WO2023105295A2 - Urine mirna marker for renal cancer diagnosis, diagnostic reagent and kit - Google Patents

Urine mirna marker for renal cancer diagnosis, diagnostic reagent and kit Download PDF

Info

Publication number
WO2023105295A2
WO2023105295A2 PCT/IB2022/020080 IB2022020080W WO2023105295A2 WO 2023105295 A2 WO2023105295 A2 WO 2023105295A2 IB 2022020080 W IB2022020080 W IB 2022020080W WO 2023105295 A2 WO2023105295 A2 WO 2023105295A2
Authority
WO
WIPO (PCT)
Prior art keywords
mir
hsa
mirna
urine
kidney cancer
Prior art date
Application number
PCT/IB2022/020080
Other languages
French (fr)
Chinese (zh)
Other versions
WO2023105295A3 (en
Inventor
陈阳
蒋贝尔
郭辉
杜晴晴
张盼
张楠
程赫
邹瑞阳
刘昊
Original Assignee
觅瑞(杭州)生物科技有限公司
觅瑞实验室私人有限公司
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 觅瑞(杭州)生物科技有限公司, 觅瑞实验室私人有限公司 filed Critical 觅瑞(杭州)生物科技有限公司
Publication of WO2023105295A2 publication Critical patent/WO2023105295A2/en
Publication of WO2023105295A3 publication Critical patent/WO2023105295A3/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • C12N2310/14Type of nucleic acid interfering N.A.
    • C12N2310/141MicroRNAs, miRNAs
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/178Oligonucleotides characterized by their use miRNA, siRNA or ncRNA

Definitions

  • Renal cell carcinoma is a malignant tumor originating from renal tubular epithelium, accounting for 80-90% of renal malignant tumors - the incidence of renal cell carcinoma is second only to prostate cancer and bladder cancer, accounting for Urinary system tumors ranked third.
  • the most common histopathological type of RCC is clear cell carcinoma, which accounts for 75-80% of all RCC, and about 90,000 deaths worldwide each year. The incidence of RCC has gradually increased over the past decades.
  • RCC RCC's mortality rate remains high, it is a salvageable disease until metastases occur.
  • detection of cancer cells in early stages is challenging due to the lack of early symptoms, inability to correctly differentiate between benign and malignant masses by imaging or needle biopsy, and therefore, the development of innovative methods for early RCC detection is required. non-invasive method.
  • CAIX carbonic anhydrase IX
  • VEGF vascular endothelial growth factor
  • hypoxia-inducible factor hypoxia-inducible factor
  • HIF hypoxia-inducible factor
  • KI67, P53, P2L PTEN phosphatase and tensin homolog
  • E-Cadherin osteopontin and CD44
  • CXCR4 CXCR4 and other cell cycle and proliferation markers.
  • miRNA is a short non-coding RNA with a length of 18-25 nucleotides, which can prevent protein expression by decomposing specific target mRNA or inhibiting its translation, and participate in the regulation of individual development, cell apoptosis, proliferation and differentiation and other life activities. In the occurrence and development of tumors, they play a role similar to oncogenes or tumor suppressor genes.
  • the expression profile of miRNA has obvious tissue specificity, and has specific expression patterns in different tumors.
  • Patent US10457994B2 discloses a A combination of miRNA markers that can predict the metastasis and prognosis of clear cell renal cell carcinoma, miR-10b, miR-139-5p, miR-130b and miR-199b-5p; miR-199b-5p and miR-130b are in the metastasis miR-10b and miR-139-5p were downregulated in metastatic RCC.
  • the technical problem to be solved by the present invention is to provide a urinary miRNA marker, diagnostic reagent and kit for kidney cancer diagnosis, which has higher population specificity than other miRNA markers reported internationally;
  • the disclosed miRNA diagnostic markers and their combinations are proposed for the first time, which are more reliable than other miRNA molecular markers, and provide a new alternative way for the diagnosis of kidney cancer.
  • the present invention provides a urine miRNA marker for kidney cancer diagnosis, which is selected from any one or more of the following 8 miRNAs: hsa-miR-671 -3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-4306>hsa -miR-1-3p o
  • the urine miRNA marker can be selected from any one or more of the following 7 miRNAs: hsa-miR-671-3p ⁇ hsa-miR-518e- 5p ⁇ hsa-miR-153-3p>hsa-miR-21-3p ⁇ hsa-miR-331-5p ⁇ hsa-miR-885-5p>
  • the urine miRNA marker can be selected from at least 2 of the following 5 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR -21-3p> hsa-miR-331-5p o hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-153-3p ⁇ hsa-miR-21-3p ⁇ hsa-miR-885 -5p 0 hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-331-5p>hsa-miR-885-5p o hsa-miR-671-3p > hsa-miR-518e-5p, hsa-miR-671-3
  • the urine miRNA marker can be selected from at least 2 of the following 4 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-21-3p o hsa -miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-331-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-885-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-331-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-331-5p o hsa-miR-671-3p>h
  • the urine miRNA marker can be selected from at least 2 of the following 3 miRNAs: hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-153-3p o hsa-miR -671-3p> hsa-miR-518e-5p, hsa-miR-21-3p o hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-331-5p o hsa-miR-671 -3p> hsa-miR-518e-5p, hsa-miR-885-5p o hsa-miR-671-3p>hsa-miR-153-3p> hsa-miR-21-3p o hsa-miR-671-3p >hsa-miR-153-3p> hsa-m
  • the urine miRNA marker can be selected from the following two miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p. hsa-miR-671-3p> hsa-miR-153-3p o hsa-miR-671-3p> hsa-miR-21-3p o hsa-miR-671-3p> hsa-miR-885-5p o hsa- miR-518e-5p > hsa-miR-21-3p o hsa-miR-518e-5p > hsa-miR-331-5p 0 hsa-miR-518e-5p > hsa-miR-885-5p 0 hsa-miR- 153-3p> hsa-miR-21-3p o Instructions hsa-miR-153-3p> hsa-miR
  • the urine miRNA marker can be selected from the following 1 miRNA: hsa-miR hsa-miR in some
  • the characteristics are: when the urine miRNA marker can be selected from hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331- 5p> hsa-miR-885-5p ⁇ hsa-miR-4306 ⁇ hsa-miR-1-3p
  • the urine miRNA marker can be selected from hsa-miR-671- 3p ⁇ hsa-miR-518e-5p hsa-miR-153-3p
  • the above is selected from hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-4306, hsa-miR-l-3p at least 2 of the 8 miRNAs, and contain specific miRNAs (such as hsa-miR-518e -5p or hsa-miR-1-3p) ?
  • Urinary miRNA markers whose AUC value is not less than 0.681, including but not limited to the following combinations, can be used as a preferred embodiment:
  • the urine miRNA marker can be selected from at least 2 of the following 8 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p>hsa-miR- 21-3p ⁇ hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR-4306 ⁇ hsa-miR-l- 3p0
  • the urine miRNA marker can be selected from at least 2 of the following 7 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p ⁇ hsa-miR- 21-3p ⁇ hsa-miR-331-5p ⁇ hsa-miR-885-5p>hsa-miR-4306; Instructions hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p ⁇ hsa-miR-331-5p, hsa-miR-885-5p>hsa- miR-1-3p; hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p ⁇ hsa-miR
  • the urine miRNA marker can be selected from at least 2 of the following 6 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p ⁇ hsa-miR -21-3p ⁇ hsa-miR-331-5p, hsa-miR-4306; hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p ⁇ hsa-miR-21-3p >hsa-miR-331-5p ⁇ hsa-miR-l-3p; hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p ⁇ hsa-miR-21-3p ⁇ hsa -miR-331-5p hsa-miR-885-5p; hsa
  • the urine miRNA marker can be selected from at least 2 of the following 5 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR -21-3p>hsa-miR-331-5p;hsa-miR-671-3p>hsa-miR-518e-5p,hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-885-5p;hsa-miR-671-3p>hsa-miR-518e-5p,hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306;hsa-miR-671-3p>hsa -miR-518e-5p, hsa-miR-21-3p>hsa-miR-331
  • the urine miRNA marker can be selected from at least 2 of the following 4 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21-3p>hsa-miR -331-5p; hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p; hsa-miR-518e-5p, hsa-miR-153 -3p>hsa-miR-21-3p>hsa-miR-885-5p; hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306; hsa -miR-518e-5p, hsa-miR-21-3p>hsa-miR
  • the urine miRNA marker can be selected from at least 2 of the following 3 miRNAs: hsa-miR-518e-5p > hsa-miR-21-3p >hsa-miR-331-5p; the following types Urine miRNA markers consisting of 3 to 8 miRNAs with an AUC value of 30.681 have a common feature that they all include at least hsa-miR-518e-5p, hsa-miR-21-3p, and hsa-miR-331-5p:
  • the urine miRNA marker may be composed of the following 8 miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa- miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p > hsa-miR-4306 > hs
  • the urine miRNA The marker can be composed of the following seven miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-4306 o
  • the urine miRNA marker may be composed of the following seven miRNAs: hsa-miR-671-3p, hsa-miR- 518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-1-3p o
  • the urine miRNA marker can be composed of the following 6 miRNAs: hsa
  • the Urine miRNA markers may consist of the following 4 miRNAs: hsa-miR-518e-5p > hsa-miR-153-3p > hsa-miR-21-3p > hsa-miR-331-5p o
  • the urine miRNA marker may be composed of the following three miRNAs: hsa-miR-518e-5p > hsa-miR-21-3p > hsa-miR-331-5p o
  • the present invention also provides A diagnostic reagent for kidney cancer is provided, including a reagent for specifically detecting one or more urinary miRNA markers as described above.
  • the present invention also provides a diagnostic kit for kidney cancer, including using one or more urinary miRNA markers as described above as a standard, and detecting various urinary miRNA markers as described above corresponding primers.
  • the present invention also provides an application of various urinary miRNA markers as mentioned above, mainly for the preparation of products for early diagnosis and/or recurrence monitoring.
  • the products include but are not limited to devices (such as oligonucleotide probes or their integration, chip substrates or high-throughput miRNA detection chips on detection substrates, and microfluidic detection chips), kits and equipment.
  • the prepared product for early diagnosis and/or recurrence monitoring includes one or more of the following functions:
  • the present invention also provides a method for early diagnosis and/or recurrence monitoring of kidney cancer using one or more urine miRNA markers as described above, including the following steps: Step 1, detecting the the presence of miRNA in the urine sample; step 2, measuring the expression level of at least one miRNA in the miRNA markers in the urine sample; step 3, using the score based on the previously measured miRNA expression level to compare with the reference, by comparing Whether there is a significant difference between the subject sample and the reference sample is used for early diagnosis and/or recurrence monitoring of the possibility of the subject suffering from kidney cancer.
  • the at least one miRNA comprises a combination of urinary miRNA markers as previously described.
  • the expression level of the miRNA is up-regulated or down-regulated in a subject with or at risk of developing kidney cancer compared to a control.
  • the control is selected from subjects without cancer, subjects without kidney cancer, subjects without kidney cancer or subjects without risk of kidney cancer.
  • the methods provided herein also include performing clinical procedures and/or measuring additional biomarkers in biological samples (ie, urine, tissue blood, plasma, serum samples).
  • biomarkers may include but are not limited to carbonic anhydrase IX (CAIX), vascular endothelial growth factor (vascular endothelial growth factor, VEGF), hypoxia-inducible factor (hypoxia-inducible factor, HIF), KI67, P53, P21 , PTEN (phosphatase and tensin homolog, phosphatase and thionin homolog), E-Cadherin, osteopontin and CD44, CXCR4 and other cell cycle and proliferation markers.
  • Clinical procedures may include biopsy, fine needle aspiration, and diagnostic imaging tests including, but not limited to, ultrasound, computed tomography (CT), magnetic resonance imaging (MRI), or positron emission tomography (PET) imaging.
  • CT computed tomography
  • MRI magnetic resonance imaging
  • PET positron emission tomography
  • the present disclosure provides methods of treating a subject determined to have kidney cancer using the methods disclosed herein.
  • Subjects determined to have kidney cancer will be referred to a licensed physician and, where determined appropriate, treated with an appropriate anticancer compound, surgery, targeted therapy, immunotherapy, or radiation therapy, or a combination of these treat.
  • the beneficial effects of the present invention are as follows:
  • the present invention discovers for the first time multiple miRNAs that can detect kidney cancer, such as hsa-miR-518e-5p or hsa-miR-1-3p, which have not been reported in existing literature or patents and can be used to detect kidney cancer.
  • the present invention initially finds 16 miRNA markers that can be used to detect kidney cancer from the urine samples of cancer and healthy control subjects. After further research, it is creatively discovered: When the urine miRNA markers are selected from the following 8 When one or more of these miRNAs were detected, kidney cancer could be significantly differently detected (p ⁇ 0.05): hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa- miR-21-3pAhsa-miR-331-5p ⁇ hsa-miR-885-5p>hsa-miR-4306>hsa-miR-l-3po
  • the present invention also unexpectedly finds that: as long as it is selected from hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p ⁇ Instructions hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p at least 2 of the 6 miRNAs, the urinary miRNA markers, the AUC value will be higher than The AUC value of a single miRNA (such as hsa-miR-518e-5p, etc.); however, when the urine miRNA marker is composed of hsa-miR-518e-5p and hsa-miR-153-3p, its AUC value is 0.561, instead Lower than the AUC value of single hsa-miR-518e-5p.
  • the present invention accidentally found a urine miRNA marker with AUCN0.681 through optimization and screening Liquid miRNA markers, the common features of which are: the urine miRNA markers are selected from hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p >hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-4306, hsa-miR-671-3p, hsa-miR-518e-5p > hsa-miR-153-3p >hsa-miR-21-3p >hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-4306, h
  • the present invention tries to hsa-miR-671-3p, hsa-miR-518e-5p>hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p>hsa-miR- 885-5p is used as a new combination of kidney cancer markers, and the collection and verification of clinical samples are carried out.
  • the results show that the combination of markers has important value in the early detection and diagnosis of kidney cancer.
  • the present invention provides various combinations of urinary miRNA markers, which are easy to operate, highly feasible, high in sensitivity and specificity, and have clinical diagnostic and guiding significance; moreover, the present invention can detect miRNA expression through urine , so as to achieve the purpose of non-invasive.
  • Figure 1 is a heat map of the expression levels of 8 (P ⁇ 0.05) differentially expressed renal cancer miRNA diagnostic markers. miRNA expression levels (copy number/ml) are presented on a log2 scale and normalized to the zero mean. The color of the dots indicates the concentration. Hierarchical clustering was performed for two dimensions (miRNA and sample) based on Euclidean distance. For the horizontal dimension, color is used to represent case-control subjects.
  • Figure 2 is the AUC chart of renal cancer miRNA diagnostic marker combinations in each cohort; among them, Figure 2-A is the AUC chart of 8 renal cancer miRNA diagnostic marker combinations in each cohort, and Figure 2-B is 6 renal cancer miRNAs AUC plots of diagnostic marker combinations in each cohort.
  • Figure 3 is a line box plot of the control and cancer predictive values of the six kidney cancer miRNA diagnostic marker combinations.
  • miRNA refers to microRNAs, ie small non-coding RNA molecules, which contain about 22 nucleotides in some embodiments, and exist in plants, animals and some viruses. miRNAs are known to have functions in RNA silencing and post-transcriptional regulation of gene expression. These highly conserved RNAs regulate gene expression by binding to the 3'-untranslated region (3'-UTR) of specific mRNAs. For example, each miRNA is thought to regulate multiple genes, and since hundreds of miRNA genes are predicted to exist in higher eukaryotes. miRNAs tend to be transcribed from several different loci in the genome. These genes encode long RNAs with hairpin structures, which are processed by a series of RNases manual
  • the term "regulation” refers to the process by which a cell increases or decreases the amount of a cellular component such as RNA or protein in response to an external variable.
  • An increase in a cellular component is referred to as upregulation, while a decrease in a cellular component is referred to as downregulation.
  • the term “dysregulation” or “dysregulation” as used herein means up-regulation or down-regulation.
  • An example of downregulation is a reduction in the number of receptors in a cell for a molecule such as a hormone or neurotransmitter, which reduces the sensitivity of the cell to that molecule. This phenomenon is an example of a locally acting negative feedback mechanism.
  • An example of upregulation is the increased number of cytochrome P450 enzymes in hepatocytes when xenobiotic molecules such as dioxins are administered, causing greater degradation of these molecules. Upregulation and downregulation can also occur in response to toxins or hormones.
  • An example of upregulation in pregnancy is a hormone that causes cells in the uterus to become more sensitive to oxytocin.
  • the term "differential expression” refers to the measurement of a cellular component in comparison to a control or another sample, thereby determining a difference in, for example, concentration, presence or intensity of said cellular component.
  • the results of such comparisons may be given in absolute values, ie, the component is present in the sample but not in the control, or in relative values, ie, the expression or concentration of the component is increased or decreased compared to the control.
  • the term “increase” is synonymous and interchangeable with the term “up-regulation”
  • the term “decrease” is synonymous and interchangeable with the term “down-regulation”.
  • miRNA combination relates to combinations of miRNAs of the invention.
  • the amount of miRNA can be determined in a sample from a subject by techniques well known in the art. Depending on the nature of the sample, the amount can be determined by PCR-based techniques for quantifying the amount of polynucleotides or by other methods such as mass spectrometry or sequencing, among others.
  • probe refers to a single-stranded oligonucleotide commonly used to detect target RNA and/or RNA sequences complementary to the sequence of the probe. probe and nucleotide sequence single-stranded nucleic acid that allows nucleotide pairing due to complementarity between the probe and target sequence
  • the length of the probe depends on the intended use as well as the desired specificity of the probe. Usually, the length of the probe is 20 to 500 (ie 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100, 110, 120, 130, 140, 150, 160, 170, 180 , 190, 200, 300, 400, 500) nucleotides, preferably 20 to 100, more preferably 20 to 50 nucleotides.
  • the probes are 12 to 30 nucleotides.
  • the probes are used in various experimental settings, such as but not limited to Southern and Northern blotting, real-time PCR and in situ hybridization (In Situ Hybridization, ISH), and microarray experiments.
  • Probes may be unlabeled, directly labeled or indirectly labeled, for example with biotin to which the streptavidin complex can subsequently bind.
  • the label may be a molecule detectable by spectroscopic, photochemical, biochemical, immunochemical, chemical or other physical means.
  • suitable labels include 32P, fluorescent dyes, electron-dense reagents, enzymes (eg, commonly used in ELISAs), biotin, digoxigenin, or haptens and others that are or can be made detectable. entity. Labels can be introduced anywhere in the nucleic acid, eg 3', 5' or internally.
  • probe also covers nucleic acids whose backbone composition differs, such as, but not limited to, peptide nucleic acid (PNA), locked nucleic acid (LNA), diol nucleic acid (GNA) and threose nucleic acid (TNA).
  • PNA peptide nucleic acid
  • LNA locked nucleic acid
  • GNA diol nucleic acid
  • TAA threose nucleic acid
  • index and ""Mark” is used interchangeably herein and refers to a sign or signal of a disorder or to monitor a disorder.
  • disorder refers to the biological state of a cell, tissue or organ, or to the state of health and/or disease of an individual.
  • An indicator may be the presence or absence of molecules including, but not limited to, peptides, proteins, and nucleic acids, or may be a change in the expression level or pattern of such molecules in a cell, or in a tissue, organ, or individual.
  • An indicator may be the occurrence, development or presence of a disease in an individual or a sign of the further progression of such a disease.
  • An indicator can also be a sign of the risk of developing a disease in an individual.
  • the term "fraction” refers to an integer or number, which may be determined mathematically, for example, by using computational models known in the art (which may include, but not limited to, SMV as an example), and is determined using many numbers It is calculated by any one of bibliographic equations and/or algorithms to achieve the purpose of statistical classification.
  • Such a score is used to enumerate an outcome over a range of possible outcomes.
  • the relevance and statistical significance of such a score depends on the size and quality of the underlying data set used to establish the range of results.
  • a blind sample can be input into an algorithm, and a score can be calculated based on the information provided by analyzing the blind sample. This enables the scoring of the blind sample to be generated. Based on this score, decisions can be made, such as how likely it is that the patient generating the blind sample has cancer or does not have cancer.
  • the end values of the ranges may be defined logically based on the data provided or arbitrarily defined at the request of the experimenter. In both cases, the range needs to be defined before testing blind samples.
  • expression level refers to the amount of a gene product present in vivo or in a sample at a particular point in time.
  • the expression level can be measured/quantified/detected eg by the protein or mRNA expressed by the gene.
  • Expression levels can be quantified, for example, by using the total amount of the same type of gene product (total protein or mRNA) to normalize the amount of the gene product of interest present in the sample, or to determine the amount of the gene product of interest/defined sample size (weight, volume, etc.).
  • Expression levels can be measured or detected by any method known in the art, such as methods for the direct detection and quantification of the gene product of interest (e.g., mass spectrometry), or typically by a combination of a gene product of interest and a gene specific for the gene product of interest.
  • methods for the direct detection and quantification of the gene product of interest e.g., mass spectrometry
  • a method for the indirect detection and measurement of a gene product of interest that works in combination with one or more different molecular or detection devices (eg, primers, probes, antibodies, protein scaffolds).
  • the detection method for kidney cancer includes the following steps: a) Determination of hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa -miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p; b) compare hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-518e-5p, The expression level of hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hs
  • the sample provider when the expression level of any miRNA in the detected kidney cancer is significantly different from that in the reference sample, the sample provider may have kidney cancer. In a preferred embodiment, when the expression levels of any 8 miRNAs in the tested urine sample are significantly different from the expression levels of miRNAs in the reference sample, the sample provider may suffer from renal cancer. In a more preferred embodiment, when the expression levels of the six miRNAs in the tested urine sample are significantly different from those in the reference sample, the sample provider may suffer from kidney cancer. In the present invention, the reference samples come from healthy human urine samples. On the other hand, the present invention also provides a method for detecting microRNA in renal cancer. Specifically, the method includes reverse transcription and real-time quantitative polymerase chain reaction (RT-qPCR).
  • RT-qPCR real-time quantitative polymerase chain reaction
  • the primer combination used is hsa-miR-671-3p) hsa-miR-518e-5p) hsa-miR-153-3p, hsa-miR-21- 3p, hsa-miR-33 l-5p, hsa-miR-885-5p detection of reverse transcription primers and PCR primer combinations.
  • Appropriate adjustments and modifications can be made to the primer sequences of the present invention according to the sequences of related miRNAs, and these modified primer sequences can still be used to detect the miRNA markers.
  • the present invention also includes these equivalent technical solutions.
  • the present invention uses RT-qPCR method, which has more reliable clinical feasibility and The instruction manual is practical, and the cost is low, and it is easier to popularize.
  • the above-mentioned miRNA detection method is not limited to the RT-qPCR method provided by the present invention, other methods such as sequencing, microarray, northern blotting, bioluminescence and probe methods can also be used to detect the miRNA markers.
  • the applicant found in the research that any 1 miRNA marker combination that can be used for the diagnosis of renal cancer, and any 2-5 miRNA marker combinations that can be used for the diagnosis of renal cancer. Using the above markers, renal cancer can be reliably diagnosed Identification.
  • the present invention found that 8 miRNA markers can detect kidney cancer with significant difference (p ⁇ 0.05): hsa-miR-671-3p> hsa -miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-l -3p; and, after further optimization and screening, a combination of the above-mentioned 8 miRNA markers with an AUC value higher than hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153- Kidney cancer marker combination including 3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hs
  • the specific sequence information is shown in Table 1 below. All miRNA sequences disclosed in the present invention have been stored in the miRBase database (http://www.mirbase.org/) o Table 1. The sequence list of 8 miRNAs The invention discloses a kidney cancer diagnostic marker combination, comprising hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR Multiple nucleic acid molecules of -331-5p>hsa-miR-885-5p.
  • hsa-miR-671-3p, hsa-miR-518e-5p > hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p The expression of any one or any two or any three or any four or any five or any six nucleic acid molecules in the urine of a patient diagnosed with kidney cancer is significantly changed compared to the expression in a control.
  • the above multiple nucleic acid molecules include hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa -6 nucleic acid molecule combinations of miR-331-5p>hsa-miR-885-5p.
  • the miRNAs and methods disclosed herein are useful for making a diagnosis of kidney cancer.
  • a subject who has been diagnosed with kidney cancer using the methods described herein may receive necessary and relevant drugs (e.g., chemotherapeutic agents) as a result of said diagnosis treatment or be arranged for necessary treatment options, such as radiation therapy, surgical resection, targeted therapy, immunotherapy, etc.
  • drugs e.g., chemotherapeutic agents
  • the methods disclosed herein allow for the treatment of subjects diagnosed with renal cancer with compounds and compositions known in the art to be effective in treating renal cancer.
  • a method as disclosed herein results in a subject being diagnosed with kidney cancer, wherein the subject is then administered a treatment for kidney cancer as known in the art.
  • the disclosed method thus enables the treatment of kidney cancer.
  • Example 1 Validation cohort Validation of 8 miRNA combinations for kidney cancer diagnosis 1.
  • the operation process and results of reverse transcription-real-time fluorescent PCR were extracted according to the operation steps of the Zymo Serum Plasma cfDNA Rapid Extraction Kit. After the extraction was completed, reverse transcription was performed using the operation steps of the MIRXE reverse transcription kit After completion, qPCR amplification was performed for quality inspection. After the quality inspection was completed, the samples were amplified by qPCR to detect the expression levels of 312 miRNAs. The expression levels of all 312 miRNAs in cancer and healthy controls were not significantly graded.
  • 16 miRNA markers that can be used to detect kidney cancer were initially found, and further The study found 8 miRNA biomarkers with significant differences in the detection of kidney cancer. After correction, the P values of 8 miRNAs were found to be less than 0.05; among them, 3 were up-regulated and 5 were down-regulated in kidney cancer subjects.
  • Up-regulated miRNAs include: hsa-miR-518e-5p > hsa-miR-153-3p 153 and hsa-miR-21-3p; Down-regulated miRNAs include: hsa-miR-671-3p, hsa-miR-4306, hsa -miR-331-5p, hsa-miR-l-3p and hsa-miR-885-5p o extracted these 8 miRNAs in the research and development team to draw Heatmap heat map, observed that there were differences between cancer and control subjects Significant differences in miRNA expression levels, as shown in Figure 1. III.
  • Example 2 Validation cohort Validation of the optimal 6 miRNA combination R&D cohort for kidney cancer diagnosis.
  • the urine sample requirements, collection and extraction, reverse transcription-real-time fluorescent PCR operation process and results are the same as those described in Example 1, based on For the 8 miRNAs screened out above, the algorithms of Lasso, Stepwise and exhaustive method were used to optimize the miRNA combinations, and finally the optimal 6 miRNA combinations were determined, and the cross-validation (Leave-one-out Cross-validation) method was used Verify hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p > hsa-miR-885-5p included 6 urine biomarker panels.
  • AUC values were calculated for the multi-miRNA panel in the validation cohort for the 8 miRNAs used in the clinical trial (hsa-miR-671-3p > hsa-miR-518e-5p > hsa-miR-153-3p > hsa-miR-21-3p , hsa-miR-331-5p, hsa-miR-885-5p> hsa-miR-4306, hsa-miR-1-3p), choose one miRNA as a non-variable, and then use the non-variable miRNA as a benchmark , to detect the average AUC value of a multivariate combination of 1-, 2-, 3-, 4-, 5-, 6-, 7- or 8-miRNA, and analyze the difference in AUC value.
  • One or more of these miRNAs are then selected and combined with other miRNAs.
  • the example combination in which hsa-miR-518e-5p was used as a fixed miRNA significantly increased AUC after further adding the number of miRNAs (other miRNAs listed in Table 2) (Table 4). However, after adding more than 6 miRNAs, AUC began to decrease slightly. Exemplary combinations with hsa-miR-1-3p and hsa-miR-671-3p are shown in Tables 5 and 6, respectively. As the number of combined miRNAs increases, AUC gradually increases, but AUC begins to decrease when more than 6 miRNAs are combined.
  • the multivariate miRNA combinations composed of hsa-miR-671-3p and hsa-miR-671-3p were described after one, three, four, five or six, and the difference in AUC value was analyzed. The results are shown in Table 6. 6.
  • the present invention establishes a complete workflow for discovering and validating urine miRNA biomarker combinations, and successfully determines biomarkers and biomarker combinations for detecting kidney cancer.
  • the urine miRNA marker combination provided by the present invention is obtained based on statistics, screening, and analysis of clinical test data of human urine samples, so it is suitable for high population-specific detection and has a significant difference in AUC Expressed miRNA combinations; but it does not mean that such miRNA combinations can be generally used in the detection of human-derived plasma or tissue samples.
  • the embodiment described above is only a preferred solution of the present invention, and does not limit the present invention in any form, and there are other variations and modifications on the premise of not exceeding the technical solution described in the claims.

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Plant Pathology (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

Disclosed in the present invention are a urine miRNA marker for renal cancer diagnosis, a kit and a diagnostic reagent. The urine miRNA marker is selected from one or more of the following miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-I-3p. Provided in the present invention are urine miRNA markers of various combinations. The test operation is simple and convenient, the feasibility is high, the sensitivity and the specificity are high, and there is significance in clinical diagnosis and guidance. In addition, by using the present solution, the miRNA expression quantity can be detected using urine, such that the non-invasive purpose is achieved.

Description

说 明 书 肾癌诊断用尿液 miRNA标志物、 诊断试剂及试剂盒 技术领域 本发明涉及分子诊断技术领域, 特别涉及一种肾癌诊断用尿液 miRNA标志物、 诊断试 剂及试剂盒。 背景技术 肾细胞癌 (renal cell carcinoma, RCC, 简称肾癌) 是起源于肾小管上皮的恶性肿瘤, 占 肾脏恶性肿瘤的 80-90% - 肾癌发病率仅次于前列腺癌及膀胱癌, 占泌尿系统肿瘤第三位。 肾 癌的组织病理类型最常见的为透明细胞癌, 占所有 RCC的 75-80%, 每年全球约 90000死亡 病例。 在过去的几十年里, RCC的发病率逐渐增加。 尽管 RCC的死亡率在高水平维持, 但 是在没有发生转移之前, 它是一种可补救的疾病。 临床上, 已经表明 RCC通常对化疗和放射 治疗具有抗性, 并且肿瘤切除仍然是唯一明确的治疗方法。 在治愈性肾切除术后, 近 55% 的 RCC患者存活。然而, 由于缺乏早期症状, 通过成像或穿刺活检, 患早期症状和良性和恶 性肿块之间的不能正确区别, 检测早期阶段的癌细胞很具有挑战性, 因此, 需要开发针对早 期 RCC检测的创新的非侵入性方法。 最近, 许多分子标记如碳酸酉干酶 IX (carbonic anhydrase IX, CAIX), 血管内皮生长因子 ( vascular endothelial growth factor, VEGF ) , 缺氧诱导因子 ( hypoxia-inducible factor, HIF ) , KI67, P53, P2L PTEN (phosphatase and tensin homolog,磷酸酶和硫素同源物), E-Cadherin, 骨桥蛋白和 CD44, CXCR4和其他细胞周期和增殖标记物。这些潜在的 RCC生物标志物都没 有明显提高当前预后系统的预测准确性, 多数没有经过大规模的验证, 并且在常规临床实践 中没有建议使用上述的标志物。到目前为止,没有鉴定出高效的针对 RCC的早期诊断生物标 志物, 导致疾病的晚期检测和治疗效果差。 因此, 鉴定可改善 RCC 患者早期诊断和预后的 RCC 生物标志物是癌症治疗的重要焦点。 miRNA 是长度为 18-25个核昔酸的短非编码 RNA,可以通过特定目标 mRNA的分解或 通过抑制其翻译来阻止蛋白质表达, 参与调控个体发育、细胞凋亡、增殖及分化等生命活动, 在肿瘤的发生和发展过程中发挥着类似于致癌基因或抑癌基因的功能。 miRNA的表达谱具有 明显的组织特异性, 在不同肿瘤中具有特定的表达模式。 这些特点都使得 miRNA有可能成 为肿瘤诊断新的生物学标记和治疗靶标。 虽然许多研究已经评估了 RCC患者组织和血清中的 miRNA表达, 但是能用于肾癌筛查 的尿液 miRNA生物标志物以及生物标志物组合标志物还未见定论, 例如: 专利 US10457994B2公开了一种可预测透明细胞肾细胞癌转移和预后的 miRNA标志物组 合, 为 miR-10b、 miR-139-5p、 miR-130b和 miR-199b-5p; 其中 miR-199b-5p和 miR-130b在 转移性肾癌中过表达, miR-10b和 miR-139-5p在转移性肾癌中下调。 文献 microRNA-210-3p depletion by CRISPR/Cas9 promoted tumorigenesis through revival of TWIST 1 in renal cell carcinoma ( Hirofumi Yoshino, et. Oncotarget, 2017,8(13):20881-20894.) 公开了在透明细胞肾细胞癌中起上调作用的 5种 miRNA标志物,为: miR-885-5p> miR-1274、 miR-210-3p、 miR-224和 miR-1290。 综上所述, 鉴于现有技术尚未有明确的定论选择何种单一的 miRNA标志物或 miRNA标 说 明 书 志物组合来准确、 有效的预测或诊断肾细胞癌, 且 miRNA标志物的样品收集途径来源于尿 液, 还是血浆, 抑或是组织, 方法不一, 也无定论; 故本领域技术人员急需开发出适合于肾 癌诊断用、 且具有较高的人群特异性的尿液 miRNA标志物组合。 发明内容 本发明的要解决的技术问题在于提供一种肾癌诊断用尿液 miRNA标志物、 诊断试剂及 试剂盒,相对国际上报道的其它 miRNA标志物,具备有更高的人群特异性;所公开的 miRNA 诊断标志物及其组合为首次提出, 相较于其他 miRNA分子标志物更可靠, 为肾癌诊断提供 了一种全新的可选途径。 为解决上述技术问题, 本发明提供的技术方案具体如下: 本发明提供了一种肾癌诊断用尿液 miRNA标志物,选自如下 8个 miRNA中的任意一个 或多个: hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-4306> hsa-miR-l-3po 在一些实施方案中,所述的尿液 miRNA标志物可以选自如下 7个 miRNA中的任意一个 或多个: hsa-miR-671-3p^ hsa-miR-518e-5p^ hsa-miR-153-3p> hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p> hsa-miR-l-3po 在一些实施方案中,所述的尿液 miRNA标志物可以选自如下 7个 miRNA中的任意一个 或多个: hsa-miR-671-3px hsa-miR-518e-5p^ hsa-miR-153-3p> hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p> hsa-miR-4306o 在一些实施方案中,所述的尿液 miRNA标志物可以选自如下 6个 miRNA中的任意一个 或多个: hsa-miR-671-3p、 hsa-miR-518e-5p> hsa-miR-153-3p、 hsa-miR-21-3p^ hsa-miR-331-5p> hsa-miR-885-5p0 本发明中, 上述选自 hsa-miR-671-3p> hsa-miR-518e-5p hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p这 6个 miRNA中的至少 2个, 所构成的尿液 miRNA标志 物, 其 AUC值高于单个 miRNA (如 hsa-miR-518e-5p或 hsa-miR13p) 的, 包括但不限于如 下的组合, 均可作为优选的实施方案: Description Urinary miRNA markers, diagnostic reagents and kits for kidney cancer diagnosis Technical Field The present invention relates to the technical field of molecular diagnosis, in particular to a urinary miRNA markers, diagnostic reagents and kits for kidney cancer diagnosis. Background Art Renal cell carcinoma (RCC, referred to as renal cell carcinoma) is a malignant tumor originating from renal tubular epithelium, accounting for 80-90% of renal malignant tumors - the incidence of renal cell carcinoma is second only to prostate cancer and bladder cancer, accounting for Urinary system tumors ranked third. The most common histopathological type of RCC is clear cell carcinoma, which accounts for 75-80% of all RCC, and about 90,000 deaths worldwide each year. The incidence of RCC has gradually increased over the past decades. Although RCC's mortality rate remains high, it is a salvageable disease until metastases occur. Clinically, it has been shown that RCC is often resistant to chemotherapy and radiotherapy, and tumor resection remains the only definitive treatment. After curative nephrectomy, nearly 55% of RCC patients survive. However, detection of cancer cells in early stages is challenging due to the lack of early symptoms, inability to correctly differentiate between benign and malignant masses by imaging or needle biopsy, and therefore, the development of innovative methods for early RCC detection is required. non-invasive method. Recently, many molecular markers such as carbonic anhydrase IX (CAIX), vascular endothelial growth factor (vascular endothelial growth factor, VEGF), hypoxia-inducible factor (hypoxia-inducible factor, HIF), KI67, P53, P2L PTEN (phosphatase and tensin homolog), E-Cadherin, osteopontin and CD44, CXCR4 and other cell cycle and proliferation markers. None of these potential RCC biomarkers has significantly improved the predictive accuracy of current prognostic systems, most have not been validated on a large scale, and the use of the aforementioned markers is not recommended in routine clinical practice. So far, no highly effective biomarkers for early diagnosis of RCC have been identified, resulting in poor late detection and treatment of the disease. Therefore, identification of RCC biomarkers that can improve early diagnosis and prognosis of RCC patients is an important focus of cancer therapy. miRNA is a short non-coding RNA with a length of 18-25 nucleotides, which can prevent protein expression by decomposing specific target mRNA or inhibiting its translation, and participate in the regulation of individual development, cell apoptosis, proliferation and differentiation and other life activities. In the occurrence and development of tumors, they play a role similar to oncogenes or tumor suppressor genes. The expression profile of miRNA has obvious tissue specificity, and has specific expression patterns in different tumors. These characteristics make miRNAs likely to become new biological markers and therapeutic targets for tumor diagnosis. Although many studies have evaluated miRNA expression in RCC patient tissue and serum, the urinary miRNA biomarkers and biomarker combination markers that can be used for kidney cancer screening have not yet been determined. For example: Patent US10457994B2 discloses a A combination of miRNA markers that can predict the metastasis and prognosis of clear cell renal cell carcinoma, miR-10b, miR-139-5p, miR-130b and miR-199b-5p; miR-199b-5p and miR-130b are in the metastasis miR-10b and miR-139-5p were downregulated in metastatic RCC. The literature microRNA-210-3p depletion by CRISPR/Cas9 promoted tumorigenesis through revival of TWIST 1 in renal cell carcinoma ( Hirofumi Yoshino, et. Oncotarget, 2017,8(13):20881-20894.) discloses that in clear cell renal cell carcinoma The five miRNA markers that were up-regulated in the CD were: miR-885-5p> miR-1274, miR-210-3p, miR-224 and miR-1290. In summary, in view of the fact that there is no clear conclusion in the prior art, which single miRNA marker or miRNA marker Combination of biomarkers can be used to accurately and effectively predict or diagnose renal cell carcinoma, and the sample collection route of miRNA markers is from urine, plasma, or tissue. There are different methods and no conclusions; therefore, those skilled in the art urgently need A urine miRNA marker combination suitable for the diagnosis of kidney cancer and having high population specificity was developed. SUMMARY OF THE INVENTION The technical problem to be solved by the present invention is to provide a urinary miRNA marker, diagnostic reagent and kit for kidney cancer diagnosis, which has higher population specificity than other miRNA markers reported internationally; The disclosed miRNA diagnostic markers and their combinations are proposed for the first time, which are more reliable than other miRNA molecular markers, and provide a new alternative way for the diagnosis of kidney cancer. In order to solve the above technical problems, the technical solution provided by the present invention is as follows: The present invention provides a urine miRNA marker for kidney cancer diagnosis, which is selected from any one or more of the following 8 miRNAs: hsa-miR-671 -3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-4306>hsa -miR-1-3p o In some embodiments, the urine miRNA marker can be selected from any one or more of the following 7 miRNAs: hsa-miR-671-3p^hsa-miR-518e- 5p^hsa-miR-153-3p>hsa-miR-21-3p^hsa-miR-331-5p^hsa-miR-885-5p>hsa-miR-1-3p o In some embodiments, the The urine miRNA markers can be selected from any one or more of the following 7 miRNAs: hsa-miR-671-3px hsa-miR-518e-5p^ hsa-miR-153-3p> hsa-miR-21- 3p^hsa-miR-331-5p^hsa-miR-885-5p>hsa-miR-4306o In some embodiments, the urine miRNA marker can be selected from any one or more of the following 6 miRNAs One: hsa-miR-671-3p, hsa-miR-518e-5p > hsa-miR-153-3p, hsa-miR-21-3p^ hsa-miR-331-5p > hsa-miR-885-5p 0 In the present invention, the above is selected from hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR- At least 2 of the 6 miRNAs 885-5p constitute urine miRNA markers whose AUC value is higher than that of a single miRNA (such as hsa-miR-518e-5p or hsa-miR13p), including but not limited to the following The combination can be used as a preferred embodiment:
1 ) 优选的, 尿液 miRNA标志物可以选自如下 5个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-885-5p0 hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p0 hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p、 hsa-miR-885-5p0 hsa-miR-518e-5p > hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p0 1) Preferably, the urine miRNA marker can be selected from at least 2 of the following 5 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR -21-3p> hsa-miR-331-5p o hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-885 -5p 0 hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-331-5p>hsa-miR-885-5p o hsa-miR-671-3p > hsa-miR-518e-5p, hsa-miR-21-3p > hsa-miR-331-5p > hsa-miR-885-5p 0 hsa-miR-671-3p > hsa-miR-153-3p > hsa -miR-21-3p>hsa-miR-331-5p, hsa-miR-885-5p 0 hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR -331-5p> hsa-miR-885-5p 0
2) 优选的, 尿液 miRNA标志物可以选自如下 4个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p、 hsa- hsa-miR-21-3po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa- hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa- hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa- hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-
Figure imgf000004_0001
hsa-miR-885-5p o 说 明 书 hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-885-5p0 hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p0 hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-885-5po hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p^ hsa-miR-885-5po
2) Preferably, the urine miRNA marker can be selected from at least 2 of the following 4 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-21-3p o hsa -miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-331-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-885-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-hsa-miR-331-5p o hsa-miR-671-3p>hsa-miR-518e-5p, hsa-
Figure imgf000004_0001
hsa-miR-885-5p o Instructions hsa-miR-671-3p > hsa-miR-518e-5p > hsa-miR-331-5p > hsa-miR-885-5p o hsa-miR-671-3p > hsa-miR-153-3p > hsa -miR-21-3p > hsa-miR-331-5p o hsa-miR-671-3p > hsa-miR-153-3p > hsa-miR-21-3p > hsa-miR-885-5p 0 hsa-miR -671-3p>hsa-miR-153-3p>hsa-miR-331-5p>hsa-miR-885-5p o hsa-miR-671-3p>hsa-miR-21-3p>hsa-miR-331 -5p> hsa-miR-885-5p 0 hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p> hsa-miR-331-5p o hsa-miR-518e-5p , hsa-miR-153-3p > hsa-miR-21-3p > hsa-miR-885-5p o hsa-miR-518e-5p, hsa-miR-153-3p > hsa-miR-331-5p > hsa -miR-885-5p o hsa-miR-518e-5p, hsa-miR-21-3p > hsa-miR-331-5p > hsa-miR-885-5p o hsa-miR-153-3p > hsa-miR -21-3p> hsa-miR-331-5p^ hsa-miR-885-5p o
3) 优选的, 尿液 miRNA标志物可以选自如下 3个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3po hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-885-5po hsa-miR-671-3p> hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-671-3p> hsa-miR-21-3p> hsa-miR-885-5po hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3po hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-331-5po hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-885-5po hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-518e-5p、 hsa-miR-21-3p^ hsa-miR-885-5po hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-885-5po hsa-miR-518e-5p > hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-153-3p> hsa-miR-331-5p> hsa-miR-885-5po hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5po 3) Preferably, the urine miRNA marker can be selected from at least 2 of the following 3 miRNAs: hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-153-3p o hsa-miR -671-3p> hsa-miR-518e-5p, hsa-miR-21-3p o hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-331-5p o hsa-miR-671 -3p> hsa-miR-518e-5p, hsa-miR-885-5p o hsa-miR-671-3p>hsa-miR-153-3p> hsa-miR-21-3p o hsa-miR-671-3p >hsa-miR-153-3p> hsa-miR-331-5p o hsa-miR-671-3p>hsa-miR-153-3p> hsa-miR-885-5p o hsa-miR-671-3p> hsa -miR-21-3p > hsa-miR-331-5p o hsa-miR-671-3p > hsa-miR-21-3p > hsa-miR-885-5p o hsa-miR-518e-5p, hsa-miR -153-3p>hsa-miR-21-3p o hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-331-5p o hsa-miR-518e-5p, hsa-miR-153 -3p>hsa-miR-885-5p o hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p o hsa-miR-518e-5p, hsa-miR-21-3p ^ hsa-miR-885-5p o hsa-miR-153-3p > hsa-miR-21-3p > hsa-miR-331-5p o hsa-miR-153-3p > hsa-miR-21-3p > hsa -miR-885-5p o hsa-miR-518e-5p > hsa-miR-331-5p > hsa-miR-885-5p o hsa-miR-153-3p > hsa-miR-331-5p > hsa-miR -885-5p o hsa-miR-21-3p > hsa-miR-331-5p > hsa-miR-885-5p o
4) 优选的, 尿液 miRNA标志物可以选自如下 2个 miRNA: hsa-miR-671-3p> hsa-miR-518e-5p。 hsa-miR-671-3p> hsa-miR-153-3po hsa-miR-671-3p> hsa-miR-21-3po hsa-miR-671-3p> hsa-miR-885-5po hsa-miR-518e-5p > hsa-miR-21-3po hsa-miR-518e-5p > hsa-miR-331-5p0 hsa-miR-518e-5p > hsa-miR-885-5p0 hsa-miR-153-3p> hsa-miR-21-3po 说 明 书 hsa-miR-153-3p> hsa-miR-331-5po hsa-miR-21-3p> hsa-miR-331-5po hsa-miR-21-3p> hsa-miR-885-5po 4) Preferably, the urine miRNA marker can be selected from the following two miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p. hsa-miR-671-3p> hsa-miR-153-3p o hsa-miR-671-3p> hsa-miR-21-3p o hsa-miR-671-3p> hsa-miR-885-5p o hsa- miR-518e-5p > hsa-miR-21-3p o hsa-miR-518e-5p > hsa-miR-331-5p 0 hsa-miR-518e-5p > hsa-miR-885-5p 0 hsa-miR- 153-3p> hsa-miR-21-3p o Instructions hsa-miR-153-3p> hsa-miR-331-5p o hsa-miR-21-3p> hsa-miR-331-5p o hsa-miR-21-3p> hsa-miR-885-5p o
5) 优选的, 尿液 miRNA标志物可以选自如下 1个 miRNA: hsa-miR hsa-miR 在一些
Figure imgf000006_0001
特点在于: 当尿液 miRNA标志物可以选自 hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p^ hsa-miR-4306^ hsa-miR-l-3p这 8个 miRNA 中的至少 2个时, 或 当尿液 miRNA标志物可以选自 hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306这 7个 miRNA中的至少 2 个时, 或 当尿液 miRNA标志物可以选自 hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p^ hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p这 7个 miRNA中的至少 2 个时, 或 当尿液 miRNA标志物可以选自 hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p^ hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p这 6个 miRNA中的至少 2个时, 其中有 1个 miRNA必须是 hsa-miR-518e-5p □ 在一些优选的实施方案中, 本发明还提供了含有特定 miRNA的尿液 miRNA标志物, 其 特点在于: 当尿液 miRNA标志物可以选自 hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p^ hsa-miR-4306 > hsa-miR-l-3p这 8个 miRNA 中的至少 2个时, 或 当尿液 miRNA标志物可以选自 hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p^ hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p这 7个 miRNA中的至少 2 个时, 或 其中有 1个 miRNA必须是 hsa-miR-l-3p0 本发明中, 上述选自 hsa-miR-671-3p> hsa-miR-518e-5p hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306、 hsa-miR-l-3p这 8个 miRNA中的至少 2个, 且含有特定 miRNA (如 hsa-miR-518e-5p或 hsa-miR-l-3p)? 所构成的尿液 miRNA标志物, 其 AUC值不低于 0.681的, 包括但不限于如下的组合, 均可作为优选的实施方案:
5) Preferably, the urine miRNA marker can be selected from the following 1 miRNA: hsa-miR hsa-miR in some
Figure imgf000006_0001
