AU2003267185A1 - Polyhydroxyalkanoate production by coenzyme a-dependent aldehyde dehydrogenase pathways - Google Patents

Polyhydroxyalkanoate production by coenzyme a-dependent aldehyde dehydrogenase pathways

Info

Publication number
AU2003267185A1
AU2003267185A1 AU2003267185A AU2003267185A AU2003267185A1 AU 2003267185 A1 AU2003267185 A1 AU 2003267185A1 AU 2003267185 A AU2003267185 A AU 2003267185A AU 2003267185 A AU2003267185 A AU 2003267185A AU 2003267185 A1 AU2003267185 A1 AU 2003267185A1
Authority
AU
Australia
Prior art keywords
coa
organism
aldehyde dehydrogenase
dependent aldehyde
pha
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2003267185A
Other versions
AU2003267185A8 (en
Inventor
Frank A. Skraly
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Yield10 Bioscience Inc
Original Assignee
Metabolix Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Metabolix Inc filed Critical Metabolix Inc
Publication of AU2003267185A1 publication Critical patent/AU2003267185A1/en
Publication of AU2003267185A8 publication Critical patent/AU2003267185A8/en
Abandoned legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0008Oxidoreductases (1.) acting on the aldehyde or oxo group of donors (1.2)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/52Genes encoding for enzymes or proenzymes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P7/00Preparation of oxygen-containing organic compounds
    • C12P7/62Carboxylic acid esters
    • C12P7/625Polyesters of hydroxy carboxylic acids

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  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Plant Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Materials For Medical Uses (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
  • Medicinal Preparation (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
  • Prostheses (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Adhesives Or Adhesive Processes (AREA)

Abstract

The present invention provides a method of producing polyhydroxyalkanoate (PHA) polymers comprising at least one hydroxyacyl monomer selected from the group consisting of 3-hydroxypropionate, 3-hydroxyvalerate, 4-hydroxybutyrate, 4-hydroxyvalerate, 5-hydroxyvalerate, and 3-hydroxyhexanoate, comprising: expressing in an organism genes encoding a polyhydroxyalkanoate (PHA) synthase and a CoA-dependent aldehyde dehydrogenase, feeding a chemical that is converted by the organism to at least one hydroxyacyl-CoA monomer by an enzyme-catalysed pathway that includes the CoA-dependent aldehyde dehydrogenase activity and allowing polymerisation of the at least one hydroxyacyl-CoA monomer by the PHA synthase to form PHA polymers, and recovering the thus-produced PHA polymers, wherein the organism is produced from a wild-type organism having an endogenous CoA-dependent aldehyde dehydrogenase gene which is modified by gene mutation to increase CoA-dependent aldehyde dehydrogenase activity, or wherein the organism is a recombinant organism in which a gene is recombinantly expressed to encode the CoA-dependent aldehyde dehydrogenase. The present invention also provides a recombinant organism for use in the foregoing method. The present invention also provides a method comprising the step of amplifying a DNA sequence encoding the eutE gene from an E. coli genome using the following oligonucleotides primers: 5' GGT GGT ACC TTA AGA GGA GGT TTT TAT GAA TCA ACA GGA TAT TGA ACA-3' (SEQ ID NO: 1) and 5'-GGT GCG GCC GCT TAA ACA ATG CGA AAC GCA TCG-3' (SEQ ID NO: 2).
AU2003267185A 2002-09-12 2003-09-12 Polyhydroxyalkanoate production by coenzyme a-dependent aldehyde dehydrogenase pathways Abandoned AU2003267185A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US41008702P 2002-09-12 2002-09-12
US60/410,087 2002-09-12
PCT/US2003/028842 WO2004024876A2 (en) 2002-09-12 2003-09-12 Polyhydroxyalkanoate production by coenzyme a-dependent aldehyde dehydrogenase pathways

Publications (2)

Publication Number Publication Date
AU2003267185A1 true AU2003267185A1 (en) 2004-04-30
AU2003267185A8 AU2003267185A8 (en) 2004-04-30

Family

ID=31994056

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2003267185A Abandoned AU2003267185A1 (en) 2002-09-12 2003-09-12 Polyhydroxyalkanoate production by coenzyme a-dependent aldehyde dehydrogenase pathways

Country Status (8)

Country Link
US (1) US8071355B2 (en)
EP (2) EP2365088B1 (en)
JP (2) JP4628103B2 (en)
AT (1) ATE505559T1 (en)
AU (1) AU2003267185A1 (en)
DE (2) DE10075400T8 (en)
ES (1) ES2395053T3 (en)
WO (1) WO2004024876A2 (en)

