WO2024000223A1 - Modified viral envelope protein and use thereof - Google Patents

Modified viral envelope protein and use thereof Download PDF

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WO2024000223A1
WO2024000223A1 PCT/CN2022/102194 CN2022102194W WO2024000223A1 WO 2024000223 A1 WO2024000223 A1 WO 2024000223A1 CN 2022102194 W CN2022102194 W CN 2022102194W WO 2024000223 A1 WO2024000223 A1 WO 2024000223A1
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cells
virus
nucleic acid
particles
interest
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PCT/CN2022/102194
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French (fr)
Chinese (zh)
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蔡珍珍
唐国发
欧阳学农
葛均友
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成都科伦精准生物科技有限公司
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Priority to PCT/CN2022/102194 priority Critical patent/WO2024000223A1/en
Publication of WO2024000223A1 publication Critical patent/WO2024000223A1/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/02Immunomodulators
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P7/00Drugs for disorders of the blood or the extracellular fluid
    • A61P7/06Antianaemics
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • C07K14/08RNA viruses
    • C07K14/15Retroviridae, e.g. bovine leukaemia virus, feline leukaemia virus human T-cell leukaemia-lymphoma virus
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/62DNA sequences coding for fusion proteins
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
    • C12N15/86Viral vectors
    • C12N15/867Retroviral vectors
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/10Cells modified by introduction of foreign genetic material

Definitions

  • This application relates to the field of biomedicine, specifically to a modified viral envelope protein, and pseudotyped virus-like particles containing the modified viral envelope protein.
  • the modified viral envelope protein can enhance pseudotyping.
  • the infection efficiency of virus-like particles on immune cells e.g., B cells, T cells, NK cells.
  • the present application relates to the use of the engineered viral envelope proteins and the use of the pseudotyped virus-like particles.
  • NK cells Natural killer cells
  • NK cells are a unique group of lymphocytes in the human body that can recognize and destroy virus-infected cells or cancerous cells (also known as tumor cells).
  • NK cells When NK cells come into contact with tumor cells, they can directly kill tumor cells in an MHC-independent manner, and at the same time produce and secrete related cytokines to promote killing functions and recruit other immune cells in the body to jointly play an anti-tumor role.
  • cytokines virus-infected cells or cancerous cells
  • CAR-T T cells expressing chimeric antigen receptor
  • CAR-NK cells are a good substitute for CAR-T cells (Elizabeth L Siegler et al., 2018).
  • genetic modification of primary NK cells faces significant technical challenges (Klingemann et al., 2014).
  • transfection methods such as electroporation and lipofection can achieve effective target gene delivery, but the expression of the target gene is transient and cannot be used in clinical applications.
  • electroporation and transfection can cause higher cell death (Tae Kyung Kim, 2010).
  • viral vector-based transduction can be an option for persistent genetic modification of NK cells.
  • Retrovirus can achieve transduction of primary NK cells, but the transduction efficiency is low and requires a high virus titer (Stephan Müller, 2020).
  • retroviral vectors contain heterologous envelope proteins from foreign viral species within the retroviral membrane. Safety issues such as insertional mutations of retroviral vectors limit their clinical application.
  • lentiviral vectors are currently reported to be less genetically toxic and widely used in clinical applications, such as the application of CAR-T (Sara Ghorashian et al., 2019).
  • CAR-T Sara Ghorashian et al.
  • lentiviral vectors have high transduction efficiency on primary T cells, they have poor transduction efficiency on primary NK cells, and only 10% of NK can be transduced even with higher lentiviral titers. cells, which may be related to the natural antiviral mechanism of NK cells (Sutlu et al., 2012).
  • the use of higher titers of lentivirus will cause certain toxic side effects on NK cells themselves, resulting in a decrease in NK cell viability. Therefore, there is an urgent need to develop viral vectors that can stably transduce NK cells and sustain expression.
  • WO2013/045639A1 a method of transducing quiescent HSCs as well as quiescent T and B cells using viral vectors pseudotyped with modified baboon endogenous retrovirus (BaEV) envelope glycoproteins is disclosed.
  • viral vectors pseudotyped with BaEV envelope glycoprotein significantly improved the transduction efficiency in HSCs.
  • a viral vector pseudotyped with modified baboon endogenous retrovirus (BaEV) envelope glycoprotein was disclosed.
  • primary NK cells can Achieve higher efficiency transduction.
  • this modified baboon endogenous retrovirus (BaEV) envelope glycoprotein pseudotyped viral vector lacks the inhibitory R peptide, causing the viral envelope to produce severe cytotoxicity to packaging cells. , it is especially easy to produce syncytia, which is not conducive to the large-scale production of virus particles (Hélio A. Tottle et al., 2019).
  • the modified viral envelope protein improves the infection efficiency of pseudotyped virus-like particles on immune cells (eg, B cells, T cells, NK cells).
  • immune cells eg, B cells, T cells, NK cells.
  • Such pseudotyped virus-like particles are particularly useful, for example, for the efficient introduction of exogenous nucleic acids of interest (eg, exogenous nucleic acids encoding chimeric antigen receptors (CARs)) into cells (especially immune cells, e.g. B cells, T cells, NK cells), and allow them to express the product encoded by the target exogenous nucleic acid (such as chimeric antigen receptor (CAR)).
  • CARs chimeric antigen receptor
  • a modified viral envelope protein which includes the transmembrane domain and extracellular structure of the baboon endogenous virus (BaEV) envelope glycoprotein. domain, and a modified cytoplasmic tail domain comprising amino acids 1-13 of the cytoplasmic tail domain of murine leukemia virus (MLV) envelope glycoprotein residues, the cleavage sequence of the lentiviral protease, and the fusion inhibitory R peptide.
  • BaEV baboon endogenous virus
  • MMV murine leukemia virus
  • the BaEV envelope glycoprotein includes the wild type of BaEV envelope glycoprotein or has at least 85%, preferably at least 90%, more preferably at least 95%, still more preferably at least 99% of the wild type BaEV envelope glycoprotein.
  • Identity mutants of the wild-type BaEV envelope glycoprotein, the mutant glycoprotein retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
  • the engineered cytoplasmic tail domain is composed of amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein, a cleavage sequence of a lentiviral protease, and a fusion inhibitory R peptide composition.
  • the lentiviral protease is selected from the group consisting of proteases of human immunodeficiency virus HIV (eg, HIV-1, HIV-2). In certain embodiments, the lentiviral protease is HIV-1 protease.
  • the cleavage sequence of the lentiviral protease is a natural HIV-1 protease cleavage sequence or a synthetic HIV-1 protease cleavage sequence.
  • the lentiviral protease is able to cleave polyproteins such as Gag and Gag-Pro-Pol at the site it recognizes, thereby converting unique morphologically immature virions into mature viruses.
  • the cleavage sequences of natural lentiviral proteases e.g., HIV-1 protease
  • the cleavage sequences of natural lentiviral proteases are divided into two types: cleavage sequences with aromatic residues and proline residues. ; and, a cleavage sequence having hydrophobic residues but excluding proline residues.
  • lentiviral protease cleavage sequences can be used, including natural HIV-1 protease cleavage sequences, as well as artificially designed or artificially synthesized lentiviral proteases (e.g., HIV-1 protease ) cleavage sequence.
  • the cleavage sequence of the lentiviral protease is a cleavage sequence having aromatic residues and proline residues.
  • the cleavage sequence of the lentiviral protease is a cleavage sequence having hydrophobic residues but excluding proline residues.
  • the cleavage sequence of the lentiviral protease is SEQ ID NO: 1 or SEQ ID NO: 3.
  • the fusion-inhibiting R peptide is selected from the group consisting of fusion-inhibiting R peptides of MLV envelope glycoprotein. In certain embodiments, the fusion-inhibiting R peptide has the amino acid sequence set forth in SEQ ID NO: 6.
  • the cytoplasmic tail domain of the MLV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 5.
  • the engineered cytoplasmic tail domain has the amino acid sequence set forth in SEQ ID NO: 42 or SEQ ID NO: 43.
  • the extracellular domain of the BaEV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 35.
  • the transmembrane domain of the BaEV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 45.
  • the engineered viral envelope protein has the amino acid sequence set forth in SEQ ID NO: 14 or 16.
  • the present application relates to a recombinant protein comprising an engineered viral envelope protein as described above, and additional peptide segments linked to the engineered viral envelope protein .
  • the additional peptide segment can be connected to the modified viral envelope protein in various ways.
  • the additional peptide segments are directly linked to the engineered viral envelope protein.
  • the additional peptide segments are directly connected to the modified viral envelope protein through peptide bonds.
  • the additional peptide segments are linked to the engineered viral envelope protein via a linker.
  • Suitable prior art linkers may consist of repeated GGGGS amino acid sequences or variants thereof.
  • a linker having the amino acid sequence (GGGGS) 4 can be used, but variants thereof can also be used (Holliger et al. (1993), Proc. Natl. Acad. Sci.
  • linkers can also be used, such as Alfthan et al. (1995), Protein Eng. 8:725-731; Choi et al. (2001), Eur. J. Immunol. 31:94-106; Hu et al. (1996) , Cancer Res. 56:3055-3061; Kipriyanov et al. (1999), J. Mol. Biol. 293:41-56, and Roovers et al. (2001), Cancer Immunol.
  • the additional peptide segment can be connected to any end of the modified viral envelope protein.
  • the additional peptide is linked to the N-terminus of the engineered viral envelope protein.
  • the additional peptide is linked to the C-terminus of the engineered viral envelope protein.
  • Recombinant proteins according to the invention may contain one or more additional peptide segments.
  • the recombinant protein according to the present invention may comprise at least 1, at least 2, at least 3, at least 5 or more additional peptide segments. It is readily understood that each of these peptide segments independently can be linked to either terminus (N-terminus or C-terminus) of the engineered viral envelope protein in various ways.
  • the recombinant protein of the present invention may comprise two additional peptide segments, wherein one additional peptide segment is connected to the modified viral envelope protein through a linker or not through a linker.
  • the recombinant protein of the present invention may comprise two or more additional peptide segments, wherein each of the two or more additional peptide segments independently passes through a linker or does not pass through a linker. Attached to the N-terminus or C-terminus of the engineered viral envelope protein.
  • the two or more additional peptide segments can be in any order. in series, and then connected to the N-terminus of the modified viral envelope protein through a linker or without a linker.
  • the two or more additional peptide segments when two or more additional peptide segments are linked to the C-terminus of the engineered viral envelope protein, the two or more additional peptide segments may concatenated in any order and then connected to the C-terminus of the engineered viral envelope protein with or without a linker.
  • the additional peptide segments may be signal peptides.
  • signal peptides can promote the secretion of recombinant proteins, thus facilitating the recovery of recombinant proteins.
  • signal peptides can be linked to the N-terminus of the engineered viral envelope protein. Additionally, during or after secretion, the signal peptide can be cleaved to produce the desired engineered viral envelope protein or recombinant protein.
  • the present application provides a polynucleotide comprising a nucleotide sequence encoding a modified viral envelope protein as described above, or a nucleotide sequence of a recombinant protein as described above.
  • the present application provides a vector comprising the polynucleotide as described above or the recombinant protein as described above.
  • the vector is selected from plasmids, phagemids, cosmids, viral vectors (eg, retroviral vectors (eg, lentiviral vectors), adenoviral vectors).
  • viral vectors eg, retroviral vectors (eg, lentiviral vectors), adenoviral vectors).
  • lentivirus is a type of virus that can deliver large amounts of viral nucleic acid into host cells. Lentiviruses are characterized by their unique ability to infect/transduce non-dividing cells and, after transduction, are able to integrate the nucleic acids they carry into the chromosomes of the host cell.
  • the vector is a lentiviral vector.
  • Lentiviral vectors are well known to those skilled in the art and are described inter alia in Naldini et al. (2000) Adv. Virus. Res. 55:599-609 and Negre et al. (2002) Biochimie 84:1161-1171.
  • Lentivirus usually contains three major genes gag, pol and env that encode virulence proteins. In some cases, the lentivirus also includes two regulatory genes, tat and rev. Depending on the specific virus type, lentiviruses may also have additional genes encoding proteins involved in the regulation, synthesis, and/or processing of viral nucleic acid, as well as other replication functions.
  • the vector also contains genes required for the formation of lentiviral particles, such as the gag gene or functional variants thereof and/or the pol gene or functional variants thereof.
  • the vector also contains regulatory genes, such as tat genes or functional variants thereof and/or rev genes or functional variants thereof.
  • the vector further comprises a nucleotide sequence encoding a lentiviral protease.
  • the lentiviral protease is selected from the group consisting of proteases of HIV (eg, HIV-1, HIV-2).
  • the lentiviral protease is HIV-1 protease.
  • the lentiviral protease is capable of recognizing and cleaving the cleavage sequence of the lentiviral protease in the engineered cytoplasmic tail domain.
  • the present application provides a host cell comprising the polynucleotide as described above or the vector as described above.
  • host cells include, but are not limited to, prokaryotic cells such as E. coli cells, and eukaryotic cells such as yeast cells, insect cells, plant cells, and animal cells (such as mammalian cells, such as mouse cells, human cells, etc.).
  • the host cell of the invention can also be a cell line, such as 293T cells. Without being bound by any theory, it is generally believed that the use of eukaryotic cells helps maintain the correct conformation of proteins and promotes protein folding.
  • the host cells of the invention are eukaryotic cells, such as human cells.
  • host cells of the invention can be immune cells, such as B cells, T cells, NK cells.
  • the present application provides a method for preparing the modified viral envelope protein as described above, which includes culturing the host cell as described above under conditions that allow protein expression. In certain preferred embodiments, the method further includes recovering the engineered viral envelope protein expressed by the host cell.
  • the present application provides a pseudotyped virus-like particle comprising a modified viral envelope protein as described above.
  • the pseudotyped virus-like particles further comprise biological material.
  • the biomaterial involves one or more compounds that tend to alter the structure and/or function of the cell.
  • the biological material is one or more nucleic acids, which in the case of lentiviral vector particles may be contained within the genome of the vector particle.
  • the genome typically contains one or more nucleic acids, preferably linked to genetic elements required for its expression in target cells, such as promoters and terminators, flanked by, for inclusion in the core element, the genome, its reverse transcription to deoxyribose
  • the nucleic acid (DNA) and the reverse-transcribed genome are imported into the nucleus of the target cell and the cis-acting elements required for the integration of the reverse-transcribed genome into the genome of the target cell.
  • the pseudotyped virus-like particles are lentiviral virus-like particles (e.g., HIV virus-like particles or SIV virus-like particles).
  • the pseudotyped virus-like particles further comprise (eg, are packaged with) a nucleic acid molecule of interest.
  • the nucleic acid molecule of interest comprises a gene of interest.
  • the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor).
  • the chimeric antigen receptor comprises an antigen-binding domain, a transmembrane region and an intracellular region.
  • the antigen-binding domain comprises a heavy chain variable region and a light chain variable region capable of specifically binding an antigen, such as a tumor antigen, such as a B cell maturation antigen (BCMA); preferably, The antigen binding domain is a scFv.
  • amino acid sequence of the heavy chain variable region is SEQ ID NO: 20.
  • amino acid sequence of the light chain variable region is SEQ ID NO: 22.
  • the transmembrane region comprises the transmembrane domain of CD8.
  • the intracellular region comprises the intracellular signaling domain of CD137 (also known as 4-1BB) and/or the intracellular signaling domain of CD3 ⁇ .
  • the chimeric antigen receptor comprises an anti-BCMA scFv, a hinge region of CD8, a transmembrane domain of CD8, an intracellular signaling domain of CD137 and an intracellular signaling domain of CD3 ⁇ .
  • the chimeric antigen receptor further comprises IL-15, which can be linked to the intracellular signaling domain of CD3 ⁇ , for example, via the self-cleaving polypeptide P2A.
  • the chimeric antigen receptor has the amino acid sequence shown in SEQ ID NO: 40.
  • the pseudotyped virus-like particles described herein are capable of expressing interleukin 15 (IL-15).
  • IL-15 interleukin 15
  • the pseudotyped virus-like particles described herein may also contain other cytokines, including, for example, IL-2, IL-18, IL-23, and IL-36.
  • the present application provides a method for preparing pseudotyped virus-like particles as previously described, comprising:
  • lentiviral virus-like particles e.g., HIV virus-like particles or SIV virus-like particles
  • a target nucleic acid molecule containing a target gene (2)
  • the one or more accessory nucleic acid molecules may comprise a gag gene and a pol gene.
  • the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor). It will be readily understood that various features described above for chimeric antigen receptors also apply here.
  • the cells are mammalian (eg, human) cells; preferably, the cells are 293T cells.
  • Pseudotyped virus-like particles can be readily prepared by one skilled in the art according to the state of the art, for example by following the general guidance provided by Sandrin et al. (2002) Blood 100:823-832.
  • one or more genes or elements in the auxiliary nucleic acid molecules can be carried in the same or different vectors, for example, 1, 2, 3, or more vectors.
  • the application provides an immune cell comprising or infected with a pseudotyped virus-like particle as described above.
  • the immune cells are mammalian (eg, human) immune cells (eg, T cells, B cells, NK cells).
  • the immune cells are NK cells.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a modified viral envelope protein selected from the group consisting of those described above.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a polynucleotide selected from the group consisting of those described above.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a carrier selected from the group consisting of those described above.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and pseudotyped virus-like particles selected from the group consisting of those described above.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and immune cells selected from the group consisting of those described above.
  • the present application provides a pharmaceutical composition
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a plurality selected from the following:
  • the present application provides a kit comprising a first nucleic acid molecule encoding the modified viral envelope protein as described above.
  • the kit further comprises one or more accessory nucleic acid molecules containing genes or elements required for the formation of lentiviral virus-like particles (eg, HIV virus-like particles or SIV virus-like particles).
  • the one or more auxiliary nucleic acid molecules comprise the gag gene or functional variants thereof and/or the pol gene or functional variants thereof.
  • the one or more accessory nucleic acid molecules comprise gag genes and/or pol genes.
  • the one or more auxiliary nucleic acid molecules further comprise a tat gene or a functional variant thereof and/or a rev gene or a functional variant thereof.
  • the one or more accessory nucleic acid molecules further comprise a nucleotide sequence encoding a lentiviral protease.
  • the lentiviral protease is capable of recognizing and cleaving the cleavage sequence of the lentiviral protease in the engineered cytoplasmic tail domain.
  • the kit further contains a nucleic acid molecule of interest comprising a gene of interest.
  • the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor).
  • the kit further comprises reagents for transferring the nucleic acid molecule into the host cell, and/or, a vector for inserting the nucleic acid molecule.
  • the host cell is a mammalian (eg, human) cell.
  • the host cell is a 293T cell.
  • the kit further comprises a host cell.
  • the one or more accessory nucleic acid molecules are contained in the same vector or different vectors, for example, 1, 2, 3, or more vectors.
  • the one or more auxiliary nucleic acid molecules and the first nucleic acid molecule are contained in the same vector or different vectors, for example, 1, 2, 3, or more in the carrier.
  • the present application provides a modified viral envelope protein as described above, or a polynucleotide as described above, or a vector as described above, or a pseudotyped virus as described above
  • a modified viral envelope protein as described above, or a polynucleotide as described above, or a vector as described above, or a pseudotyped virus as described above
  • the disease is a disease that can be prevented or treated by the nucleic acid molecule of interest.
  • the nucleic acid molecule of interest contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease. Therefore, the nucleic acid molecules of interest contained (packaged) in pseudotyped virus-like particles can be selected according to the disease to be prevented or treated.
  • the nucleic acid molecule of interest may be an anti-tumor gene, such as a gene encoding a chimeric antigen receptor (CAR).
  • the nucleic acid molecule of interest may be an anti-inflammatory gene, such as a gene encoding an anti-inflammatory factor (eg, interleukin).
  • the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases, and autoimmune diseases.
  • the medicament also contains an additional pharmaceutically active agent.
  • Additional pharmaceutically active agents may be selected depending on the disease to be prevented or treated. For example, when the disease to be prevented or treated is a tumor, the additional pharmaceutically active agent is a drug with anti-tumor activity.
  • the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitotic inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine Kinase inhibitors, radionuclide agents, radiosensitizers, anti-angiogenic agents, cytokines, molecularly targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
  • a drug with anti-tumor activity such as alkylating agents, mitotic inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine Kinase inhibitors, radionuclide agents, radiosensitizers, anti-angiogenic agents, cytokines, molecularly targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
  • the subject is a mammal, such as a human.
  • the medicament further comprises a pharmaceutically acceptable carrier, excipient, stabilizer or other agent capable of providing beneficial properties for administration of the medicament (eg, to a human subject).
  • suitable pharmaceutical carriers include, for example, sterile water, saline, dextrose, condensation products of castor oil and ethylene oxide, liquid acids, lower alcohols (e.g., C1-4 alcohols), oils (e.g., corn oil, peanut oil, sesame oil;
  • emulsifiers such as mono- or diglycerides of fatty acids or phospholipids such as lecithin), ethylene glycol, polyalkylene glycols, sodium alginate, poly(vinylpyrrolidone) and the like.
  • the carrier optionally may also contain adjuvants, preservatives, stabilizers, wetting agents, emulsifiers, penetration enhancers and the like.
  • the present application provides the use of an envelope protein as previously described for preparing pseudotyped virus-like particles.
  • the pseudotyped virus-like particles are capable of infecting immune cells (eg, T cells, B cells, NK cells).
  • immune cells eg, T cells, B cells, NK cells.
  • the pseudotyped virus-like particles are lentiviral virus-like particles (eg, HIV virus-like particles or SIV virus-like particles).
  • the present application provides the use of pseudotyped virus-like particles as previously described for transferring nucleic acid molecules of interest to immune cells (e.g., T cells, B cells, NK cells) or for preparing The use of drugs that transfer nucleic acid molecules of interest to immune cells (e.g., T cells, B cells, NK cells).
  • immune cells e.g., T cells, B cells, NK cells
  • drugs that transfer nucleic acid molecules of interest to immune cells
  • the nucleic acid molecule of interest is contained in a vector.
  • the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor.
  • the present application provides a method of transferring a nucleic acid molecule of interest into immune cells (e.g., T cells, B cells, NK cells), which method includes using pseudotyped virus-like particles as described above.
  • immune cells e.g., T cells, B cells, NK cells
  • the immune cell is infected, wherein the pseudotyped virus-like particle contains (packages) the nucleic acid molecule of interest.
  • the nucleic acid molecule of interest is contained in a vector.
  • the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor.
  • the methods are performed in vitro, ex vivo or in vivo.
  • the present application provides a method of preventing or treating a disease in a subject, the method comprising administering to the subject a prophylactically or therapeutically effective amount of a pseudotyped virus-like particle as described above Or the immune cells as mentioned above or the pharmaceutical composition as mentioned above or the kit as mentioned above.
  • the disease is a disease that can be prevented or treated by the nucleic acid molecule of interest.
  • the nucleic acid molecule of interest contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease. Therefore, the nucleic acid molecules of interest contained (packaged) in pseudotyped virus-like particles can be selected according to the disease to be prevented or treated.
  • the nucleic acid molecule of interest may be an anti-tumor gene, such as a gene encoding a chimeric antigen receptor (CAR).
  • the nucleic acid molecule of interest may be an anti-inflammatory gene, such as a gene encoding an anti-inflammatory factor (eg, interleukin).
  • the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases, and autoimmune diseases.
  • the subject is a mammal, such as a human.
  • the methods further comprise administering to the subject an additional pharmaceutically active agent.
  • Additional pharmaceutically active agents may be selected depending on the disease to be prevented or treated.
  • the additional pharmaceutically active agent is a drug with anti-tumor activity.
  • the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitosis inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine Kinase inhibitors, radionuclide agents, radiosensitizers, anti-angiogenic agents, cytokines, molecularly targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
  • nucleic acid molecule As used herein, the terms “wild” or “natural” are used interchangeably. When these terms are used to describe a nucleic acid molecule, polypeptide or protein, it means that the nucleic acid molecule, polypeptide or protein exists in nature, is found in nature, and has not undergone any artificial modification or processing.
  • virus-like particles As used herein, the terms “virus-like particles,” “pseudovirus particles,” and “virus-like particles” have the same meaning and may be used interchangeably.
  • the term “virus-like particle” specifically refers to a virus-like particle formed by the self-assembly of viral proteins, which does not encapsulate nucleic acid or encapsulates other nucleic acids. Therefore, although the virus-like particle can infect host cells, it cannot infect host cells. Have the ability to replicate autonomously. Therefore, its biosafety is high compared to real viruses.
  • the virus-like particles may be selected from virus-like particles of oncoviruses, such as murine leukemia virus (MLV), avian leukemia virus (ALV), respiratory syncytial virus (RSV) or Mason-Pfizer monkey virus (MPMV).
