AU1915000A - Methods for identifying and classifying organisms by mass spectrometry and database searching - Google Patents

Methods for identifying and classifying organisms by mass spectrometry and database searching

Info

Publication number
AU1915000A
AU1915000A AU19150/00A AU1915000A AU1915000A AU 1915000 A AU1915000 A AU 1915000A AU 19150/00 A AU19150/00 A AU 19150/00A AU 1915000 A AU1915000 A AU 1915000A AU 1915000 A AU1915000 A AU 1915000A
Authority
AU
Australia
Prior art keywords
identifying
methods
mass spectrometry
database searching
classifying organisms
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU19150/00A
Inventor
Plamen A. Demirev
Catherine Fenseleau
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of Maryland at Baltimore
Original Assignee
University of Maryland at Baltimore
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of Maryland at Baltimore filed Critical University of Maryland at Baltimore
Publication of AU1915000A publication Critical patent/AU1915000A/en
Abandoned legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biophysics (AREA)
  • Theoretical Computer Science (AREA)
  • Medical Informatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
AU19150/00A 1998-11-17 1999-11-17 Methods for identifying and classifying organisms by mass spectrometry and database searching Abandoned AU1915000A (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US10869698P 1998-11-17 1998-11-17
US60108696 1998-11-17
US12067999P 1999-02-19 1999-02-19
US60120679 1999-02-19
PCT/US1999/027191 WO2000029987A1 (en) 1998-11-17 1999-11-17 Methods for identifying and classifying organisms by mass spectrometry and database searching

Publications (1)

Publication Number Publication Date
AU1915000A true AU1915000A (en) 2000-06-05

Family

ID=26806169

Family Applications (1)

Application Number Title Priority Date Filing Date
AU19150/00A Abandoned AU1915000A (en) 1998-11-17 1999-11-17 Methods for identifying and classifying organisms by mass spectrometry and database searching

Country Status (2)

Country Link
AU (1) AU1915000A (en)
WO (1) WO2000029987A1 (en)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6977723B2 (en) 2000-01-07 2005-12-20 Transform Pharmaceuticals, Inc. Apparatus and method for high-throughput preparation and spectroscopic classification and characterization of compositions
US7108970B2 (en) 2000-01-07 2006-09-19 Transform Pharmaceuticals, Inc. Rapid identification of conditions, compounds, or compositions that inhibit, prevent, induce, modify, or reverse transitions of physical state
US6680203B2 (en) 2000-07-10 2004-01-20 Esperion Therapeutics, Inc. Fourier transform mass spectrometry of complex biological samples
DE10038694C2 (en) * 2000-07-28 2003-09-25 Anagnostec Ges Fuer Analytisch Process for the identification of microorganisms using MALDI-TOF-MS
CA2320549A1 (en) * 2000-09-25 2002-03-25 Eastern Virginia Medical College Biomarkers of transitional cell carcinoma of the bladder
US6800449B1 (en) 2001-07-13 2004-10-05 Syngenta Participations Ag High throughput functional proteomics
US7133864B2 (en) 2001-08-23 2006-11-07 Syngenta Participations Ag System and method for accessing biological data
GB2387439A (en) * 2002-03-01 2003-10-15 Univ Montfort Yeast identification using mass spectrometry
DE10300743A1 (en) 2003-01-07 2004-07-29 AnagnosTec, Gesellschaft für Analytische Biochemie und Diagnostik mbH Method of identifying microorganisms using mass spectrometry
CN100364355C (en) * 2004-07-29 2008-01-23 大唐移动通信设备有限公司 Method for obtaining sector coverage by using tiled measured data
CA2593184A1 (en) 2005-01-06 2006-07-13 Eastern Virginia Medical School Apolipoprotein a-ii isoform as a biomarker for prostate cancer
WO2011123479A1 (en) * 2010-03-29 2011-10-06 Academia Sinica Quantitative measurement of nano / micro particle endocytosis with cell mass spectrometry
EP2439536A1 (en) * 2010-10-01 2012-04-11 Nederlandse Organisatie voor toegepast- natuurwetenschappelijk onderzoek TNO New classification method for spectral data
CA2833454C (en) * 2011-04-21 2020-03-10 Biomerieux Inc. Method of detecting at least one mechanism of resistance to cephalosporins by mass spectrometry
EP3193174B1 (en) * 2016-01-14 2018-11-07 Thermo Finnigan LLC Methods for top-down multiplexed mass spectral analysis of mixtures of proteins or polypeptides

Family Cites Families (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5809212A (en) * 1993-07-12 1998-09-15 New York University Conditional transition networks and computational processes for use interactive computer-based systems
US5538897A (en) * 1994-03-14 1996-07-23 University Of Washington Use of mass spectrometry fragmentation patterns of peptides to identify amino acid sequences in databases
US5869240A (en) * 1995-05-19 1999-02-09 Perseptive Biosystems, Inc. Methods and apparatus for sequencing polymers with a statistical certainty using mass spectrometry
US5930803A (en) * 1997-04-30 1999-07-27 Silicon Graphics, Inc. Method, system, and computer program product for visualizing an evidence classifier
US5977890A (en) * 1997-06-12 1999-11-02 International Business Machines Corporation Method and apparatus for data compression utilizing efficient pattern discovery
US5930784A (en) * 1997-08-21 1999-07-27 Sandia Corporation Method of locating related items in a geometric space for data mining
US5987470A (en) * 1997-08-21 1999-11-16 Sandia Corporation Method of data mining including determining multidimensional coordinates of each item using a predetermined scalar similarity value for each item pair
US5986652A (en) * 1997-10-21 1999-11-16 International Business Machines Corporation Method for editing an object wherein steps for creating the object are preserved

Also Published As

Publication number Publication date
WO2000029987A1 (en) 2000-05-25

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase