AU2001275192A1 - Determination of nucleotide sequence variations through limited primer extension - Google Patents

Determination of nucleotide sequence variations through limited primer extension

Info

Publication number
AU2001275192A1
AU2001275192A1 AU2001275192A AU7519201A AU2001275192A1 AU 2001275192 A1 AU2001275192 A1 AU 2001275192A1 AU 2001275192 A AU2001275192 A AU 2001275192A AU 7519201 A AU7519201 A AU 7519201A AU 2001275192 A1 AU2001275192 A1 AU 2001275192A1
Authority
AU
Australia
Prior art keywords
determination
nucleotide sequence
primer extension
sequence variations
limited primer
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2001275192A
Inventor
Alexander N Glazer
Hua Xu
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
DNA Sciences Inc
Original Assignee
DNA Sciences Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by DNA Sciences Inc filed Critical DNA Sciences Inc
Publication of AU2001275192A1 publication Critical patent/AU2001275192A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6858—Allele-specific amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2001275192A 2000-06-02 2001-05-31 Determination of nucleotide sequence variations through limited primer extension Abandoned AU2001275192A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09586125 2000-06-02
US09/586,125 US6355433B1 (en) 2000-06-02 2000-06-02 Determination of nucleotide sequence variations through limited primer extension
PCT/US2001/018023 WO2001092583A1 (en) 2000-06-02 2001-05-31 Determination of nucleotide sequence variations through limited primer extension

Publications (1)

Publication Number Publication Date
AU2001275192A1 true AU2001275192A1 (en) 2001-12-11

Family

ID=24344410

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2001275192A Abandoned AU2001275192A1 (en) 2000-06-02 2001-05-31 Determination of nucleotide sequence variations through limited primer extension

Country Status (5)

Country Link
US (1) US6355433B1 (en)
EP (1) EP1287166A1 (en)
JP (1) JP2003534812A (en)
AU (1) AU2001275192A1 (en)
WO (1) WO2001092583A1 (en)

Families Citing this family (20)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020081294A1 (en) * 1996-01-23 2002-06-27 Genentech, Inc. Co-administration of a thrombolytic and an anti-CD18 antibody in stroke
US20030104421A1 (en) * 2001-05-07 2003-06-05 Colangelo Christopher M. Methods and compositions for nucleic acid amplification
US9261460B2 (en) 2002-03-12 2016-02-16 Enzo Life Sciences, Inc. Real-time nucleic acid detection processes and compositions
US7776524B2 (en) * 2002-02-15 2010-08-17 Genzyme Corporation Methods for analysis of molecular events
US9353405B2 (en) * 2002-03-12 2016-05-31 Enzo Life Sciences, Inc. Optimized real time nucleic acid detection processes
US20050181394A1 (en) * 2003-06-20 2005-08-18 Illumina, Inc. Methods and compositions for whole genome amplification and genotyping
US20040259100A1 (en) * 2003-06-20 2004-12-23 Illumina, Inc. Methods and compositions for whole genome amplification and genotyping
EP1636337A4 (en) 2003-06-20 2007-07-04 Illumina Inc Methods and compositions for whole genome amplification and genotyping
EP1664077B1 (en) 2003-09-05 2016-04-13 Trustees of Boston University Method for non-invasive prenatal diagnosis
WO2005089508A2 (en) * 2004-03-18 2005-09-29 Atom Sciences, Inc. Dna sequence detection by limited primer extension
WO2005111244A2 (en) * 2004-05-10 2005-11-24 Exact Sciences Corporation Methods for detecting a mutant nucleic acid
US7981607B2 (en) * 2004-08-27 2011-07-19 Esoterix Genetic Laboratories LLC Method for detecting recombinant event
US9109256B2 (en) 2004-10-27 2015-08-18 Esoterix Genetic Laboratories, Llc Method for monitoring disease progression or recurrence
US9777314B2 (en) * 2005-04-21 2017-10-03 Esoterix Genetic Laboratories, Llc Analysis of heterogeneous nucleic acid samples
JP2009545314A (en) * 2006-08-03 2009-12-24 ナショナル ユニヴァーシティー オブ シンガポール Nucleic acid multiplex analysis method
CN102337345B (en) * 2011-11-04 2013-04-17 四川大学 Medicolegal composite assay kit based on twenty triallelic SNP (single nucleotide polymorphism) genetic markers
EP2780467B1 (en) 2011-11-14 2018-10-17 Alfasigma S.p.A. Assays and methods for selecting a treatment regimen for a subject with depression and methods for treatment
GB2497766A (en) * 2011-12-20 2013-06-26 Gene Onyx Ltd Snp analysis to determine efficacy of skin care product
US20160186263A1 (en) 2013-05-09 2016-06-30 Trustees Of Boston University Using plexin-a4 as a biomarker and therapeutic target for alzheimer's disease
US9789087B2 (en) 2015-08-03 2017-10-17 Thomas Jefferson University PAR4 inhibitor therapy for patients with PAR4 polymorphism