  • virus-like particles virus-like particles; virus-like particles of a lentivirus, such as human immunodeficiency virus (HIV, e.g., HIV-1 or HIV-2), simian immunodeficiency virus (SIV), feline immunodeficiency virus (FIV), or equine infectious anemia virus (EIAV) virus-like particles; and virus-like particles of foamy viruses, such as human foamy virus (HFV) virus-like particles.
  • HMV human foamy virus
  • lentiviral virus-like particles are well known to those skilled in the art and are described in particular in Naldini et al. (2002) Adv.Virus.Res.55:599-609 and Negre et al. (2002) Biochimie 84:1161-1171 describe.
  • lentiviral virus-like particles comprise at least the following components: (i) an envelope component consisting of a phospholipid bilayer bound to an envelope protein surrounding (ii) a core composed of bound gag proteins components, the core itself surrounding (iii) a genomic component usually consisting of ribonucleic acid (RNA) and (iv) an enzyme component (pol).
  • Lentiviral virus-like particles can be readily prepared by one skilled in the art, for example, by following the general guidance provided by Sandrin et al. (2002) Blood 100:823-832. Briefly, lentiviral virus-like particles can be formed by co-expressing in host cells (such as 293T cells) the components required to form lentiviral virus-like particles (including envelope components, core components, genome components and enzyme groups). points) to generate. Generally, 3 to 4 plasmids can be used to prepare lentiviral virus-like particles, but the number of plasmids can vary according to actual needs (such as the permutation and combination of lentiviral components).
  • 3 plasmids are used to prepare lentiviral virus-like particles, wherein one plasmid contains a nucleotide sequence encoding an envelope protein (referred to as an "envelope plasmid"), and the other plasmid
  • envelope plasmid contains the genomic component (called the “core plasmid") carrying the exogenous target gene (target nucleic acid molecule), and the other plasmid contains the nucleotide sequence (e.g., gag protein and pol protein) encoding other essential components (e.g., gag protein and pol protein). called “helper plasmid”).
  • Cells are co-transfected with the above-mentioned core plasmid, envelope plasmid and helper plasmid, and then the pseudoviral particles are packaged in the cells, and then the packaged pseudoviral particles are secreted into the extracellular culture medium, thus producing high droplet fake virus particles.
  • auxiliary plasmids constructed based on HIV-1 include, but are not limited to, pSG3. ⁇ env (Wei X et al., Antibody neutralization and escape by HIV-1.Nature 422:307-312, 2003) and NL4-3.Fluc.R-.E-(Connor RI, et al., Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes.Virology 206:935–944, 1995).
  • one or more accessory nucleic acid molecules containing genes or elements required for the formation of lentiviral virus-like particles will include, except for genes encoding envelope proteins, all necessary genes or elements, For example, genome components, genes encoding gag proteins, genes encoding pol proteins, etc.
  • virus-like particles refers to virus-like particles that contain foreign viral envelope glycoproteins.
  • virus-like particles according to the invention are pseudotyped with engineered viral envelope proteins as defined above.
  • Baboon endogenous virus also known as “baboon endogenous retrovirus", BaEV
  • BaEV Bactet al.
  • BaEV envelope glycoproteins are described inter alia in Benveniste et al. (1974) Nature 248: 17-20 and Todaro et al. (1974) Cell 2: 55-61.
  • BaEV envelope glycoprotein is intended to include the wild-type form of the BaEV envelope glycoprotein or to be at least 85% identical to said wild-type BaEV envelope glycoprotein, preferably at least 90%, more preferably at least A mutant of the wild-type BaEV envelope glycoprotein that is 95%, still more preferably at least 99%, identical and retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
  • the sequence of the natural BaEV envelope glycoprotein can be found in public databases, for example, the amino acid sequence shown in SEQ ID NO: 44. As used herein, when referring to the amino acid sequence of the BaEV envelope glycoprotein, it is described using the sequence shown in SEQ ID NO: 44. For example, the expression "amino acids 530 to 564 of BaEV envelope glycoprotein" refers to amino acid residues 530-564 of the polypeptide shown in SEQ ID NO: 44. However, those skilled in the art understand that in the amino acid sequence of the BaEV envelope glycoprotein, mutations or variations (including, but not limited to, substitutions, deletions and/or additions) can occur naturally or be artificially introduced without affecting its biological function. .
  • the term "BaEV envelope glycoprotein” shall include all such sequences, including for example the sequence shown in SEQ ID NO: 44 and its natural or artificial variants. Moreover, when describing the sequence fragment of the BaEV envelope glycoprotein, it includes not only the sequence fragment of SEQ ID NO: 44, but also the corresponding sequence fragment in its natural or artificial variants.
  • the expression "amino acid residues 530-564 of BaEV envelope glycoprotein” includes amino acid residues 530-564 of SEQ ID NO: 44, and corresponding fragments in its variants (natural or artificial).
  • the expression “corresponding sequence fragment” or “corresponding fragment” means that when the sequences are optimally aligned, that is when the sequences are aligned to obtain the highest percent identity, equivalent positions are located in the sequences being compared. fragment.
  • the BaEV envelope glycoprotein consists of a cytoplasmic tail domain, a transmembrane domain and an extracellular domain.
  • the regions in the BaEV envelope glycoprotein sequence corresponding to the cytoplasmic tail domain, the transmembrane domain and the extracellular domain can be easily determined by the skilled person.
  • the cytoplasmic tail domain includes amino acids 530 to 564 of the BaEV envelope glycoprotein;
  • the transmembrane domain includes amino acids 507 to 529 of the BaEV envelope glycoprotein;
  • the extracellular domain includes amino acids 1 to 506 of the BaEV envelope glycoprotein.
  • the transmembrane domain of the BaEV envelope glycoprotein includes or consists of the amino acid sequence SEQ ID NO: 45.
  • the wild-type extracellular domain of the BaEV envelope glycoprotein includes or consists of the amino acid sequence SEQ ID NO: 35.
  • the term "MLV envelope glycoprotein” is intended to include the wild-type form of the MLV envelope glycoprotein or to be at least 85% identical to said wild-type MLV envelope glycoprotein, preferably at least 90%, more preferably at least A mutant of the wild-type MLV envelope glycoprotein that is 95%, still more preferably at least 99%, identical and retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
  • the sequence of the natural MLV envelope glycoprotein can be found in public databases, for example, the amino acid sequence shown in SEQ ID NO: 34.
  • amino acid sequence of the MLV envelope glycoprotein it is described using the sequence set forth in SEQ ID NO: 34.
  • amino acids 623 to 655 of MLV envelope glycoprotein refers to amino acid residues 623 to 655 of the polypeptide shown in SEQ ID NO: 34.
  • mutations or variations including, but not limited to, substitutions, deletions and/or additions can occur naturally or be artificially introduced without affecting its biological function. .
  • the term "MLV envelope glycoprotein” shall include all such sequences, including for example the sequence shown in SEQ ID NO: 34 and its natural or artificial variants. Moreover, when describing the sequence fragment of the MLV envelope glycoprotein, it includes not only the sequence fragment of SEQ ID NO: 34, but also the corresponding sequence fragment in its natural or artificial variants.
  • the expression "amino acid residues 623 to 655 of MLV envelope glycoprotein” includes amino acid residues 623 to 655 of SEQ ID NO: 34, and variants thereof (natural or the corresponding fragment in artificial).
  • the expression “corresponding sequence fragment” or “corresponding fragment” means that when the sequences are optimally aligned, that is when the sequences are aligned to obtain the highest percent identity, equivalent positions are located in the compared sequences. fragment.
  • the MLV envelope glycoprotein consists of a cytoplasmic tail domain, a transmembrane domain, and an extracellular domain.
  • the regions of the MLV envelope glycoprotein sequence corresponding to the cytoplasmic tail domain, transmembrane domain and extracellular domain can be readily determined by the skilled person.
  • the cytoplasmic tail domain includes amino acids 623 to 655 of the MLV envelope glycoprotein. Therefore, amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein generally correspond to amino acids 623 to 635 of the MLV envelope glycoprotein.
  • the cytoplasmic tail domain of the MLV envelope glycoprotein consists of the amino acid sequence SEQ ID NO: 5.
  • amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein are composed of amino acid residues 1-13 of the amino acid sequence SEQ ID NO: 5.
  • fusion-inhibitory R peptide refers to the C-terminal part of the cytoplasmic tail domain of the envelope glycoprotein, which normally carries the tyrosine endocytic signal -YXXL and is involved in viral particle maturation It is cleaved by viral protease during the process, thereby enhancing the membrane fusion of envelope glycoproteins.
  • Fusion-inhibiting R peptides in various envelope glycoproteins can be readily determined by, and are known to, those skilled in the art.
  • fusion-inhibiting R peptides of the BaEV envelope glycoprotein typically include amino acids 547 to 564 of the BaEV envelope glycoprotein.
  • the fusion-inhibiting R peptide of the MLV envelope glycoprotein includes amino acids 640 to 655 of the MLV envelope glycoprotein, an exemplary sequence of which is shown in SEQ ID NO: 6.
  • cleavage sequence refers to a sequence recognized and cleaved by the lentiviral protease.
  • viral polyproteins e.g., Gag and Gag-Pro-Pol polyproteins
  • Pol protein can produce reverse transcriptase after cleavage
  • lentiviral proteases at the final stage of replication , protease, ribonuclease H and integrase.
  • These cleavage sequences can be divided into two types, natural cleavage sequences and synthetic cleavage sequences.
  • the native cleavage sequences of lentiviral proteases are well known to those skilled in the art, see e.g. József Viruses 2010, 2, 147-165; doi:10.3390/v2010147.
  • chimeric antigen receptor refers to a receptor having one or more intracellular signaling domains that engage an immune cell (e.g., NK cell, B cell, T cell) Engineered immune cell receptors with extracellular antibody-derived targeting domains (e.g., scFv). T cells that express such chimeric antigen receptors are called CAR-T cells.
  • an immune cell capable of expressing a CAR will have an antigen specificity determined by the targeting domain of the CAR.
  • CARs Methods of constructing and manufacturing CARs (e.g., for cancer treatment) are known in the art, see, e.g., Park et al., Trends Biotechnol., 29:550-557, 2011; Grupp et al., N Engl J Med., 368:1509-1518, 2013; Han et al., J. Hematol Oncol., 6:47, 2013; PCT patent publications WO2012/079000, WO2013/059593; and US patent publication 2012/0213783, all of which are incorporated by reference in their entirety Incorporated herein.
  • the term "vector” refers to a nucleic acid delivery vehicle into which a polynucleotide can be inserted.
  • the vector can express the protein encoded by the inserted polynucleotide, the vector is called an expression vector.
  • the vector can be introduced into the host cell through transformation, transduction or transfection, so that the genetic material elements it carries can be expressed in the host cell.
  • Vectors are well known to those skilled in the art, including but not limited to: plasmids; phagemids; cosmids; artificial chromosomes, such as yeast artificial chromosomes (YAC), bacterial artificial chromosomes (BAC) or P1-derived artificial chromosomes (PAC) ; Phages such as lambda phage or M13 phage and animal viruses, etc.
  • Animal viruses that can be used as vectors include, but are not limited to, retroviruses (including lentiviruses), adenoviruses, adeno-associated viruses, herpesviruses (such as herpes simplex virus), poxviruses, baculoviruses, papillomaviruses, papillomaviruses, Polyomavacuolating viruses (such as SV40).
  • retroviruses including lentiviruses
  • adenoviruses such as herpes simplex virus
  • poxviruses poxviruses
  • baculoviruses papillomaviruses
  • papillomaviruses papillomaviruses
  • Polyomavacuolating viruses such as SV40.
  • a vector can contain a variety of expression-controlling elements, including, but not limited to, promoter sequences, transcription initiation sequences, enhancer sequences, selection elements, and reporter genes
  • the term "host cell” refers to a cell that can be used to introduce a vector, which includes, but is not limited to, prokaryotic cells such as E. coli or Bacillus subtilis, fungal cells such as yeast cells or Aspergillus, etc. Insect cells such as S2 Drosophila cells or Sf9, or animal cells such as fibroblasts, CHO cells, COS cells, NSO cells, HeLa cells, BHK cells, HEK 293 cells or human cells.
  • prokaryotic cells such as E. coli or Bacillus subtilis
  • fungal cells such as yeast cells or Aspergillus
  • Insect cells such as S2 Drosophila cells or Sf9
  • animal cells such as fibroblasts, CHO cells, COS cells, NSO cells, HeLa cells, BHK cells, HEK 293 cells or human cells.
  • a vector can be introduced into a host cell to thereby produce transcripts, proteins, or peptides, including proteins, fusion proteins, isolated nucleic acid molecules, and the like as described herein.
  • cognate degeneracy refers to the property of the genetic code that allows nucleotide sequence variation without affecting the amino acid sequence of the encoded polypeptide.
  • the skilled artisan is familiar with the "codon bias" exhibited by a particular host cell in the use of nucleotide codons to specify certain amino acids. Therefore, when synthesizing a gene with the goal of improving expression in a host cell, it is ideal to design the gene so that its codon usage frequency is close to that of the host cell's preferred codon usage.
  • codon optimization when referring to the coding region of a gene or nucleic acid molecule used to transform various organisms, refers to changing the codons in the coding region of the gene or nucleic acid molecule to reflect that of the host organism. Typical codon usage without changing the polypeptide encoded by the DNA. Such optimization involves replacing at least one or more than one or a significant number of codons with one or more codons that are more frequently used in the genes of the organism.
  • transformation means the process of introducing a "foreign” (ie, heterologous) gene, DNA, or RNA sequence into a host cell.
  • transformation, transduction or transfection of a foreign gene or sequence will enable the host cell to express the introduced gene or sequence and produce the desired substance.
  • Methods for transformation, transduction or transfection are known and include, for example, calcium phosphate transformation, polybrene transformation, protoplast fusion, electroporation, sonication methods (e.g., sonoporation), liposome transformation, visualization.
  • Microinjection naked DNA, plasmid vectors, viral vectors, gene gun (microparticle bombardment), silicon carbide-mediated transformation, aerosol beam, or PEG transformation, etc.
  • the term "effective amount” means an amount sufficient to obtain, or at least partially obtain, the desired effect.
  • a disease-preventing effective amount refers to an amount sufficient to prevent, prevent, or delay the occurrence of a disease
  • a disease-treating effective amount refers to an amount sufficient to cure or at least partially prevent the disease and its complications in patients who already suffer from the disease. Determining such effective amounts is well within the capabilities of those skilled in the art. For example, the amount effective for therapeutic use will depend on the severity of the disease to be treated, the overall status of the patient's own immune system, the patient's general condition such as age, weight and gender, the manner in which the drug is administered, and other treatments administered concurrently etc.
  • the inventor of the present application prepared a modified virus envelope protein through extensive experiments, and further prepared pseudotyped virus-like particles containing it. Compared with the prior art, the modified viral envelope protein improves the infection efficiency of virus-like particles on immune cells (eg, B cells, T cells, NK cells). In addition, it has been found that the toxicity of the obtained virus-like particles to ordinary host cells (eg, 293T cells) is significantly reduced.
  • immune cells eg, B cells, T cells, NK cells.
  • Such pseudotyped virus-like particles are particularly useful, for example, for the efficient introduction of exogenous nucleic acids of interest (eg, exogenous nucleic acids encoding chimeric antigen receptors (CARs)) into cells (especially immune cells, e.g. B cells, T cells, NK cells), and allow them to express the product encoded by the target exogenous nucleic acid (such as chimeric antigen receptor (CAR)).
  • CARs chimeric antigen receptor
  • the cells (especially immune cells) thus obtained can have good application prospects in many aspects, such as preventing and/or treating viral infections, bacterial infections, cancer, tumors, inflammatory diseases or autoimmune diseases.
  • FIG. 1 shows a schematic diagram of the connection of six BaEV envelope proteins, in which SP is the signal peptide, BaEVwt is the wild-type BaEV envelope structure, and BaEVwt contains the extracellular domain (Ectodomain) and transmembrane domain of the BaEV envelope glycoprotein.
  • BaEVRless contains the extracellular domain (Ectodomain) of the BaEV envelope glycoprotein, the transmembrane domain (TM) and the cytoplasmic tail domain lacking the fusion inhibitory R peptide ( Cytoplasm/R-); BaEVTR contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and the MLV cytoplasmic tail domain (MLV Cytoplasm); BaEVTRless contains the BaEV envelope glycoprotein The extracellular domain (Ectodomain) and transmembrane domain (TM), as well as the MLV cytoplasmic tail domain (MLV Cytoplasm/R-) lacking the fusion inhibitory R peptide; BaEVTR-pro contains the extracellular domain of the BaEV envelope glycoprotein.
  • BaEVTR-synt contains the BaEV envelope The extracellular domain (Ectodomain) and transmembrane domain (TM) of the glycoprotein, as well as the MLV Cytoplasm-synt that replaces the synt sequence (synthetic HIV-1 protease cleavage sequence).
  • FIG. 2 shows a schematic diagram of the connection of two chimeric antigen receptors.
  • BCMA CAR contains SP, BCMA scFv, CD8Hinge, CD8TM, 4-1BB and CD3 ⁇ ;
  • BCMA CAR-sIL15 contains SP, BCMA scFv, CD8Hinge, CD8TM, 4 -1BB, CD3 ⁇ , P2A and sIL15.
  • SP is the signal peptide
  • BCMA scFv is the single chain antibody against B cell maturation antigen
  • CD8Hinge is the CD8 hinge region
  • CD8TM is the CD8 transmembrane region
  • 4-1BB is the costimulatory factor
  • CD3 ⁇ is the intracellular signaling domain of CD3 ⁇ .
  • P2A is a self-cleaving polypeptide
  • sIL15 is secreted interleukin 15.
  • Figure 3 shows the results of flow cytometry analysis of Jurkat and NK92 cells after transfection of virus-like particles constructed with five envelope proteins respectively.
  • Figure 4 shows the results of flow cytometry analysis of primary NK cells after they were transfected with viruses constructed from five envelope proteins.
  • Figure 5 shows the cell morphology after transfection of 293T cells with vectors encoding different envelope proteins.
  • Figure 5A shows the cell morphology after transfection of 293T cells with vectors encoding BaEVRless.
  • Figure 5B shows the cell morphology after transfection with vectors encoding BaEVTRless.
  • Figure 5C shows the cell morphology of 293T cells after transfection with a vector encoding BaEVTR.
  • Figure 5D shows the cell morphology of 293T cells after transfection with a vector encoding BaEVTR-pro.
  • Figure 5E shows the cell morphology after transfection with a vector encoding BaEVTR-pro. Cell morphology after transfection of 293T cells with synt vector.
  • Figure 6 shows the results of flow cytometry analysis of human T lymphocytes after transfecting virus-like particles constructed with five envelope proteins respectively.
  • BaEVRless (the amino acid sequence is shown in SEQ ID NO: 8) is a BaEV envelope glycoprotein that lacks the fusion inhibitory R peptide and contains the BaEV envelope.
  • BaEVTR (the amino acid sequence is shown in SEQ ID NO: 10) is a BaEV envelope glycoprotein that replaces the MLV cytoplasmic tail domain. It contains the extracellular domain (Ectodomain) and transmembrane domain (Ectodomain) of the BaEV envelope glycoprotein. TM), and MLV cytoplasmic tail domain (MLV Cytoplasm);
  • BaEVTRless (the amino acid sequence is shown in SEQ ID NO:12) is based on BaEVTR and deletes the fusion inhibitory R peptide, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and MLV cytoplasmic tail domain lacking fusion inhibitory R peptide (MLV Cytoplasm/R-);
  • BaEVTR-pro (amino acid sequence shown in SEQ ID NO: 14) is a modified BaEV envelope glycoprotein, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and The MLV cytoplasmic tail domain (MLV Cytoplasm-Pro, the amino acid sequence is shown in SEQ ID NO: 42) that replaces the pro sequence (natural HIV-1 protease cleavage sequence);
  • BaEVTR-synt (amino acid sequence shown in SEQ ID NO: 16) is a modified BaEV envelope glycoprotein, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and The MLV cytoplasm tail domain (MLV Cytoplasm-synt, the amino acid sequence is shown in SEQ ID NO: 43) that replaces the synt sequence (synthetic HIV-1 protease cleavage sequence).
  • nucleotide sequences encoding five envelope proteins were synthesized respectively (the nucleotide sequence encoding BaEVRless shown in SEQ ID NO:9, the nucleotide sequence encoding BaEVTR shown in SEQ ID NO:11, SEQ ID NO The nucleotide sequence encoding BaEVTRless shown in SEQ ID NO:13, the nucleotide sequence encoding BaEVTR-pro shown in SEQ ID NO:15, and the nucleotide sequence encoding BaEVTR-synt shown in SEQ ID NO:17).
  • BCMA CAR contains SP, BCMA scFv, CD8Hinge, CD8TM, 4-1BB and CD3 ⁇ ;
  • BCMA CAR-sIL15 contains SP, BCMA scFv , CD8Hinge, CD8TM, 4-1BB, CD3 ⁇ , P2A and sIL15.
  • SP is the signal peptide (the amino acid sequence is shown in SEQ ID NO:18)
  • BCMA scFv is the single-chain antibody against B cell mature antigen (the VH amino acid sequence is shown in SEQ ID NO:20, and the VL amino acid sequence is shown in SEQ ID NO:22)
  • CD8Hinge is the hinge of the chimeric receptor (the amino acid sequence is shown in SEQ ID NO:26)
  • CD8TM (the amino acid sequence is shown in SEQ ID NO:28) is the transmembrane region of the chimeric receptor
  • 4 -1BB is a co-stimulatory factor (the amino acid sequence is shown in SEQ ID NO:30)
  • CD3 ⁇ is an intracellular signal peptide (the amino acid sequence is shown in SEQ ID NO:32)
  • P2A is a connecting peptide (the amino acid sequence is shown in SEQ ID NO: 38)
  • sIL15 is super interleukin 15 (the amino acid sequence is shown in SEQ ID NO: 36
  • the nucleic acid molecules encoding the above two chimeric antigen receptors were constructed into Lenti-3 lentiviral vector (Aikangde Biotechnology (Suzhou) Co., Ltd.). Select single clones for culture and conservation, and finally extract the plasmid for sequencing, and freeze the correctly sequenced bacterial liquid for later use.
  • 293T cells were inoculated into a 15cm culture dish, and plasmid transfection was performed the next day when the cell confluence reached 80%.
  • Example 1 Refer to the steps described in Example 1 and Example 2, package the virus under the same virus packaging system and the same plasmid ratio, collect the virus stock solution and store it at 4°C for later use.
  • BCMA-PE antigen purchased from ACRO, Cat. No. BCA-HP2H2
  • the nucleic acid sequence encoding CAR is expressed under the drive of a promoter.
  • Jurkat and NK92 cells transfected with lentivirus are labeled using BCMA-PE antigen and measured by flow cytometry, reflecting the expression level of CAR on the surface of Jurkat and NK92 cells.
  • the FACS test results are shown in Table 2 and Figure 3.
  • Example 1 Refer to the steps of Example 1 and Example 2 to prepare BCMA CAR virus concentrates with different virus envelope structures. All virus concentrates are packaged using the same packaging conditions, and the same concentration multiples are used for virus concentration, and the resulting virus is concentrated. The solution was stored at -80°C for later use.
  • Resuscitate cord blood CBMC use magnetic beads to remove T lymphocytes, culture with MACS basic medium + 10% FBS + 500IU IL2 + 1% NK MACS supplement, and adjust the cell density to 1 ⁇ 10 ⁇ 6 /mL , add K562 feeder cells at a ratio of 1:1, and place them in a 37°C, 5% CO 2 incubator for static culture.
  • Example 5 Effects of different envelope structures on the cell status of packaging cells 293T
  • the packaging cells 293T were photographed 48 hours after plasmid transfection to observe the cytotoxicity of lentiviruses with different envelope structures to the packaging cells.
  • Virus dilution Use cell culture medium as virus dilution, prepare 8 EP tubes, add 0.95ml medium to the first tube, and add 0.5ml medium to each of the others; follow the dilution ratio of 1:1, 1:2, 1: 4, 1:8, 1:16, 1:32, 1:64, 1:128 for dilution; add 50 ⁇ l virus concentrate to the first tube, mix well, take 500 ⁇ l into the second tube, mix well, take 500 ⁇ l into the second tube 3 tubes, and so on. Then add the corresponding 200 ⁇ l virus diluent to each well of the 24-well plate with cells spread, and mix well.
  • Sample virus titer TU/ml [(sample positive rate - background well positive rate) ⁇ total cell number]/virus volume ml.
