AU2001294120A1 - Chimeric reporter system for cell surface receptor-ligand binding - Google Patents

Chimeric reporter system for cell surface receptor-ligand binding

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Publication number
AU2001294120A1
AU2001294120A1 AU2001294120A AU9412001A AU2001294120A1 AU 2001294120 A1 AU2001294120 A1 AU 2001294120A1 AU 2001294120 A AU2001294120 A AU 2001294120A AU 9412001 A AU9412001 A AU 9412001A AU 2001294120 A1 AU2001294120 A1 AU 2001294120A1
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Australia
Prior art keywords
gene
reporter
cell
cells
receptor
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AU2001294120A
Inventor
Knut Kotarsky
Bjorn A. Olde
Christer S. O. Owman
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Owman Invest Ltd
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Owman Invest Ltd
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Publication of AU2001294120A1 publication Critical patent/AU2001294120A1/en
Assigned to OWMAN INVEST, LTD. reassignment OWMAN INVEST, LTD. Request for Assignment Assignors: KOTARSKY, KNUT, OLDE, BJORN, OWMAN, CHRISTER
Abandoned legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/65Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression using markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6897Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids involving reporter genes operably linked to promoters
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/435Assays involving biological materials from specific organisms or of a specific nature from animals; from humans
    • G01N2333/705Assays involving receptors, cell surface antigens or cell surface determinants
    • G01N2333/72Assays involving receptors, cell surface antigens or cell surface determinants for hormones
    • G01N2333/726G protein coupled receptor, e.g. TSHR-thyrotropin-receptor, LH/hCG receptor, FSH

Description

REPORTER SYSTEM FOR CELL SURFACE RECEPTOR-LIGAND BINDING
CROSS-REFERENCE TO RELATED APPLICATION
[001] This application relies on, and claims the benefit of, U.S. Provisional
application Serial No. 60/230,705, filed September 7, 2000, the entire disclosure of which is
incorporated herein by reference.
BACKGROUND OF THE INVENTION
Field of the Invention
[002] This invention relates to the field of recombinant nucleic acid technology. It
further relates to the field of drug discovery. More particularly, this invention relates to recombinant nucleic acids, recombinant cells, kits, and assays for detection of substances that
interact with cell surface receptors, such as G-protein coupled receptors (GPCRs), tyrosine
kinase-type receptors, and ion channels. The recombinant nucleic acids, recombinant cells,
kits, and assays are well suited for high-throughput screening (HTS).
Description of the State of the Art
[003] Various assays for detecting substances that interact with cell surface receptors
are known in the art. Generally, these assays rely on recombinant cells that express a receptor
of interest, and link interaction of a substance and the receptor to up- or down- regulation of a
reporter gene. The goal of many of these assays is to identify substances that are pharmaceutically active. Such pharmaceutically active substances can be used as drugs to counteract undesirable over- or under-expression of a given signal pathway, which may be associated with a disease state or disorder.
[004] For example, U.S. Patent No. 5,401,629 to Harpold et al. discloses recombinant cells and assay systems for assaying compounds for their agonist or antagonist activity on ion channels and/or cell surface receptors. The "629 patent discloses a recombinant cell having receptors on its cell surface that is transformed with a reporter gene construct. The construct comprises 1) a transcriptional control element that is responsive to an intracellular condition that occurs when the receptor interacts with a compound having agonist or antagonist activity for the receptor, and 2) a reporter gene encoding a detectable gene product, where the reporter gene is operatively associated with the transcriptional control element. The transcriptional control element is responsive to calcium, cAMP, or NGF. The receptor to be assayed is a G-protein coupled receptor, such as adrenergic receptors, and muscarinic receptors. Reporters are CAT, firefly luciferase, bacterial luciferase, and alkaline phosphatase. The cell line must be capable of transfection, and have low or no background levels of the specific receptor of interest. Receptors are listed at column 5, line 42 through column 6, line 12. The examples disclose recombinant mammalian cells and assays. However, the assays of the "629 patent rely on time-consuming and labor-intensive clonal selection methods to identify and obtain cells having high levels of expression. In addition, the assays suffer from high levels of background signal, which reduces the sensitivity of the assay.
[005] U.S. Patent No. 5,436,128 to Harpold et al. discloses methods for detecting and identifying substances that act as agonists or antagonists of specific cell surface localized receptors and ion channels, as well as recombinant cells useful in the methods. The recombinant cells of the '128 patent are genetically engineered to express specific ion channels or cell surface receptors, and also contain DNA constructs that include a reporter gene coupled to a regulatory region that is controlled by signals originating from the receptor or ion channel. The recombinant cells can endogenously express the cell surface protein or can express heterologous DNA that encodes the cell surface protein. The cell surface receptor is a G-protein coupled receptor, such as a muscarinic receptor. The regulatory region comprises regulatory sequences from the c-fos gene, the VIP gene, the somatostatin gene, the proenkephalin gene, the carboxykinase gene, and the nerve growth factor- 1 gene, as well as cAMP responsive elements and elements responsive to intracellular calcium ion levels. The reporter gene is CAT, firefly luciferase, bacterial luciferase, β-galactosidase, or alkaline phosphatase. The examples disclose recombinant mammalian cell lines and assays. However, as with the assays of the '629 patent, the assays of the '128 patent require clonal selection methods that are time consuming, and the assays suffer from high levels of background signal.
[006] U.S. Patent No. 5,854,004 to Czernilofsky et al. discloses a process for screening substances having modulating effects on a receptor-dependent signal transmission pathway, and recombinant cells useful in such a process. The assay uses recombinant cells expressing G-protein coupled receptors. The recombinant cells contain a recombinant DNA encoding a reporter that is coupled to a regulatory sequence that responds to the change in an intracellular concentration of a molecule associated with activity of the receptor. The regulating molecule is inositol-l,4,5-triphosphate, diacylglycerol, cAMP, or calcium. The regulatory element is a TRE or CRE regulating element. Mammalian cells are disclosed as
useful. Reporter genes are alkaline phosphatase, β-galactosidase, CAT, and luciferase.
Receptors are the G-protein coupled receptors. However, as with the '629 and '128 patents, the clonal selection method of the '004 patent is time and labor intensive, and results in a high
background-to-signal ratio.
[007] Himmler et al. (Journal of Receptor Research, 13(l-4):79-94, 1993) discloses
a cellular screening system that measures the biological activity of drugs acting on receptors.
The system relies on coupling of the receptor to the cAMP signal transduction pathway to
transcriptionally activate a reporter gene operative linked to multiple cAMP responsive
elements (CREs). A stable recombinant cell line expressing the human dopamine D! receptor and luciferase under the control of CREs showed luciferase induction upon stimulation with
apomorphine.
[008] In addition, Weyer et al. (Receptors and Channels, 1:193-200, 1993) discloses
a cellular assay system for the detection of substances that modulate the activity of G-protein
coupled receptors by linking the expression of a reporter gene to activation of the G-protein
coupled receptor through the phospholipase C system. Recombinant cells are disclosed that
contain a luciferase gene under the control of the ICAM-1 gene regulatory region. These
recombinant cells can further contain constructs that encode the human neurokinin 2 receptor
or the human serotonin 2 receptor. Expression of the luciferase gene is controlled by
interaction of molecules with the receptors encoded by the recombinant cells.
[009] Several reporter systems have been described for receptors coupling to
adenylate cyclase (Chen, W., et al, Anal Biochem., 22:349-54, 1995) as well as for receptors that act by mobilizing Ca2+ (Weyer et al, supra; Stratowa, C., et al, J. Recept. Signal
Transduct. Res., 15:617-30, 1995; Sista, P., et al, Mol. Cell. Biochem., 141:129-34, 1994;
Schadlow, V., et al, Mol. Bid. Cell, 3:941-51, 1995). However, none of them has been
optimized thoroughly for efficient mass screening of chemical compounds in varying milieus.
[010] More recently, systems for detecting alterations in the activity of signal
transduction pathways as a result of interaction of cell surface receptors and a substance have
included dual reporter constructs. For example, Stables et al. (Journal of Receptor & Signal
Transduction Research, 19(l-4):395-410, 1999) discloses the simultaneous use of two
different luciferase reporters, each responsive to a different G-protein coupled receptor, for
the detection of substances that interact with the receptors. In the assay, recombinant Chinese
Hamster Ovary (CHO) cells expressing the human Vasopressin V2 receptor and containing
the firefly luciferase reporter gene operably coupled to a cAMP responsive element, were co- cultured with recombinant CHO cells expressing the human β2-adrenoceptor and containing
the Renilla luciferase reporter gene operably coupled to a cAMP responsive element.
Because the firefly luciferase and Renilla luciferase activities depend on different substrates
and reaction conditions, activation of one, for example as a result of the recombinant cells coming in contact with a substance that interacts with a recombinant receptor, can be
differentiated from activation of the other. Thus, the assay can provide, from a single culture,
information about whether a sample contains a substance that activates a single, or even
multiple, specific G-protein coupled receptors. However, like the assays discussed above, the
assay of Stables et al. utilizes time-consuming clonal selection methods to identify those cells that are most useful for the assay. [Oi l] The superfamily of G-protein coupled receptors (GPCRs), or heptahelix receptors, is the most widely distributed among membrane receptors in eukaryotic cells (see, or example, Watson, S., and Arkinstall, S., The G-Protein Linked Receptor FactsBook, Academic Press, London, 1994). They receive signals from a large variety of substances from many different chemical classes, resulting in diverse intracellular, tissue, and organ responses. Among the various substances that interact with G-protein coupled receptors, the chemotactic substances form an extensive group. This group regulates the trafficking of immune cells during a microbial challenge. In addition, G-protein coupled chemokine receptors have recently received extensive interest because several of them are necessary for the HIV-1 virus to fuse with, and subsequently infect, CD4-positive cells (Weiss, R.A., and
Clapham, P.R., Nature, 381:647-648, 1996; Hill, CM., and Liftman, D.R., Nature, 382:668- 669, 1996; Fauci, A.S., Nature, 384:529-533, 1996). Other G-protein coupled receptors include muscarinic acetylcholine receptors, adrenergic receptors, serotonin receptors, and opsin receptors, as well as other neurotransmitter receptors and hormone receptors.
[012] Members of the superfamily of G-protein coupled receptors constitute targets for more than 70% of the pharmaceutical drugs in current clinical use. Because of the multitude of physiological actions they mediate, a large proportion of drug testing is conducted on this kind of membrane receptor. The advent of high-throughput screening (HTS) has created a need for efficient cell-based reporter systems specially designed for GPCRs. [013] While recombinant G-protein coupled receptor assays are known, many of which are applicable to high-throughput screening, there still exists a need in the art for improved assays that are more sensitive and not as labor and time intensive.
SUMMARY OF THE INVENTION
[014] The present invention addresses shortcomings in the art by providing a rapid, reliable, relatively inexpensive reporter system that is amenable to high-throughput screening.
The invention provides genetically engineered reporter systems that can be used to detect substances that interact with selected cell surface receptors. Thus, the invention provides new, optimized, cell-based reporter systems that are well suited for GPCRs that act through Ca2* mobilization and signal through the mitogen-activated protein (MAPK) cascade.
[015] The systems of the invention use recombinant cells containing reporter constructs in which a chimeric reporter gene is operably linked to at least one transcription control element, such as a second messenger-responsive element, such that activation or, by the inclusion of silencer motifs, repression of expression of the chimeric reporter gene occurs as an ultimate result of binding of a ligand to a cell surface receptor or interaction of a ligand with an ion channel on the surface of the recombinant cell. The reporter construct controls the expression of a novel chimeric reporter gene. The chimeric reported gene comprises the coding sequences from two separate genes, each of which producing a detectable gene product. In embodiments, one of the genes encodes a gene product that has an activity that is intrinsic (i.e., does not require the addition of substrate molecules or activator molecules), while the other gene encodes a protein that has an activity that can be detected at very low levels and also provides a high signal-to-noise ratio. In certain embodiments, the chimeric ' reporter gene comprises sequences encoding a green fluorescent protein (GFP), such as the enhanced green fluorescent protein (EGFP), or sufficient sequences to encode a portion of a GFP that can fluoresce. In certain embodiments, the chimeric reporter gene also comprises sequences encoding a luciferase protein, such as the Photinus luciferase, or sufficient sequences to encode a portion of a luciferase that can luminesce. The reporter construct of the invention allows those practicing the invention to perform clonal selection by detection of a signal due to the GFP. Fluorescence Activated Cell Sorting (FACS) or fluorescence microscopy can be used for detecting the signal, allowing for rapid single cell analysis and sorting. At the same time, a highly sensitive and reliable reporter signal is achieved by luciferase. Due to the intrinsic fluorescence of GFPs, the need to pre-load substrate molecules in order to detect cells that express the reporter gene is not required. Cell handling is therefore very simple, which makes the assay robust. Furthermore, cell viability after clonal selection is very high.
[016] Accordingly, the present invention provides recombinant cells containing the reporter constructs of the invention. In addition to containing the reporter constructs, the recombinant cells can express at least one exogenous receptor, which can be, among other things, a G-protein coupled receptor, other membrane receptors, or an ion channel protein. That is, the recombinant cells can naturally express a G-protein coupled receptor or can contain non-homologous nucleic acids encoding G-protein coupled receptors. The recombinant cells of the invention express the reporter gene at high levels when the cells are exposed to substances that interact with a G-protein coupled receptor present on the cell surface, but do not express it to any appreciable level in the absence of a substance that interacts with a G-protein coupled receptor present on the cell surface.
[017] The present invention also provides a method of making a recombinant cell. The method can include transforming, transfecting, or otherwise introducing a reporter construct of the invention into a suitable host cell to create a recombinant cell. The method can additionally include transforming, transfecting, or otherwise introducing a heterologous nucleic acid that expresses a cell surface receptor, such as a G-protein coupled receptor, into the host cell. The method can include preparing a stable recombinant cell that expresses heterologous proteins of interest from genes that are integrated into the host cell's genome. The method can also include procedures for performing fast clonal selection, for example by FACS or by ocular inspection of reporter activity (by changes in fluorescence, color, etc.). The method can also include preparing a transiently transformed recombinant cell that expresses at least one heterologous gene that is present in the recombinant as an extra- genomic element, such as a plasmid. The recombinant cells can be cell lines, and can be mammalian cells, insect cells, or other appropriate cells.
[018] Thus, the present invention provides reporter constructs. The reporter constructs comprise a chimeric reporter gene that is operably linked to at least one responsive element. The reporter constructs are optimized by the practitioner for high level and stringent expression of the chimeric reporter gene in the chosen host cell and for the chosen cell surface receptor. For example, the number and spacing of the responsive elements present on the reporter construct can be optimized to provide high level expression only in the presence of a sufficient amount of the molecule to which the element is responsive. In this way, the reporter construct can help to minimize background signal and aid in the reliability and sensitivity of the overall system. In embodiments, the systems of the invention are used to
detect substances that interact with target G-protein receptors. In embodiments, the invention
uses a synthetic enhancer composed of multiple TPA (12-O-tetradecanoylphorbol- 13 -acetate)
responsive elements (TRE) fused to a minimal cytomegalovirus (CMV) promoter. The
reporter constructs can be, but are not necessarily, present on a vector (e.g., plasmid).
[019] In addition, the present invention provides methods of making the reporter
constructs of the invention. The methods include molecular genetic techniques known to the
skilled artisan to be useful for creating and modifying nucleic acids. The methods provide the
reporter constructs of the invention, and are used to optimize directed expression of reporter
genes in the assays of the invention.