The characteristics are: when the urine miRNA marker can be selected from hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331- 5p> hsa-miR-885-5p^ hsa-miR-4306^ hsa-miR-1-3p When at least 2 of these 8 miRNAs, or when the urine miRNA marker can be selected from hsa-miR-671- 3p^ hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p > hsa-miR-331-5p > hsa-miR-885-5p > hsa-miR-4306 these 7 miRNAs When at least 2 of them, or when the urine miRNA markers can be selected from hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p^ hsa-miR-21-3p> hsa- miR-331-5p>hsa-miR-885-5p>hsa-miR-1-3p at least 2 of these 7 miRNAs, or when the urine miRNA markers can be selected from hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p^hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p At least 2 of these 6 miRNAs, wherein One miRNA must be hsa-miR-518e-5p □ In some preferred embodiments, the present invention also provides a urine miRNA marker containing a specific miRNA, which is characterized in that: When the urine miRNA marker can be selected from hsa-miR-671-3p^ hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p^hsa-miR -4306>hsa-miR-1-3p when at least 2 of these 8 miRNAs, or when the urine miRNA markers can be selected from hsa-miR-671-3p^hsa-miR-518e-5p hsa-miR- 153-3p^ hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-l-3p at least 2 of these 7 miRNAs, or one of them Each miRNA must be hsa-miR- 1-3p . In the present invention, the above is selected from hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-4306, hsa-miR-l-3p at least 2 of the 8 miRNAs, and contain specific miRNAs (such as hsa-miR-518e -5p or hsa-miR-1-3p) ? Urinary miRNA markers, whose AUC value is not less than 0.681, including but not limited to the following combinations, can be used as a preferred embodiment:
1 ) 优选的, 尿液 miRNA标志物可以选自如下 8个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p hsa-miR-153-3p> hsa-miR-21-3p^ hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306^ hsa-miR-l-3p0 1) Preferably, the urine miRNA marker can be selected from at least 2 of the following 8 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p>hsa-miR- 21-3p^hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR-4306^hsa-miR-l- 3p0
2) 优选的, 尿液 miRNA标志物可以选自如下 7个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p> hsa-miR-4306; 说 明 书 hsa-miR-671-3p> hsa-miR-518e-5p hsa-miR-153-3p、 hsa-miR-21-3p ^ hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-l-3p; hsa-miR-518e-5p hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p ^ hsa-miR-885-5p^ hsa-miR-4306、 hsa-miR-l-3p; 2) Preferably, the urine miRNA marker can be selected from at least 2 of the following 7 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p^hsa-miR- 21-3p^hsa-miR-331-5p^hsa-miR-885-5p>hsa-miR-4306; Instructions hsa-miR-671-3p>hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p^hsa-miR-331-5p, hsa-miR-885-5p>hsa- miR-1-3p; hsa-miR-518e-5p hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p^hsa-miR-885-5p^hsa-miR-4306 , hsa-miR-l-3p;
3) 优选的, 尿液 miRNA标志物可以选自如下 6个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p^ hsa-miR-21-3p ^ hsa-miR-331-5p、 hsa-miR-4306; hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p^ hsa-miR-21-3p > hsa-miR-331-5p^ hsa-miR-l-3p; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p^ hsa-miR-21-3p ^ hsa-miR-331-5p^ hsa-miR-885-5p; hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-4306、 hsa-miR-l-3p; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-4306; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-4306、 hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-4306; hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-885-5p、 hsa-miR-4306、 hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-4306、 hsa-miR-l-3p; 3) Preferably, the urine miRNA marker can be selected from at least 2 of the following 6 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p^hsa-miR -21-3p^hsa-miR-331-5p, hsa-miR-4306; hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p^hsa-miR-21-3p >hsa-miR-331-5p^hsa-miR-l-3p; hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p^hsa-miR-21-3p^hsa -miR-331-5p hsa-miR-885-5p; hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR -4306, hsa-miR-l-3p; hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p , hsa-miR-4306; hsa-miR-671-3p> hsa-miR-518e-5p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR -l-3p; hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-4306, hsa-miR-l-3p ; hsa-miR-518e-5p, hsa-miR-153-3p > hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306; hsa-miR -518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-l-3p; hsa-miR-518e-5p , hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-l-3p; hsa-miR-518e-5p, hsa - miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-1-3p;
4) 优选的, 尿液 miRNA标志物可以选自如下 5个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-885-5p; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p^ hsa-miR-l-3p; hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p^ hsa-miR-4306; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306 hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p; 说 明 书 4) Preferably, the urine miRNA marker can be selected from at least 2 of the following 5 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR -21-3p>hsa-miR-331-5p;hsa-miR-671-3p>hsa-miR-518e-5p,hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-885-5p;hsa-miR-671-3p>hsa-miR-518e-5p,hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306;hsa-miR-671-3p>hsa -miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p^hsa-miR-l-3p;hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR -21-3p^hsa-miR-331-5p^hsa-miR-885-5p; hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331 -5p^hsa-miR-4306; hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-l-3p; hsa -miR-518e-5p, hsa-miR-153-3p> hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-885-5p; hsa-miR-518e-5p, hsa-miR -21-3p>hsa-miR-331-5p> hsa-miR-4306 hsa-miR-l-3p; hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR-4306; hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR- l-3p; manual
5) 优选的, 尿液 miRNA标志物可以选自如下 4个 miRNA中的至少 2个: hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-21-3p> hsa-miR-331-5p; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p; hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-885-5p; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-l-3p; hsa-miR-518e-5p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p; 5) Preferably, the urine miRNA marker can be selected from at least 2 of the following 4 miRNAs: hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21-3p>hsa-miR -331-5p; hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p; hsa-miR-518e-5p, hsa-miR-153 -3p>hsa-miR-21-3p>hsa-miR-885-5p; hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306; hsa -miR-518e-5p, hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-l-3p; hsa-miR-518e-5p, hsa-miR-21-3p>hsa-miR -331-5p>hsa-miR-885-5p;
6) 优选的, 尿液 miRNA标志物可以选自如下 3个 miRNA中的至少 2个: hsa-miR-518e-5p > hsa-miR-21-3p> hsa-miR-331-5p; 以下几种由 3~8个 miRNA组成、 AUC值 30.681的尿液 miRNA标志物, 其共性特点在 于, 均至少包括 hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p: 在一些优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 8个 miRNA组成: hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-4306^ hsa-miR-l-3p0 在一些优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 7个 miRNA组成: hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-4306 o 在一些优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 7个 miRNA组成: hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-l-3po 在一些优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 6个 miRNA组成: hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5po 在一些更优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 6个 miRNA组成: hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-331-5p0 在一些更优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 4个 miRNA组成: hsa-miR-518e-5p > hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-l-3p0 在一些更优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 4个 miRNA组成: hsa-miR-518e-5p > hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5po 在一些更优选的实施方案中, 所述的尿液 miRNA标志物可以由如下 3个 miRNA组成: hsa-miR-518e-5p > hsa-miR-21-3p> hsa-miR-331-5po 此外, 本发明还提供了一种肾癌诊断试剂, 包括特异性检测如前所述的一个或多个尿液 miRNA 标志物的试剂。 此外, 本发明还提供了一种肾癌诊断用试剂盒, 包括以如前所述的一个或多个尿液 miRNA 标志物作为标准品, 以及检测如前所述的各种尿液 miRNA标志物的相应引物。 此外, 本发明还提供了一种如前所述的各种尿液 miRNA标志物的应用, 主要用于制备 早期诊断和 /或复发监测的产品。 所述产品包括但不限于装置(如寡核昔酸探针或其集成、 芯片基片或检测基板上的高通 量 miRNA检测芯片、 以及微流控检测芯片)、 试剂盒和设备。 说 明 书 在一些优选的实施方案中, 所制备的用于早期诊断和 /或复发监测的产品, 包括如下一种 或几种的功能: 6) Preferably, the urine miRNA marker can be selected from at least 2 of the following 3 miRNAs: hsa-miR-518e-5p > hsa-miR-21-3p >hsa-miR-331-5p; the following types Urine miRNA markers consisting of 3 to 8 miRNAs with an AUC value of 30.681 have a common feature that they all include at least hsa-miR-518e-5p, hsa-miR-21-3p, and hsa-miR-331-5p: In some preferred embodiments, the urine miRNA marker may be composed of the following 8 miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa- miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p > hsa-miR-4306 > hsa-miR- 1-3p. In some preferred embodiments, the urine miRNA The marker can be composed of the following seven miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-4306 o In some preferred embodiments, the urine miRNA marker may be composed of the following seven miRNAs: hsa-miR-671-3p, hsa-miR- 518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-1-3p o In some preferred embodiments Among them, the urine miRNA marker can be composed of the following 6 miRNAs: hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p o In some more preferred embodiments, the urine miRNA markers may be composed of the following six miRNAs: hsa-miR-671-3p>hsa -miR-518e-5p > hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-331-5p 0 In some more preferred embodiments, the urine miRNA marker can be obtained by The following 4 miRNAs consist of: hsa-miR-518e-5p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR- 1-3p . In some more preferred embodiments, the Urine miRNA markers may consist of the following 4 miRNAs: hsa-miR-518e-5p > hsa-miR-153-3p > hsa-miR-21-3p > hsa-miR-331-5p o In some more preferred In an embodiment, the urine miRNA marker may be composed of the following three miRNAs: hsa-miR-518e-5p > hsa-miR-21-3p > hsa-miR-331-5p o In addition, the present invention also provides A diagnostic reagent for kidney cancer is provided, including a reagent for specifically detecting one or more urinary miRNA markers as described above. In addition, the present invention also provides a diagnostic kit for kidney cancer, including using one or more urinary miRNA markers as described above as a standard, and detecting various urinary miRNA markers as described above corresponding primers. In addition, the present invention also provides an application of various urinary miRNA markers as mentioned above, mainly for the preparation of products for early diagnosis and/or recurrence monitoring. The products include but are not limited to devices (such as oligonucleotide probes or their integration, chip substrates or high-throughput miRNA detection chips on detection substrates, and microfluidic detection chips), kits and equipment. Instructions In some preferred embodiments, the prepared product for early diagnosis and/or recurrence monitoring includes one or more of the following functions:
1) 鉴定或辅助鉴定肾癌; 1) Identification or auxiliary identification of renal cell carcinoma;
2) 诊断或辅助诊断初发肾癌; 2) Diagnosis or auxiliary diagnosis of primary renal cancer;
3) 诊断或辅助诊断复发肾癌。 此外, 本发明还提供了一种采用如前所述的一个或多个尿液 miRNA标志物来早期诊断 和 /或复发监测肾癌的方法, 包括如下步骤: 步骤 1 , 检测从受试者获得的尿液样品中 miRNA的存在; 步骤 2, 测量尿液样品中 miRNA标志物中的至少 1种 miRNA的表达水平; 步骤 3, 使用基于先前所测量的 miRNA表达水平的分数与参照比较, 通过比较受试者样 本与参照样本是否存在显著性差异, 来早期诊断和 /或复发监测受试者患有肾癌的可能性。 本文还提供了一种确定受试者是否患有肾癌或确定受试者患肾癌的风险的方法, 所述方 法包括检测从所述受试者获得的尿液样品中的至少一种 miRNA的表达水平, 其 中至少一种 miRNA 选自 hsa-miR-671-3p , hsa-miR-518e-5p , hsa-miR-153-3p , hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-l-3p; 和其中与对 照相比, miRNA的差异表达水平指示受试者患有肾癌或有患肾癌的风险。 在一些实施方案中,如所述的方法,所述的至少一种 miRNA包括如前所述的尿液 miRNA 标志物的组合。 在一些实施方案中, 其中与对照相比, miRNA的表达水平在患有肾癌或有患肾癌风险的 受试者中上调或下调。 在一些实施方案中, 所述的对照选自无癌症受试者、 无肾癌受试者、 未患肾癌或没有患肾癌风险的受试者。 在一些实施方案中, 本文提供的方法还包括执行临床程序和/或测量生物样品 (即尿液、 组织血、 血浆、 血清样品) 中的额外生物标志物。 其他生物标志物可包括但不限于碳酸酹酶 IX (carbonic anhydrase IX, C AIX) , 血管内皮生长因子 (vascular endothelial growth factor, VEGF) ,缺氧诱导因子(hypoxia- inducible factor, HIF), KI67, P53, P21 , PTEN(phosphatase and tensin homolog, 磷酸酶和硫素同源物), E-Cadherin, 骨桥蛋白和 CD44, CXCR4和其他 细胞周期和增殖标记物。 临床程序可能包括活检、 细针穿刺和诊断成像测试, 包括但不限于 超声、 计算机断层扫描 (CT)、 磁共振成像(MRI) 或正电子发射断层扫描 (PET) 成像。 在一些实施方案中, 本公开提供了使用本文公开的方法治疗被确定患有肾癌的受试者的 方法。 被确定患有肾癌的受试者将被转介给执业医师, 并且在确定合适的情况下, 用合适的 抗癌化合物、 手术、 靶向疗法、 免疫疗法或放射疗法或这些疗法的组合进行治疗。 与现有技术相比, 本发明的有益效果如下: 3) Diagnosis or auxiliary diagnosis of recurrent renal cell carcinoma. In addition, the present invention also provides a method for early diagnosis and/or recurrence monitoring of kidney cancer using one or more urine miRNA markers as described above, including the following steps: Step 1, detecting the the presence of miRNA in the urine sample; step 2, measuring the expression level of at least one miRNA in the miRNA markers in the urine sample; step 3, using the score based on the previously measured miRNA expression level to compare with the reference, by comparing Whether there is a significant difference between the subject sample and the reference sample is used for early diagnosis and/or recurrence monitoring of the possibility of the subject suffering from kidney cancer. Also provided herein is a method of determining whether a subject has kidney cancer or determining the risk of kidney cancer in a subject, the method comprising detecting at least one miRNA in a urine sample obtained from the subject The expression level of wherein at least one miRNA is selected from hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p , hsa-miR-885-5p, hsa-miR-4306, hsa-miR-l-3p; and wherein compared with the control, the differential expression level of miRNA indicates that the subject has kidney cancer or is at risk of suffering from kidney cancer . In some embodiments, as described in the method, the at least one miRNA comprises a combination of urinary miRNA markers as previously described. In some embodiments, wherein the expression level of the miRNA is up-regulated or down-regulated in a subject with or at risk of developing kidney cancer compared to a control. In some embodiments, the control is selected from subjects without cancer, subjects without kidney cancer, subjects without kidney cancer or subjects without risk of kidney cancer. In some embodiments, the methods provided herein also include performing clinical procedures and/or measuring additional biomarkers in biological samples (ie, urine, tissue blood, plasma, serum samples). Other biomarkers may include but are not limited to carbonic anhydrase IX (CAIX), vascular endothelial growth factor (vascular endothelial growth factor, VEGF), hypoxia-inducible factor (hypoxia-inducible factor, HIF), KI67, P53, P21 , PTEN (phosphatase and tensin homolog, phosphatase and thionin homolog), E-Cadherin, osteopontin and CD44, CXCR4 and other cell cycle and proliferation markers. Clinical procedures may include biopsy, fine needle aspiration, and diagnostic imaging tests including, but not limited to, ultrasound, computed tomography (CT), magnetic resonance imaging (MRI), or positron emission tomography (PET) imaging. In some embodiments, the present disclosure provides methods of treating a subject determined to have kidney cancer using the methods disclosed herein. Subjects determined to have kidney cancer will be referred to a licensed physician and, where determined appropriate, treated with an appropriate anticancer compound, surgery, targeted therapy, immunotherapy, or radiation therapy, or a combination of these treat. Compared with the prior art, the beneficial effects of the present invention are as follows:
1、 本发明首次发现了多个可检测肾癌的 miRNA, 如 hsa-miR-518e-5p或 hsa-miR-l-3p, 现有文献或专利均未报道过可用于检测肾癌。 1. The present invention discovers for the first time multiple miRNAs that can detect kidney cancer, such as hsa-miR-518e-5p or hsa-miR-1-3p, which have not been reported in existing literature or patents and can be used to detect kidney cancer.