  • the lenti-BCMA CAR-sIL15 virus titer test results showed that the virus titer of BaEVTR-pro envelope reached 2.16 ⁇ 10 ⁇ 8 TU/mL; the virus titer of BaEVTR-synt envelope reached 8.08 ⁇ 10 ⁇ 7 TU/mL. , second only to BaEVTR-pro; the virus titers of both are significantly higher than the other three virus envelopes, that is, the virus titer of the BaEVRless envelope is 4.45 ⁇ 10 7 TU/mL, and the virus titer of the BaEVTRless envelope is 2.28 ⁇ 10 7 TU/mL, the virus titer of BaEVTR envelope is 2.85 ⁇ 10 7 TU/mL. Therefore, by replacing the HIV protease cleavage sequence of the BaEVTR cytoplasmic tail with pro or synt, the activity titer of the virus can be significantly increased.
  • Example 7 Transduction efficiency of modified envelope lentivirus in other immune cells
  • Resuscitate human PBMC use anti-CD3/CD28 magnetic beads to separate T lymphocytes from PBMC, use X-VIVO+10% FBS+200IU IL-2 to adjust the cells to 1-2 ⁇ 10 ⁇ 6 /mL, Place in a 37°C, 5% CO2 incubator for 48h. Centrifuge the T cells, resuspend them in culture medium, adjust the cell density to 2 ⁇ 10 ⁇ 6 cells/ml, plate 1mL/well on a 24-well plate, add 100 ⁇ L of virus concentrate, add DEAE 5 ⁇ g/ml; centrifuge and transduce, liter 5 minus 1, and centrifuged at room temperature for 90 minutes. After centrifugation, the cells were cultured at 37°C for 48 hours, and BCMA-PE antigen was used to detect the positive rate of cells expressing CAR protein by flow cytometry.
  • the results are shown in Table 3 and Figure 6.
  • the virus packaged by BaEVTR-pro envelope plasmid has an infection efficiency of 87.56% on human T lymphocytes, which is significantly higher than other envelope structures.

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Abstract

Provided are a modified viral envelope protein and the use thereof, and a pseudotype virus-like particle containing the modified viral envelope protein and the use thereof. The modified viral envelope protein can improve the infection efficiency of the pseudotype virus-like particle with regard to immune cells (e.g., B cells, T cells, and NK cells).

Description

经改造的病毒包膜蛋白及其用途Modified viral envelope proteins and their uses 技术领域Technical field
本申请涉及生物医药领域,具体涉及一种经改造的病毒包膜蛋白,和包含所述经改造的病毒包膜蛋白的假型化病毒样颗粒,该经改造的病毒包膜蛋白能够提升假型化病毒样颗粒对免疫细胞(例如,B细胞,T细胞,NK细胞)的感染效率。此外,本申请还涉及所述经改造的病毒包膜蛋白的用途和所述假型化病毒样颗粒的用途。This application relates to the field of biomedicine, specifically to a modified viral envelope protein, and pseudotyped virus-like particles containing the modified viral envelope protein. The modified viral envelope protein can enhance pseudotyping. The infection efficiency of virus-like particles on immune cells (e.g., B cells, T cells, NK cells). Furthermore, the present application relates to the use of the engineered viral envelope proteins and the use of the pseudotyped virus-like particles.
背景技术Background technique
自然杀伤细胞(以下缩写为“NK细胞”)是人体中一群能够识别并破坏受病毒感染的细胞或发生癌变的细胞(也称为肿瘤细胞)的独特淋巴细胞群体。NK细胞在接触肿瘤细胞时可以通过非MHC依赖模式直接杀伤肿瘤细胞,同时产生和分泌相关的细胞因子,促进杀伤功能并招募机体的其他免疫细胞共同发挥抗肿瘤的作用。这些功能特征使得NK细胞成为目前临床上极具吸引力的肿瘤治疗药物。随着细胞治疗技术的迅速发展,NK细胞的体外分离、扩增培养等方法日益成熟。并且,不管是从理论上,还是目前的临床试验,已显示NK细胞可以实现异体通用,实现细胞治疗药物的现货供应(May Daher等,2020)。Natural killer cells (hereinafter abbreviated as "NK cells") are a unique group of lymphocytes in the human body that can recognize and destroy virus-infected cells or cancerous cells (also known as tumor cells). When NK cells come into contact with tumor cells, they can directly kill tumor cells in an MHC-independent manner, and at the same time produce and secrete related cytokines to promote killing functions and recruit other immune cells in the body to jointly play an anti-tumor role. These functional characteristics make NK cells a very attractive cancer treatment drug in clinical practice. With the rapid development of cell therapy technology, methods such as in vitro isolation, expansion and culture of NK cells have become increasingly mature. Moreover, whether in theory or in current clinical trials, it has been shown that NK cells can be allogeneic and achieve off-the-shelf supply of cell therapy drugs (May Daher et al., 2020).
对免疫细胞进行基因修饰能够有效的提高其肿瘤靶向和杀伤功能,例如表达嵌合抗原受体(CAR)的T细胞(简称CAR-T),在临床试验中尤其是血液瘤治疗中表现出显著的疗效。因此,表达嵌合抗原受体(CAR)的免疫细胞的使用是癌症治疗中有前景的治疗选择。从生产成本和现货供应的角度考虑,CAR-NK细胞是CAR-T细胞的良好替代品(Elizabeth L Siegler等,2018)。然而,相比于原代T细胞,原代NK细胞的基因修饰面临着重大的技术挑战(Klingemann等,2014)。从目前的研究报道看,一方面,转染方法如电穿孔和脂质体转染,可以实现有效的目的基因递送,但目的基因的表达是瞬时的,无法实现临床的应用。此外,电穿孔和转染会造成较高的细胞死亡(Tae Kyung Kim,2010)。另一方面,基于病毒载体的转导可以作为NK细胞持久性基因修饰的一种选择。逆转录病毒可以实现原代NK细胞的转导,但转导效率较低,需要较高的病毒滴度(Stephan Müller,2020)。此外,由于逆转录病毒载体在逆转录病毒膜内含有来自外源病毒物种的异源性包膜蛋白。逆转录病毒载体的插入突变等安全性问题限制了其在临床上的应用。Genetic modification of immune cells can effectively improve their tumor targeting and killing functions, such as T cells expressing chimeric antigen receptor (CAR) (referred to as CAR-T), which have been shown in clinical trials, especially in the treatment of hematomas. Remarkable therapeutic effect. Therefore, the use of immune cells expressing chimeric antigen receptors (CARs) is a promising therapeutic option in cancer treatment. From the perspective of production cost and off-the-shelf supply, CAR-NK cells are a good substitute for CAR-T cells (Elizabeth L Siegler et al., 2018). However, compared with primary T cells, genetic modification of primary NK cells faces significant technical challenges (Klingemann et al., 2014). Judging from current research reports, on the one hand, transfection methods such as electroporation and lipofection can achieve effective target gene delivery, but the expression of the target gene is transient and cannot be used in clinical applications. In addition, electroporation and transfection can cause higher cell death (Tae Kyung Kim, 2010). On the other hand, viral vector-based transduction can be an option for persistent genetic modification of NK cells. Retrovirus can achieve transduction of primary NK cells, but the transduction efficiency is low and requires a high virus titer (Stephan Müller, 2020). In addition, since retroviral vectors contain heterologous envelope proteins from foreign viral species within the retroviral membrane. Safety issues such as insertional mutations of retroviral vectors limit their clinical application.
在逆转录病毒科中,慢病毒载体是目前报道遗传毒性较小,在临床上广泛应用的病毒载体,例如CAR-T的应用(Sara Ghorashian等,2019)。然而,尽管慢病毒载体在原代T细胞上具有较高的转导效率,但在原代NK细胞上转导效率较差,而且即使使用较高的慢病毒滴度也只能转导10%的NK细胞,这可能与NK细胞的天然抗病毒机制有关(Sutlu等,2012)。另外,使用较高滴度的慢病毒对NK细胞本身造成一定的毒副作用,造成NK细胞细胞活率下降,因此急需开发能够稳定转导NK细胞并持久表达的病毒载体。In the retroviridae family, lentiviral vectors are currently reported to be less genetically toxic and widely used in clinical applications, such as the application of CAR-T (Sara Ghorashian et al., 2019). However, although lentiviral vectors have high transduction efficiency on primary T cells, they have poor transduction efficiency on primary NK cells, and only 10% of NK can be transduced even with higher lentiviral titers. cells, which may be related to the natural antiviral mechanism of NK cells (Sutlu et al., 2012). In addition, the use of higher titers of lentivirus will cause certain toxic side effects on NK cells themselves, resulting in a decrease in NK cell viability. Therefore, there is an urgent need to develop viral vectors that can stably transduce NK cells and sustain expression.
在WO2013/045639A1中,公开了使用修饰的狒狒内源性逆转录病毒(BaEV)包膜糖蛋白假型化的病毒载体转导静止HSC以及静息T和B细胞的方法。相比VSV-G蛋白假型化的慢病毒,BaEV包膜糖蛋白假型化的病毒载体显著提高了在HSC中的转导效率。在WO2019/121945中,公开了使用修饰的狒狒内源性逆转录病毒(BaEV)包膜糖蛋白假型化的病毒载体,相比VSV-G蛋白假型化的慢病毒,在原代NK细胞可以实现较高效率的转导。但不足的是,这种修饰的狒狒内源性逆转录病毒(BaEV)包膜糖蛋白假型化的病毒载体由于抑制性R肽的缺乏,导致该病毒包膜对包装细胞产生严重的细胞毒性,尤其极容易产生合胞体,不利于病毒颗粒的大量产生(Hélio A.Tomás等,2019)。In WO2013/045639A1, a method of transducing quiescent HSCs as well as quiescent T and B cells using viral vectors pseudotyped with modified baboon endogenous retrovirus (BaEV) envelope glycoproteins is disclosed. Compared with lentivirus pseudotyped with VSV-G protein, viral vectors pseudotyped with BaEV envelope glycoprotein significantly improved the transduction efficiency in HSCs. In WO2019/121945, a viral vector pseudotyped with modified baboon endogenous retrovirus (BaEV) envelope glycoprotein was disclosed. Compared with lentivirus pseudotyped with VSV-G protein, primary NK cells can Achieve higher efficiency transduction. However, the disadvantage is that this modified baboon endogenous retrovirus (BaEV) envelope glycoprotein pseudotyped viral vector lacks the inhibitory R peptide, causing the viral envelope to produce severe cytotoxicity to packaging cells. , it is especially easy to produce syncytia, which is not conducive to the large-scale production of virus particles (Hélio A. Tomás et al., 2019).
因此,对诸如原代NK等难以进行基因修饰的淋巴细胞,需要开发持久有效且安全稳定的病毒载体。Therefore, it is necessary to develop durable, effective, safe and stable viral vectors for lymphocytes that are difficult to genetically modify, such as primary NK.
发明内容Contents of the invention
本申请的发明人经过大量实验和反复摸索,制备了一种经改造的病毒包膜蛋白,并进一步制备了包含这类病毒包膜蛋白的假型化病毒样颗粒。所述经改造的病毒包膜蛋白提升了假型化病毒样颗粒对免疫细胞(例如,B细胞,T细胞,NK细胞)的感染效率。此类假型化病毒样颗粒是特别有用的,例如,其可以用于将目的外源核酸(例如编码嵌合抗原受体(CAR)的外源核酸)高效导入细胞(特别是免疫细胞,例如B细胞,T细胞,NK细胞),并使其表达目的外源核酸所编码的产物(例如嵌合抗原受体(CAR))。由此所获得的细胞(特别是免疫细胞)可以在多个方面(例如在癌症治疗中)具有良好的应用前景。After extensive experiments and repeated explorations, the inventors of the present application prepared a modified viral envelope protein, and further prepared pseudotyped virus-like particles containing such viral envelope proteins. The modified viral envelope protein improves the infection efficiency of pseudotyped virus-like particles on immune cells (eg, B cells, T cells, NK cells). Such pseudotyped virus-like particles are particularly useful, for example, for the efficient introduction of exogenous nucleic acids of interest (eg, exogenous nucleic acids encoding chimeric antigen receptors (CARs)) into cells (especially immune cells, e.g. B cells, T cells, NK cells), and allow them to express the product encoded by the target exogenous nucleic acid (such as chimeric antigen receptor (CAR)). The cells thus obtained (especially immune cells) may have good application prospects in many aspects (for example, in cancer treatment).
由此,在本申请的第一方面,提供了一种经改造的病毒包膜蛋白,其包含狒狒内源性病毒(baboon endogenous virus,BaEV)包膜糖蛋白的跨膜结构域和胞外结构域,以及经改造的胞质尾结构域,所述经改造的胞质尾结构域包含鼠白血病病毒(murine leukaemia virus,MLV)包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基,慢病毒蛋 白酶的切割序列,以及融合抑制性R肽。Thus, in the first aspect of the present application, a modified viral envelope protein is provided, which includes the transmembrane domain and extracellular structure of the baboon endogenous virus (BaEV) envelope glycoprotein. domain, and a modified cytoplasmic tail domain comprising amino acids 1-13 of the cytoplasmic tail domain of murine leukemia virus (MLV) envelope glycoprotein residues, the cleavage sequence of the lentiviral protease, and the fusion inhibitory R peptide.
所述的BaEV包膜糖蛋白包括BaEV包膜糖蛋白的野生型或与所述野生型BaEV包膜糖蛋白具有至少85%、优选至少90%、更优选至少95%、还更优选至少99%同一性的所述野生型BaEV包膜糖蛋白的突变体,所述突变体糖蛋白保留野生型糖蛋白结合细胞膜并与细胞膜融合的能力。The BaEV envelope glycoprotein includes the wild type of BaEV envelope glycoprotein or has at least 85%, preferably at least 90%, more preferably at least 95%, still more preferably at least 99% of the wild type BaEV envelope glycoprotein. Identity mutants of the wild-type BaEV envelope glycoprotein, the mutant glycoprotein retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
在某些实施方案中,所述经改造的胞质尾结构域由MLV包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基,慢病毒蛋白酶的切割序列,以及融合抑制性R肽组成。In certain embodiments, the engineered cytoplasmic tail domain is composed of amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein, a cleavage sequence of a lentiviral protease, and a fusion inhibitory R peptide composition.
在某些实施方案中,所述慢病毒蛋白酶选自人免疫缺陷病毒HIV(例如,HIV-1,HIV-2)的蛋白酶。在某些实施方案中,所述慢病毒蛋白酶为HIV-1蛋白酶。In certain embodiments, the lentiviral protease is selected from the group consisting of proteases of human immunodeficiency virus HIV (eg, HIV-1, HIV-2). In certain embodiments, the lentiviral protease is HIV-1 protease.
在某些实施方案中,所述慢病毒蛋白酶的切割序列为天然的HIV-1蛋白酶切割序列或人工合成的HIV-1蛋白酶切割序列。In certain embodiments, the cleavage sequence of the lentiviral protease is a natural HIV-1 protease cleavage sequence or a synthetic HIV-1 protease cleavage sequence.
在某些实施方案中,所述慢病毒蛋白酶能够在其识别的位点处切割Gag和Gag-Pro-Pol等多蛋白,从而能够将形态独特的未成熟病毒粒子转化为成熟病毒。通过对慢病毒蛋白酶切割位点的序列进行分析,将天然的慢病毒蛋白酶(例如,HIV-1蛋白酶)的切割序列分成了两种类型:具有芳香族残基和脯氨酸残基的切割序列;以及,具有疏水性残基但不包括脯氨酸残基的切割序列。关于慢病毒蛋白酶的切割序列的详细描述可以参见,例如,József 
Figure PCTCN2022102194-appb-000001
Comparative Studies on Retroviral Proteases:Substrate Specificity[J].Viruses,2010,2(1):147-165。不受理论限制,在本申请的实施方案中,可以使用各种慢病毒蛋白酶切割序列,包括天然的HIV-1蛋白酶切割序列,以及人工设计或人工合成的慢病毒蛋白酶(例如,HIV-1蛋白酶)的切割序列。
In certain embodiments, the lentiviral protease is able to cleave polyproteins such as Gag and Gag-Pro-Pol at the site it recognizes, thereby converting unique morphologically immature virions into mature viruses. By analyzing the sequence of the lentiviral protease cleavage site, the cleavage sequences of natural lentiviral proteases (e.g., HIV-1 protease) are divided into two types: cleavage sequences with aromatic residues and proline residues. ; and, a cleavage sequence having hydrophobic residues but excluding proline residues. A detailed description of the cleavage sequences of lentiviral proteases can be found, e.g., József
Figure PCTCN2022102194-appb-000001
Comparative Studies on Retroviral Proteases:Substrate Specificity[J]. Viruses, 2010, 2(1):147-165. Without being limited by theory, in the embodiments of the present application, various lentiviral protease cleavage sequences can be used, including natural HIV-1 protease cleavage sequences, as well as artificially designed or artificially synthesized lentiviral proteases (e.g., HIV-1 protease ) cleavage sequence.
因此,在某些实施方案中,所述慢病毒蛋白酶的切割序列为具有芳香族残基和脯氨酸残基的切割序列。在某些实施方案中,所述慢病毒蛋白酶的切割序列为具有疏水性残基但不包括脯氨酸残基的切割序列。Thus, in certain embodiments, the cleavage sequence of the lentiviral protease is a cleavage sequence having aromatic residues and proline residues. In certain embodiments, the cleavage sequence of the lentiviral protease is a cleavage sequence having hydrophobic residues but excluding proline residues.
在某些优选的实施方案中,所述慢病毒蛋白酶的切割序列为SEQ ID NO:1或SEQ ID NO:3。In certain preferred embodiments, the cleavage sequence of the lentiviral protease is SEQ ID NO: 1 or SEQ ID NO: 3.
在某些实施方案中,所述融合抑制性R肽选自MLV包膜糖蛋白的融合抑制性R肽。在某些实施方案中,所述融合抑制性R肽具有如SEQ ID NO:6所示的氨基酸序列。In certain embodiments, the fusion-inhibiting R peptide is selected from the group consisting of fusion-inhibiting R peptides of MLV envelope glycoprotein. In certain embodiments, the fusion-inhibiting R peptide has the amino acid sequence set forth in SEQ ID NO: 6.
在某些实施方案中,所述MLV包膜糖蛋白的胞质尾结构域具有如SEQ ID NO:5所示的氨基酸序列。In certain embodiments, the cytoplasmic tail domain of the MLV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 5.
在某些实施方案中,所述经改造的胞质尾结构域具有如SEQ ID NO:42或SEQ ID NO: 43所示的氨基酸序列。In certain embodiments, the engineered cytoplasmic tail domain has the amino acid sequence set forth in SEQ ID NO: 42 or SEQ ID NO: 43.
在某些实施方案中,所述BaEV包膜糖蛋白的胞外结构域具有如SEQ ID NO:35所示的氨基酸序列。In certain embodiments, the extracellular domain of the BaEV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 35.
在某些实施方案中,所述BaEV包膜糖蛋白的跨膜结构域具有如SEQ ID NO:45所示的氨基酸序列。In certain embodiments, the transmembrane domain of the BaEV envelope glycoprotein has the amino acid sequence set forth in SEQ ID NO: 45.
在某些实施方案中,所述经改造的病毒包膜蛋白具有如SEQ ID NO:14或16所示的氨基酸序列。In certain embodiments, the engineered viral envelope protein has the amino acid sequence set forth in SEQ ID NO: 14 or 16.
在另一个方面,本申请涉及一种重组蛋白,其包含如上所述的经改造的病毒包膜蛋白,以及额外的肽段,所述额外的肽段连接至所述经改造的病毒包膜蛋白。In another aspect, the present application relates to a recombinant protein comprising an engineered viral envelope protein as described above, and additional peptide segments linked to the engineered viral envelope protein .
在本申请的重组蛋白中,所述额外的肽段可通过各种方式与所述经改造的病毒包膜蛋白相连接。例如,在某些优选的实施方案中,所述额外的肽段直接与所述经改造的病毒包膜蛋白连接。换言之,所述额外的肽段通过肽键直接与所述经改造的病毒包膜蛋白连接。在某些优选的实施方案中,所述额外的肽段通过接头连接至所述经改造的病毒包膜蛋白。合适的现有技术接头可以由重复的GGGGS氨基酸序列或其变体组成。例如,可使用具有氨基酸序列(GGGGS) 4的接头,但也可使用其变体(Holliger等人(1993),Proc.Natl.Acad.Sci.USA 90:6444-6448)。此外,还可使用其他接头,例如Alfthan等人(1995),Protein Eng.8:725-731;Choi等人(2001),Eur.J.Immunol.31:94-106;Hu等人(1996),Cancer Res.56:3055-3061;Kipriyanov等人(1999),J.Mol.Biol.293:41-56和Roovers等人(2001),Cancer Immunol.中描述的接头。 In the recombinant protein of the present application, the additional peptide segment can be connected to the modified viral envelope protein in various ways. For example, in certain preferred embodiments, the additional peptide segments are directly linked to the engineered viral envelope protein. In other words, the additional peptide segments are directly connected to the modified viral envelope protein through peptide bonds. In certain preferred embodiments, the additional peptide segments are linked to the engineered viral envelope protein via a linker. Suitable prior art linkers may consist of repeated GGGGS amino acid sequences or variants thereof. For example, a linker having the amino acid sequence (GGGGS) 4 can be used, but variants thereof can also be used (Holliger et al. (1993), Proc. Natl. Acad. Sci. USA 90:6444-6448). In addition, other linkers can also be used, such as Alfthan et al. (1995), Protein Eng. 8:725-731; Choi et al. (2001), Eur. J. Immunol. 31:94-106; Hu et al. (1996) , Cancer Res. 56:3055-3061; Kipriyanov et al. (1999), J. Mol. Biol. 293:41-56, and Roovers et al. (2001), Cancer Immunol.
在本申请的重组蛋白中,所述额外的肽段可连接至所述经改造的病毒包膜蛋白的任一末端。例如,在某些优选的实施方案中,所述额外的肽段连接至所述经改造的病毒包膜蛋白的N端。在某些优选的实施方案中,所述额外的肽段连接至所述经改造的病毒包膜蛋白的C端。In the recombinant protein of the present application, the additional peptide segment can be connected to any end of the modified viral envelope protein. For example, in certain preferred embodiments, the additional peptide is linked to the N-terminus of the engineered viral envelope protein. In certain preferred embodiments, the additional peptide is linked to the C-terminus of the engineered viral envelope protein.
根据本发明的重组蛋白可以包含一个或多个的额外肽段。例如,在某些优选的实施方案中,根据本发明的重组蛋白可以包含至少1个,至少2个,至少3个,至少5个或更多个额外的肽段。易于理解的是,这些肽段各自独立地可以以各种方式连接至所述经改造的病毒包膜蛋白的任一末端(N端或C端)。例如,在某些优选的实施方案中,本发明的重组蛋白可以包含两个额外的肽段,其中,一个额外的肽段通过接头或者不通过接头连接至所述经改造的病毒包膜蛋白的N端,并且,另一个额外的肽段通过接头或者不通过接头连接至所述经改造的病毒包膜蛋白的C端。在某些优选的实施方案中,本发明 的重组蛋白可以包含两个或者更多个额外的肽段,其中,所述两个或者更多个额外的肽段各自独立地通过接头或者不通过接头连接至所述经改造的病毒包膜蛋白的N端或C端。在某些优选的实施方案中,当两个或者更多个额外的肽段连接至经改造的病毒包膜蛋白的N端时,所述两个或者更多个额外的肽段可以以任何顺序串联,然后通过接头或者不通过接头连接至所述经改造的病毒包膜蛋白的N端。类似地,在某些优选的实施方案中,当两个或者更多个额外的肽段连接至经改造的病毒包膜蛋白的C端时,所述两个或者更多个额外的肽段可以以任何顺序串联,然后通过接头或者不通过接头连接至所述经改造的病毒包膜蛋白的C端。Recombinant proteins according to the invention may contain one or more additional peptide segments. For example, in certain preferred embodiments, the recombinant protein according to the present invention may comprise at least 1, at least 2, at least 3, at least 5 or more additional peptide segments. It is readily understood that each of these peptide segments independently can be linked to either terminus (N-terminus or C-terminus) of the engineered viral envelope protein in various ways. For example, in certain preferred embodiments, the recombinant protein of the present invention may comprise two additional peptide segments, wherein one additional peptide segment is connected to the modified viral envelope protein through a linker or not through a linker. N-terminus, and another additional peptide segment is connected to the C-terminus of the engineered viral envelope protein with or without a linker. In certain preferred embodiments, the recombinant protein of the present invention may comprise two or more additional peptide segments, wherein each of the two or more additional peptide segments independently passes through a linker or does not pass through a linker. Attached to the N-terminus or C-terminus of the engineered viral envelope protein. In certain preferred embodiments, when two or more additional peptide segments are linked to the N-terminus of the engineered viral envelope protein, the two or more additional peptide segments can be in any order. in series, and then connected to the N-terminus of the modified viral envelope protein through a linker or without a linker. Similarly, in certain preferred embodiments, when two or more additional peptide segments are linked to the C-terminus of the engineered viral envelope protein, the two or more additional peptide segments may concatenated in any order and then connected to the C-terminus of the engineered viral envelope protein with or without a linker.