[020] The present invention further provides assays for detection of substances that
interact with cell surface receptors. The assays can include exposing a recombinant cell of
the invention to a sample containing at least one substance, and determining whether the
sample activates expression of the recombinant reporter gene, thus indicating that at least one
substance in the sample interacted with the cell surface receptor. The method can further
include purifying, isolating, and/or identifying the substance that interacts with the cell
surface receptor.
[021] Accordingly, the present invention provides kits for performing the assay of
the invention. The kits can, but do not necessarily, include all of the cells, constructs,
reagents, and supplies necessary to detect binding of a substance to a cell surface receptor of interest. The kit can be used, for example, to identify drugs that modulate the activity of G- protein coupled receptor activated metabolic pathways.
BRIEF DESCRIPTION OF THE DRAWINGS
[022] This invention will be more fully described with reference to the drawings in
which:
[023] Figure 1 depicts, generally, construction of a reporter construct of the
invention by inclusion of varying numbers of AP-.1 (TRE) motifs in the promotor region.
[024] A. The first TRE was inserted, using PCR, directly in front of either the
minimal CMV or minimal c-fos promotor.
[025] B. The 9 x TRE constructs were cloned by inserting the oligonucleotides
O5-O8 in front of the first TRE.
[026] C. The 9 x TRE constructs were digested with Sαcl, and 4 TRE were removed
to create the 5 x TRE.
[027] Figure 2 schematically depicts a reporter construct of the invention. The
plasmid pcFUSII was used to establish the stable HeLa reporter cell line, HFl . The construct
contains an EGFP - firefly luciferase chimeric reporter gene, driven by a 9 x TRE CMVmin
promoter to ensure a sufficiently high signal to allow for detection of EGFP after stimulation
of the HeLa host cells. The backbone from the pcDNA3 vector also contains a neomycin
resistance cassette. The designation pA stands for the poly A tail. EGFP stands for the
enhanced green fluorescent protein. [028] Figure 3 shows the influence of the number of TRE, in combination with the
minimal c-fos promotor or the minimal CMV promotor, on the induction of luciferase
activity in two host cell lines.
[029] A. HeLa cells.
[030] B. CHO cells.
[031] Cells electroporated for transient expression were stimulated with 100 nM PMA for 10 hours. Amplification was calculated as the ratio between the relative
luminescence units (RLU) of stimulated and non-stimulated cells. Results are expressed as
mean values + SEM of three to four independent transfection experiments each performed in
triplicate; n.d. = not determined.
[032] Figure 4 show results from FACS analyses. HFlpBLTR cells were stimulated
with 2 x 10"8 M leukotriene B4 and then sorted in a Becton-Dickinson FACS Vantage. Ten percent of the cells that expressed the highest EGFP level were gated and expanded.
[033] A. Unstimulated cells.
[034] B. Stimulated cells, where the arrow indicates the 10% portion of the cells
that were gated and expanded.
[035] Figure 5 illustrates the response of endogenous ATP receptors present in the
HeLa cells used to establish a reporter cell line, HFl, of the invention.
[036] A. Dose-response curve following stimulation with varying concentrations of
ATP for 16 hours. The calculated EC50 value is 1.07 x 10"4 M. Shown are mean values from
a typical experiment performed in quadruplicate. Error bars indicate ± SEM. [037] B. Time-course of the TRE-mediated response of the HFl reporter cells of the
invention, grown in a 96-well format, following stimulation with 10"4 M ATP at the indicated
time points, to induce and report a response mediated by the endogenous ATP receptors
present on the target cells. Shown are mean values from one typical experiment performed in
quadruplicate. Error bars indicate ± SEM.
[038] Figure 6 shows model experiments in which reporter cells of the invention
were tested with three types of receptors activated with ligands representing three widely different families of chemical mediators.
[039] A. A monoamine (epinephrine) was the ligand.
[040] B. A lipid mediator (LTB4) was the ligand.
[041] C. A peptide (having the sequence RANTES) was the ligand.
[042] Dose-response curves are depicted for stimulation of reporter cells expressing
the alpha adrenoceptor, Rαlb (in A), the leukotriene B4 receptor, BLTR (in B), and the
chemokine receptor, CCR5 (in C). Each receptor was stably expressed in the HFl reporter
cells of the invention and stimulated with their respective agonist. The values for the agonist
concentration giving half maximum effect (EC50) in these experiments were: for leukotriene
B4 interacting with BLTR, 4.4 x 10"8 M; for epinephrine interacting with Rαlb, 1.17 x 10"7 M;
and for RANTES interacting with CCR5 , 1.11 x 10"7 M. Shown are mean values from a
typical experiment performed in quadruplicate. Error bars (mostly too small to be visible)
indicate SEM.
[043] Figure 7 shows the results of experiments designed to test whether the levels
of expression of reporter constructs of the invention can be altered with inhibitors. Reporter cells were treated with various compounds (indicated to the right) in a concentration of 1 μM
each 30 minutes before agonist stimulation was started. A typical set of experiments
performed in quadruplicate is shown. Error bars indicate ± SEM. Statistical significance
analysis was performed with Student's t-test.
[044] Figure 8 schematically and generally depicts an assay according to the
invention.
[045] Figure 9 shows the results of reporter construct expression of pcFUSII in S2
insect cells upon treatment with various drugs that influence calcium release.
DETAILED DESCRIPTION OF THE INVENTION
[046] The present invention provides reporter systems for detecting substances that
interact with cell surface receptors or ion channels. The reporter systems utilize recombinant cells expressing a cell surface receptor or ion channel of interest and a reporter gene whose
expression is under the control of at least one molecule produced or otherwise made available
as a result of interaction of the cell surface receptor or ion channel and another molecule (e.g.,
a ligand). The reporter systems of the invention are rapid, reliable, and simple to use. The
reporter systems also provide a clonal selection method that for fast and efficient
establishment of the best responding receptor specific reporter cell lines. The reporter
constructs of the invention are functional in a variety of cell types and with a variety of cell
surface receptors and ion channels, which is an advantage over constructs known in the art.
The ability of the constructs to function in a variety of cell types is advantageous because several cell lines express endogenous receptors or ion channels that will make them unacceptable. Endogenous receptors or channels might interfere either by interacting with
ligands shared by the recombinant test receptor or channel or, when using complex ligand
mixtures, the endogenous receptors or channels might respond in concert with the target
receptor or channel. As used hereinbelow, unless indicated otherwise, "receptor" is used
generally to indicate both receptors and ion channels, and should only be interpreted as
limited to receptors when an interpretation that includes "ion channels" would be
inconsistent with the function of ion channels or with the application in general.
[047] In a first aspect of the invention, nucleic acids comprising reporter constructs
are provided. The nucleic acids can be any nucleic acid that encodes a chimeric gene
according to the invention and that is capable of being expressed in a target cell. Thus, the
nucleic acids of the invention can be RNA or DNA, double-stranded or single-stranded, linear or closed circular, concatameric, and/or supercoiled.