2、 本发明从癌症和健康对照受试者的尿液样本中, 初步找到可用于检测肾癌的 16 个 miRNA 标志物,经进一步研究后创造性的发现: 当尿液 miRNA标志物选自如下 8个 miRNA 中的一个或多个时, 可显著性差异的检测肾癌 (p<0.05): hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p>hsa-miR-21-3pAhsa-miR-331-5p^hsa-miR-885-5p>hsa-miR-4306>hsa-miR-l-3po2. The present invention initially finds 16 miRNA markers that can be used to detect kidney cancer from the urine samples of cancer and healthy control subjects. After further research, it is creatively discovered: When the urine miRNA markers are selected from the following 8 When one or more of these miRNAs were detected, kidney cancer could be significantly differently detected (p<0.05): hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa- miR-21-3pAhsa-miR-331-5p^hsa-miR-885-5p>hsa-miR-4306>hsa-miR-l-3po
3、 本发明还意外发现: 只要选自 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p^ 说 明 书 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p这 6个 miRNA中的至少 2个, 所构成的尿 液 miRNA标志物, 其 AUC值就会高于单个 miRNA (如 hsa-miR-518e-5p等) 的 AUC值; 但是,当尿液 miRNA标志物由 hsa-miR-518e-5p和 hsa-miR-153-3p组成,其 AUC值为 0.561, 反而低于单个 hsa-miR-518e-5p的 AUC值。 3. The present invention also unexpectedly finds that: as long as it is selected from hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p^ Instructions hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p at least 2 of the 6 miRNAs, the urinary miRNA markers, the AUC value will be higher than The AUC value of a single miRNA (such as hsa-miR-518e-5p, etc.); however, when the urine miRNA marker is composed of hsa-miR-518e-5p and hsa-miR-153-3p, its AUC value is 0.561, instead Lower than the AUC value of single hsa-miR-518e-5p.
4、在由 8个 miRNA(hsa-miR-671-3p、 hsa-miR-518e-5p > hsa-miR-153-3p、 hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306和 hsa-miR-l-3p)组成的尿液 miRNA标志物 AUC=0.681的研究基础上, 本发明通过优化、 筛选, 意外找到了 AUCN0.681的尿液 miRNA 标志物, 其共性特点在于: 所述尿液 miRNA标志物选自 hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306、 hsa-miR-l-3p 这 8个 miRNA中的至少 2个,且必须含有 1个特定 miRNA( hsa-miR-518e-5p或 hsa-miR-l-3p), 尤其是 hsa-miR-518e-5p起到上调的作用。 因此,本发明尝试将 hsa-miR-671-3p、 hsa-miR-518e-5p> hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p> hsa-miR-885-5p作为新的肾癌标志物组合, 并以此进行临床样本的收集与验 证考察, 结果表明该标志物组合在肾癌的早期检测和诊断中有着重要的价值。 总之, 本发明提供了多种组合的尿液 miRNA标志物, 其检测操作简便, 可行性强, 灵 敏度和特异性高, 具有临床诊断和指导意义; 而且, 本发明可通过尿液检测 miRNA表达量, 从而达到无创的目的。 附图说明 图 1为 8个(P<0.05) 有差异表达的肾癌 miRNA诊断标志物的表达水平热图。 miRNA的表 达水平(拷贝数 /毫升)是以 log2标度呈现的并且相对于零平均值标准化。 点的颜色表示浓度。 基于欧几里德距离针对两个维度 (miRNA和样品) 进行分层聚类。 对于水平维度, 使用颜色 表示病例-对照的受试者。 图 2为肾癌 miRNA诊断标志物组合在各队列的 AUC图; 其中, 图 2 -A为 8个肾癌 miRNA诊 断标志物组合在各队列的 AUC图, 图 2-B为 6个肾癌 miRNA诊断标志物组合在各队列的 AUC 图。 图 3为 6个肾癌 miRNA诊断标志物组合在对照和癌症预测值的线箱图。 具体实施方式 下面通过具体实施例, 对本发明的技术方案作进一步的具体说明。 本发明中, 若非特指, 所采用的原料和设备等均可从市场购得或是本领域常用的。 下述 实施例中的方法, 如无特别说明, 均为本领域的常规方法。 术语定义 术语 “miRNA”指的是微小 RNA, 即小的非编码 RNA分子, 它们在一些实施例中含有 约 22个核昔酸, 并且存在于植物、 动物以及一些病毒中。 已知 miRNA在 RNA沉默和基因 表达的转录后调节中具有功能。 这些高度保守的 RNA通过与特异性 mRNA的 3,-非翻译区 (3'-UTR) 结合来调节基因的表达。 举例来说, 每一种 miRNA被认为调节多种基因, 并且 由于数百种 miRNA基因被预测存在于高等真核生物中。 miRNA倾向于从基因组中的几个不 同的基因座转录。 这些基因编码具有发夹结构的长 RNA, 这些长 RNA在由一系列 RNA酶 说 明 书 4. Among 8 miRNAs (hsa-miR-671-3p, hsa-miR-518e-5p > hsa-miR-153-3p, hsa-miR-21-3p > hsa-miR-331-5p > hsa- miR-885-5p>hsa-miR-4306 and hsa-miR-l-3p) based on the research of urine miRNA marker AUC=0.681, the present invention accidentally found a urine miRNA marker with AUCN0.681 through optimization and screening Liquid miRNA markers, the common features of which are: the urine miRNA markers are selected from hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p >hsa-miR-331-5p>hsa-miR-885-5p> hsa-miR-4306, hsa-miR-l-3p at least 2 of these 8 miRNAs, and must contain 1 specific miRNA (hsa- miR-518e-5p or hsa-miR-l-3p), especially hsa-miR-518e-5p plays an up-regulation role. Therefore, the present invention tries to hsa-miR-671-3p, hsa-miR-518e-5p>hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p>hsa-miR- 885-5p is used as a new combination of kidney cancer markers, and the collection and verification of clinical samples are carried out. The results show that the combination of markers has important value in the early detection and diagnosis of kidney cancer. In conclusion, the present invention provides various combinations of urinary miRNA markers, which are easy to operate, highly feasible, high in sensitivity and specificity, and have clinical diagnostic and guiding significance; moreover, the present invention can detect miRNA expression through urine , so as to achieve the purpose of non-invasive. BRIEF DESCRIPTION OF THE DRAWINGS Figure 1 is a heat map of the expression levels of 8 (P<0.05) differentially expressed renal cancer miRNA diagnostic markers. miRNA expression levels (copy number/ml) are presented on a log2 scale and normalized to the zero mean. The color of the dots indicates the concentration. Hierarchical clustering was performed for two dimensions (miRNA and sample) based on Euclidean distance. For the horizontal dimension, color is used to represent case-control subjects. Figure 2 is the AUC chart of renal cancer miRNA diagnostic marker combinations in each cohort; among them, Figure 2-A is the AUC chart of 8 renal cancer miRNA diagnostic marker combinations in each cohort, and Figure 2-B is 6 renal cancer miRNAs AUC plots of diagnostic marker combinations in each cohort. Figure 3 is a line box plot of the control and cancer predictive values of the six kidney cancer miRNA diagnostic marker combinations. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS The technical solution of the present invention will be further specifically described through specific examples below. In the present invention, unless otherwise specified, the raw materials and equipment used can be purchased from the market or commonly used in the field. The methods in the following examples, unless otherwise specified, are conventional methods in the art. Definitions of Terms The term "miRNA" refers to microRNAs, ie small non-coding RNA molecules, which contain about 22 nucleotides in some embodiments, and exist in plants, animals and some viruses. miRNAs are known to have functions in RNA silencing and post-transcriptional regulation of gene expression. These highly conserved RNAs regulate gene expression by binding to the 3'-untranslated region (3'-UTR) of specific mRNAs. For example, each miRNA is thought to regulate multiple genes, and since hundreds of miRNA genes are predicted to exist in higher eukaryotes. miRNAs tend to be transcribed from several different loci in the genome. These genes encode long RNAs with hairpin structures, which are processed by a series of RNases manual
III酶(包括 Drosha和 Dicer)加工时形成在 3,末端上具有 2个核昔酸突出端的通常约 22核昔 酸长的 miRNA双链体。 术语 “调节 "指的是细胞响应于外部变量增加或减少细胞组分如 RNA或蛋白质的量的 过程。 细胞组分的增加被称作上调, 而细胞组分的减少被称作下调。 本发明使用的术语 “失 调” 或 “错调”意指上调或下调。 下调的实例是细胞中诸如激素或神经递质的分子的受体数 目减少, 这会降低细胞对所述分子的敏感性。 这种现象是局部作用的负反馈机制的实例。 上 调的实例是当施用诸如二氧杂环己烯的异型生物质分子时肝细胞中细胞色素 P450酶的数量 增加, 从而引起这些分子的更大降解。 上调和下调也可以作为对毒素或激素的响应而发生。 妊娠中上调的实例是引起子宫中的细胞变得对催产素更敏感的激素。 术语 “差异表达”指的是测量细胞组分以与对照或另一个样品相比较, 从而确定所述细 胞组分的例如浓度、 存在或强度的差异。 这样的比较的结果可以绝对值给出, 即组分存在于 样品中而不存在于对照中; 或以相对值给出, 即组分的表达或浓度与对照相比增加或减少。 在这种情况下, 术语 “增加”与术语 “上调”的意思相同可互换, 术语 “减少”与术语 “下 调” 的意思相同可互换。 术语 “miRNA组合“涉及本发明的 miRNA的组合。 miRNA的量可以通过本领域公知的技 术在对象的样品中确定。 根据样品的性质, 所述量可以通过用于量化多核昔酸量的基于 PCR 的技术或者通过其他方法 (如质谱或测序等) 来确定。 术语 “探针”是指通常用于检测与探针的序列互补的靶 RNA和 /或 RNA序列的单链寡核 昔酸。 探针与核昔酸序列由于探针与靶序列之间的互补性而允许核昔酸配对的单链核酸III enzymes (including Drosha and Dicer) form miRNA duplexes, typically about 22 nucleotides long, with a 2 nucleotide overhang on the 3' terminus when processed. The term "regulation" refers to the process by which a cell increases or decreases the amount of a cellular component such as RNA or protein in response to an external variable. An increase in a cellular component is referred to as upregulation, while a decrease in a cellular component is referred to as downregulation. The term "dysregulation" or "dysregulation" as used herein means up-regulation or down-regulation. An example of downregulation is a reduction in the number of receptors in a cell for a molecule such as a hormone or neurotransmitter, which reduces the sensitivity of the cell to that molecule. This phenomenon is an example of a locally acting negative feedback mechanism. An example of upregulation is the increased number of cytochrome P450 enzymes in hepatocytes when xenobiotic molecules such as dioxins are administered, causing greater degradation of these molecules. Upregulation and downregulation can also occur in response to toxins or hormones. An example of upregulation in pregnancy is a hormone that causes cells in the uterus to become more sensitive to oxytocin. The term "differential expression" refers to the measurement of a cellular component in comparison to a control or another sample, thereby determining a difference in, for example, concentration, presence or intensity of said cellular component. The results of such comparisons may be given in absolute values, ie, the component is present in the sample but not in the control, or in relative values, ie, the expression or concentration of the component is increased or decreased compared to the control. In this case, the term "increase" is synonymous and interchangeable with the term "up-regulation", and the term "decrease" is synonymous and interchangeable with the term "down-regulation". The term "miRNA combination" relates to combinations of miRNAs of the invention. The amount of miRNA can be determined in a sample from a subject by techniques well known in the art. Depending on the nature of the sample, the amount can be determined by PCR-based techniques for quantifying the amount of polynucleotides or by other methods such as mass spectrometry or sequencing, among others. The term "probe" refers to a single-stranded oligonucleotide commonly used to detect target RNA and/or RNA sequences complementary to the sequence of the probe. probe and nucleotide sequence single-stranded nucleic acid that allows nucleotide pairing due to complementarity between the probe and target sequence
(DNA或 RNA)杂交。 探针的长度取决于预期用途以及所需的探针特异性。 通常, 探针的长 度为 20至 500个(即 50、 55、 60、 65、 70、 75、 80、 85、 90、 95、 100、 110、 120、 130、 140、 150、 160、 170、 180、 190、 200、 300、 400、 500个) 核昔酸, 优选 20至 100个, 更优选 20至 50个核昔酸。 对于微 RNA的检测, 探针为 12至 30个核昔酸。 探针用于多种实验设置, 例如但 不限于 Southern和 Northern印迹、 实时 PCR和原位杂交 ( In Situ Hybridization , ISH) 以及微阵 列实验。 探针可以是未经标记的、 经直接标记的或经间接标记的, 例如用链霉抗生物素蛋白 复合物随后可结合的生物素标记的。 所述标记可以是可通过光谱、 光化学、 生物化学、 免疫 化学、 化学或其他物理手段检测的分子。例如, 合适的标记包括 32P、 荧光染料、 电子致密试 剂、 酶(例如, 通常用于 ELISA)、 生物素、 地高辛配基(digoxigenin)、 或半抗原以及其他可 检测或可以变成可检测的实体。 标记可以引入核酸中的任何位置, 例如 3,端、 5,端或内部。 术语 “探针 ”还涵盖其骨架组成不同的核酸, 例如但不限于肽核酸 (PNA)、 锁核酸 (LNA)、 二醇核酸 (GNA) 和苏糖核酸(TNA)o 术语 “指标 ”和 "标志”在本发明中可互换使用, 并且是指病症的体征或信号或者用于 监测病症。 这样的 “病症”是指细胞、 组织或器官的生物状态, 或者是指个体的健康和 /或疾 病状态。 指标可以是包括但不限于肽、 蛋白质和核酸的分子的存在或不存在, 或者可以是细 胞、 或组织、 器官或个体中这样的分子的表达水平或模式变化。 指标可以是个体中疾病的发 生、 发展或存在或者这样的疾病的进一步进展的体征。 指标也可以是在个体中发生疾病的风 险的体征。 术语 “分数”指的是整数或数字, 它可以是以数学方式, 例如通过使用本领域已知的计 算模型 (可以包括但不限于 SMV作为一个实例) 来确定的, 并且是使用本领域已知的许多数 说 明 书 学方程式和 /或算法中的任一种来计算的以实现统计分类的目的。这样的分数用于列举可能结 果的范围上的一个结果。 这样的分数的相关性和统计显著性取决于用于建立结果范围的基础 数据集的大小和质量。 举例来说, 可以将盲样输入到算法中, 进而基于通过分析所述盲样所 提供的信息来计算分数。 这使得所述盲样的分数产生。 基于该分数, 可以作出决定, 例如产 生该盲样的患者患有癌症或没有癌症的可能性如何。 范围的端值可以基于所提供的数据在逻 辑上限定或根据实验人员的要求任意限定。 在这两种情况下, 所述范围需要在测试盲样之前 被限定。 术语 "表达水平”是指在特定的时间点体内或样品中存在的基因产物的量。 表达水平可 以例如通过由基因表达的蛋白质或 mRNA来测量 /量化 /检测。可以例如如下量化表达水平: 用 相同样品或参考样品 (例如, 在相同时间从同一个体得到的样品或相同样品的相同尺寸 (重 量、 体积) 的部分) 中相同类型基因产物的总量 (总蛋白质或 mRNA) 归一化样品中存在的 目的基因产物的量, 或者确定目的基因产物的量 /限定的样品尺寸 (重量、 体积等)。 可以通 过本领域已知的任何方法来测量或检测表达水平, 所述方法例如用于目的基因产物的直接检 测和量化的方法(例如质谱), 或者通常通过目的基因产物与对目的基因产物具有特异性的一 种或更多种不同分子或检测装置(例如, 引物、 探针、 抗体、 蛋白质支架) 结合而工作的用 于间接检测和测量目的基因产物的方法。 技术人员还已知的是确定基因拷贝的水平, 其还包 括确定一个或更多个片段的不存在或存在 (例如, 通过核酸探针或引物, 例如定量 PCR、 多 重连接依赖性探针扩增 PCR)o 针对肾癌检测方法包括以下步骤: a) 测定人类来源的被检测样本和参考样本中 hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p; b) 比较被检测样本中与参考样本中 hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p的表达水平;其中,被检测样本中上述 miRNA 的任一种的表达水平与参考样本中相应 miRNA的表达水平相比出现显著变化, 表明该个体可 能患有肾癌。 具体来讲,被检测肾癌中任意一种 miRNA的表达水平比参考样本中 miRNA的表达水平发 生显著变化时, 样本提供者可能患有肾癌。 在较佳的实施方案中, 被检测尿液样本中任意 8种 miRNA的表达水平比参考样本中 miRNA的表达水平发生显著变化时, 样本提供者可能患有肾癌。 在更佳的实施方案中, 被检测尿液样本中 6种 miRNA的表达水平比参考样本中 miRNA的 表达水平发生显著变化时, 样本提供者可能患有肾癌。 本发明中, 参考样本来自健康人源尿液样本。 另一方面, 本发明还提供了一种检测肾癌 microRNA的方法。 具体地说, 该方法包括逆转 录和实时荧光定量聚合酶链式反应 (RT-qPCR)。 更具体地, 在实时荧光定量聚合酶链式反应 中,使用的引物组合为 hsa-miR-671-3p) hsa-miR-518e-5p) hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-33 l-5p, hsa-miR-885-5p检测的逆转录引物和 PCR引物组合。 可以根据相关 miRNA的序列, 对本发明的引物序列做出适当调整和修改, 这些经过修改 的引物序列仍可以用于检测所述 miRNA标志物。 本发明也包括这些等同的技术方案。 本发明使用 RT-qPCR方法, 相较于基于数百个分子的芯片, 具备更可靠的临床可行性和 说 明 书 实用性, 而且成本低, 更易于推广。 另外, 对于上述 miRNA的检测方法, 不限于本发明提供 的 RT-qPCR法, 其他方法例如测序法, 微阵列, RNA印迹, 生物发光和探针法等也可用于检 测所述的 miRNA标志物。 申请人在研究中发现任意 1种可以用于诊断肾癌的 miRNA标志物组合, 任意 2种 -5种可以 用于诊断肾癌的 miRNA标志物组合, 利用上述标志物, 肾癌可以被可靠地鉴定。 本发明从 16个可检测肾癌的 miRNA标志物中 , 经进一步研究发现了其中的 8个 miRNA标 志物可显著性差异的检测肾癌 (p<0.05): hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-4306、 hsa-miR-l-3p; 并且, 经进 一步优化、 筛选, 得到了 AUC值高于前述 8个 miRNA标志物的组合, 即包括 hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p组合在 内的肾癌标志物组合, hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p有多重核酸分子组成, 每种核酸分子编码至少 — miRNA序 列。 具体序列信息如下表 1所示。 本发明公开的所有 miRNA序列均已经储存在 miRBase数据库中 (http://www.mirbase.org/) o 表 1. 8个 miRNA的序列表
