydroxyspirost-5-en-3-yl O-6-deoxy-α-L-mannopyranosyl-(l-→'2)-O-[β-D- glucopyranosyl-(l→3)]-β-D-glucopyranoside], lilioglycoside I is [(3β,25R)-27-[(3S)-4- carboxy-3-hydroxy-3-methyl-l-oxobutoxy]spirost-5-en-3-yl 0-6-deoxy-α-L-manno- pyranosyl-(l→2)-O-[β-D-glucopyran.osyl-(l->3)]-β-D-glucopyranoside], dracaenoside D is [3-[(O-6-deoxy-α-L-mannoρyranosyl-(l->2)-O-[β-D-glucopyranosyl-(l->3)]-β-D-gluco- pyranosyl)oxy]-14-hydroxy-ρregna-5,16-dien-20-one, neoalsoside A is [(3β,12β,23S,24S)- 20,24-epoxy-l 2,23 ,25 -trihydroxydammaran-3 -yl O-6-deoxy-α-L-mannopyranosyl-( 1 ->2)-O- [β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside], neoalsoside C is [(3β,4α,12β,23S,24S)- 20,24-epoxy-12,23,25,28-tetrahydroxydammaran-3-yl O-6-deoxy-α-L-mannopyranosyl- (l->2)-O-[β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside3, hoduloside V is [(3β,16β,23R)-16,23:16,30-diepoxy-20- hydroxy-13-methyldammar-24-en-3-yl O-6- deoxy-α-L-mannopyranosyl-(l->2)-O-[β-D-glucopyranosyl-(l-»3)]-β-D-glucopyratioside and Lotoside II is [(3β,15α,16β,22R)-16,22-epoxy-15,16,20-trihydroxydanimar-24-en-3-yl- O-6-deoxy-α-L-mannopyranosyl-(l->2)-O-[β-D-glucopyranosyl-(l→3)]-β-D-gluco- pyranoside]. compound 17 is [(3β,24R,25R)-17,24-dihydroxyspirost-5-en-3-yl O-6-deoxy-α-L- mannopyranosyl-(l->2)-O-[β-D-glucopyranosyl-(l→-3)]-β-D-glucopyranoside], compound 21 is [(3β)~21-(β-D-glucopyranosyloxy)-20- liydroxydammar-24-en-3-yl O-6-deoxy-α-L- mannopyranosyl-(l-→-2)-O-[β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside] and compound 25 is [(3β,16β,22R)-16,22:16,30-diepoxy-20-hydroxydammar-24-en-3-yl 0-6- deoxy-α-L-mannopyranosyl-(l->2)-0-[β-D-glucopyranosyl-(l->3)]-β-D-glucopyranoside]
Where any preferred substituent (such as C^ alkyl, Ci_6 hydroxyalkyl) is said to be composed of from 1 to 6 carbon atoms (ie Ci-6) such substituents are more preferred with 1 to 4 carbon atoms (ie C1-4), are more preferred still with 1 or 2 carbon atoms (ie methyl or ethyl) and are most preferred with only one carbon atom (ie are in the methyl form). Likewise where partial substituents such as the Q-6 alkyl group or Ci-6 alkoxy group 6-alkyl are said to be composed of from 1 to 6 carbon atoms (ie Ci-6) such substituents are, independently one of the other, more preferred with 1 to 4 carbon atoms (ie Ci-4), are more preferred still with 1 or 2 carbon atoms (ie methyl or ethyl) and are most preferred with only one carbon atom (ie are in the methyl form).
Alkyl, alkenyl and alykynyl radicals may, where the number of carbons in the chain permits, be either straight-chain or branched chain. Q-6 alkyl radicals may be, for example, methyl, ethyl, n-propyl or iso-propyl, n-butyl, iso-butyl or tertiary-butyl, iso-pentyl, 2,2- dimethyl propyl, n-hexyl, iso-hexyl and 1,3-dimethylbutyl. Ci-6 alkenyl radicals may be, for example, allyl, l-methylρrop-2-enyl, 2-methylprop-2-enyl, 2-methyl prop-1-enyl, but-2-enyl, but-3-enyl, l-methyl-but-3-enyl, l-methyl-but-2-enyl, 3-methylbut-2-enyl; Ci-8 alkenyl radicals may be any of the C1-6 alkyl radicals and may also be for example 5-methyl-hex-5- enyl, 4-methyl-hex-5-enyl, 3,4-dimethyl-hex-2-enyl C^. Alkynyl may be, for example, propargyl, but-2-ynyl, but-3-ynyl, l-methylbut-3-ynyl.
A C1-^ hydroxyalkyl group may, where chemically possible, be either a Ci-6 monohydroxyalkyl or a dihydroxyalkyl group.
Where moieties may be, in turn, substituted by a saccharide moiety it is preferred that the bond is through an oxygen of the saccharide to form a group such as:
In the formula I the saccharide moieties comprise multiple chiral centres. Thus each of the carbon atoms 1, 2, 3, 4 and 5 of each saccharide can, independently, be in the R or S form. Depending on the form of the anomeric carbon, each saccharide can, independently, be in either the alpha or beta anomeric form. For Ring A the beta form is preferred. Depending on the arrangement around these chiral centres and the identity of the substituents R1 and R2 the individual monosaccharides can take a number of different forms. Thus for example, when R1 is H and R2 is -OH, the saccharide moiety may, for example, be arranged as arabinopyranose, lyxopyranose, ribopyranose or xylopyranose; preferably the saccharide is xylopyranose or arabinopyranose; more preferably the saccharide is xylopyranose.
When R1 is -CH3 and R2 is -OH the saccharide moiety A is a 6-deoxy hexopyranose, and may be arranged as 6-deoxyallose, 6-deoxyaltrose, 6-deoxygalactose (fucose), 6- deoxyglucose (quinovose), 6-deoxygulose, 6-deoxyidose, 6-deoxymannose (rhamnose) or 6- deoxytalose preferably it is fucose or quinovose; most preferably it is quinovose.
Where R1 is -CH2OH and R2 is-OH the saccharide moiety A is a hexopyranose and may be, for example, allose, altrose, galactose, glucose gulose, idose, mannose or talose; preferably it is galactose or glucose, and more preferably glucose.
Saccharides include, but are not limited to, monosaccharides, disaccharides, trisaccharides, tetrasaccharides and polysaccharides. Preferably saccharide moieties are monosaccharides, but may be independently selected as di- or oligosaccharides.
Monosaccharides include, but are not limited to, tetroses pentoses, hexoses and heptoses; tetroses pentoses and hexoses are preferred.
Tetroses may be for example aldotetroses, such as erithrose and threose and aldoketoses erithrulose.
Pentoses include, but are not limited to aldopentoses, such as arabinose, lyxose, ribose and xylose and ketopentoses such as ribulose and xylulose and deoxypentoses such as 2-deoxyribose and 3-deoxyribose. Preferred pentoses are xylose and arabinose. Pentoses may be in the furanose (eg arabinofuranose, lyxofuranose, ribofuranose and xylofuranose) or the pyranose (eg arabinopyranose, lyxopyranose, ribopyranose and xylopyranose) forms.
Hexoses include, but are not limited to aldohexoses, such as, allose, altrose, galactose, talose, gulose, idose, mannose and glucose (preferred are glucose, mannose, gulose, altrose, allose idose and talose) and lcetokexoses such as fructose, psicose, sorbose and tagatose.
Hexoses may also be deoxy hexoses wherein an -OH group becomes an -H group at any position other than the bonded group. 6-deoxyhexoses are for example 6-deoxyallose, 6- deoxyaltrose, 6-deoxygalactose (fucose), 6-deoxyglucose (quinovose), 6-deoxygulose, 6- deoxyidose, 6-deoxymannose (rhamnose) or 6-deoxytalose. Deoxyhexoses may also be 2- deoxy, 3-deoxy, 4-deoxy and 5-deoxy hexoses. The oxygen may be lacking at more than one position. Examples of deoxyhexoses are - 2-deoxy-glucose, 2-deoxygalactose, 4- deoxyfucose, 3-deoxygalactose, 2-deoxyglucose, 3-deoxyglucose, 4-deoxyglucose. Deoxy- aldohexoses are preferred. Hexoses also include hexosamines such as galactosamine, glucosamine and mannosamine, n-acteyl hexosamines such as N-acetyl-galactosamine, N-acetyl- mannosamine and N-acetylglucosamine. Preferred hexoses are aldohexoses and deoxy hexoses, particularly preferred hexoses are glucose, galactose, quinovose, fucose and rhamnose. Hexoses may be in the furanose or pyranose form; preferably in the pyranose form.
Other monosaccharides include uronic acids, for example fructuronic acid, galacturonic acid, iduronic acid, glucuronic acid, guluronic acid,, mannuronic acid and tagaturonic acid; sedoheptulose, sialic acid, neuraminic acid, muramic acid, N- acetyhieuraminic acid, N-acetylmuramic acid, O-acetyhieuraminic acid, and N- glycolylneuraminic acid.
Of hexoses, aldohexoses and deoxyhexoses (particularly deoxyaldohexoses) are preferred; of pentoses, aldopentoses and deoxy-pentoses (particularly deoxyaldopentoses) are preferred.
Pharmaceutically acceptable esters of compounds of the formula 1 are for example, an ester with an aliphatic or aromatic carboxylic or sulphonic acid. Aliphatic carboxylic acids may be for example of up to 6 carbon atoms, for example a methyl, ethyl, tert-bxxϊyl succinyl or malyl. Aromatic carboxylic acids may for example benzoic acid, sulphonic acids may be methylsulphonic or j^-toluenesulphonic acid, and include esters at any available esterifiable position. Pharmaceutically acceptable esters further include known compounds in which the sugar -OH groups are esterified with an aliphatic carboxylic acid of up to 6 carbon atoms. Also included are known esters at the carbon 26-position with compounds such as hydroxymethylgluteryric acid or its methyl ester (for example compound 19 and structure VI xxiv).