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KR100979694B1 (en) 2005-05-24 2010-09-02 한국과학기술원 Cells or Plants Having an Producing Ability of Polylactate or Its Copolymers and Method for Preparing Polylactate or Its Copolymers Using the Same
TWI568847B (en) 2007-03-16 2017-02-01 奇諾麥提卡公司 Compositions and methods for the biosynthesis of 1,4-butanediol and its precursors
US7947483B2 (en) 2007-08-10 2011-05-24 Genomatica, Inc. Methods and organisms for the growth-coupled production of 1,4-butanediol
WO2009157702A2 (en) * 2008-06-24 2009-12-30 (주)Lg화학 Method for preparing polylactate and copolymer thereof using a mutant microorganism with enhanced polylactate, and the copolymer producing capability thereof
BRPI0918483A2 (en) 2008-09-10 2020-07-14 Genomatica, Inc non-naturally occurring microbial organism, and method of producing a compound
US20100184173A1 (en) * 2008-11-14 2010-07-22 Genomatica, Inc. Microorganisms for the production of methyl ethyl ketone and 2-butanol
KR20110104492A (en) 2008-12-12 2011-09-22 메타볼릭스 인코포레이티드 Green process and compositions for producing poly(5hv)and 5 carbon chemicals
KR101293886B1 (en) * 2009-02-05 2013-08-07 주식회사 엘지화학 Recombinant Ralstonia eutropha Having an Producing Ability of Polylactate or Its Copolymers and Method for Preparing Polylactate or Its Copolymers Using the Same
JP5964747B2 (en) 2009-06-04 2016-08-03 ゲノマチカ, インク. Microorganisms and related methods for the production of 1,4-butanediol
VN29235A1 (en) * 2009-06-04 2012-03-26
CA2777459A1 (en) * 2009-10-13 2011-04-21 Genomatica, Inc. Microorganisms for the production of 1,4-butanediol, 4-hydroxybutanal, 4-hydroxybutyryl-coa, putrescine and related compounds, and methods related thereto
US8530210B2 (en) 2009-11-25 2013-09-10 Genomatica, Inc. Microorganisms and methods for the coproduction 1,4-butanediol and gamma-butyrolactone
US8637286B2 (en) 2010-02-23 2014-01-28 Genomatica, Inc. Methods for increasing product yields
US8048661B2 (en) * 2010-02-23 2011-11-01 Genomatica, Inc. Microbial organisms comprising exogenous nucleic acids encoding reductive TCA pathway enzymes
FR2964014B1 (en) * 2010-08-31 2013-04-05 Ifremer NUCLEUS COATED WITH A FILMOGENEOUS COATING WITH ANTIBACTERIAL AND CICATRISANT PROPERTIES AND METHOD OF OBTAINING THE SAME
FR2968506B1 (en) * 2010-12-14 2013-02-08 Ifremer NUCLEUS COVERED WITH PHA
CN102212501B (en) * 2011-03-31 2013-06-12 山东大学 Recombinant escherichia coli and method for applying same to produce poly(3-hydroxybutyrate-3-hydroxyvalerate) (PHBV) by utilizing single carbon source
EP2702138A2 (en) * 2011-04-29 2014-03-05 Metabolix, Inc. Green process for producing polyhydroxyalkanoates and chemicals using a renewable feedstock
AU2012299191B2 (en) 2011-08-19 2016-03-03 Genomatica, Inc. Microorganisms and methods for producing 1,3-butanediol and related alcohols
BR112014010448A2 (en) 2011-11-02 2017-04-18 Genomatica Inc microorganisms and methods for caprolactone production
BR112014030202A2 (en) 2012-06-04 2017-09-12 Genomatica Inc microorganisms and methods for the production of 4-hydroxybutyrate 1,4-butanediol and related compounds
WO2014062564A1 (en) 2012-10-15 2014-04-24 Genomatica, Inc. Microorganisms and methods for production of specific length fatty alcohols and related compounds
US20160040172A1 (en) 2013-03-15 2016-02-11 Genomatica, Inc. Microorganisms and methods for producing butadiene and related compounds by formate assimilation
WO2015077752A1 (en) 2013-11-25 2015-05-28 Genomatica, Inc. Methods for enhancing microbial production of specific length fatty alcohols in the presence of methanol
EP3167066A4 (en) 2014-07-11 2018-03-07 Genomatica, Inc. Microorganisms and methods for the production of butadiene using acetyl-coa
US20170298363A1 (en) 2014-09-18 2017-10-19 Genomatica, Inc Non-natural microbial organisms with improved energetic efficiency
CN108026214B (en) 2015-05-30 2021-03-02 基因组股份公司 Vinyl isomerase-dehydratase, enol-dehydratase, linalool-dehydratase and/or crotyl alcohol dehydratase, and preparation and use thereof
JP7250025B2 (en) 2017-10-26 2023-03-31 ノロオ アイシー シーオー.エルティーディー. Production and separation of 3-hydroxypropionic acid
US11566250B2 (en) 2017-10-26 2023-01-31 Noroo Ic Co., Ltd. Production and separation of 3-hydroxypropionic acid
JP7209434B2 (en) * 2019-10-31 2023-01-20 株式会社カネカ Method for producing polyhydroxyalkanoic acid and use thereof

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ES2362405T3 (en) * 2000-10-27 2011-07-04 Metabolix, Inc. COMPOSITIONS THAT INCLUDE POLYHYDROXIALCANOATS AND REACTIVE MONOMERS.

Also Published As

Publication number Publication date
DE10075400T1 (en) 2012-10-11
ES2395053T3 (en) 2015-10-08
EP2365088A2 (en) 2011-09-14
ES2395053T1 (en) 2013-02-07
ATE505559T1 (en) 2011-04-15
DE60336757D1 (en) 2011-05-26
JP2006507811A (en) 2006-03-09
US20040106176A1 (en) 2004-06-03
EP2365088B1 (en) 2015-05-27
EP1581619A2 (en) 2005-10-05
JP4628103B2 (en) 2011-02-09
EP1581619A4 (en) 2007-02-14
EP2365088A3 (en) 2012-01-11
WO2004024876A2 (en) 2004-03-25
US8071355B2 (en) 2011-12-06
JP2010268797A (en) 2010-12-02
EP1581619B1 (en) 2011-04-13
WO2004024876A3 (en) 2006-05-26
DE10075400T8 (en) 2013-04-25
AU2003267185A8 (en) 2004-04-30

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