Figure imgf000013_0001
本发明公开了一种肾癌诊断标志物组合, 包含编码 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p> hsa-miR-885-5p的多个核酸分子。 编码 hsa-miR-671-3p、 hsa-miR-518e-5p> hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p中的任何一个或任何两个或任何三个或任何四个或任何五个或任何六个核酸 分子在诊断为肾癌患者的尿液中的表达比对对照中的表达相比发生显著变化。 肾癌诊断最优 的实施方案中, 上述的多个核酸分子包括 hsa-miR-671-3p> hsa-miR-518e-5p、 hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p的 6个核酸分子组合。 本文所公开的 miRNA和方法用于对肾癌作出诊断。 因此, 作为基于本文所提供的方法的 确定的结果,已经使用本文所述的方法被诊断为患有肾癌的受试者可以 由于所述诊断而接受 必要的和相关的药物 (例如化学治疗剂)的治疗或被安排必要的治疗方案,例如放射治疗,手 术切除, 靶向疗法, 免疫疗法等。 因此, 本发明所公开的方法使得用本领域已知有效治疗肾 癌的化合物和组合物来治疗被诊断为患有肾癌的受试者。 因此, 在一" 实施例中, 如本文所 公开的方法使得受试者被诊断为患有肾癌, 其中然后向所述受试者施用如本领域已知的用于 肾癌的治疗。 如本文所公开的方法因此可以使得对肾癌进行治疗。 本文说明性描述的发明可以在不存在本文没有具体公开的任何一个或多个要素、 一个或 多个限制条件的情况下被适当地实施。 因此, 举例来说, 术语 “包含”、 “包括”、 “含有”等 说 明 书 应当被宽泛地并且不加限制地解读。 此外, 本文所用的术语和措辞已经被用作描述性术语而 非限制性术语, 并且并不意图在使用这些术语和措辞时排除所示的以及所述的特征或其部 分的任何等同方案, 但应当认识到的是, 各种改动方案在要求保护的本发明的范围内是可能 的。 因此, 应当了解的是, 尽管已经通过优选的实施方案和任选的特征明确地公开了本发明, 但是本文所公开的其中所体现的发明的改动方案和变化方案可以由本领域技术人员所采取, 并且这些改动方案和变化方案被认为落入本发明的范围内。 实施例 1:验证队列验证用于肾癌诊断的 8个 miRNA组合 一、 肾癌诊断标志物组合研发队列尿液样本要求, 采集和抽提 肾癌诊断标志物研究中使用了 2组样本, 分别为病例组合对照组,病例组包含 69例肾癌样 本, 对照组为 88例健康人尿液样本, 发现和验证了用于检测早期肾癌的生物标记物和生物标 记物组合。 研发队列中的肾癌病例和健康样本均来浙江大学医学院附属第二医院。 二、 逆转录-实时荧光 PCR操作过程及结果 按照 Zymo血清血浆 cfDNA快速抽提试剂盒操作步骤进行抽提,抽提完成后,利用 MIRXE 反转录试剂盒操作步骤进行反转录, 反转录完成后 qPCR扩增进行质检。 质检完成后进行样本 qPCR扩增,检测 312个 miRNA的表达量,癌症和健康对照中全部 312 个 miRNA的表达没有存在明显的分级, 初步找到可用于检测肾癌的 16个 miRNA标志物, 进一 步研究发现了具有显著性差异的检测肾癌的 8个 miRNA生物标记物,校正之后发现 8个 miRNA 的 P值小于 0.05; 其中在肾癌受试者中上调了 3个, 下调了 5个。 上调的 miRNA包括: hsa-miR-518e-5p > hsa-miR-153-3p 153和 hsa-miR-21-3p; 下调的 miRNA包括: hsa-miR-671-3p、 hsa-miR-4306、 hsa-miR-331-5p、 hsa-miR-l-3p和 hsa-miR-885-5po 在研发队歹 0中提取这 8个 miRNA绘制 Heatmap热图, 观察到癌症和对照受试者之间存在 miRNA表达量的显著差异, 如图 1所示。 三、 验证队列验证上述 8个 miRNA 病例-对照队列采用交叉验证 (Leave -one-out Cross-validation) 的方法检测这 8种尿液 miRNA生物标志物。 验证队列样本为 157个样本, 诊断效能 AUC=0.681 , 如图 2-A所示。 实施例 2: 验证队列验证用于肾癌诊断的最优 6个 miRNA组合 研发队列尿液样本要求, 采集和抽提, 逆转录-实时荧光 PCR操作过程及结果和实施例 1 中描述相同, 基于前面筛选出的 8个 miRNA, 分别使用 Lasso、 Stepwise以及穷举法等算法进行 miRNA组合的优化, 最终确定了优选的 6个 miRNA组合, 又使用交叉验证 ( Leave-one-out Cross-validation)方法验证 hsa-miR-671-3p、 hsa-miR-518e-5p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p> hsa-miR-885-5p在内的 6种尿液生物标志物组合。验证队列样本为 157个样本, 6个 miRNA组合在验证队列中的诊断效能 AUC=0.703 , 如 2-B所示。 模型判读的结果如图 3所示, 可以看到癌症患者的模型输出概率显著高于对照受试者, 说 明模型可以较好地对癌症患者和对照受试者进行预测分类。 基于上述对比确认 6个 miRNA组合为诊断肾癌的优选组合之一。 说 明 书 实施例 3: miRNA组合的优化 本实施例中,均采用交叉验证 (Leave-one -out Cross-validation)的方法检测多变量 miRNA 组合的 AUC值, 方法同实施例 1和 2。 计算验证队列中多 miRNA面板的 AUC值 针对临床试验使用的 8个 miRNA (hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-4306、 hsa-miR-l-3p), 任选 1个 miRNA为非变量, 再以该非变量的 miRNA为基准, 检测 1-, 2-, 3-, 4-, 5-, 6-, 7 -或 8-miRNA 的多变量组合的平均 AUC值, 分析 AUC值的差异变化, 结果见表 2。 从包含 2至 8个 miRNA的交叉验证实验的结果针对每个 miRNA计算来自训练和测试的平 均 AUC (表 2)。 当单独使用我们所鉴定到的 8个 miRNA时, 能够鉴定患有或处于发展肾癌风险 中的受试者。 结合两个或多个这些 miRNA进一步增加了 AUC值。 从表 2可以看出, 当三个或 更多个 miRNA组合时, 大多数多变量 miRNA组合的 AUC值可以达到较高水平。 表 2. 单独的 mirna或最多 8个 mima的组合的平均 AUC值
Figure imgf000015_0001
(DNA or RNA) hybridization. The length of the probe depends on the intended use as well as the desired specificity of the probe. Usually, the length of the probe is 20 to 500 (ie 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100, 110, 120, 130, 140, 150, 160, 170, 180 , 190, 200, 300, 400, 500) nucleotides, preferably 20 to 100, more preferably 20 to 50 nucleotides. For the detection of microRNAs, the probes are 12 to 30 nucleotides. The probes are used in various experimental settings, such as but not limited to Southern and Northern blotting, real-time PCR and in situ hybridization (In Situ Hybridization, ISH), and microarray experiments. Probes may be unlabeled, directly labeled or indirectly labeled, for example with biotin to which the streptavidin complex can subsequently bind. The label may be a molecule detectable by spectroscopic, photochemical, biochemical, immunochemical, chemical or other physical means. For example, suitable labels include 32P, fluorescent dyes, electron-dense reagents, enzymes (eg, commonly used in ELISAs), biotin, digoxigenin, or haptens and others that are or can be made detectable. entity. Labels can be introduced anywhere in the nucleic acid, eg 3', 5' or internally. The term "probe" also covers nucleic acids whose backbone composition differs, such as, but not limited to, peptide nucleic acid (PNA), locked nucleic acid (LNA), diol nucleic acid (GNA) and threose nucleic acid (TNA). The terms "index" and ""Mark" is used interchangeably herein and refers to a sign or signal of a disorder or to monitor a disorder. Such "disorder" refers to the biological state of a cell, tissue or organ, or to the state of health and/or disease of an individual. An indicator may be the presence or absence of molecules including, but not limited to, peptides, proteins, and nucleic acids, or may be a change in the expression level or pattern of such molecules in a cell, or in a tissue, organ, or individual. An indicator may be the occurrence, development or presence of a disease in an individual or a sign of the further progression of such a disease. An indicator can also be a sign of the risk of developing a disease in an individual. The term "fraction" refers to an integer or number, which may be determined mathematically, for example, by using computational models known in the art (which may include, but not limited to, SMV as an example), and is determined using many numbers It is calculated by any one of bibliographic equations and/or algorithms to achieve the purpose of statistical classification. Such a score is used to enumerate an outcome over a range of possible outcomes. The relevance and statistical significance of such a score depends on the size and quality of the underlying data set used to establish the range of results. For example, a blind sample can be input into an algorithm, and a score can be calculated based on the information provided by analyzing the blind sample. This enables the scoring of the blind sample to be generated. Based on this score, decisions can be made, such as how likely it is that the patient generating the blind sample has cancer or does not have cancer. The end values of the ranges may be defined logically based on the data provided or arbitrarily defined at the request of the experimenter. In both cases, the range needs to be defined before testing blind samples. The term "expression level" refers to the amount of a gene product present in vivo or in a sample at a particular point in time. The expression level can be measured/quantified/detected eg by the protein or mRNA expressed by the gene. Expression levels can be quantified, for example, by using the total amount of the same type of gene product (total protein or mRNA) to normalize the amount of the gene product of interest present in the sample, or to determine the amount of the gene product of interest/defined sample size (weight, volume, etc.). Expression levels can be measured or detected by any method known in the art, such as methods for the direct detection and quantification of the gene product of interest (e.g., mass spectrometry), or typically by a combination of a gene product of interest and a gene specific for the gene product of interest. A method for the indirect detection and measurement of a gene product of interest that works in combination with one or more different molecular or detection devices (eg, primers, probes, antibodies, protein scaffolds). It is also known to the skilled person to determine the level of gene copies, which also includes determining the absence or presence of one or more fragments (for example, by nucleic acid probes or primers, such as quantitative PCR, multiplex ligation-dependent probe amplification PCR) o The detection method for kidney cancer includes the following steps: a) Determination of hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa -miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p; b) compare hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-518e-5p, The expression level of hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p; wherein, the expression level of any one of the above miRNAs in the detected sample A significant change compared to the expression level of the corresponding miRNA in the reference sample indicates that the individual may have kidney cancer. Specifically, when the expression level of any miRNA in the detected kidney cancer is significantly different from that in the reference sample, the sample provider may have kidney cancer. In a preferred embodiment, when the expression levels of any 8 miRNAs in the tested urine sample are significantly different from the expression levels of miRNAs in the reference sample, the sample provider may suffer from renal cancer. In a more preferred embodiment, when the expression levels of the six miRNAs in the tested urine sample are significantly different from those in the reference sample, the sample provider may suffer from kidney cancer. In the present invention, the reference samples come from healthy human urine samples. On the other hand, the present invention also provides a method for detecting microRNA in renal cancer. Specifically, the method includes reverse transcription and real-time quantitative polymerase chain reaction (RT-qPCR). More specifically, in the real-time fluorescent quantitative polymerase chain reaction, the primer combination used is hsa-miR-671-3p) hsa-miR-518e-5p) hsa-miR-153-3p, hsa-miR-21- 3p, hsa-miR-33 l-5p, hsa-miR-885-5p detection of reverse transcription primers and PCR primer combinations. Appropriate adjustments and modifications can be made to the primer sequences of the present invention according to the sequences of related miRNAs, and these modified primer sequences can still be used to detect the miRNA markers. The present invention also includes these equivalent technical solutions. Compared with chips based on hundreds of molecules, the present invention uses RT-qPCR method, which has more reliable clinical feasibility and The instruction manual is practical, and the cost is low, and it is easier to popularize. In addition, the above-mentioned miRNA detection method is not limited to the RT-qPCR method provided by the present invention, other methods such as sequencing, microarray, northern blotting, bioluminescence and probe methods can also be used to detect the miRNA markers. The applicant found in the research that any 1 miRNA marker combination that can be used for the diagnosis of renal cancer, and any 2-5 miRNA marker combinations that can be used for the diagnosis of renal cancer. Using the above markers, renal cancer can be reliably diagnosed Identification. From the 16 miRNA markers that can detect kidney cancer, the present invention found that 8 miRNA markers can detect kidney cancer with significant difference (p<0.05): hsa-miR-671-3p> hsa -miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306, hsa-miR-l -3p; and, after further optimization and screening, a combination of the above-mentioned 8 miRNA markers with an AUC value higher than hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153- Kidney cancer marker combination including 3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-671-3p, hsa-miR-518e-5p , hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p are composed of multiple nucleic acid molecules, and each nucleic acid molecule encodes at least one miRNA sequence. The specific sequence information is shown in Table 1 below. All miRNA sequences disclosed in the present invention have been stored in the miRBase database (http://www.mirbase.org/) o Table 1. The sequence list of 8 miRNAs
Figure imgf000013_0001