Pharmaceutically acceptable ethers are, for example, with C1^ hydroxyalkyl compounds which may be formed at any of the available -OH groups, for example on the saccharide moieties, or steroid moieties by converting one or more of the -OH groups to alkoxy groups. A suitable pharmaceutically-acceptable salt form of the compounds of the formula I is, for example, an acid addition salt with an inorganic or organic acid, for example hydrochloric, hydrobromic, trifluoroacetic or maleic acid; or an alkali metal, for example sodium, an alkaline earth metal, for example calcium, or ammonium, for example tetra(2-hydroxyethyl)ammonium, salt.
Compounds of the formula I can be extracted from a variety of plant species. Examples of sources of compounds of the invention and example purification protocols are given in the references of table 2 (which are incorporated herein by reference). Further sources of compounds of the invention and methods of isolation of such compounds are detailed in (Hostettman K. Saponins. Cambridge University Press UK. (1995) - particularly in tables 2.2, 2.9, 2.10 and 2.11 and appendix 3 which are incorporated herein by reference) and references therein.
Many compounds of the invention are hydroxylated steroids. It is known in the art that such compounds, when exposed to solvent such as alcohols during purification or preparation, may be converted to alkoxy derivatives or to other derivatives such as methylketals (which revert to the original compounds upon drying). Particularly compounds of the formula IV, in which the carbon at the at the 22-position of the furostanol structure, is substituted by -OH, may be converted to alkoxy derivatives when exposed to alcohols. Notably such compounds may become methoxy derivatives when purified from plant sources using methanol-containing solvents. Alternatively they may be converted to the corresponding alkoxy by reflux in an appropriate anhydrous alcohol at elevated temperature, for example methanol (Hu K. Planta Medica, 63(2), 161-165 (1997)). Such alkoxylated compounds are also compounds of the invention.
Where the compounds of the invention are purified from natural sources it is preferred that they are used in isolated form. By isolated is meant that the compound is at least 1% pure, conveniently it is at least 10% pure, more conveniently at least 30% pure, preferably it is at least 50% pure more preferably it is at least 80% pure still more preferably it is at least 90% pure and most preferably it is at least 95% pure.
The purity of the compound is conveniently expressed as a ratio of UV absorption associated with the compound to UV absorption associated with other material in the sample, conveniently at 205nm. The purity of the compound may be measured for example using a chromatography system such as for example TLC or HPLC such as are described in the references herein, particularly in those references relating to the compound in question, or in applicants co pending application WO050609775.
Alternatively, compounds of the invention can be synthesised via a number of routes known to the skilled worker. For example by glycosylation of appropriate aglycones. A number of suitable aglycones are available commercially, alternatively an suitable aglycone may be prepared, either by isolation from a natural source (see Hostettman ibid and references therein), by deglycosylation of a suitable glycosylated compound (for example those compounds disclosed in Hostettman ibid or herein), or by chemical synthesis from a variety of starting material that are readily available. The skilled worker will be aware of many sources of spirostanol and furostanol aglycones suitable for preparing compounds for use in the invention. For example spirostanol aglycones wherein X=O or X=NH may be, for example, sarsapogenin, smilagenin, 12β- hydroxysmilagenin, Rhodeasapogenin, Isorhodiasapogenin, Samogenin, 12β- hydroxysamogenin, Markogenin, Yonogenin, Convallagenin A, Convallagenin B, Tokorogenin, Tigogenin, Neotigogenin, Gitogenin, Agigenin Digitogenin, Chlorogenin, Paniculogenin, (25R)-Spirostan-3β, 17α21-triol, Allogenin, (25R)-5α-Spirostan- 2α,3β,5α,6α-tetraol, (24S, 25R)-5α-Spirostan-2α,3β,5α,6β,24-pentaol, Yamogenin Diosgenin, Yuccagenin, Lilagenin, Ruscogenin, (25S)-Ruscogenin, Neopraserigenin, Pennogenin, Isonuatigenin, Cepagenin, 24a-hydroxypennogenin, Ophiogenin, Sibiricogenin, Convallamarogenin, Neoruscogenin, Hecogenin, Neohecogenin, Manogenin, Sisalagenin, Solasodine, Soladulcidine, Tomatidine and 5-dehydrotomatidine.