Family Cites Families (41)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB8311018D0 (en) 1983-04-22 1983-05-25 Amersham Int Plc Detecting mutations in dna
US5171534A (en) 1984-01-16 1992-12-15 California Institute Of Technology Automated DNA sequencing technique
US5821058A (en) 1984-01-16 1998-10-13 California Institute Of Technology Automated DNA sequencing technique
US4863849A (en) 1985-07-18 1989-09-05 New York Medical College Automatable process for sequencing nucleotide
CA1273552A (en) 1985-12-23 1990-09-04 Michael J. Heller Fluorescent stokes shift probes for polynucleotide hybridization assays
US4962037A (en) 1987-10-07 1990-10-09 United States Of America Method for rapid base sequencing in DNA and RNA
US5639611A (en) 1988-12-12 1997-06-17 City Of Hope Allele specific polymerase chain reaction
US5856092A (en) 1989-02-13 1999-01-05 Geneco Pty Ltd Detection of a nucleic acid sequence or a change therein
SG50434A1 (en) 1989-02-13 1998-07-20 Geneco Pty Ltd Detection of a nucleic acid sequence or a change therein
GB8910880D0 (en) 1989-05-11 1989-06-28 Amersham Int Plc Sequencing method
US5547839A (en) 1989-06-07 1996-08-20 Affymax Technologies N.V. Sequencing of surface immobilized polymers utilizing microflourescence detection
FR2650840B1 (en) 1989-08-11 1991-11-29 Bertin & Cie RAPID DETECTION AND / OR IDENTIFICATION OF A SINGLE BASED ON A NUCLEIC ACID SEQUENCE, AND ITS APPLICATIONS
US5302509A (en) 1989-08-14 1994-04-12 Beckman Instruments, Inc. Method for sequencing polynucleotides
US5219727A (en) 1989-08-21 1993-06-15 Hoffmann-Laroche Inc. Quantitation of nucleic acids using the polymerase chain reaction
US5137806A (en) 1989-12-11 1992-08-11 Board Of Regents, The University Of Texas System Methods and compositions for the detection of sequences in selected DNA molecules
IL97222A (en) 1990-02-16 1995-08-31 Orion Yhtymae Oy Method and reagent for determining specific nucleotide variations
US6013431A (en) 1990-02-16 2000-01-11 Molecular Tool, Inc. Method for determining specific nucleotide variations by primer extension in the presence of mixture of labeled nucleotides and terminators
US5210015A (en) 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5846710A (en) 1990-11-02 1998-12-08 St. Louis University Method for the detection of genetic diseases and gene sequence variations by single nucleotide primer extension
IE66125B1 (en) 1991-01-31 1995-12-13 Zeneca Ltd Detection method for variant nucleotides
US5888819A (en) 1991-03-05 1999-03-30 Molecular Tool, Inc. Method for determining nucleotide identity through primer extension
US5518900A (en) 1993-01-15 1996-05-21 Molecular Tool, Inc. Method for generating single-stranded DNA molecules
US6004744A (en) 1991-03-05 1999-12-21 Molecular Tool, Inc. Method for determining nucleotide identity through extension of immobilized primer
WO1992016657A1 (en) 1991-03-13 1992-10-01 E.I. Du Pont De Nemours And Company Method of identifying a nucleotide present at a defined position in a nucleic acid
WO1993005183A1 (en) 1991-09-09 1993-03-18 Baylor College Of Medicine Method and device for rapid dna or rna sequencing determination by a base addition sequencing scheme
JPH06509946A (en) 1992-06-17 1994-11-10 シティ・オブ・ホープ How to detect and identify nucleic acids
US5710028A (en) 1992-07-02 1998-01-20 Eyal; Nurit Method of quick screening and identification of specific DNA sequences by single nucleotide primer extension and kits therefor
EP0601889A2 (en) 1992-12-10 1994-06-15 Maine Medical Center Research Institute Nucleic acid probes
WO1995008642A1 (en) 1993-09-23 1995-03-30 Zeneca Limited Nucleic acid detection with energy transfer
US5538848A (en) 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
US5654419A (en) 1994-02-01 1997-08-05 The Regents Of The University Of California Fluorescent labels and their use in separations
US5891629A (en) 1995-09-28 1999-04-06 Ambion, Inc. Compositions for improving RNase cleavage of base pair mismatches in double-stranded nucleic acids
US5981186A (en) 1995-06-30 1999-11-09 Visible Genetics, Inc. Method and apparatus for DNA-sequencing using reduced number of sequencing mixtures
US5728528A (en) 1995-09-20 1998-03-17 The Regents Of The University Of California Universal spacer/energy transfer dyes
JP3439221B2 (en) 1995-12-18 2003-08-25 ワシントン ユニヴァーシティ Nucleic acid analysis method using fluorescence resonance energy transfer
US6027890A (en) * 1996-01-23 2000-02-22 Rapigene, Inc. Methods and compositions for enhancing sensitivity in the analysis of biological-based assays
US5866336A (en) 1996-07-16 1999-02-02 Oncor, Inc. Nucleic acid amplification oligonucleotides with molecular energy transfer labels and methods based thereon
US5853992A (en) 1996-10-04 1998-12-29 The Regents Of The University Of California Cyanine dyes with high-absorbance cross section as donor chromophores in energy transfer labels
US5885775A (en) 1996-10-04 1999-03-23 Perseptive Biosystems, Inc. Methods for determining sequences information in polynucleotides using mass spectrometry
US5863736A (en) 1997-05-23 1999-01-26 Becton, Dickinson And Company Method, apparatus and computer program products for determining quantities of nucleic acid sequences in samples
JP2002508664A (en) 1997-06-25 2002-03-19 オーキッド・バイオサイエンシーズ・インコーポレイテッド Method for detecting multiple single nucleotide polymorphisms in a single reaction