可根据实际需要来选择合适的额外的肽段。例如,在某些优选的实施方案中,额外的肽段可以为信号肽。不受任何理论约束,通常认为,信号肽的使用可以促进重组蛋白的分泌,从而便于重组蛋白的回收。通常,此类信号肽可连接至经改造的病毒包膜蛋白的N端。此外,在分泌过程中或者分泌之后,信号肽可被切除,产生期望的经改造的病毒包膜蛋白或重组蛋白。Appropriate additional peptides can be selected according to actual needs. For example, in certain preferred embodiments, the additional peptide segments may be signal peptides. Without being bound by any theory, it is generally believed that the use of signal peptides can promote the secretion of recombinant proteins, thus facilitating the recovery of recombinant proteins. Typically, such signal peptides can be linked to the N-terminus of the engineered viral envelope protein. Additionally, during or after secretion, the signal peptide can be cleaved to produce the desired engineered viral envelope protein or recombinant protein.
在另一方面,本申请提供了一种多核苷酸,其包含编码如前所述的经改造的病毒包膜蛋白的核苷酸序列,或者如前所述的重组蛋白的核苷酸序列。In another aspect, the present application provides a polynucleotide comprising a nucleotide sequence encoding a modified viral envelope protein as described above, or a nucleotide sequence of a recombinant protein as described above.
在另一方面,本申请提供了一种载体,其包含如前所述的多核苷酸或如前所述的重组蛋白。In another aspect, the present application provides a vector comprising the polynucleotide as described above or the recombinant protein as described above.
在某些优选实施方案中,所述载体选自质粒,噬菌粒,柯斯质粒,病毒载体(例如逆转录酶病毒载体(例如慢病毒载体)、腺病毒载体)。In certain preferred embodiments, the vector is selected from plasmids, phagemids, cosmids, viral vectors (eg, retroviral vectors (eg, lentiviral vectors), adenoviral vectors).
通常来说,慢病毒是能够将大量病毒核酸传递到宿主细胞中的一类病毒。慢病毒的特征在于具有感染/转导非分裂期细胞的独特能力,并且,在转导后,慢病毒能够将其携带的核酸整合到宿主细胞的染色体中。因此,在某些优选实施方案中,所述载体是慢病毒载体。Generally speaking, lentivirus is a type of virus that can deliver large amounts of viral nucleic acid into host cells. Lentiviruses are characterized by their unique ability to infect/transduce non-dividing cells and, after transduction, are able to integrate the nucleic acids they carry into the chromosomes of the host cell. Thus, in certain preferred embodiments, the vector is a lentiviral vector.
慢病毒载体是本领域技术人员众所周知的,且特别在Naldini等人(2000)Adv.Virus.Res.55:599-609和Negre等人(2002)Biochimie84:1161-1171中描述。慢病毒通常含有编码毒力蛋白的三个主要基因gag,pol和env。在一些情况下,慢病毒还包括两个调控基因tat和rev。根据具体的病毒类型,慢病毒可能还有编码调节、合成和/或加工病毒核酸以及其他复制功能所涉及的蛋白质的其他基因。Lentiviral vectors are well known to those skilled in the art and are described inter alia in Naldini et al. (2000) Adv. Virus. Res. 55:599-609 and Negre et al. (2002) Biochimie 84:1161-1171. Lentivirus usually contains three major genes gag, pol and env that encode virulence proteins. In some cases, the lentivirus also includes two regulatory genes, tat and rev. Depending on the specific virus type, lentiviruses may also have additional genes encoding proteins involved in the regulation, synthesis, and/or processing of viral nucleic acid, as well as other replication functions.
因此,在某些优选实施方案中,所述载体还包含形成慢病毒颗粒所需的基因,例如 gag基因或其功能性变体和/或pol基因或其功能性变体。在某些优选实施方案中,所述载体还包含调控基因,例如tat基因或其功能性变体和/或rev基因或其功能性变体。Therefore, in certain preferred embodiments, the vector also contains genes required for the formation of lentiviral particles, such as the gag gene or functional variants thereof and/or the pol gene or functional variants thereof. In certain preferred embodiments, the vector also contains regulatory genes, such as tat genes or functional variants thereof and/or rev genes or functional variants thereof.
在某些优选实施方案中,所述载体还包含编码慢病毒蛋白酶的核苷酸序列。In certain preferred embodiments, the vector further comprises a nucleotide sequence encoding a lentiviral protease.
在某些优选实施方案中,所述慢病毒蛋白酶选自HIV(例如,HIV-1,HIV-2)的蛋白酶。In certain preferred embodiments, the lentiviral protease is selected from the group consisting of proteases of HIV (eg, HIV-1, HIV-2).
在某些优选实施方案中,所述慢病毒蛋白酶为HIV-1蛋白酶。In certain preferred embodiments, the lentiviral protease is HIV-1 protease.
在某些优选实施方案中,所述慢病毒蛋白酶能够识别并切割所述经改造的胞质尾结构域中的所述慢病毒蛋白酶的切割序列。In certain preferred embodiments, the lentiviral protease is capable of recognizing and cleaving the cleavage sequence of the lentiviral protease in the engineered cytoplasmic tail domain.
在另一方面,本申请提供了一种宿主细胞,其包含如前所述的多核苷酸或者如前所述的载体。此类宿主细胞包括但不限于,原核细胞例如大肠杆菌细胞,以及真核细胞例如酵母细胞,昆虫细胞,植物细胞和动物细胞(如哺乳动物细胞,例如小鼠细胞、人细胞等)。本发明的宿主细胞还可以是细胞系,例如293T细胞。不受任何理论约束,通常认为,真核细胞的使用有助于维持蛋白的正确构象,促进蛋白的折叠。因此,在某些优选的实施方案中,本发明的宿主细胞是真核细胞例如人细胞。在某些实施方案中,本发明的宿主细胞可以是免疫细胞,例如B细胞,T细胞,NK细胞。In another aspect, the present application provides a host cell comprising the polynucleotide as described above or the vector as described above. Such host cells include, but are not limited to, prokaryotic cells such as E. coli cells, and eukaryotic cells such as yeast cells, insect cells, plant cells, and animal cells (such as mammalian cells, such as mouse cells, human cells, etc.). The host cell of the invention can also be a cell line, such as 293T cells. Without being bound by any theory, it is generally believed that the use of eukaryotic cells helps maintain the correct conformation of proteins and promotes protein folding. Thus, in certain preferred embodiments, the host cells of the invention are eukaryotic cells, such as human cells. In certain embodiments, host cells of the invention can be immune cells, such as B cells, T cells, NK cells.
在另一方面,本申请提供了制备如前所述的经改造的病毒包膜蛋白的方法,其包括,在允许蛋白表达的条件下培养如前所述的宿主细胞。在某些优选实施方案中,所述方法还包括,回收所述宿主细胞表达的经改造的病毒包膜蛋白。In another aspect, the present application provides a method for preparing the modified viral envelope protein as described above, which includes culturing the host cell as described above under conditions that allow protein expression. In certain preferred embodiments, the method further includes recovering the engineered viral envelope protein expressed by the host cell.
在另一方面,本申请提供了一种假型化病毒样颗粒,其包含如前所述的经改造的病毒包膜蛋白。In another aspect, the present application provides a pseudotyped virus-like particle comprising a modified viral envelope protein as described above.
在某些优选的实施方案中,所述假型化病毒样颗粒进一步包含生物材料。In certain preferred embodiments, the pseudotyped virus-like particles further comprise biological material.
在某些优选的实施方案中,所述生物材料涉及易于改变细胞的结构和/或功能的一种或多种化合物。优选地,所述生物材料是一种或多种核酸,在慢病毒载体颗粒的情况下,其可以包含在载体颗粒的基因组内。基因组通常包含一种或多种核酸,其优选连接至对于其在靶细胞中表达所需的基因元件,诸如启动子和终止子,侧翼为对于在核心元件中包括基因组、其逆转录成脱氧核糖核酸(DNA)、逆转录的基因组输入靶细胞的核和逆转录的基因组整合在靶细胞的基因组内所需的顺式作用元件。In certain preferred embodiments, the biomaterial involves one or more compounds that tend to alter the structure and/or function of the cell. Preferably, the biological material is one or more nucleic acids, which in the case of lentiviral vector particles may be contained within the genome of the vector particle. The genome typically contains one or more nucleic acids, preferably linked to genetic elements required for its expression in target cells, such as promoters and terminators, flanked by, for inclusion in the core element, the genome, its reverse transcription to deoxyribose The nucleic acid (DNA) and the reverse-transcribed genome are imported into the nucleus of the target cell and the cis-acting elements required for the integration of the reverse-transcribed genome into the genome of the target cell.
在某些优选实施方案中,所述假型化病毒样颗粒为慢病毒病毒样颗粒(例如HIV病 毒样颗粒或SIV病毒样颗粒)。In certain preferred embodiments, the pseudotyped virus-like particles are lentiviral virus-like particles (e.g., HIV virus-like particles or SIV virus-like particles).
在某些优选实施方案中,所述假型化病毒样颗粒还包含(例如包装有)目的核酸分子。In certain preferred embodiments, the pseudotyped virus-like particles further comprise (eg, are packaged with) a nucleic acid molecule of interest.
在某些优选实施方案中,所述目的核酸分子包含目的基因。在某些优选实施方案中,所述目的基因编码目的蛋白(例如,嵌合抗原受体)。In certain preferred embodiments, the nucleic acid molecule of interest comprises a gene of interest. In certain preferred embodiments, the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor).
在某些优选实施方案中,所述嵌合抗原受体包含抗原结合结构域,跨膜区和胞内区。In certain preferred embodiments, the chimeric antigen receptor comprises an antigen-binding domain, a transmembrane region and an intracellular region.
在某些优选实施方案中,所述抗原结合结构域包含能够特异性结合抗原(例如肿瘤抗原,例如B细胞成熟抗原(BCMA))的重链可变区和轻链可变区;优选地,所述抗原结合结构域是scFv。In certain preferred embodiments, the antigen-binding domain comprises a heavy chain variable region and a light chain variable region capable of specifically binding an antigen, such as a tumor antigen, such as a B cell maturation antigen (BCMA); preferably, The antigen binding domain is a scFv.
在某些优选实施方案中,所述重链可变区的氨基酸序列为SEQ ID NO:20。In certain preferred embodiments, the amino acid sequence of the heavy chain variable region is SEQ ID NO: 20.
在某些优选实施方案中,所述轻链可变区的氨基酸序列为SEQ ID NO:22。In certain preferred embodiments, the amino acid sequence of the light chain variable region is SEQ ID NO: 22.
在某些优选实施方案中,所述跨膜区包含CD8的跨膜结构域。In certain preferred embodiments, the transmembrane region comprises the transmembrane domain of CD8.
在某些优选实施方案中,述胞内区包含CD137(也称为4-1BB)的胞内信号结构域和/或CD3ζ的胞内信号结构域。In certain preferred embodiments, the intracellular region comprises the intracellular signaling domain of CD137 (also known as 4-1BB) and/or the intracellular signaling domain of CD3ζ.
在某些优选实施方案中,所述嵌合抗原受体包含抗BCMA的scFv,CD8的铰链区,CD8的跨膜结构域,CD137的胞内信号结构域和CD3ζ的胞内信号结构域。在某些优选实施方案中,所述嵌合抗原受体还包含IL-15,其例如可以通过自剪切多肽P2A与所述CD3ζ的胞内信号结构域相连接。在某些优选实施方案中,所述嵌合抗原受体具有如SEQ ID NO:40所示的氨基酸序列。In certain preferred embodiments, the chimeric antigen receptor comprises an anti-BCMA scFv, a hinge region of CD8, a transmembrane domain of CD8, an intracellular signaling domain of CD137 and an intracellular signaling domain of CD3ζ. In certain preferred embodiments, the chimeric antigen receptor further comprises IL-15, which can be linked to the intracellular signaling domain of CD3ζ, for example, via the self-cleaving polypeptide P2A. In certain preferred embodiments, the chimeric antigen receptor has the amino acid sequence shown in SEQ ID NO: 40.
在一些实施方案中,本文所述的假型化病毒样颗粒能够表达白介素15(IL-15)。当然,本文所述的假型化病毒样颗粒也可包含其他的细胞因子,包括例如,IL-2、IL-18、IL-23和IL-36。In some embodiments, the pseudotyped virus-like particles described herein are capable of expressing interleukin 15 (IL-15). Of course, the pseudotyped virus-like particles described herein may also contain other cytokines, including, for example, IL-2, IL-18, IL-23, and IL-36.
在另一方面,本申请提供了制备如前所述的假型化病毒样颗粒的方法,其包括:In another aspect, the present application provides a method for preparing pseudotyped virus-like particles as previously described, comprising:
(a)用下述物质转染宿主细胞:(a) Transfect host cells with:
(1)编码如前所述的经改造的病毒包膜蛋白的第一核酸分子;(1) The first nucleic acid molecule encoding the modified viral envelope protein as described above;
(2)含有形成慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)所需的基因或元件的一个或多个辅助核酸分子;和(2) One or more accessory nucleic acid molecules containing genes or elements required for the formation of lentiviral virus-like particles (e.g., HIV virus-like particles or SIV virus-like particles); and
(3)任选地,包含目的基因的目的核酸分子;(3) Optionally, a target nucleic acid molecule containing a target gene;
(b)在允许蛋白表达的条件下培养所述宿主细胞,以产生假型化病毒样颗粒。(b) Culturing the host cell under conditions permissive for protein expression to produce pseudotyped virus-like particles.
在某些优选实施方案中,所述一个或多个辅助核酸分子可包含gag基因和pol基因。In certain preferred embodiments, the one or more accessory nucleic acid molecules may comprise a gag gene and a pol gene.
在某些优选实施方案中,所述目的基因编码目的蛋白(例如,嵌合抗原受体)。易于理解,上文对于嵌合抗原受体所描述的各种特征同样适用于此处。In certain preferred embodiments, the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor). It will be readily understood that various features described above for chimeric antigen receptors also apply here.
在某些优选实施方案中,所述细胞为哺乳动物(例如,人)的细胞;优选地,所述细胞为293T细胞。In certain preferred embodiments, the cells are mammalian (eg, human) cells; preferably, the cells are 293T cells.
假型化病毒样颗粒可以容易地由本领域技术人员根据现有技术制备,例如,通过遵循由Sandrin等人(2002)Blood100:823-832提供的通用指导来制备。在某些优选实施方案中,所述辅助核酸分子中的一个或多个基因或元件可以承载于相同或不同的载体中,例如,1个,2个,3个,或更多更载体中。Pseudotyped virus-like particles can be readily prepared by one skilled in the art according to the state of the art, for example by following the general guidance provided by Sandrin et al. (2002) Blood 100:823-832. In certain preferred embodiments, one or more genes or elements in the auxiliary nucleic acid molecules can be carried in the same or different vectors, for example, 1, 2, 3, or more vectors.
在另一方面,本申请提供了一种免疫细胞,其包含或感染了如前所述的假型化病毒样颗粒。In another aspect, the application provides an immune cell comprising or infected with a pseudotyped virus-like particle as described above.
在某些优选实施方案中,所述免疫细胞为哺乳动物(例如,人)的免疫细胞(例如,T细胞,B细胞,NK细胞)。In certain preferred embodiments, the immune cells are mammalian (eg, human) immune cells (eg, T cells, B cells, NK cells).
在某些优选实施方案中,所述免疫细胞为NK细胞。In certain preferred embodiments, the immune cells are NK cells.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自如前所述的经改造的病毒包膜蛋白。In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a modified viral envelope protein selected from the group consisting of those described above.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自如前所述的多核苷酸。In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a polynucleotide selected from the group consisting of those described above.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自如前所述的载体。In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a carrier selected from the group consisting of those described above.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自如前所述的假型化病毒样颗粒。In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and pseudotyped virus-like particles selected from the group consisting of those described above.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自如前所述的免疫细胞。In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and immune cells selected from the group consisting of those described above.
在另一方面,本申请提供了一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自下述中的多项:In another aspect, the present application provides a pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and a plurality selected from the following:
(1)如前所述的经改造的病毒包膜蛋白;(1) The modified viral envelope protein as described above;
(2)如前所述的多核苷酸;(2) Polynucleotide as described above;
(3)如前所述的载体;(3) The carrier as mentioned above;
(4)如前所述的假型化病毒样颗粒;和(4) Pseudotyped virus-like particles as described above; and
(5)如前所述的免疫细胞。(5) Immune cells as described above.
在另一方面,本申请提供了一种试剂盒,其包含,编码如前所述的经改造的病毒包膜蛋白的第一核酸分子。In another aspect, the present application provides a kit comprising a first nucleic acid molecule encoding the modified viral envelope protein as described above.
在某些优选实施方案中,所述试剂盒还包含,含有形成慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)所需的基因或元件的一个或多个辅助核酸分子。在某些优选实施方案中,所述一个或多个辅助核酸分子包含gag基因或其功能性变体和/或pol基因或其功能性变体。在某些优选实施方案中,所述一个或多个辅助核酸分子包含gag基因和/或pol基因。在某些优选实施方案中,所述一个或多个辅助核酸分子还包含tat基因或其功能性变体和/或rev基因或其功能性变体。在某些优选实施方案中,所述一个或多个辅助核酸分子还包含编码慢病毒蛋白酶的核苷酸序列。在某些优选实施方案中,所述慢病毒蛋白酶能够识别并切割所述经改造的胞质尾结构域中的所述慢病毒蛋白酶的切割序列。In certain preferred embodiments, the kit further comprises one or more accessory nucleic acid molecules containing genes or elements required for the formation of lentiviral virus-like particles (eg, HIV virus-like particles or SIV virus-like particles). In certain preferred embodiments, the one or more auxiliary nucleic acid molecules comprise the gag gene or functional variants thereof and/or the pol gene or functional variants thereof. In certain preferred embodiments, the one or more accessory nucleic acid molecules comprise gag genes and/or pol genes. In certain preferred embodiments, the one or more auxiliary nucleic acid molecules further comprise a tat gene or a functional variant thereof and/or a rev gene or a functional variant thereof. In certain preferred embodiments, the one or more accessory nucleic acid molecules further comprise a nucleotide sequence encoding a lentiviral protease. In certain preferred embodiments, the lentiviral protease is capable of recognizing and cleaving the cleavage sequence of the lentiviral protease in the engineered cytoplasmic tail domain.
在某些优选实施方案中,所述试剂盒还含有,包含目的基因的目的核酸分子。在某些优选实施方案中,所述目的基因编码目的蛋白(例如,嵌合抗原受体)。In certain preferred embodiments, the kit further contains a nucleic acid molecule of interest comprising a gene of interest. In certain preferred embodiments, the gene of interest encodes a protein of interest (eg, a chimeric antigen receptor).
在某些优选实施方案中,所述试剂盒还包含用于将核酸分子转移入宿主细胞中的试剂,和/或,用于插入核酸分子的载体。在某些优选实施方案中,所述宿主细胞为哺乳动物(例如,人)的细胞。在某些优选实施方案中,所述宿主细胞为293T细胞。在某些优选实施方案中,所述试剂盒还包含宿主细胞。In certain preferred embodiments, the kit further comprises reagents for transferring the nucleic acid molecule into the host cell, and/or, a vector for inserting the nucleic acid molecule. In certain preferred embodiments, the host cell is a mammalian (eg, human) cell. In certain preferred embodiments, the host cell is a 293T cell. In certain preferred embodiments, the kit further comprises a host cell.
在某些优选实施方案中,所述一个或多个辅助核酸分子包含于相同的载体或不同的载体中,例如,1个,2个,3个,或更多个载体中。In certain preferred embodiments, the one or more accessory nucleic acid molecules are contained in the same vector or different vectors, for example, 1, 2, 3, or more vectors.
在某些优选实施方案中,所述一个或多个辅助核酸分子与所述第一核酸分子包含于相同的载体或不同的载体中,例如,1个,2个,3个,或更多个载体中。In certain preferred embodiments, the one or more auxiliary nucleic acid molecules and the first nucleic acid molecule are contained in the same vector or different vectors, for example, 1, 2, 3, or more in the carrier.
在另一方面,本申请提供了如前所述的经改造的病毒包膜蛋白,或者如前所述的多核苷酸,或者如前所述的载体,或者如前所述的假型化病毒样颗粒,或者如前所述的免疫细胞在制备药物中的用途,所述药物用于在受试者中预防和/或治疗疾病。On the other hand, the present application provides a modified viral envelope protein as described above, or a polynucleotide as described above, or a vector as described above, or a pseudotyped virus as described above The use of similar particles, or immune cells as described above, in the preparation of medicaments for preventing and/or treating diseases in a subject.
在某些优选实施方案中,所述疾病是能够被所述目的核酸分子预防或治疗的疾病。 在某些优选实施方案中,所述假型化病毒样颗粒中包含(包装)的目的核酸分子对所述疾病具有预防或治疗效果。因此,可以根据待预防或治疗的疾病来选择包含(包装)于假型化病毒样颗粒中的目的核酸分子。例如,当待预防或治疗的疾病的是肿瘤时,所述目的核酸分子可以是抗肿瘤基因,例如编码嵌合抗原受体(CAR)的基因。类似地,当待预防或治疗的疾病的是炎性疾病时,所述目的核酸分子可以是抗炎基因,例如编码抗炎因子(例如白介素)的基因。In certain preferred embodiments, the disease is a disease that can be prevented or treated by the nucleic acid molecule of interest. In certain preferred embodiments, the nucleic acid molecule of interest contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease. Therefore, the nucleic acid molecules of interest contained (packaged) in pseudotyped virus-like particles can be selected according to the disease to be prevented or treated. For example, when the disease to be prevented or treated is a tumor, the nucleic acid molecule of interest may be an anti-tumor gene, such as a gene encoding a chimeric antigen receptor (CAR). Similarly, when the disease to be prevented or treated is an inflammatory disease, the nucleic acid molecule of interest may be an anti-inflammatory gene, such as a gene encoding an anti-inflammatory factor (eg, interleukin).
在某些优选实施方案中,所述疾病选自病毒感染、细菌感染、肿瘤、炎性疾病和自身免疫性疾病。In certain preferred embodiments, the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases, and autoimmune diseases.
在某些优选实施方案中,药物还包含另外的药学活性剂。可以根据待预防或治疗的疾病来选择另外的药学活性剂。例如,当待预防或治疗的疾病的是肿瘤时,所述另外的药学活性剂是具有抗肿瘤活性的药物。In certain preferred embodiments, the medicament also contains an additional pharmaceutically active agent. Additional pharmaceutically active agents may be selected depending on the disease to be prevented or treated. For example, when the disease to be prevented or treated is a tumor, the additional pharmaceutically active agent is a drug with anti-tumor activity.
在某些优选实施方案中,所述另外的药学活性剂是具有抗肿瘤活性的药物,例如烷化剂、有丝分裂抑制剂、抗肿瘤抗生素、抗代谢物、拓扑异构酶抑制剂、酪氨酸激酶抑制剂、放射性核素剂、放射增敏剂、抗血管生成剂、细胞因子、分子靶向药物、免疫检查点抑制剂或溶瘤病毒。In certain preferred embodiments, the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitotic inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine Kinase inhibitors, radionuclide agents, radiosensitizers, anti-angiogenic agents, cytokines, molecularly targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
在某些优选实施方案中,所述受试者为哺乳动物,例如人。In certain preferred embodiments, the subject is a mammal, such as a human.
