AU2001242124A1 - Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays - Google Patents
Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arraysInfo
- Publication number
- AU2001242124A1 AU2001242124A1 AU2001242124A AU4212401A AU2001242124A1 AU 2001242124 A1 AU2001242124 A1 AU 2001242124A1 AU 2001242124 A AU2001242124 A AU 2001242124A AU 4212401 A AU4212401 A AU 4212401A AU 2001242124 A1 AU2001242124 A1 AU 2001242124A1
- Authority
- AU
- Australia
- Prior art keywords
- organisms
- arrays
- biological
- micro
- identification
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP00870055 | 2000-03-24 | ||
EP00870055A EP1136566A1 (en) | 2000-03-24 | 2000-03-24 | Method and kit for detection and/or quantification of homologus nucleotide sequences on arrays |
EP00870204 | 2000-09-15 | ||
EP00870204 | 2000-09-15 | ||
PCT/BE2001/000053 WO2001077372A2 (en) | 2000-03-24 | 2001-03-26 | Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays |
Publications (1)
Publication Number | Publication Date |
---|---|
AU2001242124A1 true AU2001242124A1 (en) | 2001-10-23 |
Family
ID=26074232
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AU2001242124A Abandoned AU2001242124A1 (en) | 2000-03-24 | 2001-03-26 | Identification of biological (micro) organisms by detection of their homologous nucleotide sequences on arrays |
Country Status (5)
Country | Link |
---|---|
US (1) | US7205104B2 (en) |
EP (1) | EP1266034A2 (en) |
JP (1) | JP2003530116A (en) |
AU (1) | AU2001242124A1 (en) |
WO (1) | WO2001077372A2 (en) |
Families Citing this family (49)
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US20060281112A1 (en) * | 2000-03-24 | 2006-12-14 | Jose Remacle | Design of capture molecules for the detection of amplicons with high sensitivity |
US7875442B2 (en) | 2000-03-24 | 2011-01-25 | Eppendorf Array Technologies | Identification and quantification of a plurality of biological (micro)organisms or their components |
US7829313B2 (en) | 2000-03-24 | 2010-11-09 | Eppendorf Array Technologies | Identification and quantification of a plurality of biological (micro)organisms or their components |
US20080085515A1 (en) * | 2000-03-24 | 2008-04-10 | Eppendorf Array Technologies Sa (Eat) | Identification of multiple biological (micro) organisms by detection of their nucleotide sequences on arrays |
US8288128B2 (en) | 2004-11-18 | 2012-10-16 | Eppendorf Array Technologies S.A. | Real-time quantification of multiple targets on a micro-array |
EP1164201A1 (en) * | 2000-06-14 | 2001-12-19 | Facultés Universitaires Notre-Dame de la Paix | Reverse detection for identification and/or quantification of nucleotide target sequences on biochips |
EP1260592A1 (en) * | 2001-05-17 | 2002-11-27 | MWG -Biotech AG | Biochip |
CA2348042A1 (en) | 2001-06-04 | 2002-12-04 | Ann Huletsky | Sequences for detection and identification of methicillin-resistant staphylococcus aureus |
WO2003046221A1 (en) * | 2001-11-26 | 2003-06-05 | Institut Molekulyarnoi Biologii Im.V.A.Engelgardta Rossiiskoi Akademii Nauk | Method for the specific identification of orthopoxvirus with the aid of a miniature biological chip. |
JP2004041109A (en) * | 2002-07-12 | 2004-02-12 | Toshiba Corp | Method for detecting nucleic acid and primer for use in the method |
EP1586639A4 (en) * | 2002-07-26 | 2007-09-19 | Toshiba Kk | Nucleic acid probe immobilization support and method of detecting target nucleic acid using the same |
AU2004265570B2 (en) * | 2003-05-13 | 2009-01-08 | Gen-Probe Incorporated | Method and kit for identifying antibiotic-resistant microorganisms |
FR2860801B1 (en) * | 2003-10-10 | 2007-09-21 | Bertin Technologies Sa | METHOD FOR RAPID DETECTION OF MICROORGANISMS ON DNA CHIPS |
EP2202322A1 (en) * | 2003-10-31 | 2010-06-30 | AB Advanced Genetic Analysis Corporation | Methods for producing a paired tag from a nucleic acid sequence and methods of use thereof |
CN1914322B (en) * | 2003-12-05 | 2012-05-30 | 扶桑药品工业株式会社 | Cell expansion lethal toxin and detection of bacterium belonging to campylobacter genus that targets the same |
FI115637B (en) * | 2003-12-19 | 2005-06-15 | Mobidiag Oy | Diagnostic Method for Detection and Identification of Bacteria Causing Respiratory Infections and Primer Mixture for Use in the Method |