Deglycosylation of, for example steroidal glycosides, may be simply carried out by acid hydrolysis, for example in a 50:50 mix of 2N HCl : dioxane at 1000C in a sealed tube for 4.5 hrs (Hu K. (1997) ibid). Methods for the synthesis of a number of steroidal aglycones have been known for may years. For example synthesis of diosgenin, yamogenin, kryptogenin and isonarthogenin have been reported (Kessar S. et al Tetrahedron. 24(2):905-7 (1968), Kessar S. et al Tetrahedron 24(2):899-904 (1968), Kessar S. et al Tetrahedron. 24(2):887-92 (1968))
General synthetic routes to a variety of tri saccharide substituted spirostanol saponins are known (Deng S et al.. Carbohydr i?e,s.;30;317(l-4):53-62. (1999), Li B et al. 9;331(1):1- 7. (2001), Yu B. et al. Tetrahedron letters, 42, 77-79 (2001), Yu B et al J Org Chem.; 13;67(25):9099-102 (2002)). Methods of synthesis of spirostanol saponins having 2,3 branched oligosaccharide moieties are also known (Li C et al. Carbohydr Res.; 306(1 -2): 189- 95. (1998), Zou CC. et al Carbohydr Res. 4; 338(8): 721-7 (2003), Gu G et al J Org Chem. 69(16):5497-500 (2004)). Methods of synthesis of furostanol saponins, synthesis of derivatised saponins and interconversion of spirostanol and furostanol saponins have also been devised (Yu B et al. J Comb Chem.; 3(5):404-6. (2001), Yu B et al. J Org Chem.; 13;67(25):9099-102 (2002), Cheng M.S. et al. J Org Chem.; 2;68(9):3658-62 (2003), Du Y et al. Org Lett; 2;5(20):3627-30.(2003), Li M et al Carbohydr Res. 20; 338(2): 117-21 (2003), Lahmann M et al Carbohydr Res. 337(21-23): 2153-9 (2002), Wang S.M. et al Steroids. 69(10): 599-604 (2004), Tobari A. et al Eur J Med Chem. 35(5): 511-27 (2000)). Furthermore, furostanol and spirostanol saponins can be inter converted using a β- glucosidase (Inoue K. Phytochemistry 41(3), 725-7 (1996)) and pseudosaponins maybe cyclised to form the spirostanol derivative (Tobari A. et al (2000) ibid). Combinatorial approaches to saponin synthesis have also been reported (Lautrette S. et al Chem Commun (Camb). 7;(5): 586-7 (2004), Yu B et al. J Comb Chem.; 3(5):404-6. (2001)).These references also provide information and further references on derivatisation of saccharide hydroxyalkyl groups and are incorporated herein by reference.
As used herein the term aglycone refers to steroidal glycosides wherein the saccharide moieties are not present. The compounds may have other substituents at the position occupied by the saccharide moiety. Particularly aglycones that are furostanol saponins when glycosylated may be in the ring closed state as the equivalent spirostanol compounds. Steroidal glycosides are compounds having a steroid or substituted steroid core, to which is attached one or more saccharide moieties. A steroidal sapogenin is the aglycone of a steroidal saponin. A steroidal saponin is a naturally occurring steroidal glycoside. An anti cell adhesion agent is an agent that reduces the adhesion of cells to a substrate such as platelets or the lining of blood vessels or other tissues, an anti cell-cell interaction agent is an agent that reduces the interaction between cells. An anti cellular extravasation agent is an agent that reduces the passage of cells from the blood stream through the walls of blood vessels. For the avoidance of doubt the term Ci_6 acyl is — CO-Ci.s-alkyl.
The term "treating", as used herein, includes treating as prophylaxis or treatment of a current or remitting illness.
In a second aspect of the invention is provided the use of the compounds of the formula I in the manufacture of a medicament for the treatment of conditions involving detrimental activity of the enzyme core 2 GIcNAc-T, particularly raised activity. Examples of such conditions are described herein in the first aspect of the invention.
In a third aspect of the invention there are provided pharmaceutical compositions for use in treating conditions involving detrimental activity of the enzyme core 2 GIcNAc-T, particularly raised activity, comprising the compounds of the formula I. These compositions preferably further comprise pharmaceutically acceptable carriers, diluents or excipients.
In a fourth aspect of the invention is provided the use of compounds of the invention as anti cell adhesion agents, anti extravasation agents and anti cell-cell interaction agents. Medicaments of the invention comprising compounds of the formula I will typically be prepared in a sterile and pyrogen free form. They can be administered by oral or parenteral routes, including intravenous, intramuscular, intraperitoneal, subcutaneous, transdermal, airway (aerosol), rectal, vaginal and topical (including buccal and sublingual) administration. The medicament may be made up in liquid form in which case it will typically, in addition to the compound of the formula I, comprise a pharmaceutically acceptable diluent or it may be made up in solid form.
For oral administration, the compounds of the invention will generally be provided in the form of tablets or capsules, as a powder or granules, or as an aqueous solution or suspension. Tablets for oral use may include the active ingredients mixed with pharmaceutically acceptable excipients such as inert diluents, disintegrating agents, binding agents, lubricating agents, sweetening agents, flavouring agents, colouring agents and preservatives. Examples of suitable inert diluents include sodium and calcium carbonate, sodium and calcium phosphate, and lactose, while corn starch and alginic acid are examples of suitable disintegrating agents. Binding agents include, for example starch and gelatine, while the lubricating agent, if present, may for example, be magnesium stearate, stearic acid or talc. If desired, the tablets may be coated with an enteric coating material, such as glyceryl mono stearate or glyceryl distearate, to delay absorption in the gastrointestinal tract. Capsules for oral use include hard gelatine capsules in which the active ingredient is mixed with a solid diluent, and soft gelatine capsules wherein the active ingredients is mixed with water or an oil such as peanut oil, liquid paraffin or olive oil
Formulations for rectal administration may for example be presented as a suppository with a suitable base comprising, for example, cocoa butter or a salicylate. Formulations suitable for vaginal administration may for example be presented as pessaries, tampons, creams, gels, pastes, foams or spray formulations containing in addition to the active ingredient such carriers as are known in the art to be appropriate. In preparations for intramuscular, intraperitoneal, subcutaneous and intravenous use, the compounds of the invention will typically be provided in a pharmaceutically acceptable diluent to provide sterile solutions, emulsions, liposome formulations or suspensions. Typically the preparation will be buffered to an appropriate pH and isotonicity. For example suitable diluents include Ringer's solution and isotonic sodium chloride. Aqueous suspensions according to the invention may include suspending agents such as cellulose derivatives, sodium alginate, polyvinylpyrrolidone and gum tragacanth, and a wetting agent such as lecithin. Suitable preservatives include ethyl and n-propyl p-hydroxybenzoate. The isolated Core 2 GIcNAc-T inhibitors of the invention may also be incorporated into a food or beverage product. In general a suitable dose of Core 2 GIcNAc-T inhibitor will be in the range of 100 ng to 10 mg per kilogram body weight of the recipient per day, preferably in the range of 1 μg to 5.0 mg/kg/d. Typically the desired dose is presented once daily or several times a day in sub doses. These sub-doses may be administered in unit dosage forms, for example, containing lμg to 1500 mg, preferably 40μg to lOOOmg, and most preferably 50μg to 700 mg of active ingredient per unit dosage form.