在某些优选的实施方案中,所述药物还包含药学可接受的载体,赋形剂,稳定剂或能够为所述药物的施用(例如施用给人受试者)提供有利性质的其他试剂。合适的药物载体包括例如,无菌水,盐水,葡萄糖,蓖麻油和环氧乙烷的缩合产物,液体酸,低级醇(例如C1-4醇),油(例如玉米油,花生油,芝麻油;其任选还包含乳化剂例如脂肪酸的单-或二-甘油酯或磷脂例如卵磷脂),乙二醇,聚亚烷基二醇,藻酸钠,聚(乙烯基吡咯烷酮)等等。所述载体任选地还可包含佐剂,防腐剂,稳定剂,润湿剂,乳化剂,渗透增强剂等。In certain preferred embodiments, the medicament further comprises a pharmaceutically acceptable carrier, excipient, stabilizer or other agent capable of providing beneficial properties for administration of the medicament (eg, to a human subject). Suitable pharmaceutical carriers include, for example, sterile water, saline, dextrose, condensation products of castor oil and ethylene oxide, liquid acids, lower alcohols (e.g., C1-4 alcohols), oils (e.g., corn oil, peanut oil, sesame oil; Optionally also included are emulsifiers such as mono- or diglycerides of fatty acids or phospholipids such as lecithin), ethylene glycol, polyalkylene glycols, sodium alginate, poly(vinylpyrrolidone) and the like. The carrier optionally may also contain adjuvants, preservatives, stabilizers, wetting agents, emulsifiers, penetration enhancers and the like.
在另一方面,本申请提供了如前所述的包膜蛋白用于制备假型化病毒样颗粒的用途。In another aspect, the present application provides the use of an envelope protein as previously described for preparing pseudotyped virus-like particles.
在某些优选实施方案中,所述假型化病毒样颗粒能够感染免疫细胞(例如,T细胞,B细胞,NK细胞)。In certain preferred embodiments, the pseudotyped virus-like particles are capable of infecting immune cells (eg, T cells, B cells, NK cells).
在某些优选实施方案中,所述假型化病毒样颗粒为慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)。In certain preferred embodiments, the pseudotyped virus-like particles are lentiviral virus-like particles (eg, HIV virus-like particles or SIV virus-like particles).
在另一方面,本申请提供了如前所述的假型化病毒样颗粒用于将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的用途或用于制备将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的药物的用途。In another aspect, the present application provides the use of pseudotyped virus-like particles as previously described for transferring nucleic acid molecules of interest to immune cells (e.g., T cells, B cells, NK cells) or for preparing The use of drugs that transfer nucleic acid molecules of interest to immune cells (e.g., T cells, B cells, NK cells).
在某些优选实施方案中,所述目的核酸分子包含在载体中。In certain preferred embodiments, the nucleic acid molecule of interest is contained in a vector.
在某些优选实施方案中,所述目的核酸分子编码目的蛋白,例如嵌合抗原受体。In certain preferred embodiments, the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor.
在另一方面,本申请提供了一种将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的方法,其包括,用如前所述的假型化病毒样颗粒感染所述免疫细胞,其中,所述假型化病毒样颗粒包含(包装有)所述目的核酸分子。In another aspect, the present application provides a method of transferring a nucleic acid molecule of interest into immune cells (e.g., T cells, B cells, NK cells), which method includes using pseudotyped virus-like particles as described above. The immune cell is infected, wherein the pseudotyped virus-like particle contains (packages) the nucleic acid molecule of interest.
在某些优选实施方案中,所述目的核酸分子包含在载体中。In certain preferred embodiments, the nucleic acid molecule of interest is contained in a vector.
在某些优选实施方案中,所述目的核酸分子编码目的蛋白,例如嵌合抗原受体。In certain preferred embodiments, the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor.
在某些优选实施方案中,所述方法在体外,离体或在体内进行。In certain preferred embodiments, the methods are performed in vitro, ex vivo or in vivo.
在另一方面,本申请提供了一种预防或治疗受试者的疾病的方法,所述方法包括向所述受试者施用预防或治疗有效量的如前所述的假型化病毒样颗粒或如前所述的免疫细胞或如前所述的药物组合物或如前所述的试剂盒。In another aspect, the present application provides a method of preventing or treating a disease in a subject, the method comprising administering to the subject a prophylactically or therapeutically effective amount of a pseudotyped virus-like particle as described above Or the immune cells as mentioned above or the pharmaceutical composition as mentioned above or the kit as mentioned above.
在某些优选实施方案中,所述疾病是能够被所述目的核酸分子预防或治疗的疾病。在某些优选实施方案中,所述假型化病毒样颗粒中包含(包装)的目的核酸分子对所述疾病具有预防或治疗效果。因此,可以根据待预防或治疗的疾病来选择包含(包装)于假型化病毒样颗粒中的目的核酸分子。例如,当待预防或治疗的疾病的是肿瘤时,所述目的核酸分子可以是抗肿瘤基因,例如编码嵌合抗原受体(CAR)的基因。类似地,当待预防或治疗的疾病的是炎性疾病时,所述目的核酸分子可以是抗炎基因,例如编码抗炎因子(例如白介素)的基因。In certain preferred embodiments, the disease is a disease that can be prevented or treated by the nucleic acid molecule of interest. In certain preferred embodiments, the nucleic acid molecule of interest contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease. Therefore, the nucleic acid molecules of interest contained (packaged) in pseudotyped virus-like particles can be selected according to the disease to be prevented or treated. For example, when the disease to be prevented or treated is a tumor, the nucleic acid molecule of interest may be an anti-tumor gene, such as a gene encoding a chimeric antigen receptor (CAR). Similarly, when the disease to be prevented or treated is an inflammatory disease, the nucleic acid molecule of interest may be an anti-inflammatory gene, such as a gene encoding an anti-inflammatory factor (eg, interleukin).
在某些优选实施方案中,所述疾病选自病毒感染、细菌感染、肿瘤、炎性疾病和自身免疫性疾病。In certain preferred embodiments, the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases, and autoimmune diseases.
在某些优选实施方案中,所述受试者为哺乳动物,例如人。In certain preferred embodiments, the subject is a mammal, such as a human.
在某些优选实施方案中,所述方法还包括,对所述受试者施用另外的药学活性剂。可以根据待预防或治疗的疾病来选择另外的药学活性剂。例如,当待预防或治疗的疾病的是肿瘤时,所述另外的药学活性剂是具有抗肿瘤活性的药物。在某些优选实施方案中,所述另外的药学活性剂是具有抗肿瘤活性的药物,例如烷化剂、有丝分裂抑制剂、 抗肿瘤抗生素、抗代谢物、拓扑异构酶抑制剂、酪氨酸激酶抑制剂、放射性核素剂、放射增敏剂、抗血管生成剂、细胞因子、分子靶向药物、免疫检查点抑制剂或溶瘤病毒。In certain preferred embodiments, the methods further comprise administering to the subject an additional pharmaceutically active agent. Additional pharmaceutically active agents may be selected depending on the disease to be prevented or treated. For example, when the disease to be prevented or treated is a tumor, the additional pharmaceutically active agent is a drug with anti-tumor activity. In certain preferred embodiments, the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitosis inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine Kinase inhibitors, radionuclide agents, radiosensitizers, anti-angiogenic agents, cytokines, molecularly targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
术语定义Definition of Terms
在本发明中,除非另有说明,否则本文中使用的科学和技术名词具有本领域技术人员所通常理解的含义。并且,本文中所用的分子遗传学、核酸化学、化学、分子生物学、生物化学、细胞培养、微生物学、细胞生物学、基因组学和重组DNA等操作步骤均为相应领域内广泛使用的常规步骤。同时,为了更好地理解本发明,下面提供相关术语的定义和解释。In the present invention, unless otherwise stated, scientific and technical terms used herein have the meanings commonly understood by those skilled in the art. Moreover, the procedures used in this article such as molecular genetics, nucleic acid chemistry, chemistry, molecular biology, biochemistry, cell culture, microbiology, cell biology, genomics and recombinant DNA are routine procedures widely used in the corresponding fields. . Meanwhile, in order to better understand the present invention, definitions and explanations of relevant terms are provided below.
如本文中所使用的,术语“野生的”或“天然的”可互换地使用。当这些术语用于描述核酸分子、多肽或蛋白时,其表示该核酸分子、多肽或蛋白在自然界中存在,发现于自然界,并且未经过人工的任何修饰或加工。As used herein, the terms "wild" or "natural" are used interchangeably. When these terms are used to describe a nucleic acid molecule, polypeptide or protein, it means that the nucleic acid molecule, polypeptide or protein exists in nature, is found in nature, and has not undergone any artificial modification or processing.
如本文中所使用的,术语“病毒样颗粒”,“假病毒颗粒”和“类病毒颗粒”具有相同的含义,可互换使用。术语“病毒样颗粒”具体是指,由病毒蛋白自组装形成的一种类似于病毒的颗粒,其不包裹核酸或者包裹了其他核酸,从而,所述病毒样颗粒虽然能够感染宿主细胞,但不具有自主复制能力。因此,与真正的病毒相比,其生物安全性高。As used herein, the terms "virus-like particles," "pseudovirus particles," and "virus-like particles" have the same meaning and may be used interchangeably. The term "virus-like particle" specifically refers to a virus-like particle formed by the self-assembly of viral proteins, which does not encapsulate nucleic acid or encapsulates other nucleic acids. Therefore, although the virus-like particle can infect host cells, it cannot infect host cells. Have the ability to replicate autonomously. Therefore, its biosafety is high compared to real viruses.
在本申请中,病毒样颗粒可以选自癌病毒的病毒样颗粒,例如鼠白血病病毒(MLV)、禽白血病病毒(ALV)、呼吸道合胞病毒(RSV)或Mason-Pfizer猴病毒(MPMV)的病毒样颗粒;慢病毒的病毒样颗粒,例如人免疫缺陷病毒(HIV,例如HIV-1或HIV-2)、猴免疫缺陷病毒(SIV)、猫免疫缺陷病毒(FIV)或马感染性贫血病毒(EIAV)的病毒样颗粒;和泡沫病毒的病毒样颗粒,诸如人泡沫病毒(HFV)病毒样颗粒。In the present application, the virus-like particles may be selected from virus-like particles of oncoviruses, such as murine leukemia virus (MLV), avian leukemia virus (ALV), respiratory syncytial virus (RSV) or Mason-Pfizer monkey virus (MPMV). Virus-like particles; virus-like particles of a lentivirus, such as human immunodeficiency virus (HIV, e.g., HIV-1 or HIV-2), simian immunodeficiency virus (SIV), feline immunodeficiency virus (FIV), or equine infectious anemia virus (EIAV) virus-like particles; and virus-like particles of foamy viruses, such as human foamy virus (HFV) virus-like particles.
慢病毒的病毒样颗粒是本领域技术人员众所周知的,且特别在Naldini等人(2002)Adv.Virus.Res.55:599-609和Negre等人(2002)Biochimie 84:1161-1171中有所描述。通常,慢病毒病毒样颗粒至少包含以下组分:(i)包膜组分,其由与包膜蛋白结合的磷脂双分子层构成,所述包膜环绕(ii)由gag蛋白结合构成的核心组分,所述核心本身环绕(iii)通常由核糖核酸(RNA)构成的基因组组分和(iv)酶组分(pol)。Lentiviral virus-like particles are well known to those skilled in the art and are described in particular in Naldini et al. (2002) Adv.Virus.Res.55:599-609 and Negre et al. (2002) Biochimie 84:1161-1171 describe. Typically, lentiviral virus-like particles comprise at least the following components: (i) an envelope component consisting of a phospholipid bilayer bound to an envelope protein surrounding (ii) a core composed of bound gag proteins components, the core itself surrounding (iii) a genomic component usually consisting of ribonucleic acid (RNA) and (iv) an enzyme component (pol).
慢病毒病毒样颗粒可以容易地由本领域技术人员,例如,通过遵循由Sandrin等人(2002)Blood 100:823-832提供的通用指导来制备。简而言之,慢病毒病毒样 颗粒可通过在宿主细胞(例如293T细胞)中共表达形成慢病毒病毒样颗粒所需的组分(包括包膜组分,核心组分、基因组组分和酶组分)来生成。通常可以采用3至4种质粒来制备慢病毒病毒样颗粒,但质粒的数目可以根据实际需要(例如慢病毒组分的排列组合)而变化。Lentiviral virus-like particles can be readily prepared by one skilled in the art, for example, by following the general guidance provided by Sandrin et al. (2002) Blood 100:823-832. Briefly, lentiviral virus-like particles can be formed by co-expressing in host cells (such as 293T cells) the components required to form lentiviral virus-like particles (including envelope components, core components, genome components and enzyme groups). points) to generate. Generally, 3 to 4 plasmids can be used to prepare lentiviral virus-like particles, but the number of plasmids can vary according to actual needs (such as the permutation and combination of lentiviral components).
例如,在本发明的一个示例性实施方案中,采用3种质粒来制备慢病毒病毒样颗粒,其中,一个质粒含有编码包膜蛋白的核苷酸序列(称为“包膜质粒”),另一个质粒含有携带外源目的基因(目的核酸分子)的基因组组分(称为“核心质粒”),再一个质粒含有编码其他必需组分(例如,gag蛋白和pol蛋白)的核苷酸序列(称为“辅助质粒”)。用上述核心质粒、包膜质粒和辅助质粒共转染细胞,然后在细胞中进行假病毒颗粒的包装,随后包装好的假病毒颗粒分泌到细胞外的培养基中,由此,可产生高滴度的假病毒颗粒。For example, in an exemplary embodiment of the present invention, 3 plasmids are used to prepare lentiviral virus-like particles, wherein one plasmid contains a nucleotide sequence encoding an envelope protein (referred to as an "envelope plasmid"), and the other plasmid One plasmid contains the genomic component (called the "core plasmid") carrying the exogenous target gene (target nucleic acid molecule), and the other plasmid contains the nucleotide sequence (e.g., gag protein and pol protein) encoding other essential components (e.g., gag protein and pol protein). called "helper plasmid"). Cells are co-transfected with the above-mentioned core plasmid, envelope plasmid and helper plasmid, and then the pseudoviral particles are packaged in the cells, and then the packaged pseudoviral particles are secreted into the extracellular culture medium, thus producing high droplet fake virus particles.
此类核心质粒、包膜质粒或辅助质粒是本领域技术人员熟知的,例如,以HIV-1为基础构建的辅助质粒包括但不限于,pSG3.Δenv(Wei X等人,Antibody neutralization and escape by HIV-1.Nature 422:307-312,2003)和NL4-3.Fluc.R-.E-(Connor RI,等人,Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes.Virology 206:935–944,1995)。Such core plasmids, envelope plasmids or auxiliary plasmids are well known to those skilled in the art. For example, auxiliary plasmids constructed based on HIV-1 include, but are not limited to, pSG3.Δenv (Wei X et al., Antibody neutralization and escape by HIV-1.Nature 422:307-312, 2003) and NL4-3.Fluc.R-.E-(Connor RI, et al., Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes.Virology 206:935–944, 1995).
如本文中所使用的,表述“含有形成慢病毒病毒样颗粒所需的基因或元件的一个或多个辅助核酸分子”将包括,除了编码包膜蛋白的基因之外的所有必需基因或元件,例如基因组组分,编码gag蛋白的基因,编码pol蛋白的基因等。As used herein, the expression "one or more accessory nucleic acid molecules containing genes or elements required for the formation of lentiviral virus-like particles" will include, except for genes encoding envelope proteins, all necessary genes or elements, For example, genome components, genes encoding gag proteins, genes encoding pol proteins, etc.
如本文中所使用的,术语“假型化病毒样颗粒”是指包含外来病毒包膜糖蛋白的病毒样颗粒。通常,根据本发明的病毒样颗粒用上文定义的经改造的病毒包膜蛋白假型化。As used herein, the term "pseudotyped virus-like particles" refers to virus-like particles that contain foreign viral envelope glycoproteins. Typically, virus-like particles according to the invention are pseudotyped with engineered viral envelope proteins as defined above.
狒狒内源性病毒(也称为“狒狒内源性逆转录病毒”,BaEV)是以多个前病毒拷贝存在于狒狒DNA中的C型逆转录病毒。BaEV包膜糖蛋白特别地在Benveniste等人(1974)Nature248:17-20和Todaro等人(1974)Cell2:55-61中描述。Baboon endogenous virus (also known as "baboon endogenous retrovirus", BaEV) is a type C retrovirus that exists as multiple proviral copies in baboon DNA. BaEV envelope glycoproteins are described inter alia in Benveniste et al. (1974) Nature 248: 17-20 and Todaro et al. (1974) Cell 2: 55-61.
如本文中所使用的,术语“BaEV包膜糖蛋白”意欲包括BaEV包膜糖蛋白的野生型形式或与所述野生型BaEV包膜糖蛋白具有至少85%、优选至少90%、更优选至少95%、还更优选至少99%同一性的所述野生型BaEV包膜糖蛋白的突变体,所述突变体糖蛋白保留野生型糖蛋白结合细胞膜并与细胞膜融合的能力。As used herein, the term "BaEV envelope glycoprotein" is intended to include the wild-type form of the BaEV envelope glycoprotein or to be at least 85% identical to said wild-type BaEV envelope glycoprotein, preferably at least 90%, more preferably at least A mutant of the wild-type BaEV envelope glycoprotein that is 95%, still more preferably at least 99%, identical and retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
天然的BaEV包膜糖蛋白的序列在公共数据库中可以查到,例如,SEQ ID NO:44所示的氨基酸序列。如本文中所使用的,当提及BaEV包膜糖蛋白的氨基酸序列时,其使用SEQ ID NO:44所示的序列来进行描述。例如,表述“BaEV包膜糖蛋白的氨基酸530至564”是指,SEQ ID NO:44所示的多肽的第530-564位氨基酸残基。然而,本领域技术人员理解,在BaEV包膜糖蛋白的氨基酸序列中,可天然产生或人工引入突变或变异(包括但不限于,置换,缺失和/或添加),而不影响其生物学功能。因此,在本发明中,术语“BaEV包膜糖蛋白”应包括所有此类序列,包括例如SEQ ID NO:44所示的序列以及其天然或人工的变体。并且,当描述BaEV包膜糖蛋白的序列片段时,其不仅包括SEQ ID NO:44的序列片段,还包括其天然或人工变体中的相应序列片段。例如,表述“BaEV包膜糖蛋白的第530-564位氨基酸残基”包括,SEQ ID NO:44的第530-564位氨基酸残基,以及其变体(天然或人工)中的相应片段。根据本发明,表述“相应序列片段”或“相应片段”是指,当对序列进行最优比对时,即当序列进行比对以获得最高百分数同一性时,进行比较的序列中位于等同位置的片段。The sequence of the natural BaEV envelope glycoprotein can be found in public databases, for example, the amino acid sequence shown in SEQ ID NO: 44. As used herein, when referring to the amino acid sequence of the BaEV envelope glycoprotein, it is described using the sequence shown in SEQ ID NO: 44. For example, the expression "amino acids 530 to 564 of BaEV envelope glycoprotein" refers to amino acid residues 530-564 of the polypeptide shown in SEQ ID NO: 44. However, those skilled in the art understand that in the amino acid sequence of the BaEV envelope glycoprotein, mutations or variations (including, but not limited to, substitutions, deletions and/or additions) can occur naturally or be artificially introduced without affecting its biological function. . Therefore, in the present invention, the term "BaEV envelope glycoprotein" shall include all such sequences, including for example the sequence shown in SEQ ID NO: 44 and its natural or artificial variants. Moreover, when describing the sequence fragment of the BaEV envelope glycoprotein, it includes not only the sequence fragment of SEQ ID NO: 44, but also the corresponding sequence fragment in its natural or artificial variants. For example, the expression "amino acid residues 530-564 of BaEV envelope glycoprotein" includes amino acid residues 530-564 of SEQ ID NO: 44, and corresponding fragments in its variants (natural or artificial). According to the present invention, the expression "corresponding sequence fragment" or "corresponding fragment" means that when the sequences are optimally aligned, that is when the sequences are aligned to obtain the highest percent identity, equivalent positions are located in the sequences being compared. fragment.
如本领域技术人员已知的,BaEV包膜糖蛋白由胞质尾结构域、跨膜结构域和胞外结构域构成。BaEV包膜糖蛋白序列中对应于胞质尾结构域、跨膜结构域和胞外结构域的区域可以由技术人员容易地确定。通常,胞质尾结构域包括BaEV包膜糖蛋白的氨基酸530至564;跨膜结构域包括BaEV包膜糖蛋白的氨基酸507至529;胞外结构域包括BaEV包膜糖蛋白的氨基酸1至506。在一个示例性方案中,BaEV包膜糖蛋白的跨膜结构域包含或由氨基酸序列SEQ ID NO:45组成。在一个示例性方案中,BaEV包膜糖蛋白的野生型胞外结构域包含或由氨基酸序列SEQ ID NO:35组成。As known to those skilled in the art, the BaEV envelope glycoprotein consists of a cytoplasmic tail domain, a transmembrane domain and an extracellular domain. The regions in the BaEV envelope glycoprotein sequence corresponding to the cytoplasmic tail domain, the transmembrane domain and the extracellular domain can be easily determined by the skilled person. Typically, the cytoplasmic tail domain includes amino acids 530 to 564 of the BaEV envelope glycoprotein; the transmembrane domain includes amino acids 507 to 529 of the BaEV envelope glycoprotein; and the extracellular domain includes amino acids 1 to 506 of the BaEV envelope glycoprotein. . In an exemplary embodiment, the transmembrane domain of the BaEV envelope glycoprotein includes or consists of the amino acid sequence SEQ ID NO: 45. In an exemplary embodiment, the wild-type extracellular domain of the BaEV envelope glycoprotein includes or consists of the amino acid sequence SEQ ID NO: 35.
如本文中所使用的,术语“MLV包膜糖蛋白”意欲包括MLV包膜糖蛋白的野生型形式或与所述野生型MLV包膜糖蛋白具有至少85%、优选至少90%、更优选至少95%、还更优选至少99%同一性的所述野生型MLV包膜糖蛋白的突变体,所述突变体糖蛋白保留野生型糖蛋白结合细胞膜并与细胞膜融合的能力。As used herein, the term "MLV envelope glycoprotein" is intended to include the wild-type form of the MLV envelope glycoprotein or to be at least 85% identical to said wild-type MLV envelope glycoprotein, preferably at least 90%, more preferably at least A mutant of the wild-type MLV envelope glycoprotein that is 95%, still more preferably at least 99%, identical and retains the ability of the wild-type glycoprotein to bind to and fuse with the cell membrane.
天然的MLV包膜糖蛋白的序列在公共数据库中可以查到,例如,SEQ ID NO:34所示的氨基酸序列。如本文中所使用的,当提及MLV包膜糖蛋白的氨基酸序列时,其使用SEQ ID NO:34所示的序列来进行描述。例如,表述“MLV包膜糖蛋白的氨基酸623至655”是指,SEQ ID NO:34所示的多肽的第623位氨基酸残基至655位氨 基酸残基。然而,本领域技术人员理解,在MLV包膜糖蛋白的氨基酸序列中,可天然产生或人工引入突变或变异(包括但不限于,置换,缺失和/或添加),而不影响其生物学功能。因此,在本发明中,术语“MLV包膜糖蛋白”应包括所有此类序列,包括例如SEQ ID NO:34所示的序列以及其天然或人工的变体。并且,当描述MLV包膜糖蛋白的序列片段时,其不仅包括SEQ ID NO:34的序列片段,还包括其天然或人工变体中的相应序列片段。例如,表述“MLV包膜糖蛋白的第623位氨基酸残基至655位氨基酸残基”包括,SEQ ID NO:34的第623位氨基酸残基至655位氨基酸残基,以及其变体(天然或人工)中的相应片段。根据本发明,表述“相应序列片段”或“相应片段”是指,当对序列进行最优比对时,即当序列进行比对以获得最高百分数同一性时,进行比较的序列中位于等同位置的片段。The sequence of the natural MLV envelope glycoprotein can be found in public databases, for example, the amino acid sequence shown in SEQ ID NO: 34. As used herein, when referring to the amino acid sequence of the MLV envelope glycoprotein, it is described using the sequence set forth in SEQ ID NO: 34. For example, the expression "amino acids 623 to 655 of MLV envelope glycoprotein" refers to amino acid residues 623 to 655 of the polypeptide shown in SEQ ID NO: 34. However, those skilled in the art understand that in the amino acid sequence of the MLV envelope glycoprotein, mutations or variations (including, but not limited to, substitutions, deletions and/or additions) can occur naturally or be artificially introduced without affecting its biological function. . Therefore, in the present invention, the term "MLV envelope glycoprotein" shall include all such sequences, including for example the sequence shown in SEQ ID NO: 34 and its natural or artificial variants. Moreover, when describing the sequence fragment of the MLV envelope glycoprotein, it includes not only the sequence fragment of SEQ ID NO: 34, but also the corresponding sequence fragment in its natural or artificial variants. For example, the expression "amino acid residues 623 to 655 of MLV envelope glycoprotein" includes amino acid residues 623 to 655 of SEQ ID NO: 34, and variants thereof (natural or the corresponding fragment in artificial). According to the present invention, the expression "corresponding sequence fragment" or "corresponding fragment" means that when the sequences are optimally aligned, that is when the sequences are aligned to obtain the highest percent identity, equivalent positions are located in the compared sequences. fragment.