[048] In embodiments, the nucleic acids of the invention comprise constructs and
elements known to the skilled artisan. For example, the nucleic acids can be expression
vectors or shuttle vectors. Examples include, but are not limited to, plasmids; viruses and
viral nucleic acids, including phages and phage nucleic acids; cosmids; phagemids; and
artificial chromosomes, including Bacterial Artificial Chromosomes (BACs) and Yeast
Artificial Chromosomes (YACs). The nucleic acids can be provided as naked nucleic acid or
can be provided as part of a mixture or complex with other molecules that aid in targeting and
delivering nucleic acids to host cells. For example, the nucleic acids can be provided in a
composition that includes liposomes, cell- or tissue-specific antibodies, or cell- or tissue-
specific ligands to increase the uptake of the nucleic acids into the host cells. [049] The reporter constructs of the invention include a chimeric reporter gene that
is operably linked to at least one transcription control element. Transcription control
elements constitute parts of promoters or enhancers where at least one protein or protein
complex can bind. Thus, in embodiments, the chimeric reporter gene is operably linked to a promoter and/or at least one enhancer sequence. A promoter or enhancer, and thus a
transcriptional control element, is operably linked to a coding sequence (for example, a
chimeric reporter gene of the invention) if it participates in regulation of transcription of the
coding sequence. Various transcription control elements are known to those of skill in the
art, and all are applicable to the present invention. Examples of transcription control
elements include, but are not limited to, cAMP responsive elements (CRE) and TPA responsive elements (TRE; AP-1), or any other transcription control element that is involved
in gene transactivation upon stimulation of surface receptors. Other transcription control
elements are disclosed in U.S. Patents 5,401,629 and 5,435,128 to Harpold et al. and U.S.
Patent 5,854,004 to Czernilofsky et al, the disclosures of which are incorporated herein in
their entireties by reference.
[050] In embodiments, the transcription control element is responsive to intracellular
signals that can be generated, either directly or ultimately, as a result of binding of a cell
surface receptor to a ligand. For example, the transcription control element can be responsive
to cyclic adenosine monophosphate (cAMP) or phorbol-12-myristat-13-acetate (TPA).
[051] The reporter constructs include at least one chimeric reporter gene whose
expression is controlled by at least one transcription control element. Expression can be up- regulated or down-regulated in response to an intracellular signalling molecule. Preferably, in the absence of the intracellular signalling molecule, there is little or no detectable expression of the chimeric reporter gene. In embodiments, multiple transcription control elements are operably linked to a single chimeric reporter gene. In these embodiments, the reporter constructs are optimized for high level and stringent expression of the chimeric reporter gene in the chosen host cell. For example, the number and spacing of the transcription control elements present on the construct are optimized to provide high level expression only in the presence of a sufficient amount of the molecule to which the element is responsive. By including multiple copies of a single control element, more than one type of control element, or a combination of the two, the reporter constructs of the present invention can be optimized to minimize background signal and aid in the reliability and sensitivity of the overall system. Examples of transcriptional control elements are AP-1, CRE, and NFAT.
[052] A minimal promoter, though not in itself necessary, constitutes the smallest fragment of a promoter that still has the capacity to direct transcription. The above- mentioned two components (i.e., at least one transcription control element and a minimal promoter) are, in the present context, defined as a "reporter control element". In embodiments, more than one type of reporter control element is operably linked to a single chimeric reporter gene.
[053] The reporter constructs of the invention comprise at least one chimeric reporter gene (also referred to herein as a reporter fusion gene). The chimeric reporter gene comprises the coding sequences for at least two proteins, or functional portions (i.e., fragments) thereof. Suitable reporter genes are those genes whose expression products can be monitored without the need to lyse or otherwise destroy or diminish the viability of the cell in which they are expressed. A "function portion" is a sufficient amount of a coding sequence to encode a protein or polypeptide that has an activity that can be monitored without the need to
lyse or otherwise destroy or diminish the viability of the cell in which it is expressed. In
preferred embodiments, the activity of the fragment is the same activity as that of the full-
length protein from which it is derived. Because the reporter proteins expressed from the
reporter construct are easily detectable, identification of functional portions of the proteins is
a straightforward matter that does not require undue or excessive experimentation.
[054] Suitable reporter genes are known in the art, and include luciferase, antibiotic
resistance, heavy metal resistance, and other genes whose expression can be detected by
luminescence, fluorescence, a chemical reaction that results in a color change of a reagent, or some detectable phenotypic change in the cell into which the gene is introduced. Examples
of reporter genes include, but are not limited to, firefly luciferase, bacterial luciferase, Renilla
luciferase, Photinus luciferase, green fluorescent protein (GFP), the enhanced green
fluorescent protein (EGFP), chloramphenicol acetyl transferase (CAT), alkaline phosphatase,
and β-galactosidase.
[055] The choice of reporter genes used to create the chimeric reporter gene in the
reporter construct can be based on the preference of the worker skilled in the art. Standard
molecular biology techniques, well-known and widely practiced by those of skill in the art,
can be used to create the chimeric reporter gene. For example, restriction endonuclease cleavage and religation can be used to fuse the coding regions of two reporter genes to create a chimeric reporter gene. Where necessary, oligo-directed engineering of restriction endonuclease cleavage sites can be used to ensure cleavage at desired points in the reporter
genes, for example to maintain the proper reading frame in the chimeric reporter gene.
[056] The reporter constructs of the invention can further comprise selection
markers, including, but not limited to, antibiotic resistance genes and heavy metal resistance
genes. Selection markers are well known to those of skill in the art and thus need not be listed in detail here. The selection markers can be useful in preparing large quantities of the
construct for use in the assays of the invention, or can be used, for example, as a selection
marker for recombinant cells of the invention and for maintenance of pure cultures of the
recombinant cells. In addition, the reporter constructs of the invention can comprise an origin
of replication to enhance replication and maintenance of the construct in the host.
[057] The reporter constructs of the invention permit those practicing the invention to create recombinant cells that express a desired level of a reporter gene in response to
activation (or repression) via the reporter control element(s). For example, the reporter
constructs enable the practitioner to maximize the level of expression of the chimeric reporter
gene upon induction by a pre-selected intracellular signalling molecule, such as one known to
be linked to a chosen receptor and/or signal transduction pathway. In embodiments of the
invention, an optimized reporter construct is used in the construction of heptahelix receptor-
based reporter cell lines. In these embodiments, the promoter comprises multiple TRE motifs
fused to a minimal promoter. In embodiments, the reporter construct is pGL3-APlxl FOS. In embodiments, the reporter construct is pGL3.APlx9 FOS. In embodiments, the reporter
construct is pGL3-APlxl CMV. In embodiments, the construct comprises nine TRE motifs, such as in the reporter construct pGL3.APlx9 CMV. In embodiments, the reporter construct is pcFUSII. In yet other embodiments, the reporter construct is pcFUS3. Exemplary reporter constructs are described in more detail in the Examples that follow, and in the Figures. [058] In another aspect, the present invention provides methods of making the reporter constructs of the invention. The methods include molecular genetic techniques known to the skilled artisan to be useful for creating and modifying nucleic acids. The methods provide the reporter constructs of the invention, and are used to optimize directed expression of reporter genes in the assays of the invention. In general, commonly available nucleic acid molecules, such as vectors, are modified by addition of at least one reporter gene and at least one transcription control element such that production of a detectable reporter protein is either enhanced or reduced as the result of binding of a signalling molecule (e.g., a transcription factor) to the transcription control element. Multiple copies of a single transcription control element can be operably linked to a single reporter gene. In addition, multiple types of reporter control elements can be operably linked to a single reporter gene. Furthermore, a mixture of different numbers and types of control elements can be operably linked to a single reporter gene. The selection of reporter control element(s), as well as the
number of copies of each, should be optimized to provide the highest level of expression of the reporter gene in the host cell. In addition, it is preferable that, under conditions where expression is not desired, the level of expression is at, near, or below, the level of detection. The reporter construct is optimal for various cell types, but the total signal and the signal-to- noise background ratio may differ for the individual cell type containing the construct of the invention. The signal-to-noise ratio may be improved by introducing into the cells one or more recombinant genes coding for necessary components in the signal transduction pathway being utilized. Optimizing the number of reporter control elements for the chosen cell is a routine, straightforward matter that can be accomplished rapidly by those of skill in the art.