The present invention will now be described further by reference to the following non-limiting Examples, Schemes and Figures. Further embodiments falling within the scope of the claim will occur to those skilled in the art in the light of these
FIGURES
Figure 1: is a schematic diagram illustrating the process of purifying protogracillin and gracillin for Dioscorea radix tissue. Purification of dioscin is included for reference. Also illustrated are the purification of protodioscin and pseudoprotodioscin, which may also be purified from Dioscorea radix.
Figure 2: illustrates the structures of protogracillin and gracillin isolated from D. radix.
Figure 3: illustrates preferred steroid moieties of formula VI (a) and VI (b). Figure 4: illustrates preferred steroid moieties Z of the formula VI (c). Figure 5: illustrates further preferred steroid moieties Z of the formula VI
EXAMPLES
Table 1: contains example compounds of the invention. Table 2: is a key to compound names and example references.
13 Table 3: contains C NMR data of the compounds from Dioscorea (in pyridine-d5).
Example 1: Preparation of compounds of the invention; Preparation and purification of Dioscorea radix extracts:
Extraction: Dried, powdered Dioscorea radix (6.2 Kg) was extracted three times with MeOH-H2O (8:2, 36 L, 26L and 24 L, respectively). The first extract (CDXA-13-148-1) was concentrated to 5 L by evaporation under vacuum. The second and third extracts
(CDXA-13-148-2 and 13-148-3) were combined and concentrated to 3.3 L.
Fractionation: The concentrated extracts were loaded on to a Dianion HP20 column
(2.7 Kg) in 2.0 L batches and eluted with H2O and H2O-MeOH (8:2, 6:4 and 4:6 and MeOH 1 L each). The column eluent was monitored by TLC and 8 fractions were collected (CDXA-
13-149-1 to 8). Column Chromatography 1: CDXA-13-149-4 and 13-149-5 were combined (45.4 g), absorbed on to silica gel (10Ig), loaded on to a silica gel column (255 g) and eluted with
EtOAc-MeOH-H2O (80:20:3, 1.7 L; 75:25:3, 2.0 L; 70:30:4, 1.04 L; 65:35:4, 2.08 L; and
60:40:5, 1.05 L). The eluent was monitored by TLC and 26 fractions were collected (CDXA- 13-166-Fl to F26).
Column Chromatography 2: CDXA-13-166-F14 to F22 were combined (25.2 g), absorbed on to silica gel (48.2 g), loaded on to a silica gel column (305 g), and eluted with
EtOAc-MeOH-H2O (80:20:3, 600 ml; 75:25:3, 4120 ml; 70:30:4, 2080ml; 65:35:4, 1050 ml; and 60:40:5, 1050 ml). The eluent was monitored by TLC and 28 fractions were collected (CDXA-13-167-F1-F28).
Purification of Protogracillin: Fractions 13-167-F5 to F16 were combined and concentrated under vacuum, the white powder separated was filtered, dried (CDXA-13-167-
K5, 2.27 g) and heated under refluxed in ACN-H2O (28:72; 100 ml) at 90°C oil bath overnight. The product was further purified by HPLC (Novaprep 5000 semi-preparative HPLC column (Cl 8, 5.0 x 20.0 cm) eluted with ACN-H2O (25:75) for 41.2 minutes then eluted with ACN-H2O (50:50) for another 20 minutes at a flow rate of 100 ml/minute. Monitored at UV 205 nm and the major peak was collected) to give two batches of protogracillin (CDXA-13-168-1, 374 mg; CDXA-13-169-1, 552 mg).
Purification of dioscin and gracillin: Fraction CDXA-13-149-F6 (22.4 g) was loaded on to a C18 column (296 g, 5 X 20 cm), eluted with MeOH-H2O (3:7, 4:6, 45:55, 50:50, 55:45, 60:40, 65:35,7:3, 75:25, 80:20, 85:15 and 90:10, 1000 ml each ), and 8 fractions were collected (CDXA-13-159-F1 to F8). Fraction CDXA-13-159-F7 (4.5 g) was separated on silica gel (257 g silica gel) eluting with EtOAc-MeOH-H2O (85:15:2, 1020 ml; 80:20:3, 3090 ml; 75:25:3, 1030 ml) giving 14 fractions (CDXA-13-160-Fl to F14). The fractions CDXA-13-160-F2 and F3 gave dioscin (CDXA-13-160-1, 404 mg) while fraction CDXA-13- 160-F4 gave gracillin (CDXA-13-160-2, 195 mg) both as white powders. Protogracillin was 96.7% pure as a white powder Gracillin was 90.8% pure as a white powder
i Mass Spec and H NMR Data of the compounds isolated from Dioscorea:
Gracillin: (+) ESI-MS m/z 907.56 [M+Na+]; H NMR (400 Hz, C5D5N) δ 0.69 (3H, d, J = 5.6 Hz, 27-H ), 0.83 (3H, s, 18-H ), 1.07 (3H, s, 19-H ), 1.14 (3H, d, J = 7.2 Hz, 21- H ), 1.79 (3H, d, J = 6.4 Hz, rha 6'-H ), 4.96 (IH, d, J = 7.2 Hz, glc 1-H), 5.12 (IH, d, J = 7.6 Hz, glc 1"-H), 5.33 (IH, d, J = 5.2 Hz, 6-H), 6.41 (IH, s, rha l'-H). Protogracillin: (+) ESI-MS m/z 1087.56 [M+Na ]; H NMR (400 Hz3 C D N) δ 0.91 (3H, s, 18-H ), 1.00 (3H, d, J=6.4 Hz, 27-H ), 1.08 (3H, s, 19-H ), 1.35 (3H, d, J=6.8 Hz, 21- H3), 1.78 (3H, s, J=6.0 Hz, Rha-6'-H ), 4.84 (IH, d, 3=7.6 Hz, GIc-I "'-H), 4.97 (IH, d, J=6.8
Hz, Glc-l'-H), 5.13 (IH, d, J = 8.0 Hz, glc 1"-H), 5.33 (IH, d, J=4.0 Hz, 6-1B), 6.42 (IH, s , Rha-l '-H).
Dioscin: (+) ESI-MS m/z 891.55 [M+Na ]; H NMR (400 Hz, C D N) δ 0.70 (3H, d, J = 4.8 Hz, 27-H ), 0.84 (3H, s, 18-H ), 1.06 (3H, s, 19-H ), 1.15 (3H, d, J = 6.8 Hz, 21-H ), 1.66 (3H, d, J = 4.8 Hz, rha 6"-H ), 1.79 (3H, d, J = 6.4 Hz, rha 6'-H ), 4.97 (IH, d, J = 6.8
Hz, glc 1-H), 5.31 (IH, d, J = 4.0 Hz, 6-H), 5.91 (IH, s, rha 1"-H), 6.45 (IH5 s, rha l '-H).
EXAMPLE 2.
Biological activity of compounds. 2a. Cell culture
The human leukocytic cell-line (U937) was cultured in RPMI supplemented with 10% foetal calf serum, 2 mM glutamine, 100 IU/ml penicillin and 100 μg/ml streptomycin. 2b. Assay of core 2 GkNAc-T activity Three approaches may be used:
(i). Glucose induction of Core 2 GIcNAc-T leukocytes (U937 cells) are exposed to normal glucose (5.8 mM) or high glucose (15 mM) for 24 hours at 37°C. After incubation, the cells maybe lysed and frozen at -200C until used for the measurement of core 2 GIcNAc-T. or used immediately.
(ii). TNF-α induction of core 2 GIcNAc-T. Human leukocytes(U937 cells) are exposed to human recombinant TNF-alpha (8pg/ml) in the presence and absence of test compounds After 24h incubation, the activity of core 2 GIcNAc-T was measured, and expressed as pmoles/h/mg protein
(iii). Cell free assay of core 2 GIcNAc-T in cell free assays of core 2 GIcNAc-T Heart lysates from either from TNF-alpha over expressing transgenic mice (female, B6.SJL- Tg (TNF) supplied by Taconic-M+B, Bomholtveg 10, 8680 Ry, Denmark) or from BB rats (Festing M.F.W. (Ed.). Inbred strains in biomedical research. The Macmillan Press LTD, London (1979). ISBN 0-333-23809-5.) was exposed to various concentrations of test compound for Ih at 370C. Activity of core 2 GIcNAc-T was measured, and expressed as pmoles/h/mg protein. 2c. Measurement of core 2 GIcNAc-T activity:
To measure core 2 GIcNAc-T activity, leukocytes were washed in PES, frozen and lysed in 0.9% Triton X-IOO at 00C. The activity of core 2 GIcNAc-T was measured as described previously (16). Cell free assays are preformed by substituting heart lysates for cell lysates.