如本领域技术人员已知的,MLV包膜糖蛋白由胞质尾结构域、跨膜结构域和胞外结构域构成。MLV包膜糖蛋白序列中对应于胞质尾结构域、跨膜结构域和胞外结构域的区域可以由技术人员容易地确定。通常,胞质尾结构域包括MLV包膜糖蛋白的氨基酸623至655。因此,MLV包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基通常对应于MLV包膜糖蛋白的氨基酸623至635。在一个示例性方案中,MLV包膜糖蛋白的胞质尾结构域由氨基酸序列SEQ ID NO:5组成。在一个示例性方案中,MLV包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基由氨基酸序列SEQ ID NO:5的第1-13位氨基酸残基组成。As is known to those skilled in the art, the MLV envelope glycoprotein consists of a cytoplasmic tail domain, a transmembrane domain, and an extracellular domain. The regions of the MLV envelope glycoprotein sequence corresponding to the cytoplasmic tail domain, transmembrane domain and extracellular domain can be readily determined by the skilled person. Typically, the cytoplasmic tail domain includes amino acids 623 to 655 of the MLV envelope glycoprotein. Therefore, amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein generally correspond to amino acids 623 to 635 of the MLV envelope glycoprotein. In an exemplary embodiment, the cytoplasmic tail domain of the MLV envelope glycoprotein consists of the amino acid sequence SEQ ID NO: 5. In an exemplary embodiment, amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein are composed of amino acid residues 1-13 of the amino acid sequence SEQ ID NO: 5.
在本发明的上下文中,术语“融合抑制性R肽”是指包膜糖蛋白的胞质尾结构域的C-末端部分,其通常携带酪氨酸内吞信号-YXXL,并在病毒颗粒成熟过程中被病毒蛋白酶裂解,从而增强包膜糖蛋白的膜融合。各种包膜糖蛋白中的融合抑制性R肽可以由本领域技术人员容易地确定,并且是本领域技术人员已知的。例如,BaEV包膜糖蛋白的融合抑制性R肽通常包括BaEV包膜糖蛋白的氨基酸547至564。MLV包膜糖蛋白的融合抑制性R肽包括MLV包膜糖蛋白的氨基酸640至655,其示例性序列如SEQ ID NO:6所示。In the context of the present invention, the term "fusion-inhibitory R peptide" refers to the C-terminal part of the cytoplasmic tail domain of the envelope glycoprotein, which normally carries the tyrosine endocytic signal -YXXL and is involved in viral particle maturation It is cleaved by viral protease during the process, thereby enhancing the membrane fusion of envelope glycoproteins. Fusion-inhibiting R peptides in various envelope glycoproteins can be readily determined by, and are known to, those skilled in the art. For example, fusion-inhibiting R peptides of the BaEV envelope glycoprotein typically include amino acids 547 to 564 of the BaEV envelope glycoprotein. The fusion-inhibiting R peptide of the MLV envelope glycoprotein includes amino acids 640 to 655 of the MLV envelope glycoprotein, an exemplary sequence of which is shown in SEQ ID NO: 6.
在本发明的上下文中,术语“切割序列”是指慢病毒蛋白酶所识别并进行切割的序列。通常,病毒的多蛋白(例如,Gag和Gag-Pro-Pol多蛋白)在复制的最后阶段由慢病毒蛋白酶识别并切割成多个功能蛋白(例如,Pol蛋白经切割后能够产生反转录酶,蛋白酶,核糖核酸酶H和整合酶)。这些切割序列可以分为两种类型,天然的切割序列以及人工合成的切割序列。慢病毒蛋白酶的天然切割序列是本领域技术 人员熟知的,参见例如József 
Figure PCTCN2022102194-appb-000002
Viruses 2010,2,147-165;doi:10.3390/v2010147。
In the context of the present invention, the term "cleavage sequence" refers to a sequence recognized and cleaved by the lentiviral protease. Typically, viral polyproteins (e.g., Gag and Gag-Pro-Pol polyproteins) are recognized and cleaved into multiple functional proteins (e.g., Pol protein can produce reverse transcriptase after cleavage) by lentiviral proteases at the final stage of replication , protease, ribonuclease H and integrase). These cleavage sequences can be divided into two types, natural cleavage sequences and synthetic cleavage sequences. The native cleavage sequences of lentiviral proteases are well known to those skilled in the art, see e.g. József
Figure PCTCN2022102194-appb-000002
Viruses 2010, 2, 147-165; doi:10.3390/v2010147.
如本文中所使用的,术语“嵌合抗原受体(CAR)”是指,具有与免疫细胞(例如,NK细胞,B细胞,T细胞)受体的一个或多个细胞内信号结构域接合的细胞外抗体衍生的靶向结构域(例如scFv)的工程化的免疫细胞受体。能够表达此类嵌合抗原受体的T细胞被称为CAR-T细胞。通常,能够表达CAR的免疫细胞将具有由该CAR的靶向结构域决定的抗原特异性。构建和制造CAR(例如,用于癌症治疗)的方法是本领域已知的,参见例如,Park等人,Trends Biotechnol.,29:550-557,2011;Grupp等人,N Engl J Med.,368:1509-1518,2013;Han等人,J.Hematol Oncol.,6:47,2013;PCT专利公开文本WO2012/079000、WO2013/059593;和美国专利公开文本2012/0213783,其全部通过引用整体并入本文。As used herein, the term "chimeric antigen receptor (CAR)" refers to a receptor having one or more intracellular signaling domains that engage an immune cell (e.g., NK cell, B cell, T cell) Engineered immune cell receptors with extracellular antibody-derived targeting domains (e.g., scFv). T cells that express such chimeric antigen receptors are called CAR-T cells. Typically, an immune cell capable of expressing a CAR will have an antigen specificity determined by the targeting domain of the CAR. Methods of constructing and manufacturing CARs (e.g., for cancer treatment) are known in the art, see, e.g., Park et al., Trends Biotechnol., 29:550-557, 2011; Grupp et al., N Engl J Med., 368:1509-1518, 2013; Han et al., J. Hematol Oncol., 6:47, 2013; PCT patent publications WO2012/079000, WO2013/059593; and US patent publication 2012/0213783, all of which are incorporated by reference in their entirety Incorporated herein.
如本文中所使用的,术语“载体”是指,可将多聚核苷酸插入其中的一种核酸运载工具。当载体能使插入的多核苷酸编码的蛋白获得表达时,载体称为表达载体。载体可以通过转化,转导或者转染导入宿主细胞,使其携带的遗传物质元件在宿主细胞中获得表达。载体是本领域技术人员公知的,包括但不限于:质粒;噬菌粒;柯斯质粒;人工染色体,例如酵母人工染色体(YAC)、细菌人工染色体(BAC)或P1来源的人工染色体(PAC);噬菌体如λ噬菌体或M13噬菌体及动物病毒等。可用作载体的动物病毒包括但不限于,逆转录酶病毒(包括慢病毒)、腺病毒、腺相关病毒、疱疹病毒(如单纯疱疹病毒)、痘病毒、杆状病毒、乳头瘤病毒、乳头多瘤空泡病毒(如SV40)。一种载体可以含有多种控制表达的元件,包括但不限于,启动子序列、转录起始序列、增强子序列、选择元件及报告基因。另外,载体还可含有复制起始位点。As used herein, the term "vector" refers to a nucleic acid delivery vehicle into which a polynucleotide can be inserted. When the vector can express the protein encoded by the inserted polynucleotide, the vector is called an expression vector. The vector can be introduced into the host cell through transformation, transduction or transfection, so that the genetic material elements it carries can be expressed in the host cell. Vectors are well known to those skilled in the art, including but not limited to: plasmids; phagemids; cosmids; artificial chromosomes, such as yeast artificial chromosomes (YAC), bacterial artificial chromosomes (BAC) or P1-derived artificial chromosomes (PAC) ; Phages such as lambda phage or M13 phage and animal viruses, etc. Animal viruses that can be used as vectors include, but are not limited to, retroviruses (including lentiviruses), adenoviruses, adeno-associated viruses, herpesviruses (such as herpes simplex virus), poxviruses, baculoviruses, papillomaviruses, papillomaviruses, Polyomavacuolating viruses (such as SV40). A vector can contain a variety of expression-controlling elements, including, but not limited to, promoter sequences, transcription initiation sequences, enhancer sequences, selection elements, and reporter genes. In addition, the vector may also contain an origin of replication site.
如本文中所使用的,术语“宿主细胞”是指,可用于导入载体的细胞,其包括但不限于,如大肠杆菌或枯草菌等的原核细胞,如酵母细胞或曲霉菌等的真菌细胞,如S2果蝇细胞或Sf9等的昆虫细胞,或者如纤维原细胞,CHO细胞,COS细胞,NSO细胞,HeLa细胞,BHK细胞,HEK 293细胞或人细胞等的动物细胞。As used herein, the term "host cell" refers to a cell that can be used to introduce a vector, which includes, but is not limited to, prokaryotic cells such as E. coli or Bacillus subtilis, fungal cells such as yeast cells or Aspergillus, etc. Insect cells such as S2 Drosophila cells or Sf9, or animal cells such as fibroblasts, CHO cells, COS cells, NSO cells, HeLa cells, BHK cells, HEK 293 cells or human cells.
本领域技术人员将理解,表达载体的设计可取决于诸如待转化的宿主细胞的选择、所希望的表达水平等因素。一种载体可以被引入到宿主细胞中而由此产生转录物、蛋白质、或肽,包括由如本文所述的蛋白、融合蛋白、分离的核酸分子等。Those skilled in the art will understand that the design of the expression vector may depend on factors such as the choice of host cell to be transformed, the desired level of expression, and the like. A vector can be introduced into a host cell to thereby produce transcripts, proteins, or peptides, including proteins, fusion proteins, isolated nucleic acid molecules, and the like as described herein.
如本文所使用的,术语“密码子简并性”是指遗传密码允许核苷酸序列变异而不影 响所编码多肽的氨基酸序列的性质。技术人员熟知特定宿主细胞在使用核苷酸密码子来指定一定氨基酸时展现的“密码子偏好”。因此,在以改良在宿主细胞内的表达为目标合成基因时,理想的是设计基因使其密码子使用频率接近宿主细胞优选密码子的使用频率。As used herein, the term "codon degeneracy" refers to the property of the genetic code that allows nucleotide sequence variation without affecting the amino acid sequence of the encoded polypeptide. The skilled artisan is familiar with the "codon bias" exhibited by a particular host cell in the use of nucleotide codons to specify certain amino acids. Therefore, when synthesizing a gene with the goal of improving expression in a host cell, it is ideal to design the gene so that its codon usage frequency is close to that of the host cell's preferred codon usage.
如本文所使用的,术语“密码子优化”在指示基因或用于转化各种生物体的核酸分子的编码区时,是指改变基因或核酸分子编码区中的密码子以反映宿主生物体的典型密码子用法,而不改变该DNA所编码的多肽。这种优化包括用一个或多个在该生物体基因中使用频率更高的密码子代替至少一个或者超过一个或者显著数目的密码子。As used herein, the term "codon optimization," when referring to the coding region of a gene or nucleic acid molecule used to transform various organisms, refers to changing the codons in the coding region of the gene or nucleic acid molecule to reflect that of the host organism. Typical codon usage without changing the polypeptide encoded by the DNA. Such optimization involves replacing at least one or more than one or a significant number of codons with one or more codons that are more frequently used in the genes of the organism.
如本文所使用的,术语“转化”、“转导”或“转染”的意思是,将“外来”(即异源)基因、DNA或RNA序列引入到宿主细胞中的过程。在某些情况下,外来基因或序列的转化、转导或转染将使得宿主细胞能够表达所引入的基因或序列,产生期望的物质。用于转化、转导或转染的方法是已知的,包括例如磷酸钙转化,聚凝胺转化,原生质体融合,电穿孔,超声方法(例如,声致穿孔),脂质体转化,显微注射,裸DNA,质粒载体,病毒载体,基因枪(微粒轰击),碳化硅介导的转化,气雾剂集束,或PEG转化等。As used herein, the terms "transformation," "transduction," or "transfection" mean the process of introducing a "foreign" (ie, heterologous) gene, DNA, or RNA sequence into a host cell. In some cases, transformation, transduction or transfection of a foreign gene or sequence will enable the host cell to express the introduced gene or sequence and produce the desired substance. Methods for transformation, transduction or transfection are known and include, for example, calcium phosphate transformation, polybrene transformation, protoplast fusion, electroporation, sonication methods (e.g., sonoporation), liposome transformation, visualization. Microinjection, naked DNA, plasmid vectors, viral vectors, gene gun (microparticle bombardment), silicon carbide-mediated transformation, aerosol beam, or PEG transformation, etc.
根据本发明,术语“有效量”是指足以获得或至少部分获得期望的效果的量。例如,预防疾病有效量是指,足以预防,阻止,或延迟疾病的发生的量;治疗疾病有效量是指,足以治愈或至少部分阻止已患有疾病的患者的疾病和其并发症的量。测定这样的有效量完全在本领域技术人员的能力范围之内。例如,对于治疗用途有效的量将取决于待治疗的疾病的严重度、患者自己的免疫系统的总体状态、患者的一般情况例如年龄,体重和性别,药物的施用方式,以及同时施用的其他治疗等等。According to the present invention, the term "effective amount" means an amount sufficient to obtain, or at least partially obtain, the desired effect. For example, a disease-preventing effective amount refers to an amount sufficient to prevent, prevent, or delay the occurrence of a disease; a disease-treating effective amount refers to an amount sufficient to cure or at least partially prevent the disease and its complications in patients who already suffer from the disease. Determining such effective amounts is well within the capabilities of those skilled in the art. For example, the amount effective for therapeutic use will depend on the severity of the disease to be treated, the overall status of the patient's own immune system, the patient's general condition such as age, weight and gender, the manner in which the drug is administered, and other treatments administered concurrently etc.
发明的有益效果Beneficial effects of the invention
本申请的发明人经过大量实验,制备了一种经改造的病毒包膜蛋白,并进一步制备了包含其的假型化病毒样颗粒。与现有技术相比,所述经改造的病毒包膜蛋白提升了病毒样颗粒对免疫细胞(例如,B细胞,T细胞,NK细胞)的感染效率。此外,还已发现,所获得的病毒样颗粒对普通的宿主细胞(例如,293T细胞)的毒害作用显著下降。The inventor of the present application prepared a modified virus envelope protein through extensive experiments, and further prepared pseudotyped virus-like particles containing it. Compared with the prior art, the modified viral envelope protein improves the infection efficiency of virus-like particles on immune cells (eg, B cells, T cells, NK cells). In addition, it has been found that the toxicity of the obtained virus-like particles to ordinary host cells (eg, 293T cells) is significantly reduced.
此类假型化病毒样颗粒是特别有用的,例如,其可以用于将目的外源核酸(例如编码嵌合抗原受体(CAR)的外源核酸)高效导入细胞(特别是免疫细胞,例如B细胞,T细胞,NK细胞),并使其表达目的外源核酸所编码的产物(例如嵌合抗原受体(CAR))。由此所获得的细胞(特别是免疫细胞)可以在多个方面具有良好的应用前景,例如可用于 预防和/或治疗病毒感染、细菌感染、癌症、肿瘤、炎性疾病或自身免疫性疾病。Such pseudotyped virus-like particles are particularly useful, for example, for the efficient introduction of exogenous nucleic acids of interest (eg, exogenous nucleic acids encoding chimeric antigen receptors (CARs)) into cells (especially immune cells, e.g. B cells, T cells, NK cells), and allow them to express the product encoded by the target exogenous nucleic acid (such as chimeric antigen receptor (CAR)). The cells (especially immune cells) thus obtained can have good application prospects in many aspects, such as preventing and/or treating viral infections, bacterial infections, cancer, tumors, inflammatory diseases or autoimmune diseases.
下面将结合附图和实施例对本发明的实施方案进行详细描述,但是本领域技术人员将理解,下列附图和实施例仅用于说明本发明,而不是对本发明的范围的限定。根据附图和优选实施方案的下列详细描述,本发明的各种目的和有利方面对于本领域技术人员来说将变得显然。The embodiments of the present invention will be described in detail below with reference to the accompanying drawings and examples, but those skilled in the art will understand that the following drawings and examples are only used to illustrate the present invention and do not limit the scope of the present invention. Various objects and advantageous aspects of the present invention will become apparent to those skilled in the art from the accompanying drawings and the following detailed description of preferred embodiments.
附图说明Description of drawings
图1显示了6种BaEV包膜蛋白的连接示意图,其中,SP为信号肽,BaEVwt为野生型BaEV包膜结构,BaEVwt包含BaEV包膜糖蛋白的胞外结构域(Ectodomain),跨膜结构域(TM)和胞质尾结构域(Cytoplasm);BaEVRless包含BaEV包膜糖蛋白的胞外结构域(Ectodomain),跨膜结构域(TM)和缺乏融合抑制性R肽的胞质尾结构域(Cytoplasm/R-);BaEVTR包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及MLV胞质尾结构域(MLV Cytoplasm);BaEVTRless包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及缺乏融合抑制性R肽的MLV胞质尾结构域(MLV Cytoplasm/R-);BaEVTR-pro包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及替换了pro序列(天然的HIV-1蛋白酶切割序列)的MLV胞质尾结构域(MLV Cytoplasm-Pro);BaEVTR-synt包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及替换了synt序列(人工合成的HIV-1蛋白酶切割序列)的MLV胞质尾结构域(MLV Cytoplasm-synt)。Figure 1 shows a schematic diagram of the connection of six BaEV envelope proteins, in which SP is the signal peptide, BaEVwt is the wild-type BaEV envelope structure, and BaEVwt contains the extracellular domain (Ectodomain) and transmembrane domain of the BaEV envelope glycoprotein. (TM) and cytoplasmic tail domain (Cytoplasm); BaEVRless contains the extracellular domain (Ectodomain) of the BaEV envelope glycoprotein, the transmembrane domain (TM) and the cytoplasmic tail domain lacking the fusion inhibitory R peptide ( Cytoplasm/R-); BaEVTR contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and the MLV cytoplasmic tail domain (MLV Cytoplasm); BaEVTRless contains the BaEV envelope glycoprotein The extracellular domain (Ectodomain) and transmembrane domain (TM), as well as the MLV cytoplasmic tail domain (MLV Cytoplasm/R-) lacking the fusion inhibitory R peptide; BaEVTR-pro contains the extracellular domain of the BaEV envelope glycoprotein. Structural domain (Ectodomain) and transmembrane domain (TM), as well as the MLV cytoplasmic tail domain (MLV Cytoplasm-Pro) that replaces the pro sequence (natural HIV-1 protease cleavage sequence); BaEVTR-synt contains the BaEV envelope The extracellular domain (Ectodomain) and transmembrane domain (TM) of the glycoprotein, as well as the MLV Cytoplasm-synt that replaces the synt sequence (synthetic HIV-1 protease cleavage sequence).
图2显示了2种嵌合抗原受体的连接示意图,其中,BCMA CAR包含SP,BCMA scFv,CD8Hinge,CD8TM,4-1BB和CD3ζ;BCMA CAR-sIL15包含SP,BCMA scFv,CD8Hinge,CD8TM,4-1BB,CD3ζ,P2A和sIL15。其中,SP为信号肽,BCMA scFv为抗B细胞成熟抗原的单链抗体,CD8Hinge为CD8铰链区,CD8TM为CD8跨膜区,4-1BB为共刺激因子,CD3ζ为CD3ζ的胞内信号结构域、P2A为自剪切多肽,sIL15为分泌型白介素15。Figure 2 shows a schematic diagram of the connection of two chimeric antigen receptors. BCMA CAR contains SP, BCMA scFv, CD8Hinge, CD8TM, 4-1BB and CD3ζ; BCMA CAR-sIL15 contains SP, BCMA scFv, CD8Hinge, CD8TM, 4 -1BB, CD3ζ, P2A and sIL15. Among them, SP is the signal peptide, BCMA scFv is the single chain antibody against B cell maturation antigen, CD8Hinge is the CD8 hinge region, CD8TM is the CD8 transmembrane region, 4-1BB is the costimulatory factor, and CD3ζ is the intracellular signaling domain of CD3ζ. , P2A is a self-cleaving polypeptide, and sIL15 is secreted interleukin 15.
图3显示了用5种包膜蛋白构建的病毒样颗粒分别转染Jurkat和NK92细胞后,对细胞进行流式分析的结果。Figure 3 shows the results of flow cytometry analysis of Jurkat and NK92 cells after transfection of virus-like particles constructed with five envelope proteins respectively.
图4显示了用5种包膜蛋白构建的病毒分别转染原代NK细胞后,对细胞进行流式分析的结果图。Figure 4 shows the results of flow cytometry analysis of primary NK cells after they were transfected with viruses constructed from five envelope proteins.
图5显示了用编码不同包膜蛋白的载体转染293T细胞后的细胞形态,其中,图5A为用编码BaEVRless的载体转染293T细胞后的细胞形态,图5B为用编码BaEVTRless的载体转染293T细胞后的细胞形态,图5C为用编码BaEVTR的载体转染293T细胞后的细胞形态,图5D为用编码BaEVTR-pro的载体转染293T细胞后的细胞形态,图5E为用编码BaEVTR-synt的载体转染293T细胞后的细胞形态。Figure 5 shows the cell morphology after transfection of 293T cells with vectors encoding different envelope proteins. Figure 5A shows the cell morphology after transfection of 293T cells with vectors encoding BaEVRless. Figure 5B shows the cell morphology after transfection with vectors encoding BaEVTRless. The cell morphology of 293T cells after transfection with a vector encoding BaEVTR. Figure 5C shows the cell morphology of 293T cells after transfection with a vector encoding BaEVTR. Figure 5D shows the cell morphology of 293T cells after transfection with a vector encoding BaEVTR-pro. Figure 5E shows the cell morphology after transfection with a vector encoding BaEVTR-pro. Cell morphology after transfection of 293T cells with synt vector.
图6显示了用5种包膜蛋白构建的病毒样颗粒分别转染人T淋巴细胞后,对细胞进行流式分析的结果。Figure 6 shows the results of flow cytometry analysis of human T lymphocytes after transfecting virus-like particles constructed with five envelope proteins respectively.
序列信息sequence information
本发明涉及的部分序列的信息提供于下面的表1中。Information on partial sequences involved in the present invention is provided in Table 1 below.
表1.序列信息Table 1. Sequence information
Figure PCTCN2022102194-appb-000003
Figure PCTCN2022102194-appb-000003
Figure PCTCN2022102194-appb-000004
Figure PCTCN2022102194-appb-000004
Figure PCTCN2022102194-appb-000005
Figure PCTCN2022102194-appb-000005
Figure PCTCN2022102194-appb-000006
Figure PCTCN2022102194-appb-000006
Figure PCTCN2022102194-appb-000007
Figure PCTCN2022102194-appb-000007
Figure PCTCN2022102194-appb-000008
Figure PCTCN2022102194-appb-000008
Figure PCTCN2022102194-appb-000009
Figure PCTCN2022102194-appb-000009
Figure PCTCN2022102194-appb-000010
Figure PCTCN2022102194-appb-000010
具体实施方式Detailed ways
现参照下列意在举例说明本发明(而非限定本发明)的实施例来描述本发明。The invention will now be described with reference to the following examples which are intended to illustrate but not to limit the invention.
除非特别指明,否则基本上按照本领域内熟知的以及在各种参考文献中描述的常规方法进行实施例中描述的实验和方法。例如,本发明中所使用的免疫学、生物化学、化学、分子生物学、微生物学、细胞生物学、基因组学和重组DNA等常规技术,可参见萨姆布鲁克(Sambrook)、弗里奇(Fritsch)和马尼亚蒂斯(Maniatis),《分子克隆:实验室手册》(MOLECULAR CLONING:A LABORATORY MANUAL),第2次编辑(1989);《当代分子生物学实验手册》(CURRENT PROTOCOLS IN MOLECULAR BIOLOGY)(F.M.奥苏贝尔(F.M.Ausubel)等人编辑,(1987));《酶学方法》(METHODS  IN ENZYMOLOGY)系列(学术出版公司):《PCR 2:实用方法》(PCR 2:A PRACTICAL APPROACH)(M.J.麦克弗森(M.J.MacPherson)、B.D.黑姆斯(B.D.Hames)和G.R.泰勒(G.R.Taylor)编辑(1995)),以及《动物细胞培养》(ANIMAL CELL CULTURE)(R.I.弗雷谢尼(R.I.Freshney)编辑(1987))。Unless otherwise indicated, the experiments and methods described in the examples were performed essentially according to conventional methods well known in the art and described in various references. For example, for conventional techniques such as immunology, biochemistry, chemistry, molecular biology, microbiology, cell biology, genomics and recombinant DNA used in the present invention, see Sambrook, Fritsch ) and Maniatis, MOLECULAR CLONING: A LABORATORY MANUAL, 2nd ed. (1989); CURRENT PROTOCOLS IN MOLECULAR BIOLOGY ) (edited by F.M. Ausubel et al., (1987)); "METHODS IN ENZYMOLOGY" series (Academic Publishing Company): "PCR 2: A PRACTICAL APPROACH" ) (edited by M.J. MacPherson, B.D. Hames, and G.R. Taylor (1995)), and "ANIMAL CELL CULTURE" (R.I. Frecheni) Edited by R.I. Freshney (1987)).