[059] In another aspect, the present invention provides recombinant cells. The
recombinant cells of the invention contain the reporter constructs of the invention. The
recombinant cells can express at least one reporter gene present on the reporter construct. Expression of the reporter gene is regulated by at least one transcription control element that
is responsive, ultimately, to interaction of a cell surface receptor and a ligand. Expression of
the reporter gene can either be up-regulated or down-regulated in response to interaction
between the cell surface receptor and the ligand. In embodiments, expression of the reporter
gene is up-regulated in response to the interaction of the cell surface receptor and the ligand. The ligand can be any substance or microorganism that interacts with the cell surface
receptor, including, but not limited to, drugs, prodrugs, and viruses. The substance, or ligand,
can be organic or inorganic.
[060] In embodiments, the recombinant cells of the invention express the reporter
gene at high levels when the cells are exposed to a substance (e.g., a ligand) that interacts
with a cell surface receptor, but do not express it to any appreciable level in the absence of a
substance that interacts with the cell surface receptor. In these embodiments, the cell surface
receptor can be, but is not limited to, a G-protein coupled receptor, a tyrosine kinase-type
receptor, or an ion channel receptor.
[061] Thus, in addition to containing the reporter constructs, the recombinant cells express at least one cell surface receptor. The cell surface receptor can be expressed from an endogenous gene (i.e., a gene that was not introduced into the cell using molecular biology technology) or recombinantly (i.e., as a result of introduction of a gene into the host cell by molecular biology technology): In embodiments, expression of a gene naturally present in the genome of the host cell can be augmented by introduction, via molecular biology technology, additional copies of the gene, resulting in a recombinant cell. Thus, the cell surface receptor gene can be present in the recombinant cell in single, double, or multiple copies, and can exist genomically (i.e., in the host chromosome), extrachromosomally, or both. In embodiments, the cell surface receptor is expressed from a gene present on the reporter gene construct. In embodiments, the cell surface receptor is expressed from a gene present on a construct that is separate from the reporter gene construct. In embodiments, expression of the cell surface receptor is unregulated (i.e., it is constitutively expressed), while in other embodiments, expression of the cell surface receptor is regulated.
[062] In embodiments, the cell surface receptor is a G-protein coupled receptor. In embodiments, the cell surface receptor is an ion channel receptor. In embodiments, the cell surface receptor is a tyrosine kinase-type receptor. Preferably, the receptor, or a majority of the receptor that is expressed, is localized to the cell surface. Examples of G-protein coupled
receptors include, but are not limited to, the leukotriene B4 receptor (BLTR), the chemokine receptors CCR5 and CXCR4, the alphalb adrenoceptor, and the C5a receptor.
[063] In embodiments, especially embodiments where a non-endogenous cell surface receptor is expressed, the recombinant cell does not naturally transfer the signal produced by the cell surface receptor to the transcription control element because one or more members of the signalling pathway are absent or function poorly. In these embodiments, the absent or poorly functioning pathway member(s) can be provided to the cell as a recombinant "helper" protein(s). The recombinant helper protein(s) can be expressed from the reporter construct or from separate expression vector(s). In addition, they can be expressed from vectors that have integrated into the host cell genome.
[064] In a further aspect, the present invention provides a method of making a recombinant cell. The method can include transforming, transfecting, or otherwise introducing a reporter construct of the invention into a suitable host cell to create a recombinant cell. Techniques for transforming, transfecting, or otherwise introducing nucleic acids, viruses, etc. into eukaryotic cells are known to those of skill in the art. Any suitable technique can be used so long as it does not result in unacceptable alteration of the reporter construct, other vectors (when used to co-express other genes), or the host cell. Unacceptable alterations include alterations that render the nucleic acids and cells unsuitable for their intended purposes.
[065] In embodiments, the method additionally includes transforming, transfecting, or otherwise introducing a heterologous nucleic acid that encodes a cell surface receptor, such as a G-protein coupled receptor, into the host cell. Introduction of the heterologous nucleic acid encoding the cell surface receptor can be accomplished before, at the same time, or preferably after, introduction of the reporter construct into the host cell. In embodiments, the gene encoding the cell surface receptor is present on the reporter construct. In other embodiments, the gene encoding the cell surface receptor is present on a separate nucleic acid construct.
[066] The method can include preparing a stable recombinant cell that expresses heterologous proteins of interest from genes that are integrated into the host cell's genome. Alternatively, the method can include preparing a stable recombinant cell that expresses heterologous proteins of interest from genes that are not integrated into the host cell's genome (e.g., from genes present on an Epstein-Barr viral vector). The method can also include
preparing a transiently transformed recombinant cell that expresses at least one heterologous gene that is present in the recombinant as an extra-genomic element, such as a plasmid. The invention provides a method for quick selection of the best expressing recombinant clones. Techniques for preparation of stably- and transiently-transfected cells are known to those of skill in the art. Generally, cells constituting the system are the progeny of a single ancestral transformant. Recombinant expression systems as defined herein will express heterologous protein upon induction of the regulatory elements linked to the DNA sequence or synthetic gene to be expressed.
[067] The recombinant cells can be cell lines, and can be mammalian or non- mammalian. In embodiments, mammalian cell surface receptors are recombinantly expressed in insect cells. In general, because many mammalian transcription control elements are active in other eukaryotic cells, such as insect (e.g., Spodopterafrugiperda ovarian (Sf9, Sf21) cells) and other non-mammalian (e.g., yeast, nematode) cells, it is possible to use mammalian reporter constructs and recombinant cell receptors in such cells. For example, AP-1 elements from mammalian cells, which are responsive to, among other things, intracellular calcium levels, can also function in insect cells if a receptor system is in place that mobilizes calcium.
[068] An additional aspect of the invention is an assay for detection of substances that interact with cell surface receptors. Broadly, the principle of the assay of the invention is depicted in Figure 8. In general, the assay includes exposing a recombinant cell of the invention (including a culture of the cell) to a sample and determining whether expression of
a reporter gene present on the reporter construct is altered. Alteration (i.e., up- or down-
regulation) indicates that the sample contains at least one substance that can interact with a
receptor present on the surface of the recombinant cell. Alteration in reporter gene expression is easily assayed using reagents, protocols, and equipment widely known and available to
those in the art. For example, many commercial vendors sell systems for expression and
detection of a signal from luciferase, CAT, β-galactosidase, and alkaline phosphatase. Other systems, though not commercially available, are known to the skilled artisan, and can be used
in accordance with the present invention.
[069] The assay can be performed with intact or lysed cells in any suitable volume of
culture media. In preferred embodiments, the assay is performed in microtiter plates, such as
a 96 well or 384 well plate. In these embodiments, some or all of the wells of the microtiter
plate contain a culture of the recombinant cell of the invention. Each culture can be exposed
to a sample containing the same or different substances. Thus, the same microtiter plate can
be used to assay multiple substances for their ability to interact with a selected cell surface
receptor. In addition, a sample can be assayed multiple times using multiple wells in a single
microtiter plate to verify its activity or lack thereof. In all instances, the signal is related to
that obtained in confrol cells lacking a recombinant test receptor.
[070] The assay of the invention can be a high-throughput assay that can be used to screen large numbers of substances or mixtures of substances that interact with a chosen cell
surface receptor. For example, in embodiments of the invention, a recombinant cell
expressing a cell surface receptor of the superfamily of G-protein coupled receptors interacts with a substance, which causes the receptor to generate a signal that subsequently activates the reporter gene on the reporter construct. The level of expression of the reporter gene product is monitored by the appropriate techniques (fluorescence, luminescence, color change).
[071] In embodiments, the method of assaying for substances that interact with cell surface receptors further includes purifying, isolating, and/or identifying the substance that interacts with the cell surface receptor. In these embodiments, techniques known to the skilled artisan can be used to purify and/or isolate the substance(s). Such techniques include, but are not necessarily limited to, precipitation, filtration (including size-exclusion chromatography), liquid chromatography, paper chromatography, centrifugation, affinity chromatography, and solvent extraction.