Assays were performed in 50 mM 2(N-moφholino)ethanesulfonic acid (MES, Sigma, Dorset, UK), pH 7.0, 1 mM UDP-6 [Η]-N-acetylglucosamine (16,000 dpm/nmol, NEN Life Science Products, Hounslow, UK), 0.1 M GIcNAc (Sigma, Dorset, OK), 1 mM Galβl-3GalNAcα-p-nitrophenol (Sigma, Dorset, UK) as substrate, and 16 μl of lysate (100- 200 μg protein) for a final volume of 32 μl. After incubating the mixture for 1 hour at 370C, the reaction was terminated with 1 ml of ice-cold distilled water and processed on a Cl 8 Sep- Pak column (Waters-Millipore, Watford, UK). After washing the column with 20 ml of distilled water, the product was eluted with 5 ml of methanol. The radioactivity of the samples was counted in a liquid scintillation β-counter (LKB-Wallac, London, UK). Endogenous activity of core 2 GIcNAc-T was measured in the absence of the added acceptor. The specific activity was expressed as pmoles/h/mg of cell protein. Ih each case, the protein concentration was determined with BioRad protein assay (BioRad, Hertfordshire, UK).
Table 4: Approximate Ic^n values fnM) for example compounds
* Assays carried out on heart lysates of TNF-α mice as described above.
** Reference compounds
*** 89% inhibition of core 2 GIcNAc-T at 22nM f = no activity detected at 22.5 nM.
Table 5. Approximate purities of compounds used
REFERENCES
1. Hu K. Planta Medica, 63(2), 161 -165 (1997).
2. Yang D. et al Journal of Agricultural and Food Chemistry, 51(22), 6438- 6444 (2003). 3. Aquino R. et alJ. Nat. Products 49(2) 1096-1101 (1986).
4. Tomova M. et al Int Conf. Chem Biotechnol. 3, (1) 298-302.
5. Liu H.W. et alJ Asian Nat Prod Res, 5(4):241-247 (2003).
6. Sang S. Phytochemistiy , 52(8), 1611-1615 (1999).
7. Zheng Q. et al Steroids, 69(2), 111-119 (2004). 8. Hernandez, J. C. Bioorganic & Medicinal Chemistry 12(16), 4423-4429
(2004).
9. Iαoue T. et al Phytochemistry 40(2), 521 -5 (1995).
10. Kawasaki T. et al Chemical & Pharmaceutical Bulletin, 22(9), 2164-75 (1974). 11. Tsukamoto T and Kawasaki T. Pharm Bull 4(2):104-8 (1956).
12. Chen C. et al Yunnan Zhiwu Yanjiu, 9(4), 495-502 (1987).
13. Tang S. et al Yunnan Zhiwu Yanjiu, 9(2), 233-8 (1987).
14. Kintya P. (Translation of Khimiya Prirodnykh Soedinenii), [Volume Date 1997], 33(6), 658-662 (1998). 15. Yin F. et al J. Nat. Products , 67(6), 942-952 (2004).
16. Fujita S. et al Phytochemistry, 38(2), 465-72 (1995).
17. Yoshikawa K et al. Chemical & Pharmaceutical Bulletin, 40(9), 2287-91 (1992).
18. Yoshikawa K. et al Chemical & Pharmaceutical Bulletin, 40(9), 2275-8 (1992).
19. Renault J. et al, Phytochemistry, 44(7), 1321-1327 (1997).
20. Ravikumar P. R. et al. Indian J. Chem. 26B, 1012-1017 (1987).
21. Yoshikawa M. et al. Heterocycles 47, 397-405 (1998).
22. Mimaki Y. et al Phytochemistry. 33(3):675-82 (1993). 23. Liu C. et al. YaoxueXuebao, 18(8), 597-606 (1983).
24. Chen C. et al Yunnan Zhiwu Yanjiu, 6(1), 111-17 (1984).

Claims (25)

1. Use of a compound of the formula I in the manufacture of a medicament for the treatment of a condition involving detrimental activity of the enzyme core 2 GIcNAc-T
wherein:
R1 is H, Ci-6 alkyl, Ci-6 hydroxyalkyl, Ci-6 alkoxy or Ci.6-alkoxy-Ci-(;-alkyl;
R2 is H, -OH or Ci-6 alkoxy;
Sac1 and Sac2 are independently selected saccharide moieties; and
Z is a steroid moiety; or a pharmaceutically acceptable salt, ether or ester thereof.
2. Use according to claim lin which R1 is -H, -CH3 or -CH2OH.
3. Use according to either one of claims 1 or 2 in which R1 is -CH2OH and the ring is a glucose moiety.
4. Use according to any one of claims 1 to 3 in which R2 is -OH.
5. Use according to any one of claims 1 to 4 in which Sac1 is selected from a pentose or and aldohexose.
6. Use according to any one of claims 1 to 5 in which Sac1 is an aldohexose.
7. Use according to any one of claims 1 to 6 in which Sac1 is glucose.
8 Use according to any one of claims 1 to 7 in which Sac2 is selected from, glucose, galactose, arabinose, xylose and rhamnose.
9. Use according to any one of claims 1 to 8 in which Sac2 is rhamnose.
10. Use according to any one of claims 1 to 9 in which the steroid moiety Z is of the formula
wherein:
R3, R10 and R18 are independently selected from H and -OH; R4 and R25 are independently selected from C^ alkyl; R5, R7 and R12 are independently selected from H and Ci-6 alkyl;
R6 is H or -OH or the H normally also present is absent and R6 is =0;
R8 is H, -OH or Ci-6 acyl or a group selected from VII a or VII b.
VE a VIIb
R9 is H.