EP1713911A4 (en) * | 2003-12-25 | 2008-02-20 | Kenmoku Takashi | Probe set and method for identifying hla allele |
US7338763B2 (en) * | 2004-06-02 | 2008-03-04 | Eppendorf Array Technologies S.A. | Method and kit for the detection and/or quantification of homologous nucleotide sequences on arrays |
AU2005335216A1 (en) * | 2004-10-05 | 2007-02-15 | Wyeth | Probe arrays for detecting multiple strains of different species |
EP1529849A3 (en) * | 2004-10-06 | 2005-11-02 | De Ceuster NV | Reliable method for assessing and reporting the risks of disease, contamination and losses caused by one or more microorganisms in a matrix or environment |
EP1704258B1 (en) | 2004-11-18 | 2010-09-22 | Eppendorf Array Technologies | Real-time pcr of targets on a micro-array |
US20080293057A1 (en) * | 2005-05-17 | 2008-11-27 | Eppendorf Array Technologies S.A. | Detection of unspecified genetically modified organism (gmo) on micro-arrays |
EP1724360A1 (en) * | 2005-05-17 | 2006-11-22 | Eppendorf Array Technologies S.A. | Identification and/or quantification method of nucleotide sequence(s) elements specific of genetically modified plants on arrays |
EP1736780A1 (en) | 2005-06-24 | 2006-12-27 | Eppendorf Array Technologies S.A. | Method and means for detecting and/or quantifying hierarchical molecular change of a cell in response to an external stimulus |
ATE389035T1 (en) | 2005-09-13 | 2008-03-15 | Eppendorf Array Tech Sa | METHOD FOR DETECTING HOMOLOGOUS SEQUENCES THAT DIFFER BY A BASE ON A MICROARRAY |
US11834720B2 (en) | 2005-10-11 | 2023-12-05 | Geneohm Sciences, Inc. | Sequences for detection and identification of methicillin-resistant Staphylococcus aureus (MRSA) of MREJ types xi to xx |
DE602006021269D1 (en) * | 2005-11-18 | 2011-05-26 | Eppendorf Array Tech Sa | Reaction vessel for real-time PCR comprising oligonucleotide samples wherein the amplification products are measured by hybridization and without opening the reaction vessel |
WO2007132001A1 (en) * | 2006-05-17 | 2007-11-22 | Eppendorf Array Technologies S.A. | Design of capture molecules for the detection of amplicons with high sensitivity |
US11098345B2 (en) | 2006-06-05 | 2021-08-24 | California Institute Of Technology | Methods for detecting target analytes |
WO2008014485A2 (en) | 2006-07-28 | 2008-01-31 | California Institute Of Technology | Multiplex q-pcr arrays |
US11525156B2 (en) | 2006-07-28 | 2022-12-13 | California Institute Of Technology | Multiplex Q-PCR arrays |
US11560588B2 (en) | 2006-08-24 | 2023-01-24 | California Institute Of Technology | Multiplex Q-PCR arrays |
AU2008292946B2 (en) | 2007-08-24 | 2014-06-05 | Fuso Pharmaceutical Industries, Ltd. | Detection of bacteria belonging to the genus Campylobacter by targeting cytolethal distending toxin |
EP2192184B8 (en) | 2007-08-31 | 2017-11-08 | Osaka Prefecture University | Detection of bacterium belonging to genus campylobacter which targets cytolethal distending toxin |
EP2077337A1 (en) | 2007-12-26 | 2009-07-08 | Eppendorf Array Technologies SA | Amplification and detection composition, method and kit |
WO2009089384A1 (en) | 2008-01-09 | 2009-07-16 | Life Technologies | Method of making a paired tag library for nucleic acid sequencing |
WO2012044847A1 (en) | 2010-10-01 | 2012-04-05 | Life Technologies Corporation | Nucleic acid adaptors and uses thereof |
KR101072899B1 (en) * | 2008-01-21 | 2011-10-17 | 주식회사 파나진 | Synthesis of peptide nucleic acids conjugated with amino acids and their application |
EP2107125A1 (en) | 2008-03-31 | 2009-10-07 | Eppendorf Array Technologies SA (EAT) | Real-time PCR of targets on a micro-array |
US20100323910A1 (en) * | 2009-01-30 | 2010-12-23 | Baker Hughes Incorporated | DNA Microarray for Quantitative Detection of Microbial Processes in the Oilfield |
EP2369325A1 (en) | 2010-03-12 | 2011-09-28 | Eppendorf Ag | Array analysis for online detection |
WO2013059204A1 (en) | 2011-10-21 | 2013-04-25 | Boston Scientific Scimed, Inc. | Locking catheter hub |
CN104024410A (en) * | 2011-12-28 | 2014-09-03 | 凸版印刷株式会社 | Method for determining HLA-A*24 group |
AU2017223821B2 (en) * | 2016-02-23 | 2023-07-27 | Arc Bio, Llc | Methods and compositions for target detection |
WO2017155858A1 (en) | 2016-03-07 | 2017-09-14 | Insilixa, Inc. | Nucleic acid sequence identification using solid-phase cyclic single base extension |