[072] The reporter system of the invention can include clonal selection of the recombinant cells. Thus, in embodiments, the method of making a cell according to the invention includes clonal selection of the cells. Accordingly, in embodiments, the assay of the invention includes, prior to screening for molecules that affect the activity of a cell surface receptor, clonal selection to obtain efficiently expressing cells. Clonal selection can be carried out using any techniques known to those of skill in the art. For example, it can be carried out using fluorescent analytical cell sorting (FACS), during illumination (activation) with UV light in a low-power operation microscope. Thus, the present assay avoids much of the time and labor required in the assays known in the art. The present system permits identification of well-responding cells in a fraction of the time that is necessary in other assays. As a consequence, the signal-to-noise ratio of the present assay is higher than other assays.
[073] Clonal selection can be used advantageously in the construction of reporter
cell lines and in practice of the assay of the invention. Often, the sensitivity of the final cell
line can be substantially increased. The presence of a chimeric reporter gene in the construct
according to the invention also allows for clonal selection by FACS or by ocular identification of the colonies with fluorescence microscopy. Thus, in an embodiment, a
construct having a chimeric reporter gene that comprises EGFP fused in frame to Photinus
luciferase is provided.
[074] In another aspect of the invention, kits are provided. In embodiments, the kits
are μsed to perform the assay of the invention (i.e., to identify samples that contain substances
that interact with a specific cell surface receptor, or to detect such substances). The kit can,
but does not necessarily, include all of the cells, constructs, reagents, and supplies necessary
to detect binding of a substance to a cell surface receptor of interest. The kit can be used, for
example, to identify drugs that modulate the activity of G-protein coupled receptor activated
metabolic pathways. It can also be used, for example, to detect proteins or small molecules
that interact with ion channels.
EXAMPLES
[075] The invention will now be further described with reference to examples of
embodiments of the invention. The following examples are meant to more fully illustrate certain embodiments of the invention and are not to be construed as limiting the scope of the invention.
[076] Example 1 : Construction of a Reporter Plasmid [077] Construction of a reporter plasmid according to the invention is depicted generally in Figure 1. In particular, the plasmid, pGL3basic (Promega), was used as a backbone for the reporter construct according to the invention. Primers and oligonucleotides used in the invention are shown in Table 1, in which consensus TRE motifs are shown in bold type, and restriction endonuclease sites are underlined.
Table 1
[078] The minimal CMV promoter was amplified with primers PI and P2, while the
c-fos promoter was amplified by PCR using primers P3 and P4 and pc-FOS (ATCC 41042)
as a template. The upper primer sequences contained one TRE each. This TRE was inserted at -54 position relative to the transcription start (minimal c-fos promoter) and at -51 position
(minimal CMV promoter). The PCR fragments were digested with Bgllϊ, HindUl (minimal
CMV promoter), and Sad, Hindϊlϊ (minimal c-fos promoter), respectively. The fragments
were inserted in the appropriately digested vector. This resulted in the plasmids, pGL3-APxl
FOS and pGL3-APxlCMV, respectively. The plasmids were linearized with Sαcl and the 8 x
TRE box (corresponding to oligonucleotides 05- O8) was inserted. This resulted in the
plasmids ρGL3-APx9 FOS and ρGL3-APx9 CMV. By inserting the 8 x TRE box into the
vector, the Sαcl site of the vector was destroyed and new Sαcl sites were introduced with
oligonucleotides O5 and 06. In order to obtain the 5 x TRE constructs, the Sαcl fragment
containing 4 x TRE was removed and the plasmids re-ligated (Figure 1). The primers and
oligonucleotides were designed by the inventors and custom-synthesized at Gibco BRL.
[079] Example 2: Construction of a Chimeric Reporter Gene
[080] The plasmid, pEGFP-1 (Clontech), was used as template in a PCR reaction
with the primers P5 and P6 to amplify the enhanced green fluorescent protein (EGFP). The
product was cut with Ncol and BspBI and inserted in front of the luciferase gene into the Ncol
site of pGL3-APx9 CMV to get the plasmid pFUSII. The stop codon at the end of EGFP was thereby removed, giving rise to a fusion protein between EGFP and firefly luciferase. The
plasmid, pFUSII, was digested with BamΗI and Kpnl, and the fragment containing the complete reporter construct was ligated into the backbone of the pcDNA3 plasmid between
the BgtlϊlKpnl sites, thereby replacing the CMV promoter in pcDNA3. The resulting
plasmid, pcFUSII, contains the reporter construct and a neomycin resistance cassette (Figure 2; SEQ ID NO: 11).
[081] Example 3: Construction of Receptor Plasmids
[082] Three prototypic receptors were tested in the reporter system. All receptor
ORFs were inserted into the pIRESpuro vector (Clontech) by standard techniques. The alpha adrenergic receptor, Rαlb cDNA was a kind gift from Dr. Robert Lefkowitz (see Lomasney et
al, Journal of Biological Chemistry, 266:6365-6369, 1991), the chemokine receptor, CCR5,
was cloned by the inventors from a human monocyte cDNA by PCR and sequenced, and the
cDNA encoding the human leukotriene B4 receptor, BLTR, had earlier been cloned in our
laboratory (Owman et al, Genomics, 37:187-194, 1996; Owman et al, Biochemical and
Biophysical Research Communications, 240:162-166, 1997).
[083] Example 4: Selection of Reporter Cell Lines
[084] Cell Culture
[085] HeLa and CHO cells were grown in Dulbecco's modified Eagle's medium
(DMEM) with Glutamax I, supplemented with 10% fetal bovine serum, 0.5% streptomycin
and penicillin at 37°C and 7% CO2. [086] Transfection
[087] HeLa and CHO cells were electroporated essentially as described by methods
known to the art (see Rols et al, Nucleic Acids Research, 22:540, 1994). Briefly, by using a
ElecfroSquarePorator T820 (Genetronics; BTX), 5xl06 cells were pulsed in electroporation
buffer (lOrnM phosphate buffer, 250mM sucrose, 1 mM MgCl2, pH 7.2) in a 4-mm gap
cuvette 15 times for 3 msec with 150 V. Before pulsing, cells were mixed with 6-10
micrograms of plasmid and incubated 10 min on ice. The cells were kept for 10 min at 37°C
after electroporation. In stimulation experiments following transient expression, cells from
one transfection were split into 6 wells of a 24-well plate.
[088] Cells grown in 15 cm diameter dishes were electroporated with 9 micrograms
of linearized plasmid to establish stable HeLa cell lines. After 2 days, the medium was
supplemented with lμg/ml G418 or lμg/ml puromycin, respectively. The medium was
renewed every second day for two weeks.
[089] Ocular Selection Procedure
[090] After approximately 2 weeks, 50 to 200 colonies per plate had grown up. For
the selection of HF reporter cell lines, the medium was supplemented with 100 nM PMA for
about 16 h. Colonies were checked under UV light using an Olympus inverted microscope
with appropriate fluorescence filters. Green colonies were picked with a pipette, expanded,
and tested as reporter cell lines. The different receptors were stably transfected by
electroporation and selected for puromycin (lμg/ml) resistant clones. Clones were picked,
expanded, and analyzed for their capability to activate the reporter gene after receptor stimulation with the appropriate agonist. This procedure gave rise to HFlpBLTR cells,
HFlpRαlb cells, and HFlpCCR5 cells.
[091] FA CS Selection Procedure
[092] A FACS Vantage machine from Becton-Dickinson was used. HFl cells and HFlpBLTR cells were grown in 6-well plates. Cells were stimulated with 3xl0"4 M ATP or
2xl0"8 M LTB4, respectively, 16 h prior FACS. The cells were trypsinized, washed three
times with 10 ml PBS without magnesium and calcium, and suspended in PBS containing
lmM EDTA at 500,000 cells per ml lh before FACS. From HFl cells two pools were then
sorted out: 100,000 cells representing 20% of the population and 40,000 cells representing
5% of the best responding cells, respectively. HFlpBLTR cells (100,000 cells representing
10% of the best cells) were sorted out. The best responding cells are defined as cells
containing most EGFP. These pools were grown up, cultured for 2 weeks in parallel with the
mother cell lines, and then used in ligand stimulation experiments as described.