R11 is H, C1-6 alkyl or -OH or R9 and Ru taken together form a -CH2-CH2- group;
R13 is H, C1-6 alkyl or Ci-6hydroxyalkyl; preferably R13 is H, -CH2OH, or -CH3.
R26 is Ci-6 hydroxyalkyl;
R27 is C1-6 alkyl, Ci-6 hydroxyalkyl or Ci-6 alkyl substituted by S4.
R28 is Ci-8 alkyl, C2-8 alkenyl or C2-8 alkynyl;
S4 is a saccharide; and
Represents either a single bond or a double bond.
11. Use according to claim 17 in which the steroid moiety Z incorporates a further group selected from the group consisting of:
VI d VI e
Wherein:
R ,2z0υ is H or-OH; R14, R19, R23 and R29 are independently selected from Ci-6 alkyl; R15 is H or -OH;
R16 is H, -OH or Q-6 alkoxy or R15 and R16 taken together represent the second bond of a double bond joining adjacent carbon atoms; R17 is Cj.6 alkyl, C2-6 alkenyl, C2-6 alkynyl or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of -OH, Ci-6 alkoxy and Sac3; R21 is C1-6 alkyl, Ci-6 hydroxyalkyl or =CH2; R22 is -OH;
R24 is Ci-6 alkyl, C2-6 alkenyl or C2-6 alkynyl; R30 is C1-6 hydroxyalkyl or Ci-6 alkyl substituted by Sac5;
R31 is Ci-6 alkyl;
Sac3 and Sac5 are independently selected saccharide moieties; and X is either O or NH.
12. Use according to either one of claims 10 or 11 in which R17 is C2-6 alkenyl or a Ci-6 alkyl group substituted by one or more groups selected from the group consisting of -OH,
-OCH3 and Sac3.
13. Use according to any one of claims 10 to 12 in which R17 is selected from the group comprising 3-methyl but-2-eneyl, 2-methyl-prop-2-enyl, 3-methylbutanyl substituted at the 4- position by Sac3, l-hydroxy-3-methylbutanyl substituted at the 4-position by Sac3 or 1- methoxy-3-methylbutanyl substituted at the 4-position by Sac3.
14. Use according to any one of claims 10 to 13 in which Sac3 is glucose
15. Use according to any one of claims 10 to 14 in which R21 is -CH3, -CH2OH or =CH2.
16. Use according to any one of claims 10 to 15 in which R27 is -CH3 or -CH2-SaC4.
17. Use according to claim 15 in which Sac4 is glucose.
18. Use according to any one of claims 10 to 17 in which R28 is 3-ethyl-4-methyl- pentanyl or 5-methyl-hex-4-enyl;.
19. Use according to any one of claims 10 to 18 in which R30 is -CH2-SaC5.
20. Use according to any one of claim 18 in which Sac5 is glucose.
21. Use according to any one of claims 10 to 20 in which X is O .
22. Use according to any one of claims 1 to 21 in which the compound is selected from the group consisting of:
Protogracillin protoneogracillin methylprotogracillin methylprotoneogracillin, pseudoprotogracillin, dracenoside Q, dioscoreside E dracenoside P tuberoside C, icogenin, gracillin, collettiside IV, 17-OH gracillin, dracaenoside H dracaenoside L, dracaenoside I , lilioglycoside H, lilioglycoside I, dracaenoside D, , neoalsoside A, neoalsoside C, hoduloside V, Lotoside π, compound 17, compound 21 and compound 25.
23. Use according to any one of claims 1 to 22 in which the condition to be treated is selected form the group consisting of vascular diseases, autoimmune and inflammatory conditions.
24. Use according to claims 1 to 22 in which the condition to be treated is selected from the group consisting of: multiple sclerosis, myopathy, retinopathy, nephropathy, atherosclerosis, asthma, rheumatoid arthritis, inflammatory bowel disease, transplant rejection, ischemia reperfusion injury, restenosis, ileitis, Crohn's disease, thrombosis, cholitis, lupus, frost bite injury, acute leukocyte mediated lung injury, traumatic shock, septic shock, nephritis, psoriasis, cholicytitis, cirrhosis, diverticulitis, fulminant hepatitis, gastritis, gastric and duodenal ulcers, hepatorenal syndrome, irritable bowel syndrome, jaundice, pancreatitis, ulcerative cholitis, Wiskott-Aldrich syndrome T-cell activation, AIDS, infection with viruses, bacteria, protozoa and parasites adapted to use core 2 derived glycans, cancer and cancer metastasis.
25. A pharmaceutical composition comprising a compound of the formula I for use in the treatment of a condition described in claims 23 or 24
AU2006264635A 2005-07-06 2006-07-06 Core 2 GlcNAc-T inhibitors Ceased AU2006264635B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GBGB0513888.8A GB0513888D0 (en) 2005-07-06 2005-07-06 Core 2 GLCNAC-T Inhibitors II
GB0513888.8 2005-07-06
PCT/GB2006/002500 WO2007003948A2 (en) 2005-07-06 2006-07-06 Core 2 glcnac-t inhibitors

Publications (2)

Publication Number Publication Date
AU2006264635A1 AU2006264635A1 (en) 2007-01-11
AU2006264635B2 true AU2006264635B2 (en) 2013-02-14

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