Also Published As

Publication number Publication date
US6355433B1 (en) 2002-03-12
EP1287166A1 (en) 2003-03-05
JP2003534812A (en) 2003-11-25
WO2001092583A1 (en) 2001-12-06

Similar Documents

Publication Publication Date Title
AU2001275192A1 (en) Determination of nucleotide sequence variations through limited primer extension
AU2001238030A1 (en) Detection of single nucleotide polymorphisms
AU2001279134A1 (en) Nucleotide incorporating enzymes
AU2001241733A1 (en) Methods for determining single nucleotide variations
AU2002341900A1 (en) Detection of dna hybridization on surfaces
AU2002233540A1 (en) Allele-specific primer extension assay
AU2001262606A1 (en) Semi-solid primer compositions
AU2001242625A1 (en) Gene sequence
AU2001246703A1 (en) Dna immunization vectors
EP1298175A4 (en) Primer composition
AU2001259595A1 (en) Haplotypes of the crybb1 gene
AU2002213416A1 (en) Detecting specific nucleotide sequences
AUPR282501A0 (en) Expression facilitating nucleotides
AU2002251686A1 (en) Haplotypes of the CYP27B1 gene
AU2002228636A1 (en) Haplotypes of the plau gene
AUPR867101A0 (en) Munitions
AU2001290603A1 (en) Haplotypes of the or11a1 gene
AUPQ998800A0 (en) Nucleotide sequences
AU2001264967A1 (en) Haplotypes of the gpr3 gene
AU2001294586A1 (en) Haplotypes of the htr5a gene
AU2001257050A1 (en) Haplotypes of the zfp36 gene
AU2002213185A1 (en) Haplotypes of the chrm5 gene
AU2002227177A1 (en) Haplotypes of the scya21 gene
AU2001274995A1 (en) Haplotypes of the rlbp1 gene
AU2001292815A1 (en) Haplotypes of the scya8 gene