另外,实施例中未注明具体条件者,按照常规条件或制造商建议的条件进行。所用试剂或仪器未注明生产厂商者,均为可以通过市购获得的常规产品。本领域技术人员知晓,实施例以举例方式描述本发明,且不意欲限制本发明所要求保护的范围。本文中提及的全部公开案和其他参考资料以其全文通过引用合并入本文。In addition, if the specific conditions are not specified in the examples, the conventional conditions or the conditions recommended by the manufacturer shall be followed. If the manufacturer of the reagents or instruments used is not indicated, they are all conventional products that can be purchased commercially. Those skilled in the art will appreciate that the examples describe the invention by way of example and are not intended to limit the scope of the invention as claimed. All publications and other references mentioned herein are incorporated by reference in their entirety.
实施例1.载体的构建Example 1. Construction of vector
1.包膜质粒的构建1. Construction of envelope plasmid
5种BaEV包膜糖蛋白的连接示意图如图1所示,其中,BaEVRless(氨基酸序列如SEQ ID NO:8所示)为缺乏融合抑制性R肽的BaEV包膜糖蛋白,其包含BaEV包膜糖蛋白的胞外结构域(Ectodomain),跨膜结构域(TM)和缺乏融合抑制性R肽的胞质尾结构域(Cytoplasm/R-);The connection schematic diagram of the five BaEV envelope glycoproteins is shown in Figure 1. Among them, BaEVRless (the amino acid sequence is shown in SEQ ID NO: 8) is a BaEV envelope glycoprotein that lacks the fusion inhibitory R peptide and contains the BaEV envelope. The glycoprotein's extracellular domain (Ectodomain), transmembrane domain (TM) and cytoplasmic tail domain (Cytoplasm/R-) lacking the fusion inhibitory R peptide;
BaEVTR(氨基酸序列如SEQ ID NO:10所示)为替换了MLV胞质尾结构域的BaEV包膜糖蛋白,其包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及MLV胞质尾结构域(MLV Cytoplasm);BaEVTR (the amino acid sequence is shown in SEQ ID NO: 10) is a BaEV envelope glycoprotein that replaces the MLV cytoplasmic tail domain. It contains the extracellular domain (Ectodomain) and transmembrane domain (Ectodomain) of the BaEV envelope glycoprotein. TM), and MLV cytoplasmic tail domain (MLV Cytoplasm);
BaEVTRless(氨基酸序列如SEQ ID NO:12所示)在BaEVTR的基础上删除融合抑制性R肽,其包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及缺乏融合抑制性R肽的MLV胞质尾结构域(MLV Cytoplasm/R-);BaEVTRless (the amino acid sequence is shown in SEQ ID NO:12) is based on BaEVTR and deletes the fusion inhibitory R peptide, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and MLV cytoplasmic tail domain lacking fusion inhibitory R peptide (MLV Cytoplasm/R-);
BaEVTR-pro(氨基酸序列如SEQ ID NO:14所示)为经改造的BaEV包膜糖蛋白,其包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及替换了pro序列(天然的HIV-1蛋白酶切割序列)的MLV胞质尾结构域(MLV Cytoplasm-Pro,氨基酸序列如SEQ ID NO:42所示);BaEVTR-pro (amino acid sequence shown in SEQ ID NO: 14) is a modified BaEV envelope glycoprotein, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and The MLV cytoplasmic tail domain (MLV Cytoplasm-Pro, the amino acid sequence is shown in SEQ ID NO: 42) that replaces the pro sequence (natural HIV-1 protease cleavage sequence);
BaEVTR-synt(氨基酸序列如SEQ ID NO:16所示)为经改造的BaEV包膜糖蛋白,其包含BaEV包膜糖蛋白的胞外结构域(Ectodomain)和跨膜结构域(TM),以及替换了synt序列(人工合成的HIV-1蛋白酶切割序列)的MLV胞质尾结构域(MLV Cytoplasm-synt,氨基酸序列如SEQ ID NO:43所示)。BaEVTR-synt (amino acid sequence shown in SEQ ID NO: 16) is a modified BaEV envelope glycoprotein, which contains the extracellular domain (Ectodomain) and transmembrane domain (TM) of the BaEV envelope glycoprotein, and The MLV cytoplasm tail domain (MLV Cytoplasm-synt, the amino acid sequence is shown in SEQ ID NO: 43) that replaces the synt sequence (synthetic HIV-1 protease cleavage sequence).
分别合成了编码5种包膜蛋白的核苷酸序列(SEQ ID NO:9所示的编码BaEVRless 的核苷酸序列,SEQ ID NO:11所示的编码BaEVTR的核苷酸序列,SEQ ID NO:13所示的编码BaEVTRless的核苷酸序列,SEQ ID NO:15所示的编码BaEVTR-pro的核苷酸序列,SEQ ID NO:17所示的编码BaEVTR-synt的核苷酸序列)。The nucleotide sequences encoding five envelope proteins were synthesized respectively (the nucleotide sequence encoding BaEVRless shown in SEQ ID NO:9, the nucleotide sequence encoding BaEVTR shown in SEQ ID NO:11, SEQ ID NO The nucleotide sequence encoding BaEVTRless shown in SEQ ID NO:13, the nucleotide sequence encoding BaEVTR-pro shown in SEQ ID NO:15, and the nucleotide sequence encoding BaEVTR-synt shown in SEQ ID NO:17).
将上述5种核苷酸序列分别构建到pCMV载体上,挑取单克隆进行培养及保种,最终提取质粒进行测序,将测序正确的菌液冻存,备用。The above five nucleotide sequences were constructed into the pCMV vector respectively, single clones were selected for culture and seed conservation, and the plasmids were finally extracted for sequencing. The correctly sequenced bacterial liquid was frozen and stored for later use.
2.核心质粒的构建2. Construction of core plasmid
本实施例共构建了2种嵌合抗原受体(如图2所示),其中,BCMA CAR包含SP,BCMA scFv,CD8Hinge,CD8TM,4-1BB和CD3ζ;BCMA CAR-sIL15包含SP,BCMA scFv,CD8Hinge,CD8TM,4-1BB,CD3ζ,P2A和sIL15。其中,SP为信号肽(氨基酸序列如SEQ ID NO:18所示),BCMA scFv为抗B细胞成熟抗原的单链抗体(VH氨基酸序列如SEQ ID NO:20所示,VL氨基酸序列如SEQ ID NO:22所示),CD8Hinge为嵌合受体铰链(氨基酸序列如SEQ ID NO:26所示),CD8TM(氨基酸序列如SEQ ID NO:28所示)为嵌合受体跨膜区,4-1BB为共刺激因子(氨基酸序列如SEQ ID NO:30所示),CD3ζ为胞内信号肽(氨基酸序列如SEQ ID NO:32所示)、P2A为连接肽(氨基酸序列如SEQ ID NO:38所示),sIL15为超级白介素15(氨基酸序列如SEQ ID NO:36所示)。This example constructed a total of 2 chimeric antigen receptors (as shown in Figure 2). Among them, BCMA CAR contains SP, BCMA scFv, CD8Hinge, CD8TM, 4-1BB and CD3ζ; BCMA CAR-sIL15 contains SP, BCMA scFv , CD8Hinge, CD8TM, 4-1BB, CD3ζ, P2A and sIL15. Among them, SP is the signal peptide (the amino acid sequence is shown in SEQ ID NO:18), BCMA scFv is the single-chain antibody against B cell mature antigen (the VH amino acid sequence is shown in SEQ ID NO:20, and the VL amino acid sequence is shown in SEQ ID NO:22), CD8Hinge is the hinge of the chimeric receptor (the amino acid sequence is shown in SEQ ID NO:26), CD8TM (the amino acid sequence is shown in SEQ ID NO:28) is the transmembrane region of the chimeric receptor, 4 -1BB is a co-stimulatory factor (the amino acid sequence is shown in SEQ ID NO:30), CD3ζ is an intracellular signal peptide (the amino acid sequence is shown in SEQ ID NO:32), and P2A is a connecting peptide (the amino acid sequence is shown in SEQ ID NO: 38), sIL15 is super interleukin 15 (the amino acid sequence is shown in SEQ ID NO: 36).
将编码上述两种嵌合抗原受体的核酸分子分别构建到Lenti-3慢病毒载体(爱康得生物科技(苏州)有限公司)中。挑取单克隆进行培养及保种,最终提取质粒进行测序,将测序正确的菌液冻存,备用。The nucleic acid molecules encoding the above two chimeric antigen receptors were constructed into Lenti-3 lentiviral vector (Aikangde Biotechnology (Suzhou) Co., Ltd.). Select single clones for culture and conservation, and finally extract the plasmid for sequencing, and freeze the correctly sequenced bacterial liquid for later use.
实施例2.慢病毒的包装Example 2. Packaging of lentivirus
293T细胞接种15cm培养皿,第二天细胞汇合度达80%时进行质粒转染,将实施例1构建的BCMA CAR-sIL15质粒、包膜质粒和辅助质粒pGP(爱康得生物科技(苏州)有限公司),与转染试剂PEImax(购自Polyscience,货号24765-1)充分混匀后,室温静置孵育15min,随后将质粒混合液逐滴加入到293T细胞中,轻轻晃动培养皿,与培养基充分混匀,将培养皿置于37℃、5%CO 2培养箱;培养6-8小时后,将含有转染试剂的培养基去掉,更换为新鲜的含胎牛血清的高糖DMEM培养基。第三天收获病毒上清,添加新鲜的完全培养基;第四天收获病毒上清并与第三天收获的病毒上清混合在一起,转至离心管中,2000×g 4℃离心10min去除细胞碎片,随后将病毒上清4000g,4℃离心过夜。离心结束后,在生物安全柜中,小心将离心管中的液体吸去,加入含2%HSA的病毒上清, 分装后将病毒置于-80℃保存备用。 293T cells were inoculated into a 15cm culture dish, and plasmid transfection was performed the next day when the cell confluence reached 80%. The BCMA CAR-sIL15 plasmid constructed in Example 1, envelope plasmid and helper plasmid pGP (Aikand Biotechnology (Suzhou) Co., Ltd.), mix thoroughly with the transfection reagent PEImax (purchased from Polyscience, Cat. No. 24765-1), and incubate at room temperature for 15 minutes. Then add the plasmid mixture dropwise to the 293T cells, shake the culture dish gently, and incubate at room temperature for 15 minutes. Mix the culture medium thoroughly and place the culture dish in a 37°C, 5% CO2 incubator; after 6-8 hours of culture, remove the culture medium containing the transfection reagent and replace it with fresh high-glucose DMEM containing fetal bovine serum. culture medium. Harvest the virus supernatant on the third day and add fresh complete culture medium; harvest the virus supernatant on the fourth day and mix it with the virus supernatant harvested on the third day, transfer it to a centrifuge tube, and centrifuge it at 2000 × g at 4°C for 10 minutes to remove it. Cell fragments were then centrifuged at 4000 g of virus supernatant at 4°C overnight. After centrifugation, in a biological safety cabinet, carefully suck away the liquid in the centrifuge tube, add virus supernatant containing 2% HSA, aliquot and store the virus at -80°C for later use.
实施例3.病毒对Jurkat和NK92细胞的感染力比较Example 3. Comparison of virus infectivity on Jurkat and NK92 cells
1.参照实施例1和实施例2描述的步骤,在相同的病毒包装体系下和相同的质粒比例条件下包装病毒,收集病毒原液保存于4℃备用。1. Refer to the steps described in Example 1 and Example 2, package the virus under the same virus packaging system and the same plasmid ratio, collect the virus stock solution and store it at 4°C for later use.
2.取Jurkat和NK92细胞离心,用培养基重悬,将细胞密度调为3×10^ 6cells/ml,然后100μL/孔铺板24孔板,DEAE 5μg/ml。 2. Centrifuge Jurkat and NK92 cells, resuspend them in culture medium, adjust the cell density to 3×10^ 6 cells/ml, and then plate 100 μL/well into a 24-well plate with DEAE 5 μg/ml.
3.随后按照对应的孔加入1ml病毒原液,室温离心90min。3. Then add 1 ml of virus stock solution according to the corresponding wells, and centrifuge at room temperature for 90 minutes.
4.离心结束后放置37℃培养48h后,使用BCMA-PE抗原(购自ACRO,货号BCA-HP2H2),通过流式细胞术检测表达CAR蛋白的细胞的阳性率。4. After centrifugation, place the cells at 37°C for 48 hours and then use BCMA-PE antigen (purchased from ACRO, Cat. No. BCA-HP2H2) to detect the positive rate of cells expressing CAR protein by flow cytometry.
编码CAR的核酸序列在启动子的驱动下表达,使用BCMA-PE抗原对慢病毒转染的Jurkat和NK92细胞进行标记并通过流式进行测定,反映CAR在Jurkat和NK92细胞表面的表达水平。FACS检测结果表2和图3所示。结果显示,在相同条件下(使用相同的包装质粒和相同的核心质粒),使用BaEVTR-pro包膜质粒制备得到的假病毒对NK92和Jurkat细胞的感染率达到92.17%和96.05%;使用BaEVTR-synt包膜质粒制备得到的假病毒对NK92和Jurkat细胞的感染率达到78.55%和94.32%;显著优于使用其他包膜质粒制备得到的假病毒。The nucleic acid sequence encoding CAR is expressed under the drive of a promoter. Jurkat and NK92 cells transfected with lentivirus are labeled using BCMA-PE antigen and measured by flow cytometry, reflecting the expression level of CAR on the surface of Jurkat and NK92 cells. The FACS test results are shown in Table 2 and Figure 3. The results showed that under the same conditions (using the same packaging plasmid and the same core plasmid), the infection rate of the pseudovirus prepared using the BaEVTR-pro envelope plasmid reached 92.17% and 96.05% on NK92 and Jurkat cells; using BaEVTR- The infection rates of pseudoviruses prepared from synt envelope plasmids on NK92 and Jurkat cells reached 78.55% and 94.32% respectively; significantly better than pseudoviruses prepared using other envelope plasmids.
表2:NK92和Jurkat细胞的BCMA CAR阳性率检测结果Table 2: BCMA CAR positive rate detection results of NK92 and Jurkat cells
Figure PCTCN2022102194-appb-000011
Figure PCTCN2022102194-appb-000011
实施例4.病毒对原代NK细胞的感染力比较Example 4. Comparison of virus infectivity on primary NK cells
1.参照实施例1和实施例2的步骤,制备不同病毒包膜结构的BCMA CAR病毒浓缩液,所有的病毒浓缩液采用相同的包装条件进行包装,相同的浓缩倍数进行病毒浓缩, 所得病毒浓缩液保存于-80℃备用。1. Refer to the steps of Example 1 and Example 2 to prepare BCMA CAR virus concentrates with different virus envelope structures. All virus concentrates are packaged using the same packaging conditions, and the same concentration multiples are used for virus concentration, and the resulting virus is concentrated. The solution was stored at -80°C for later use.
2.复苏脐带血CBMC,用磁珠分选去除T淋巴细胞,用MACS基础培养基+10%FBS+500IU IL2+1%NK MACS supplement进行培养,将细胞密度调整至1×10^ 6/mL,按照1:1比例加入K562饲养层细胞,放置37℃,5%CO 2培养箱静置培养。 2. Resuscitate cord blood CBMC, use magnetic beads to remove T lymphocytes, culture with MACS basic medium + 10% FBS + 500IU IL2 + 1% NK MACS supplement, and adjust the cell density to 1×10^ 6 /mL , add K562 feeder cells at a ratio of 1:1, and place them in a 37°C, 5% CO 2 incubator for static culture.
3.培养3-4天后,将助转剂Novonectin与病毒浓缩液混合后,于37℃孵育30min后,加入脐带血细胞(含NK细胞),混匀后放置在37℃,5%CO 2培养箱静置转导。 3. After 3-4 days of culture, mix the transfer agent Novonectin with the virus concentrate, incubate at 37°C for 30 minutes, add umbilical cord blood cells (including NK cells), mix and place in a 37°C, 5% CO 2 incubator Standing transduction.
4.转导24h后,离心换液,用新鲜的MACS基础培养基+10%FBS+500IU IL2+1%NK MACS Supplement将NK细胞重悬,调整细胞密度1-2×10^ 6/mL,继续培养48h后,使用BCMA-PE抗原,通过流式细胞术检测表达CAR蛋白的细胞的阳性率。 4. After 24 hours of transduction, centrifuge and change the medium, resuspend the NK cells in fresh MACS basal medium + 10% FBS + 500IU IL2 + 1% NK MACS Supplement, and adjust the cell density to 1-2 × 10^ 6 /mL. After continuing to culture for 48 hours, BCMA-PE antigen was used to detect the positive rate of cells expressing CAR protein by flow cytometry.
FACS检测脐带NK细胞的BCMA CAR阳性率结果如图4所示。相同包装条件下所得的病毒原液中,BaEVTR-pro包膜质粒包装得到的病毒对脐带NK细胞的感染效率达到了82%,BaEVTR-synt包膜质粒包装得到的病毒对脐带NK细胞的感染效率达到了73%;BaEVTR-pro包膜质粒和BaEVTR-synt包膜质粒包装得到的病毒对脐带NK细胞的感染率显著优于其他包膜结构(BaEVTR包膜结构的感染率56%和BaEVTRless包膜结构的感染率36%)。The results of BCMA CAR positive rate detection of umbilical cord NK cells by FACS are shown in Figure 4. In the virus stock solution obtained under the same packaging conditions, the infection efficiency of the virus packaged by the BaEVTR-pro envelope plasmid on umbilical cord NK cells reached 82%, and the infection efficiency of the virus packaged by the BaEVTR-synt envelope plasmid on the umbilical cord NK cells reached 82%. The infection rate of viruses packaged by BaEVTR-pro envelope plasmid and BaEVTR-synt envelope plasmid on umbilical cord NK cells was significantly better than that of other envelope structures (the infection rate of BaEVTR envelope structure was 56% and that of BaEVTRless envelope structure infection rate 36%).
实施例5.不同包膜结构对包装细胞293T的细胞状态影响Example 5. Effects of different envelope structures on the cell status of packaging cells 293T
参照实施例2,在病毒包装过程的质粒转染步骤,质粒转染48h后对包装细胞293T进行拍照,以观察不同包膜结构的慢病毒对包装细胞的细胞毒性。Referring to Example 2, during the plasmid transfection step of the virus packaging process, the packaging cells 293T were photographed 48 hours after plasmid transfection to observe the cytotoxicity of lentiviruses with different envelope structures to the packaging cells.
结果如图5所示,BaEVRless(图5A)和BaEVTRless(图5B)包膜的病毒对包装细胞293T产生了明显的细胞毒性,贴壁细胞减少,细胞呈团状脱落。而BaEVTR(图5C)、BaEVTR-pro(图5D)和BaEVTR-synt(图5E)包膜的病毒对包装细胞293T的伤害较小,细胞贴壁良好。总的来讲,不管胞质尾是否替换,BaEV包膜蛋白的R肽去除都会增加对包装细胞的毒性,不利于包装细胞稳定有效的产毒;而通过替换胞质尾的HIV蛋白酶的剪切序列,例如BaEVTR-pro和BaEVTR-synt,不仅降低了包膜蛋白的细胞毒性,还提高了病毒的产毒效率(如实施例3和实施例4的结果所示)。The results are shown in Figure 5. The BaEVRless (Figure 5A) and BaEVTRless (Figure 5B) enveloped viruses produced obvious cytotoxicity to the packaging cells 293T. The adherent cells were reduced and the cells fell off in clumps. However, BaEVTR (Figure 5C), BaEVTR-pro (Figure 5D) and BaEVTR-synt (Figure 5E) enveloped viruses caused less damage to packaging cells 293T, and the cells adhered well. In general, regardless of whether the cytoplasmic tail is replaced or not, removal of the R peptide of the BaEV envelope protein will increase the toxicity to the packaging cells and is not conducive to stable and effective toxin production by the packaging cells; and by replacing the cytoplasmic tail of the HIV protease, Sequences, such as BaEVTR-pro and BaEVTR-synt, not only reduce the cytotoxicity of the envelope protein, but also increase the toxin production efficiency of the virus (as shown by the results of Example 3 and Example 4).
实施例6.病毒滴度检测Example 6. Virus titer detection
1.细胞铺板:Jurkat细胞按照1×10 5cells/孔接种密度,DEAE工作浓度5μg/ml,将细胞按照300μl/孔接种于24孔板; 1. Cell plating: Jurkat cells were seeded at a density of 1×10 5 cells/well, and the DEAE working concentration was 5 μg/ml. The cells were seeded in a 24-well plate at a density of 300 μl/well;
2.病毒稀释:使用细胞培养基为病毒稀释液,准备8个EP管,第1管加入0.95ml培养基,其余各加0.5ml培养基;按照稀释倍数1:1,1:2,1:4,1:8,1:16,1:32,1:64,1:128进行稀释;第1管加入50μl病毒浓缩液,混匀,取500μl到第2管,混匀,取500μl到第3管,依次类推。然后将铺好细胞的24孔板每孔加入对应的200μl病毒稀释液,混匀。2. Virus dilution: Use cell culture medium as virus dilution, prepare 8 EP tubes, add 0.95ml medium to the first tube, and add 0.5ml medium to each of the others; follow the dilution ratio of 1:1, 1:2, 1: 4, 1:8, 1:16, 1:32, 1:64, 1:128 for dilution; add 50μl virus concentrate to the first tube, mix well, take 500μl into the second tube, mix well, take 500μl into the second tube 3 tubes, and so on. Then add the corresponding 200 μl virus diluent to each well of the 24-well plate with cells spread, and mix well.
3. 800g离心,室温离心90min;离心完成后轻轻吹匀细胞,将24孔板放细胞培养箱培养。3. Centrifuge at 800g for 90 minutes at room temperature; after centrifugation, gently blow the cells evenly and place the 24-well plate in a cell culture incubator.
4.培养24h后,吸弃感染培养基,每孔加入1ml新鲜完全培养基,继续培养2天;4. After 24 hours of culture, aspirate the infection medium, add 1 ml of fresh complete culture medium to each well, and continue to culture for 2 days;
5.感染后72h,取出24孔板,吸取部分细胞进行抗体孵育,流式检测;5. 72 hours after infection, take out the 24-well plate, aspirate some cells for antibody incubation, and flow cytometric detection;
6.以未感染病毒的细胞样品作为本底信号,读取各样品的阳性百分比,选取阳性百分比在20%-50%区间内最接近20%的样品,记录所对应的病毒稀释倍数。6. Use cell samples not infected with the virus as the background signal, read the positive percentage of each sample, select the sample with a positive percentage closest to 20% in the 20%-50% range, and record the corresponding virus dilution factor.
样品病毒滴度TU/ml=[(样品阳性率-背景孔阳性率)×总细胞数]/病毒体积ml。Sample virus titer TU/ml = [(sample positive rate - background well positive rate) × total cell number]/virus volume ml.
lenti-BCMA CAR-sIL15病毒滴度测试结果显示,BaEVTR-pro包膜的病毒滴度达到2.16×10^ 8TU/mL;BaEVTR-synt包膜的病毒滴度达到8.08×10^ 7TU/mL,仅次于BaEVTR-pro;两者病毒滴度均显著高于其余三种病毒包膜,即BaEVRless包膜的病毒滴度为4.45×10 7TU/mL,BaEVTRless包膜的病毒滴度为2.28×10 7TU/mL,BaEVTR包膜的病毒滴度为2.85×10 7TU/mL。因此,通过替换BaEVTR胞质尾的HIV蛋白酶剪切序列为pro或synt,可以显著提高病毒的活性滴度。 The lenti-BCMA CAR-sIL15 virus titer test results showed that the virus titer of BaEVTR-pro envelope reached 2.16×10^ 8 TU/mL; the virus titer of BaEVTR-synt envelope reached 8.08×10^ 7 TU/mL. , second only to BaEVTR-pro; the virus titers of both are significantly higher than the other three virus envelopes, that is, the virus titer of the BaEVRless envelope is 4.45×10 7 TU/mL, and the virus titer of the BaEVTRless envelope is 2.28 ×10 7 TU/mL, the virus titer of BaEVTR envelope is 2.85 × 10 7 TU/mL. Therefore, by replacing the HIV protease cleavage sequence of the BaEVTR cytoplasmic tail with pro or synt, the activity titer of the virus can be significantly increased.