EP3610043A1 (en) | 2017-04-12 | 2020-02-19 | Saudi Arabian Oil Company | Biochips and rapid methods for detecting organisms involved in microbially influenced corrosion (mic) |
BR112021026672A2 (en) * | 2019-07-19 | 2022-02-15 | Safeguard Biosystems Holdings Ltd | Detection of genomic sequences using combinations of probes, probe molecules and arrays comprising the probes for the specific detection of organisms |
KR20230134556A (en) * | 2021-01-20 | 2023-09-21 | 세이프가드 바이오시스템스 홀딩스 엘티디. | Improved detection of genomic sequences and probe molecules therefor |
WO2022157248A1 (en) * | 2021-01-20 | 2022-07-28 | Safeguard Biosystems Holdings Ltd | Improved detection of genomic sequences and probe molecules therefor |
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AU632494B2 (en) | 1988-05-20 | 1993-01-07 | F. Hoffmann-La Roche Ag | Immobilized sequence-specific probes |
US5800992A (en) * | 1989-06-07 | 1998-09-01 | Fodor; Stephen P.A. | Method of detecting nucleic acids |
US5143854A (en) | 1989-06-07 | 1992-09-01 | Affymax Technologies N.V. | Large scale photolithographic solid phase synthesis of polypeptides and receptor binding screening thereof |
RU1794088C (en) | 1991-03-18 | 1993-02-07 | Институт Молекулярной Биологии Ан@ Ссср | Method of dna nucleotide sequence determination and a device for its realization |
EP0511559A1 (en) | 1991-04-30 | 1992-11-04 | F.Hoffmann-La Roche & Co. Aktiengesellschaft | Oligonucleotide probe reagent |
EP0656065A1 (en) | 1991-10-31 | 1995-06-07 | University Of Pittsburgh | Reverse dot blot hybridization using tandem head-to-tail monomers containing probes synthesized by staggered complementary primers |
EP0540997A1 (en) * | 1991-11-05 | 1993-05-12 | F. Hoffmann-La Roche Ag | Methods and reagents for HLA class I DNA typing |
US5981179A (en) | 1991-11-14 | 1999-11-09 | Digene Diagnostics, Inc. | Continuous amplification reaction |
US5405940A (en) * | 1992-08-31 | 1995-04-11 | Ludwig Institute For Cancer Research | Isolated nonapeptides derived from MAGE genes and uses thereof |
WO1994005695A1 (en) * | 1992-09-10 | 1994-03-17 | New York University | Polypeptides of g-coupled receptor proteins, and compositions and methods thereof |
US5312527A (en) | 1992-10-06 | 1994-05-17 | Concordia University | Voltammetric sequence-selective sensor for target polynucleotide sequences |
US6255059B1 (en) * | 1993-03-31 | 2001-07-03 | Cadus Pharmaceutical Corporation | Methods for identifying G protein coupled receptor effectors |
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RU2041261C1 (en) * | 1993-08-11 | 1995-08-09 | Институт молекулярной биологии им.В.А.Энгельгардта РАН | Method for manufacturing of matrix for detecting of mismatches |
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US5807522A (en) * | 1994-06-17 | 1998-09-15 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for fabricating microarrays of biological samples |
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US6770441B2 (en) * | 2000-02-10 | 2004-08-03 | Illumina, Inc. | Array compositions and methods of making same |
US7202026B2 (en) * | 2000-03-24 | 2007-04-10 | Eppendorf Array Technologies Sa (Eat) | Identification of a large number of biological (micro)organisms groups at different levels by their detection on a same array |
EP1472021A4 (en) * | 2002-01-11 | 2008-04-16 | David R Whitlock | Compositions including ammonia oxidizing bacteria and methods of using same |
US20060003308A1 (en) * | 2004-05-12 | 2006-01-05 | Bio-Rad Laboratories, Inc. | Electrocompetent cells prepackaged for electroporation |
-
2001
- 2001-03-23 US US09/817,014 patent/US7205104B2/en not_active Expired - Fee Related
- 2001-03-26 JP JP2001575226A patent/JP2003530116A/en active Pending
- 2001-03-26 AU AU2001242124A patent/AU2001242124A1/en not_active Abandoned
- 2001-03-26 WO PCT/BE2001/000053 patent/WO2001077372A2/en active Application Filing
- 2001-03-26 EP EP01914852A patent/EP1266034A2/en not_active Withdrawn
Also Published As
Publication number | Publication date |
---|---|
JP2003530116A (en) | 2003-10-14 |
US7205104B2 (en) | 2007-04-17 |
WO2001077372A3 (en) | 2002-06-13 |
US20020106646A1 (en) | 2002-08-08 |
EP1266034A2 (en) | 2002-12-18 |
WO2001077372A2 (en) | 2001-10-18 |
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