[093] Example 5: Luciferase Assay and Stimulation Experiments
[094] Luciferase Assay
[095] Cells transiently transfected with the various promoter constructs were
stimulated 24 h after transfection with 100 nM PMA for 10 h in 24- well plates. The medium
was then removed, cells were washed once with PBS, and 100 microliters reporter lysis
buffer (Promega) were added per well. The plates were stored until analysis, usually
overnight at -20°C. Luciferase assays were performed with Luciferase Assay Kit (Biothema, Sweden) according to the manufacturer's instruction. Transiently transfected cells were
analyzed in a Turner TD-20e luminometer. Luciferase assay for stably transfected clones was
carried out with a BMG Lumistar luminometer in 96-well plate format. White, clear-bottom
plates of tissue culture quality (Costar) were used. Approximately 10,000- 20,000 cells were
grown per well in 90 μl medium. After 3 days, ligands were added in 10 μl PBS and
incubated for further 16 h. The medium was removed and cell lysis buffer added. Plates were stored at -70 °C until further analysis. All experiments were performed two to four
times in quadruplicate.
[096] Fluorescence Analysis in 96-Well Plate Reader
[097] The fluorescence measurements were performed in a BMG Fluostar
fluorometer in black plates with clear bottom (Costar). Cells cultured and stimulated as
above were assayed in 100 μl PBS. After fluorescence measurement, the PBS was removed
and the luciferase activity determined as described above.
[098] Inhibitors
[099] HF 1 , HF lpBLTR, and HF lpRαlb cells were grown in 96-well plates as
described. The respective inhibitor was added to the cells at 1 μM concentration 30 min
before stimulation with the respective agonist. Luciferase assay was performed after 16 h.
[100] Calculations
[101] All calculations were performed in the GraphPad prism computer program. [102] Example 6: Modification of pcFUSII for optimization in Insect Cell Lines
[103] Plasmid pcFUSII was modified for use in insect cells by replacing the SV40
promoter of the neomycin resistance gene with the baculo virus IE-1 promoter from the
plasmid pIEl-3 (Novagen). This was done by digesting pcFUSII with EcόRHAflQ. and blunting the Aflϊ site. An EcoRI/Smal fragment from pIEl-3, containing the IE1 promoter,
was then ligated into this site, thus resulting in the plasmid pcFUSLT-iE (SEQ ID NO: 12).
[104] Example 7: G-Protein Chimeric Construction
[105] Because not all of the native insect G-proteins are able to efficiently transduce
the signal from a mammalian receptor, some of the reporter systems that are based on insect
cells were also made to contain a G-protein expression unit. This unit is composed of a
constitutive, i.e., unregulated, promoter that controls the transcription of either a mammalian
Gα or a chimeric Gα subunit. This expression unit is then inserted into the basic reporter
construction (Figure 2). The chimeric G-protein is based on the gene of an insect Gα subunit
(dGαq3), where the last five amino acids have been replaced with the last five amino acids of
either the human Gαi2 or Gα16 subunit. This was accomplished by the polymerase chain reaction (PCR) using the primers described in Table 2 and the gene for dGq-3 (Talluri S., et
al, PNAS, 92:11475-11479, 1995) as a template. Table 2
[106] The template was amplified for 10 cycles (20 sec at 95 °C, 30 sec at 55 °C and
2 min at 72 °C) with Pwo polymerase and 2mM MgSO4. The product was digested with
BgUUNotl and was subsequently ligated into pIEl-3. The resulting plasmid was digested
with EcoRI and HindBI and blunted. The expression cassette, containing the IΕ1 promoter
and the chimeric G-protein, was purified and ligated into a filled-in Bsml site of the pcFUSII-
IΕ reporter vector.
[107] Example 8: Inhibition of reporter constructs
[108] The ability of the reporter constructs of the invention to be inhibited by chosen inhibitors was tested. Figure 7 shows the results of these experiments. The graphs show a
reporter cell line of the invention, HFl, expressing no recombinant receptor, HFlpRαIb
reporter cells expressing the alpha-adrenergic test receptor, and HFlpBLTR reporter cells
expressing the leukotriene B4 test receptor. Each cell was exposed to a) agonist only
(control), b) UO126, c) DHBP, or d) GF109203X, as described below.
[109] The HFl cells were first stimulated with ATP (at the maximum concentration
illustrated in Figure 3) to activate the endogenous ATP receptors, then the cells expressing recombinant receptors (HFlpBLTR and HFlpRalb) were stimulated with their respective
agonist (at the maximum concentration illustrated in Figure 4A and 4B, respectively). The
reporter cells were treated with the compounds (indicated to the right) in a concentration of
lμM each at 30 min before the agonist stimulation was started, in order to inhibit different
signal transduction pathways. Luciferase activity in cells treated with agonist only (control)
was taken as 100%. A typical set of experiments performed in quadruplicate is shown. Error
bars indicate ± SEM. Statistical significance analysis was performed with Student's t-test.
[110] The results indicate that various compounds can be used to inhibit the
expression of reporter constructs of the invention. This result further indicates that the
systems of the invention can not only be used to identify compounds or molecules that
positively affect the level of signal generated by the reporter constructs and reporter cells of
the invention, but that the system can be used to identify compounds or molecules that
negatively affect the level of signal. Furthermore, this result shows that compounds can be
added to the system to regulate the intensity of signals generated by the reporter constructs
and cells. That is, inhibitor compounds or molecules can be added to the assay of the
invention, in amounts chosen by the artisan practicing the invention, to adjust the intensity of
the signal, such that a desired level of signal is produced by the assay.
[Ill] Example 9: Reporter systems based on insect cell lines
[112] Test of the reporter construct pcFUSII in insect cells
[113] In order to test if the reporter construct pcFUSII is activated in insect cells
upon calcium mobilization, the construct was transfected transiently into S2 cells. The transfected cells were then treated with drugs that influence calcium release. It was found
that treatment with Thapsigargin (500 nM) or Staurosporine (500 nM) activated the reporter gene by a 5 - 10 fold increase (Figure 9). Considering previous experience with mammalian
reporter systems, these results indicate that the pcFUSII construct can be used as a reporter vector in insect cells.
[114] Test of the aequorin based reporter system in insect cell lines
[115] In order to test the usefulness of this reporter system in insect cells, the pIE 1 -
aequorin expression plasmid was co-transfected with expression vectors for the rat αlb and
the CCR5 receptors into Sf9 cells. It was found that the rat αlb receptor was able to
transduce calcium mobilization in Sf9 cells using the endogenous G-proteins of the insect
cells. CCR5, on the other hand, was able to mobilize calcium only if it was co-transfected
with an expression vector that expresses the gene for the human Gα16 subunit. Thus, because
the present invention provides recombinant cells comprising not only a chimeric reporter
construct linked to a human cell surface receptor, but a heterologous human signal
transduction pathway as well, the system can be used in a variety of cells using a variety of
cell surface receptors.
[116] Example 10: Construction of a promoter containing a mixture of different
types of control elements. [117] Construction of the plasmid pcFUS2-6xSTAT/NFκB was achieved by ligation
of the oligonucleotides O9 (5' TTTCCGGGAAATTCCCTTTCCGGGAAATTCCCTTTC CGGGAAATTCCCGGATCC 3'; SEQ ID NO: 16) and OlO (5' GGGAATTTCCCGGAAAG GGAATTTCCCGGAAAGGGAATTTCCCGGAAA 3'; SEQ ID NO:17), in two copies each,
into the EcoRV digested pcFUS2 vector. The KprillXhol fragment containing the
6xSTAT/NFκB-cassette was excised and ligated to the^TzoI restricted pGL3-basic plasmid
(PROMΕGA) to get pGL3-12xSTAT/NFκB. The reporter plasmid pcFUS3 was constructed
by replacing the KpnllHindlll promoter fragment of pcFUS2-6xSTAT/NFκB with the
KpnVHindHl promoter fragment of pGL3-9xAP-l FOS instead. The sequence of the promoter of pcFUS3, containing the XhόllHindlll fragment containing the 6xSTAT NFκB
and the 9xAP-l cassette is disclosed herein as SΕQ ID NO:18.
[118] Example 11: Characterization of mammalian reporter cell lines transfected
withpcFUS3
[119] The reporter vector pcFUS3 was stably electroporated into HeLa cells by
standard techmques known in the art. Three hundred twenty stable cell clones were screened
by the Ocular Selection Procedure and twenty clones reconfirmed twice with the luciferase
assay procedure after PMA or ATP stimulation (as described in Examples 4 and 5). Five of
the clones performed superior to HFl cells in all tests performed. The cell clone most
suitable for the purpose was named HFF11 and was used as an exemplary clone for further
study.
[120] Endogenously expressed receptors in the HFF11 cells were stimulated with the
respective ligands known to the art. The results obtained by stimulating the endogenously expressed receptor CXCR4, with SDF-1 or endogenously expressed ATP-receptors with ATP showed an increased signal-to-noise ratio in respect to HFl cells by a factor of two to three.
[121] HFF11 cells were used to establish cell lines stably expressing the human
CCR5 or the human receptor for C5a (C5aR). After maximal agonist stimulation luciferase activity increased about 80 times in cells transfected with CCR5 and about 30 times in cells
transfected with the C5aR stimulated with a C5a C-terminal peptide (BACHEM H-3462).
[122] Example 12: Characterization of mammalian cell lines transiently
transfected with reporter constructs
[123] The prototypic reporter plasmids (ρcFUS2; pcFUS2-6xSTAT/NFκB; pcFUS3
and pGL3-12xSTAT/NFκB) were used to transfect HeLa cells transiently by electroporation.
Cells were stimulated 24 h post transfection with lOOnM PMA or lOOnM PMA and 10"6 M
thapsigargin or treated as controls. After 10 h of incubation, the cells were lysed and assayed.
The Amplification values are shown in Table 3.
TABLE 3
[124] The invention has been described in detail above with reference to prefened embodiments. However, it will be understood by the ordinary artisan that various modifications and variations can be made in the practice of the present invention without departing from the scope or spirit of the invention. All references cited herein are hereby incorporated by reference in their entirety.

Claims (21)

What is claimed is:
1. A reporter construct comprising a chimeric reporter gene operably linked to at
least one transcription control element, wherein said chimeric reporter gene comprises coding sequences from two different genes fused in frame such that each of said coding sequences
produces a gene product that is detectable without the need to lyse or otherwise destroy or diminish the viability of the cell in which they are expressed.
2. The reporter construct of claim 1 , wherein the chimeric reporter gene
comprises coding sequences from a gene encoding a fluorescent protein and coding sequences
from a gene encoding a protein that luminesces.
3. The reporter construct of claim 1 , wherein the chimeric reporter gene
comprises coding sequences from a luciferase gene, an antibiotic resistance gene, a heavy
metal resistance gene, or coding sequences from two of these genes.
4. The reporter construct of claim 1 , wherein the chimeric reporter gene
comprises coding sequences from the firefly luciferase gene, the bacterial luciferase gene, the
Renilla luciferase gene, the Photinus luciferase gene, the green fluorescent protein (GFP)
gene, the enhanced green fluorescent protein (EGFP) gene, the chloramphenicol acetyl
transferase (CAT) gene, the alkaline phosphatase gene, the β-galactosidase gene, or coding
sequences from two of these genes.
5. The reporter construct of claim 1, wherein the construct is a plasmid, a virus, a viral nucleic acid, a cosmid, a phagemid, or an artificial chromosome.
6. The reporter construct of claim 1 , wherein the chimeric reporter gene
comprises sequences from the gene encoding the enhanced green fluorescent protein (EGFP) and the gene encoding the Photinus luciferase.
7. The reporter construct of claim 1 , wherein said at least one transcription
control element comprises a second messenger-responsive element.
8. The reporter construct of claim 1, wherein said at least one transcription
confrol element is a cAMP responsive element (CRE), a TPA responsive element (TRE; AP-
1), an NFAT responsive element, or a mixture of these three elements.
9. The reporter construct of claim 1 , wherein said at least one transcription control element is responsive to infracellular signals that can be generated, either directly or
ultimately, as a result of binding of a cell surface receptor to a ligand.
10. The reporter construct of claim 9, wherein said at least one transcription
control element is responsive to cyclic adenosine monophosphate (cAMP) or phorbol-12-
myristate-13-acetate (TPA).
11. The reporter construct of claim 1 , wherein said at least one transcriptional control element comprises multiple TRE motifs fused to a minimal promoter.
12. A recombinant cell comprising
a) a reporter construct comprising a chimeric reporter gene operably linked to at least
one transcription control element, wherein said chimeric reporter gene comprises coding
sequences from two different genes fused in frame such that each of said coding sequences
produces a gene product that is detectable without the need to lyse or otherwise destroy or diminish the viability of the cell in which they are expressed, and
b) a cell surface receptor or ion channel,
wherein interaction of the cell surface receptor or ion channel with a substance that
specifically interacts with the receptor or channel modifies the level of expression of the
reporter gene.
13. The recombinant cell of claim 12, wherein the cell is a mammalian cell or an
insect cell.
14. The recombinant cell of claim 12, wherein the cell comprises a cell surface
receptor that is a heptahelix receptor.
15. The recombinant cell of claim 12, wherein the cell is present as a component
of a kit.
16. A process for detecting a substance that specifically interacts with a cell- surface receptor protein or ion channel, said process comprising: a) providing a recombinant cell comprising
i) a reporter construct comprising a chimeric reporter gene operably linked to
at least one transcription control element, wherein said chimeric reporter gene comprises coding sequences from two different genes fused in frame such that each of said coding
sequences produces a gene product that is detectable without the need to lyse or otherwise
destroy or diminish the viability of the cell in which they are expressed, and
ii) a cell surface receptor or ion channel, wherein said cell surface receptor or
ion channel is expressed on the surface of the recombinant cell
wherein specific interaction of the cell surface receptor or ion channel with a
substance modifies the level of expression of the reporter gene,
b) exposing the recombinant cell to a sample containing at least one substance
suspected of being capable of specifically interacting with said cell surface receptor or ion
channel, and c) determining whether expression of the chimeric reporter gene is altered, wherein alteration of reporter gene expression indicates interaction of a
substance in the sample with the cell surface receptor or ion channel, and thus the presence of
a substance in the sample that specifically interacts with said cell-surface receptor or ion
channel.
17. The process of claim 16, wherein the cell surface receptor is a heptahelix receptor.
18. The process of claim 16, wherein alteration of gene expression is an increase in gene expression.
19. The process of claim 16, wherein said chimeric reporter gene comprises sequences from the gene encoding the enhanced green fluorescent protein (EGFP) and the
gene encoding the Photinus luciferase.
20. The process of claim 19, wherein providing a recombinant cell comprises clonal selection by detection of a signal due to the EGFP.
21. The process of claim 20, wherein Fluorescence Activated Cell Sorting (FACS) or fluorescence microscopy is used to detect the signal.
AU2001294120A 2000-09-07 2001-09-06 Chimeric reporter system for cell surface receptor-ligand binding Abandoned AU2001294120A1 (en)

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