实施例7.改造包膜的慢病毒在其他免疫细胞的转导效率Example 7. Transduction efficiency of modified envelope lentivirus in other immune cells
1.在人T淋巴细胞的转导效率1. Transduction Efficiency in Human T Lymphocytes
复苏人PBMC,用anti-CD3/CD28磁珠将T淋巴细胞从PBMC中分选出来,用X-VIVO+10%FBS+200IU IL-2将细胞调整至1-2×10^ 6/mL,放置在37℃,5%CO 2培养箱静置激活48h。取T细胞离心,用培养基重悬,将细胞密度调为2×10^ 6cells/ml,1mL/孔铺板24孔板,加入病毒浓缩液100μL,加入DEAE 5μg/ml;离心转导,升5降1,室温离心90min。离心结束后放置37℃培养48h,使用BCMA-PE抗原,通过流式细胞术检测表达CAR蛋白的细胞的阳性率。 Resuscitate human PBMC, use anti-CD3/CD28 magnetic beads to separate T lymphocytes from PBMC, use X-VIVO+10% FBS+200IU IL-2 to adjust the cells to 1-2×10^ 6 /mL, Place in a 37°C, 5% CO2 incubator for 48h. Centrifuge the T cells, resuspend them in culture medium, adjust the cell density to 2×10^ 6 cells/ml, plate 1mL/well on a 24-well plate, add 100μL of virus concentrate, add DEAE 5μg/ml; centrifuge and transduce, liter 5 minus 1, and centrifuged at room temperature for 90 minutes. After centrifugation, the cells were cultured at 37°C for 48 hours, and BCMA-PE antigen was used to detect the positive rate of cells expressing CAR protein by flow cytometry.
结果如表3和图6所示,BaEVTR-pro包膜质粒包装得到的病毒对人T淋巴细胞的感染效率达到了87.56%,显著高于其它的包膜结构。The results are shown in Table 3 and Figure 6. The virus packaged by BaEVTR-pro envelope plasmid has an infection efficiency of 87.56% on human T lymphocytes, which is significantly higher than other envelope structures.
表3.人T淋巴细胞的转导效率Table 3. Transduction efficiency of human T lymphocytes
Figure PCTCN2022102194-appb-000012
Figure PCTCN2022102194-appb-000012
尽管本发明的具体实施方式已经得到详细的描述,但本领域技术人员将理解:根据已经公布的所有教导,可以对细节进行各种修改和变动,并且这些改变均在本发明的保护范围之内。本发明的全部分为由所附权利要求及其任何等同物给出。Although the specific embodiments of the present invention have been described in detail, those skilled in the art will understand that various modifications and changes can be made to the details based on all teachings that have been published, and these changes are within the protection scope of the present invention. . The full scope of the present invention is given by the appended claims and any equivalents thereof.

Claims (24)

  1. 一种经改造的病毒包膜蛋白,其包含狒狒内源性病毒(baboon endogenous virus,BaEV)包膜糖蛋白的跨膜结构域和胞外结构域,以及经改造的胞质尾结构域,所述经改造的胞质尾结构域包含鼠白血病病毒(murine leukaemia virus,MLV)包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基,慢病毒蛋白酶的切割序列,以及融合抑制性R肽。A modified viral envelope protein that contains the transmembrane domain and extracellular domain of the baboon endogenous virus (BaEV) envelope glycoprotein, as well as a modified cytoplasmic tail domain. The modified cytoplasmic tail domain includes amino acid residues 1-13 of the cytoplasmic tail domain of murine leukemia virus (MLV) envelope glycoprotein, the cleavage sequence of lentiviral protease, and fusion inhibition Sexual R peptide.
  2. 权利要求1所述的病毒包膜蛋白,所述经改造的胞质尾结构域由MLV包膜糖蛋白的胞质尾结构域的第1-13位氨基酸残基,慢病毒蛋白酶的切割序列,以及融合抑制性R肽组成。The viral envelope protein of claim 1, wherein the modified cytoplasmic tail domain is composed of amino acid residues 1-13 of the cytoplasmic tail domain of the MLV envelope glycoprotein and the cleavage sequence of lentiviral protease, And composed of fusion inhibitory R peptide.
  3. 权利要求1所述的病毒包膜蛋白,所述慢病毒蛋白酶选自人免疫缺陷病毒HIV(例如,HIV-1,HIV-2)的蛋白酶;优选地,所述慢病毒蛋白酶为HIV-1蛋白酶。The viral envelope protein of claim 1, the lentiviral protease is selected from the protease of human immunodeficiency virus HIV (for example, HIV-1, HIV-2); preferably, the lentiviral protease is HIV-1 protease .
  4. 权利要求1所述的病毒包膜蛋白,其中,所述慢病毒蛋白酶的切割序列为天然的HIV-1蛋白酶切割序列或人工合成的HIV-1蛋白酶切割序列。The viral envelope protein of claim 1, wherein the cleavage sequence of the lentiviral protease is a natural HIV-1 protease cleavage sequence or a synthetic HIV-1 protease cleavage sequence.
  5. 权利要求1-4任一项所述的病毒包膜蛋白,其中,所述慢病毒蛋白酶的切割序列具有如SEQ ID NO:1或SEQ ID NO:3所示的氨基酸序列。The viral envelope protein of any one of claims 1-4, wherein the cleavage sequence of the lentiviral protease has the amino acid sequence shown in SEQ ID NO: 1 or SEQ ID NO: 3.
  6. 权利要求1-5所述的病毒包膜蛋白,其中,所述融合抑制性R肽选自MLV包膜糖蛋白的融合抑制性R肽;优选地,所述融合抑制性R肽具有如SEQ ID NO:6所示的氨基酸序列。The viral envelope protein of claims 1-5, wherein the fusion inhibitory R peptide is selected from the fusion inhibitory R peptide of MLV envelope glycoprotein; preferably, the fusion inhibitory R peptide has a value such as SEQ ID The amino acid sequence shown in NO:6.
  7. 权利要求1-6所述的病毒包膜蛋白,其中,所述MLV包膜糖蛋白的胞质尾结构域具有如SEQ ID NO:5所示的氨基酸序列。The viral envelope protein of claims 1-6, wherein the cytoplasmic tail domain of the MLV envelope glycoprotein has the amino acid sequence shown in SEQ ID NO: 5.
  8. 权利要求1-7所述的病毒包膜蛋白,其中,所述经改造的胞质尾结构域具有如SEQ ID NO:42或SEQ ID NO:43所示的氨基酸序列。The viral envelope protein of claims 1-7, wherein the modified cytoplasmic tail domain has an amino acid sequence as shown in SEQ ID NO: 42 or SEQ ID NO: 43.
  9. 权利要求1-8所述的病毒包膜蛋白,其中,所述BaEV包膜糖蛋白的胞外结构域具有如SEQ ID NO:35所示的氨基酸序列;The viral envelope protein of claims 1-8, wherein the extracellular domain of the BaEV envelope glycoprotein has the amino acid sequence shown in SEQ ID NO: 35;
    优选地,所述BaEV包膜糖蛋白的跨膜结构域具有如SEQ ID NO:45所示的氨基酸序列。Preferably, the transmembrane domain of the BaEV envelope glycoprotein has the amino acid sequence shown in SEQ ID NO: 45.
  10. 权利要求1-9所述的病毒包膜蛋白,其中,所述经改造的病毒包膜蛋白具有如SEQ ID NO:14或16所示的氨基酸序列。The viral envelope protein of claims 1-9, wherein the modified viral envelope protein has an amino acid sequence as shown in SEQ ID NO: 14 or 16.
  11. 一种多核苷酸,其包含编码权利要求1-10任一项所述的经改造的病毒包膜蛋白的核苷酸序列。A polynucleotide comprising a nucleotide sequence encoding the engineered viral envelope protein of any one of claims 1-10.
  12. 一种载体,其包含权利要求11所述的多核苷酸;A vector comprising the polynucleotide of claim 11;
    优选地,所述载体选自质粒,噬菌粒,柯斯质粒,病毒载体(例如逆转录酶病毒载体(例如慢病毒载体)、腺病毒载体);Preferably, the vector is selected from plasmids, phagemids, cosmids, viral vectors (such as retroviral vectors (such as lentiviral vectors), adenoviral vectors);
    优选地,所述载体还包含形成慢病毒颗粒所需的基因,例如gag基因和/或pol基因;Preferably, the vector also contains genes required to form lentiviral particles, such as gag genes and/or pol genes;
    优选地,所述载体还包含编码慢病毒蛋白酶的核苷酸序列;Preferably, the vector further comprises a nucleotide sequence encoding a lentiviral protease;
    优选地,所述慢病毒蛋白酶选自HIV(例如,HIV-1,HIV-2)的蛋白酶;Preferably, the lentiviral protease is selected from the protease of HIV (e.g., HIV-1, HIV-2);
    优选地,所述慢病毒蛋白酶为HIV-1蛋白酶;Preferably, the lentiviral protease is HIV-1 protease;
    优选地,所述慢病毒蛋白酶能够识别并切割所述经改造的胞质尾结构域中的所述慢病毒蛋白酶的切割序列。Preferably, the lentiviral protease is capable of recognizing and cleaving the cleavage sequence of the lentiviral protease in the engineered cytoplasmic tail domain.
  13. 一种宿主细胞,其包含权利要求11所述的多核苷酸或者权利要求12的载体。A host cell comprising the polynucleotide of claim 11 or the vector of claim 12.
  14. 制备权利要求1-10任一项所述的经改造的病毒包膜蛋白的方法,其包括,在允许蛋白表达的条件下培养权利要求13的宿主细胞。The method for preparing the modified viral envelope protein of any one of claims 1-10, which includes culturing the host cell of claim 13 under conditions that allow protein expression.
  15. 一种假型化病毒样颗粒,其包含权利要求1-10任一项所述的经改造的病毒包膜蛋白;A pseudotyped virus-like particle comprising the modified viral envelope protein according to any one of claims 1-10;
    优选地,所述假型化病毒样颗粒为慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒);Preferably, the pseudotyped virus-like particles are lentivirus virus-like particles (such as HIV virus-like particles or SIV virus-like particles);
    优选地,所述假型化病毒样颗粒还包含(例如包装有)目的核酸分子;Preferably, the pseudotyped virus-like particles further comprise (e.g., are packaged with) a nucleic acid molecule of interest;
    优选地,所述目的核酸分子包含目的基因;优选地,所述目的基因编码目的蛋白(例如,嵌合抗原受体);Preferably, the nucleic acid molecule of interest contains a gene of interest; preferably, the gene of interest encodes a protein of interest (for example, a chimeric antigen receptor);
    优选地,所述嵌合抗原受体包含抗原结合结构域,跨膜区和胞内区;Preferably, the chimeric antigen receptor comprises an antigen-binding domain, a transmembrane region and an intracellular region;
    优选地,所述抗原结合结构域包含能够特异性结合抗原(例如肿瘤抗原,例如B细胞成熟抗原(BCMA))的重链可变区和轻链可变区;优选地,所述抗原结合结构域是scFv;Preferably, the antigen-binding domain comprises a heavy chain variable region and a light chain variable region capable of specifically binding an antigen, such as a tumor antigen, such as B-cell maturation antigen (BCMA); preferably, the antigen-binding structure Domain is scFv;
    优选地,所述重链可变区的氨基酸序列为SEQ ID NO:20;Preferably, the amino acid sequence of the heavy chain variable region is SEQ ID NO: 20;
    优选地,所述轻链可变区的氨基酸序列为SEQ ID NO:22;Preferably, the amino acid sequence of the light chain variable region is SEQ ID NO: 22;
    优选地,所述跨膜区包含CD8的跨膜结构域;Preferably, the transmembrane region includes the transmembrane domain of CD8;
    优选地,所述胞内区包含CD137(也称为4-1BB)的胞内信号结构域和/或CD3ζ的胞内信号结构域;Preferably, the intracellular region comprises the intracellular signaling domain of CD137 (also known as 4-1BB) and/or the intracellular signaling domain of CD3ζ;
    优选地,所述嵌合抗原受体包含抗BCMA的scFv,CD8的铰链区,CD8的跨膜结构域,CD137的胞内信号结构域和CD3ζ的胞内信号结构域;优选地,所述嵌合抗原受体还包含IL-15,其例如可以通过自剪切多肽P2A与所述CD3ζ的胞内信号结构域相连接;优选地,所述嵌合抗原受体具有如SEQ ID NO:40所示的氨基酸序列。Preferably, the chimeric antigen receptor includes an anti-BCMA scFv, a hinge region of CD8, a transmembrane domain of CD8, an intracellular signaling domain of CD137 and an intracellular signaling domain of CD3ζ; preferably, the chimeric antigen receptor The chimeric antigen receptor also includes IL-15, which can, for example, be connected to the intracellular signaling domain of CD3ζ through self-cleaving polypeptide P2A; Preferably, the chimeric antigen receptor has the structure shown in SEQ ID NO: 40 The amino acid sequence shown.
  16. 一种免疫细胞,其包含或感染了权利要求15的假型化病毒样颗粒;An immune cell comprising or infected with the pseudotyped virus-like particle of claim 15;
    优选地,所述免疫细胞为哺乳动物(例如,人)的免疫细胞(例如,T细胞,B细胞,NK细胞);Preferably, the immune cells are mammalian (eg, human) immune cells (eg, T cells, B cells, NK cells);
    优选地,所述免疫细胞为NK细胞。Preferably, the immune cells are NK cells.
  17. 一种药物组合物,其包含药学上可接受的载体、稀释剂、或赋形剂,以及选自下述中的一项或多项:A pharmaceutical composition comprising a pharmaceutically acceptable carrier, diluent, or excipient, and one or more selected from the following:
    (1)权利要求1-10任一项的经改造的病毒包膜蛋白;(1) The modified viral envelope protein of any one of claims 1-10;
    (2)权利要求11的多核苷酸;(2) The polynucleotide of claim 11;
    (3)权利要求12的载体;(3) The carrier of claim 12;
    (4)权利要求15的假型化病毒样颗粒;和(4) The pseudotyped virus-like particle of claim 15; and
    (5)权利要求16的免疫细胞。(5) The immune cell of claim 16.
  18. 一种试剂盒,其包含,编码权利要求1-10任一项的经改造的病毒包膜蛋白的第一核酸分子;任选地,其还包含选自下述中的一项或多项:A kit comprising a first nucleic acid molecule encoding the modified viral envelope protein of any one of claims 1-10; optionally, it further comprises one or more selected from the following:
    (1)含有形成慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)所需的基因或元件的一个或多个辅助核酸分子;优选地,所述一个或多个辅助核酸分子包含gag基因和/或pol基因;优选地,所述一个或多个辅助核酸分子还包含编码慢病毒蛋白酶的核苷酸序列;优选地,所述慢病毒蛋白酶能够识别并切割所述经改造的胞质尾结构域中的所述慢病毒蛋白酶的切割序列;(1) One or more auxiliary nucleic acid molecules containing genes or elements required to form lentiviral virus-like particles (such as HIV virus-like particles or SIV virus-like particles); preferably, the one or more auxiliary nucleic acid molecules comprise gag gene and/or pol gene; preferably, the one or more auxiliary nucleic acid molecules also include a nucleotide sequence encoding a lentiviral protease; preferably, the lentiviral protease can recognize and cleave the modified cell The cleavage sequence of the lentiviral protease in the plasmoidal domain;
    (2)包含目的基因的目的核酸分子;优选地,所述目的基因编码目的蛋白(例如,嵌合抗原受体);(2) A nucleic acid molecule of interest containing a gene of interest; preferably, the gene of interest encodes a protein of interest (for example, a chimeric antigen receptor);
    任选地,所述试剂盒还包含用于将核酸分子转移入宿主细胞中的试剂,和/或,用于插入核酸分子的载体;优选地,所述宿主细胞为哺乳动物(例如,人)的细胞;优选地,所述宿主细胞为293T细胞;任选地,所述试剂盒还包含宿主细胞;Optionally, the kit further includes reagents for transferring nucleic acid molecules into host cells, and/or vectors for inserting nucleic acid molecules; preferably, the host cell is a mammal (e.g., human) cells; preferably, the host cell is 293T cell; optionally, the kit also contains a host cell;
    优选地,所述一个或多个辅助核酸分子包含于相同的载体或不同的载体中;Preferably, the one or more auxiliary nucleic acid molecules are contained in the same vector or different vectors;
    优选地,所述一个或多个辅助核酸分子与所述第一核酸分子包含于相同的载体或不同的载体中。Preferably, the one or more auxiliary nucleic acid molecules and the first nucleic acid molecule are comprised in the same vector or in different vectors.
  19. 制备权利要求15的假型化病毒样颗粒的方法,其包括:A method for preparing the pseudotyped virus-like particles of claim 15, comprising:
    (a)用下述物质转染宿主细胞:(a) Transfect host cells with:
    (1)编码权利要求1-10任一项的经改造的病毒包膜蛋白的第一核酸分子;(1) The first nucleic acid molecule encoding the modified viral envelope protein of any one of claims 1-10;
    (2)含有形成慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)所需的基因或元件的一个或多个辅助核酸分子;优选地,所述一个或多个辅助核酸分子包含gag基因和pol基因;和(2) One or more auxiliary nucleic acid molecules containing genes or elements required to form lentiviral virus-like particles (such as HIV virus-like particles or SIV virus-like particles); preferably, the one or more auxiliary nucleic acid molecules comprise gag gene and pol gene; and
    (3)任选地,包含目的基因的目的核酸分子;优选地,所述目的基因编码目的蛋白(例如,嵌合抗原受体);(3) Optionally, a nucleic acid molecule of interest comprising a gene of interest; preferably, the gene of interest encodes a protein of interest (for example, a chimeric antigen receptor);
    (b)在允许蛋白表达的条件下培养所述宿主细胞,以产生假型化病毒样颗粒;(b) culturing the host cell under conditions that allow protein expression to produce pseudotyped virus-like particles;
    优选地,所述细胞为哺乳动物(例如,人)的细胞;优选地,所述细胞为293T细胞。Preferably, the cells are mammalian (eg, human) cells; preferably, the cells are 293T cells.
  20. 权利要求1-10任一项的经改造的病毒包膜蛋白,或者权利要求11的多核苷酸,或者权利要求12的载体,或者权利要求15的假型化病毒样颗粒,或者权利要求16的免疫细胞在制备药物中的用途,所述药物用于在受试者中预防和/或治疗疾病;The modified viral envelope protein of any one of claims 1 to 10, or the polynucleotide of claim 11, or the vector of claim 12, or the pseudotyped virus-like particle of claim 15, or the polynucleotide of claim 16 The use of immune cells in the preparation of medicaments for preventing and/or treating diseases in a subject;
    优选地,所述疾病是能够被所述目的核酸分子预防或治疗的疾病;或者,所述假型化病毒样颗粒中包含(包装)的目的核酸分子对所述疾病具有预防或治疗效果;Preferably, the disease is a disease that can be prevented or treated by the target nucleic acid molecule; or, the target nucleic acid molecule contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease;
    优选地,所述疾病选自病毒感染、细菌感染、肿瘤、炎性疾病或自身免疫性疾病;Preferably, the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases or autoimmune diseases;
    优选地,药物还包含另外的药学活性剂;Preferably, the medicament also contains an additional pharmaceutically active agent;
    优选地,所述另外的药学活性剂是具有抗肿瘤活性的药物,例如烷化剂、有丝分裂抑制剂、抗肿瘤抗生素、抗代谢物、拓扑异构酶抑制剂、酪氨酸激酶抑制剂、放射性核素剂、放射增敏剂、抗血管生成剂、细胞因子、分子靶向药物、免疫检查点抑制剂或溶瘤病毒;Preferably, the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitotic inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine kinase inhibitors, radioactive Nuclides, radiosensitizers, anti-angiogenic agents, cytokines, molecular targeted drugs, immune checkpoint inhibitors or oncolytic viruses;
    优选地,所述受试者为哺乳动物,例如人。Preferably, the subject is a mammal, such as a human.
  21. 权利要求1-10任一项的包膜蛋白用于制备假型化病毒样颗粒的用途;Use of the envelope protein of any one of claims 1 to 10 for preparing pseudotyped virus-like particles;
    优选地,所述假型化病毒样颗粒能够感染免疫细胞(例如,T细胞,B细胞,NK细胞);Preferably, the pseudotyped virus-like particles are capable of infecting immune cells (e.g., T cells, B cells, NK cells);
    优选地,所述假型化病毒样颗粒为慢病毒病毒样颗粒(例如HIV病毒样颗粒或SIV病毒样颗粒)。Preferably, the pseudotyped virus-like particles are lentivirus virus-like particles (eg, HIV virus-like particles or SIV virus-like particles).
  22. 权利要求15的假型化病毒样颗粒用于将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的用途或用于制备将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的药物的用途;Use of the pseudotyped virus-like particles of claim 15 for transferring nucleic acid molecules of interest to immune cells (e.g., T cells, B cells, NK cells) or for preparing transfer of nucleic acid molecules of interest to immune cells (e.g., The use of drugs in T cells, B cells, NK cells);
    优选地,所述目的核酸分子包含在载体中;Preferably, the nucleic acid molecule of interest is contained in a vector;
    优选地,所述目的核酸分子编码目的蛋白,例如嵌合抗原受体。Preferably, the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor.
  23. 一种将目的核酸分子转移至免疫细胞(例如,T细胞,B细胞,NK细胞)中的方法,其包括,用权利要求15的假型化病毒样颗粒感染所述免疫细胞,其中,所述假型化病毒样颗粒包含(包装有)所述目的核酸分子;A method of transferring a nucleic acid molecule of interest into immune cells (e.g., T cells, B cells, NK cells), which includes infecting the immune cells with the pseudotyped virus-like particles of claim 15, wherein, Pseudotyped virus-like particles contain (package) the nucleic acid molecule of interest;
    优选地,所述目的核酸分子包含在载体中;Preferably, the nucleic acid molecule of interest is contained in a vector;
    优选地,所述目的核酸分子编码目的蛋白,例如嵌合抗原受体;Preferably, the nucleic acid molecule of interest encodes a protein of interest, such as a chimeric antigen receptor;
    优选地,所述方法在体外,离体或在体内进行。Preferably, the method is performed in vitro, ex vivo or in vivo.
  24. 一种预防或治疗受试者的疾病的方法,所述方法包括向所述受试者施用预防或治疗有效量的权利要求15的假型化病毒样颗粒或权利要求16的免疫细胞或权利要求17的药物组合物或权利要求18的试剂盒;A method of preventing or treating a disease in a subject, the method comprising administering to the subject a prophylactically or therapeutically effective amount of the pseudotyped virus-like particle of claim 15 or the immune cell of claim 16 or the immune cell of claim 16 The pharmaceutical composition of 17 or the kit of claim 18;
    优选地,所述疾病是能够被所述目的核酸分子预防或治疗的疾病;或者,所述假型化病毒样颗粒中包含(包装)的目的核酸分子对所述疾病具有预防或治疗效果;Preferably, the disease is a disease that can be prevented or treated by the target nucleic acid molecule; or, the target nucleic acid molecule contained (packaged) in the pseudotyped virus-like particles has a preventive or therapeutic effect on the disease;
    优选地,所述疾病选自病毒感染、细菌感染、肿瘤、炎性疾病和自身免疫性疾病;Preferably, the disease is selected from viral infections, bacterial infections, tumors, inflammatory diseases and autoimmune diseases;
    优选地,所述受试者为哺乳动物,例如人;Preferably, the subject is a mammal, such as a human;
    优选地,所述方法还包括,对所述受试者施用另外的药学活性剂;Preferably, the method further comprises administering to the subject an additional pharmaceutically active agent;
    优选地,所述另外的药学活性剂是具有抗肿瘤活性的药物,例如烷化剂、有丝分裂抑制剂、抗肿瘤抗生素、抗代谢物、拓扑异构酶抑制剂、酪氨酸激酶抑制剂、放射性核素剂、放射增敏剂、抗血管生成剂、细胞因子、分子靶向药物、免疫检查点抑制剂或溶瘤病毒。Preferably, the additional pharmaceutically active agent is a drug with anti-tumor activity, such as alkylating agents, mitotic inhibitors, anti-tumor antibiotics, antimetabolites, topoisomerase inhibitors, tyrosine kinase inhibitors, radioactive Nuclides, radiosensitizers, anti-angiogenic agents, cytokines, molecular targeted drugs, immune checkpoint inhibitors or oncolytic viruses.
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