AR107215A1 - METHODS AND SYSTEMS FOR INTRODUCTION OF THE RISK - Google Patents

METHODS AND SYSTEMS FOR INTRODUCTION OF THE RISK

Info

Publication number
AR107215A1
AR107215A1 ARP160103418A ARP160103418A AR107215A1 AR 107215 A1 AR107215 A1 AR 107215A1 AR P160103418 A ARP160103418 A AR P160103418A AR P160103418 A ARP160103418 A AR P160103418A AR 107215 A1 AR107215 A1 AR 107215A1
Authority
AR
Argentina
Prior art keywords
methods
systems
snp database
plants
introduction
Prior art date
Application number
ARP160103418A
Other languages
Spanish (es)
Inventor
Yi Jia
Rebecca W Aus
James Bing
Steve Rounsley
Jenelle Meyer
Jennifer Tang
Clive Evans
Tyler Mansfield
Cherie Ochsenfeld
Jennifer Hamilton
Pradeep Marri
Original Assignee
Dow Agrosciences Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Dow Agrosciences Llc filed Critical Dow Agrosciences Llc
Publication of AR107215A1 publication Critical patent/AR107215A1/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks

Landscapes

  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Physiology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)

Abstract

Se proporcionan métodos y/o sistemas que tienen ventajas de costo eficaz, ahorro de tiempo, y características informativas fáciles de usar para llevar a cabo la conversión de una cría endogámica en una planta con rasgos sin perder el rendimiento agronómico. Los métodos proporcionados comprenden la obtención de una base de datos de SNP, el análisis de las secuencias contra dicha base de datos de SNP, y el pronóstico del resultado entre las plantas que no son biológicamente inferiores y las plantas que son biológicamente inferiores. Los sistemas proporcionados contienen una base de datos de SNP, un Módulo de Imputación de Genotipo, y un Módulo del Administrador del Estudio del Marcador. Los métodos y/o sistemas proporcionados permitirán a los usuarios calcular una medida estadística más realista para asegurar conversiones de alta calidad.Methods and / or systems are provided that have advantages of cost effective, time saving, and easy-to-use informative features to carry out the conversion of an inbred offspring into a plant with traits without losing agronomic performance. The methods provided include obtaining an SNP database, analyzing the sequences against said SNP database, and predicting the outcome between plants that are not biologically inferior and plants that are biologically inferior. The systems provided contain a SNP database, a Genotype Imputation Module, and a Marker Study Manager Module. The methods and / or systems provided will allow users to calculate a more realistic statistical measure to ensure high quality conversions.

ARP160103418A 2015-11-10 2016-11-10 METHODS AND SYSTEMS FOR INTRODUCTION OF THE RISK AR107215A1 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US201562253347P 2015-11-10 2015-11-10

Publications (1)

Publication Number Publication Date
AR107215A1 true AR107215A1 (en) 2018-04-11

Family

ID=58695924

Family Applications (1)

Application Number Title Priority Date Filing Date
ARP160103418A AR107215A1 (en) 2015-11-10 2016-11-10 METHODS AND SYSTEMS FOR INTRODUCTION OF THE RISK

Country Status (5)

Country Link
EP (1) EP3373726A1 (en)
CN (1) CN108135144A (en)
AR (1) AR107215A1 (en)
BR (1) BR102016025738A2 (en)
WO (1) WO2017083091A1 (en)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20080228699A1 (en) 2007-03-16 2008-09-18 Expanse Networks, Inc. Creation of Attribute Combination Databases
US10777302B2 (en) * 2012-06-04 2020-09-15 23Andme, Inc. Identifying variants of interest by imputation
CN112514790B (en) * 2020-11-27 2022-04-01 上海师范大学 Rice molecular navigation breeding method and application

Also Published As

Publication number Publication date
EP3373726A1 (en) 2018-09-19
CN108135144A (en) 2018-06-08
BR102016025738A2 (en) 2017-08-08
WO2017083091A1 (en) 2017-05-18

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