The invention discloses a kidney cancer diagnostic marker combination, comprising hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR Multiple nucleic acid molecules of -331-5p>hsa-miR-885-5p. Encoding hsa-miR-671-3p, hsa-miR-518e-5p > hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p The expression of any one or any two or any three or any four or any five or any six nucleic acid molecules in the urine of a patient diagnosed with kidney cancer is significantly changed compared to the expression in a control. In an optimal embodiment for the diagnosis of kidney cancer, the above multiple nucleic acid molecules include hsa-miR-671-3p>hsa-miR-518e-5p, hsa-miR-153-3p>hsa-miR-21-3p>hsa -6 nucleic acid molecule combinations of miR-331-5p>hsa-miR-885-5p. The miRNAs and methods disclosed herein are useful for making a diagnosis of kidney cancer. Thus, as a result of a determination based on the methods provided herein, a subject who has been diagnosed with kidney cancer using the methods described herein may receive necessary and relevant drugs (e.g., chemotherapeutic agents) as a result of said diagnosis treatment or be arranged for necessary treatment options, such as radiation therapy, surgical resection, targeted therapy, immunotherapy, etc. Accordingly, the methods disclosed herein allow for the treatment of subjects diagnosed with renal cancer with compounds and compositions known in the art to be effective in treating renal cancer. Thus, in one embodiment, a method as disclosed herein results in a subject being diagnosed with kidney cancer, wherein the subject is then administered a treatment for kidney cancer as known in the art. As herein The disclosed method thus enables the treatment of kidney cancer. The invention described illustratively herein may be suitably implemented without any one or more elements, one or more limitations not specifically disclosed herein. Therefore , for example, the terms "comprising", "including", "containing", etc. This specification should be read broadly and without limitation. Furthermore, the terms and expressions used herein have been used as terms of description rather than limitation, and there is no intention in the use of these terms and expressions to exclude any equivalents to the features shown and described or parts thereof, but It should be appreciated that various modifications are possible within the scope of the claimed invention. Therefore, it should be understood that although the invention has been explicitly disclosed by way of preferred embodiments and optional features, modifications and variations of the invention embodied therein disclosed herein may be adopted by those skilled in the art, And such modifications and variations are considered to fall within the scope of the present invention. Example 1: Validation cohort Validation of 8 miRNA combinations for kidney cancer diagnosis 1. Urine sample requirements for the kidney cancer diagnostic marker combination research and development cohort. Two groups of samples were used in the collection and extraction of kidney cancer diagnostic markers research, respectively It is a case combination control group, the case group contains 69 cases of kidney cancer samples, and the control group is 88 cases of healthy human urine samples, discovering and validating biomarkers and biomarker combinations for detecting early kidney cancer. Kidney cancer cases and healthy samples in the R&D cohort came to the Second Affiliated Hospital of Zhejiang University School of Medicine. 2. The operation process and results of reverse transcription-real-time fluorescent PCR were extracted according to the operation steps of the Zymo Serum Plasma cfDNA Rapid Extraction Kit. After the extraction was completed, reverse transcription was performed using the operation steps of the MIRXE reverse transcription kit After completion, qPCR amplification was performed for quality inspection. After the quality inspection was completed, the samples were amplified by qPCR to detect the expression levels of 312 miRNAs. The expression levels of all 312 miRNAs in cancer and healthy controls were not significantly graded. 16 miRNA markers that can be used to detect kidney cancer were initially found, and further The study found 8 miRNA biomarkers with significant differences in the detection of kidney cancer. After correction, the P values of 8 miRNAs were found to be less than 0.05; among them, 3 were up-regulated and 5 were down-regulated in kidney cancer subjects. Up-regulated miRNAs include: hsa-miR-518e-5p > hsa-miR-153-3p 153 and hsa-miR-21-3p; Down-regulated miRNAs include: hsa-miR-671-3p, hsa-miR-4306, hsa -miR-331-5p, hsa-miR-l-3p and hsa-miR-885-5p o extracted these 8 miRNAs in the research and development team to draw Heatmap heat map, observed that there were differences between cancer and control subjects Significant differences in miRNA expression levels, as shown in Figure 1. III. Validation cohort Validation of the above 8 miRNA case-control cohorts The 8 urine miRNA biomarkers were detected by the method of Leave-one-out Cross-validation. There were 157 samples in the verification cohort, and the diagnostic performance was AUC=0.681, as shown in Figure 2-A. Example 2: Validation cohort Validation of the optimal 6 miRNA combination R&D cohort for kidney cancer diagnosis. The urine sample requirements, collection and extraction, reverse transcription-real-time fluorescent PCR operation process and results are the same as those described in Example 1, based on For the 8 miRNAs screened out above, the algorithms of Lasso, Stepwise and exhaustive method were used to optimize the miRNA combinations, and finally the optimal 6 miRNA combinations were determined, and the cross-validation (Leave-one-out Cross-validation) method was used Verify hsa-miR-671-3p, hsa-miR-518e-5p, hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-331-5p > hsa-miR-885-5p included 6 urine biomarker panels. There were 157 samples in the validation cohort, and the diagnostic efficacy of the 6 miRNA combinations in the validation cohort was AUC=0.703, as shown in 2-B. The results of model interpretation are shown in Figure 3. It can be seen that the model output probability of cancer patients is significantly higher than that of control subjects, indicating that the model can better predict and classify cancer patients and control subjects. Based on the above comparison, it is confirmed that the combination of 6 miRNAs is one of the preferred combinations for the diagnosis of renal cancer. Instructions Example 3: Optimization of miRNA combinations In this example, the method of cross-validation (Leave-one-out Cross-validation) was used to detect the AUC value of the multivariate miRNA combination, and the method was the same as in Examples 1 and 2. AUC values were calculated for the multi-miRNA panel in the validation cohort for the 8 miRNAs used in the clinical trial (hsa-miR-671-3p > hsa-miR-518e-5p > hsa-miR-153-3p > hsa-miR-21-3p , hsa-miR-331-5p, hsa-miR-885-5p> hsa-miR-4306, hsa-miR-1-3p), choose one miRNA as a non-variable, and then use the non-variable miRNA as a benchmark , to detect the average AUC value of a multivariate combination of 1-, 2-, 3-, 4-, 5-, 6-, 7- or 8-miRNA, and analyze the difference in AUC value. The results are shown in Table 2. The average AUC from training and testing was calculated for each miRNA from the results of cross-validation experiments involving 2 to 8 miRNAs (Table 2). When used alone, the 8 miRNAs we identified were able to identify subjects with or at risk of developing kidney cancer. Combining two or more of these miRNAs further increased AUC values. It can be seen from Table 2 that when three or more miRNAs are combined, the AUC values of most multivariate miRNA combinations can reach a higher level. Table 2. Average AUC values for miRNAs alone or combinations of up to 8 mimas
Figure imgf000015_0001
2、 包含用于诊断肾癌 miRNA组合 为了进一步验证肾癌诊断 miRNA组合的效用 , 分析包含上述表 2所列 miRNA示例性组合。 验证队列的平均 AUC、平均敏感性、平均特异性、平均阳性预测值 (PPV)和平均阴性预测值 (NPV) 分别如表 3所示。 包含 1-8个 miRNA特征的示例组合可用于预测分类癌症患者和对照受 试者, 其平均 AUC为 0.553至 0.681。 表 3. 1至 8个特征组合的平均 AUC、 敏感性、 特异性、 阳性预测值和阴性预测值
Figure imgf000015_0002
说 明 书 作为示例, 这些 miRNA在测试队列和验证队列中均表现出良好的性能。 接着选择这些 miRNA中的一个或多个,并与其他 miRNA进行组合。其中以 hsa-miR-518e-5p为固定 miRNA的 示例组合在进一步添加 miRNA的个数 (表 2中列出的其他 miRNA)后明显增加了 AUC(表 4)。 但是, 添加超过 6个 miRNA后, AUC开始小幅度下降。 具有 hsa-miR-l-3p和 hsa-miR-671-3p的 示例组合分别如表 5和 6所示。 随着不断增加组合的 miRNA数量, AUC逐渐增加, 但超过 6个 时 AUC开始下降。 以 hsa-miR-518e-5p为例, 比较单个 hsa-miR-518e-5p, 以及从剩余 7个 miRNA中的任意选 择添加一个、 二个、 三个、 四个、 五个或六个后与 hsa-miR-518e-5p所构成的多变量 miRNA组 合, 检测平均 AUC值, 分析 AUC值的差异变化, 结果见表 4。 表 4. hsa-miR-518e-5p与选自上述 miRNA特征组合的相关参数差异分析 平均 AUC、 敏感性、 特异性、 阳性预测值和阴性预测值
Figure imgf000016_0001
以 hsa-miR-l-3p为例, 比较单个 hsa-miR-l-3p, 以及从剩余 7个 miRNA中的任意选择添加 一个、 二个、 三个、 四个、 五个或六个后与 hsa-miR-l-3p所构成的多变量 miRNA组合, 检测 平均 AUC值, 分析 AUC值的差异变化, 结果见表 5。 表 5. hsa-miR-l-3p与选自上述 miRNA特征组合的的相关参数差异分析 平均 AUC、 敏感性、 特异性、 阳性预测值和阴性预测值
Figure imgf000016_0002
以 hsa-miR-671-3p为例, 比较单个 hsa-miR-671-3p, 以及从剩余 7个 miRNA中的任意选择 说 明 书 个、 三个、 四个、 五个或六个后与 hsa-miR-671-3p所构成的多变量 miRNA组合, 值, 分析 AUC值的差异变化, 结果见表 6。
Figure imgf000017_0001
6. hsa-miR-671-3p与选自上述 miRNA特征组合的的相关参数差异分析 平均 AUC、 敏感性、 特异性、 阳性预测值和阴性预测值
Figure imgf000017_0002
为更好的阐述本发明提供的多种 miRNA组合都具有不错的 AUC, 本发明列举了如表 7所 示的几种 AUCN0.681的 miRNA组合情形, 共性特点是 No.l至 No.32所示的 miRNA组合中均有 hsa-miR-518e-5p, 但并不意味着本发明要保护的 miRNA组合范围仅局限于表 7。 表 7. 示例性 miRNA组合及其各自的 AUC
Figure imgf000017_0003
说 明 书
Figure imgf000018_0001
本发明建立了一个完整的工作流程, 用于发现和验证尿液 miRNA生物标志物组合, 及成 功确定了用于检测肾癌的生物标志物及生物标志物组合。 需要说明的是, 本发明提供的尿液 miRNA标志物组合, 都是基于人源尿液样本的临床试 验数据进行统计、 筛选、 分析而得, 故适用于高人群特异性检测、 有 AUC显著差异表达的 miRNA组合; 但并不意味着这样的 miRNA组合可以通用于人源的血浆或组织样本的检测。 以上所述的实施例只是本发明的一种较佳的方案, 并非对本发明作任何形式上的限制, 在不超出权利要求所记载的技术方案的前提下还有其它的变体及改型。
2. Combinations of miRNAs used for the diagnosis of kidney cancer In order to further verify the utility of miRNA combinations for the diagnosis of renal cancer, the exemplary combinations of miRNAs listed in Table 2 above were analyzed. The mean AUC, mean sensitivity, mean specificity, mean positive predictive value (PPV) and mean negative predictive value (NPV) of the validation cohort are shown in Table 3, respectively. Exemplary combinations comprising 1-8 miRNA signatures can be used to predictively classify cancer patients and control subjects with mean AUCs ranging from 0.553 to 0.681. Table 3. Mean AUC, Sensitivity, Specificity, Positive Predictive Value, and Negative Predictive Value for 1 to 8 Feature Combinations
Figure imgf000015_0002
As an example, these miRNAs showed good performance in both the test cohort and the validation cohort. One or more of these miRNAs are then selected and combined with other miRNAs. The example combination in which hsa-miR-518e-5p was used as a fixed miRNA significantly increased AUC after further adding the number of miRNAs (other miRNAs listed in Table 2) (Table 4). However, after adding more than 6 miRNAs, AUC began to decrease slightly. Exemplary combinations with hsa-miR-1-3p and hsa-miR-671-3p are shown in Tables 5 and 6, respectively. As the number of combined miRNAs increases, AUC gradually increases, but AUC begins to decrease when more than 6 miRNAs are combined. Taking hsa-miR-518e-5p as an example, compare a single hsa-miR-518e-5p, and add one, two, three, four, five or six from any of the remaining 7 miRNAs with For the multivariate miRNA combination composed of hsa-miR-518e-5p, the average AUC value was detected, and the difference in AUC value was analyzed. The results are shown in Table 4. Table 4. Average AUC, Sensitivity, Specificity, Positive Predictive Value and Negative Predictive Value of hsa-miR-518e-5p and related parameters selected from the above miRNA feature combinations
Figure imgf000016_0001
Taking hsa-miR-l-3p as an example, compare a single hsa-miR-l-3p, and add one, two, three, four, five or six from any of the remaining 7 miRNAs with For the multivariate miRNA combination composed of hsa-miR-l-3p, the average AUC value was detected, and the difference in AUC value was analyzed. The results are shown in Table 5. Table 5. The average AUC, sensitivity, specificity, positive predictive value and negative predictive value of hsa-miR-1-3p and the relevant parameters of the combination of miRNA features selected from the difference analysis
Figure imgf000016_0002
Taking hsa-miR-671-3p as an example, compare a single hsa-miR-671-3p, and any selection from the remaining 7 miRNAs The multivariate miRNA combinations composed of hsa-miR-671-3p and hsa-miR-671-3p were described after one, three, four, five or six, and the difference in AUC value was analyzed. The results are shown in Table 6.
Figure imgf000017_0001
6. Difference analysis average AUC, sensitivity, specificity, positive predictive value and negative predictive value of hsa-miR-671-3p and related parameters selected from the combination of the above miRNA features
Figure imgf000017_0002
In order to better illustrate that various miRNA combinations provided by the present invention have good AUC, the present invention lists several miRNA combinations with AUCN0.681 as shown in Table 7, and the common features are No.1 to No.32 hsa-miR-518e-5p is present in all miRNA combinations shown, but it does not mean that the range of miRNA combinations to be protected in the present invention is limited to Table 7. Table 7. Exemplary miRNA combinations and their respective AUCs
Figure imgf000017_0003
manual
Figure imgf000018_0001
The present invention establishes a complete workflow for discovering and validating urine miRNA biomarker combinations, and successfully determines biomarkers and biomarker combinations for detecting kidney cancer. It should be noted that the urine miRNA marker combination provided by the present invention is obtained based on statistics, screening, and analysis of clinical test data of human urine samples, so it is suitable for high population-specific detection and has a significant difference in AUC Expressed miRNA combinations; but it does not mean that such miRNA combinations can be generally used in the detection of human-derived plasma or tissue samples. The embodiment described above is only a preferred solution of the present invention, and does not limit the present invention in any form, and there are other variations and modifications on the premise of not exceeding the technical solution described in the claims.
说 明 书manual
SEQUENCE LISTING SEQUENCE LISTING
<H0> 觅瑞 (杭州) 生物科技有限公司; 觅瑞实验室私人有限公司<H0> Miray (Hangzhou) Biotechnology Co., Ltd.; Miray Laboratory Private Limited
<120> 肾癌诊断用尿液 miRNA标志物、 诊断试剂及试剂盒<120> Urinary miRNA markers, diagnostic reagents and kits for the diagnosis of kidney cancer
<130> 2021.12 <130> 2021.12
<160> 8 <160> 8
<170> Patentin version 3.3 <170> Patent version 3.3
<210> 1 <210> 1
<211> 22 <211> 22
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence) <213> Artificial sequence (Artificial sequence)
<400> 1 cucuagaggg aagcgcuuuc ug 22 <400> 1 cucuagaggg aagcgcuuuc ug 22
<210> 2 <210> 2
<211> 17 <211> 17
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence) <213> Artificial sequence (Artificial sequence)
<400> 2 uggagagaaa ggcagua 17 <400> 2 uggagagaaa ggcagua 17
<210> 3 <210> 3
<211> 21 <211> 21
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence) <213> Artificial sequence (Artificial sequence)
<400> 3 caacaccagu cgaugggcug u 21 <400> 3 caacaccagu cgaugggcug u 21
<210> 4 <210> 4
<211> 22 <211> 22
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence) <213> Artificial sequence (Artificial sequence)
<400> 4 uggaauguaa agaaguaugu au 22 <400> 4 uggaauguaa agaaguaugu au 22
<210> 5 说 明 书 <210> 5 manual
<211> 21 <211> 21
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence)<213> Artificial sequence (Artificial sequence)
<400> 5 uccgguucuc agggcuccac c 21 <400> 5 uccgguucuc agggcuccac c 21
<210> 6 <210> 6
<211> 22 <211> 22
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence)<213> Artificial sequence (Artificial sequence)
<400> 6 uugcauaguc acaaaaguga uc 22 <400> 6 uugcauaguc acaaaaguga uc 22
<210> 7 <210> 7
<211> 22 <211> 22
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence)<213> Artificial sequence (Artificial sequence)
<400> 7 cuagguaugg ucccagggau cc 22 <400> 7 cuagguaugg ucccagggau cc 22
<210> 8 <210> 8
<211> 22 <211> 22
<212> RNA <212> RNA
<213> 人工序列 (Artificial sequence)<213> Artificial sequence (Artificial sequence)
<400> 8 uccauuacac uacccugccu cu 22 <400> 8 uccauuacac uacccugccu cu 22

Claims

权 利 要 求 书 claims
1. 一种肾癌诊断用尿液 miRNA标志物,其特征在于,选自如下 miRNA中的一个或多个: hsa-miR-518e-5p、 hsa-miR-671-3p、 hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p> hsa-miR-4306> hsa-miR-l-3po 1. a kidney cancer diagnosis urine miRNA marker, is characterized in that, is selected from one or more in following miRNA: hsa-miR-518e-5p, hsa-miR-671-3p, hsa-miR-153 -3p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p>hsa-miR-4306>hsa-miR-1-3p o
2. 根据权利要求 1所述的肾癌诊断用尿液 miRNA标志物,其特征在丑所述 miRNA标 志物选自如下 miRNA中的一个或多个: hsa-miR-518e-5p^ hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p^ hsa-miR-l-3po 2. kidney cancer diagnosis according to claim 1 uses urine miRNA marker, it is characterized in that described miRNA marker is selected from one or more in following miRNA: hsa-miR-518e-5p^hsa-miR -671-3p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p^ hsa-miR-l-3p o
3. 根据权利要求 1所述的肾癌诊断用尿液 miRNA标志物,其特征在于,所述 miRNA标 志物选自如下 miRNA中的一个或多个: hsa-miR-518e-5p^ hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p、 hsa-miR-4306o 3. kidney cancer diagnosis according to claim 1 uses urine miRNA marker, is characterized in that, described miRNA marker is selected from one or more in following miRNA: hsa-miR-518e-5p^hsa-miR -671-3p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p, hsa-miR-4306o
4. 根据权利要求 1所述的肾癌诊断用尿液 miRNA标志物,其特征在丑所述 miRNA标 志物选自如下 miRNA中的一个或多个: hsa-miR-518e-5p^ hsa-miR-671-3p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5po 4. kidney cancer diagnosis according to claim 1 uses urine miRNA marker, it is characterized in that described miRNA marker is selected from one or more in following miRNA: hsa-miR-518e-5p^hsa-miR -671-3p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p o
5. 根据权利要求 1〜 4中任一项所述的肾癌诊断用尿液 miRNA标志物, 其特征在于, 所 述 miRNA标志物至少为 2个时, 其中之一的 miRNA必须是 hsa-miR-518e-5po 5. The urine miRNA marker for kidney cancer diagnosis according to any one of claims 1 to 4, characterized in that, when there are at least two miRNA markers, one of the miRNA must be hsa-miR -518e-5p o
6. 根据权利要求 1〜 4中任 …项所述的肾癌诊断用尿液 miRNA标志物, 其特征在于, 所 述 miRNA标志物至少为 2个时, 其中之一的 miRNA必须是 hsa-miR-l-3po 6. The urine miRNA marker for kidney cancer diagnosis according to any of claims 1 to 4, characterized in that, when there are at least two miRNA markers, one of the miRNA must be hsa-miR -l-3p o
7. 根据权利要求 1所述的肾癌诊断用尿液 miRNA标志物,其特征在于,所述 miRNA标 志物包括如下任意一种或多种的组合: 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306、 hsa-miR-l-3p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p组成; 或 由 hsa-miR-518e-5p^ hsa-miR-153-3p^ hsa-miR-21-3p^ hsa-miR-331-5p> hsa-miR-885-5p^ hsa-miR-4306、 hsa-miR-l-3p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-l-3p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> 权 利 要 求 书 hsa-miR-885-5p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306> hsa-miR-l-3p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-21-3p^ hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p组成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-4306 > hsa-miR-l-3p组成; 或 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306组成; 或 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-l-3p组成; 或 由 hsa-miR-518e-5p^ hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p> hsa-miR-4306、 hsa-miR-l-3p组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p 组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-153-3p^ hsa-miR-21-3p> hsa-miR-885-5p 组成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p > hsa-miR-21-3p^ hsa-miR-331-5p^ hsa-miR-4306组 成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-21-3p> hsa-miR-331-5p、 hsa-miR-l-3p组 成; 或 由 hsa-miR-671-3p> hsa-miR-518e-5p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-885-5p 组成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-4306组 成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p> hsa-miR-331-5p> hsa-miR-l-3p组 成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p> hsa-miR-21-3p、 hsa-miR-331-5p> hsa-miR-885-5p 组成; 或 由 hsa-miR-518e-5p hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-4306、 hsa-miR-l-3p组成; 或 由 hsa-miR-518e-5p> hsa-miR-21-3p> hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-4306组 成; 或 权 利 要 求 书 由 hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p、 hsa-miR-l-3p组 成; 或 由 hsa-miR-671-3p、 hsa-miR-518e-5p> hsa-miR-21-3p、 hsa-miR-331-5p组成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-331-5p组成; 或 由 hsa-miR-518e-5p> hsa-miR-153-3p、 hsa-miR-21-3p、 hsa-miR-885-5p组成; 或 由 hsa-miR-518e-5p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-4306组成; 或 由 hsa-miR-518e-5p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-l-3p组成; 或 由 hsa-miR-518e-5p> hsa-miR-21-3p、 hsa-miR-331-5p、 hsa-miR-885-5p组成; 或 由 hsa-miR-518e-5p、 hsa-miR-21-3p、 hsa-miR-331-5p组成。 7. The urine miRNA marker for kidney cancer diagnosis according to claim 1, wherein the miRNA marker comprises any one or more of the following combinations: hsa-miR-671-3p>hsa- miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR-4306, hsa-miR-l- 3p; or consist of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885 -5p>hsa-miR-4306; or consisting of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331- 5p>hsa-miR-885-5p>hsa-miR-l-3p; or composed of hsa-miR-518e-5p^hsa-miR-153-3p^hsa-miR-21-3p^hsa-miR-331 -5p>hsa-miR-885-5p^hsa-miR-4306, hsa-miR-l-3p; or by hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153- 3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p >hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-l-3p; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153- 3p>hsa-miR-21-3p>hsa-miR-331-5p> The claim consists of hsa-miR-885-5p; or consists of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR- 4306>hsa-miR-l-3p; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885 -5p>hsa-miR-4306; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21-3p^hsa-miR-331-5p>hsa-miR-885- 5p>hsa-miR-l-3p; or composed of hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-4306 >hsa-miR-l-3p composition; or hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR-331-5p>hsa-miR-885-5p >hsa-miR-4306 composition; or hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p>hsa -miR-l-3p; or by hsa-miR-518e-5p^hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-885-5p>hsa-miR-4306, hsa- Composed of miR-1-3p; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p; or consist of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-153-3p^ hsa-miR-21-3p>hsa-miR-885-5p; or consist of hsa-miR-671 -3p>hsa-miR-518e-5p>hsa-miR-21-3p^hsa-miR-331-5p^hsa-miR-4306; or consisting of hsa-miR-671-3p>hsa-miR-518e- 5p>hsa-miR-21-3p>hsa-miR-331-5p, hsa-miR-l-3p; or composed of hsa-miR-671-3p>hsa-miR-518e-5p>hsa-miR-21 -3p>hsa-miR-331-5p>hsa-miR-885-5p; or composed of hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR- 331-5p, hsa-miR-4306; or composed of hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p>hsa-miR-331-5p>hsa-miR-l -3p; or by hsa-miR-518e-5p>hsa-miR-153-3p>hsa-miR-21-3p, hsa-miR-331-5p>hsa-miR-885-5p; or by hsa -miR-518e-5p consisting of hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-4306, hsa-miR-l-3p; or consisting of hsa-miR-518e-5p>hsa-miR -21-3p> composed of hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-4306; or The claim consists of hsa-miR-518e-5p, hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885-5p, hsa-miR-1-3p; or consists of hsa-miR -671-3p, hsa-miR-518e-5p>hsa-miR-21-3p, hsa-miR-331-5p; or composed of hsa-miR-518e-5p>hsa-miR-153-3p, hsa- Composed of miR-21-3p, hsa-miR-331-5p; or composed of hsa-miR-518e-5p>hsa-miR-153-3p, hsa-miR-21-3p, hsa-miR-885-5p; Or consist of hsa-miR-518e-5p>hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-4306; or consist of hsa-miR-518e-5p>hsa-miR-21-3p , hsa-miR-331-5p, hsa-miR-1-3p; or by hsa-miR-518e-5p>hsa-miR-21-3p, hsa-miR-331-5p, hsa-miR-885- 5p; or composed of hsa-miR-518e-5p, hsa-miR-21-3p, hsa-miR-331-5p.
8. 一种肾癌诊断试剂, 其特征在于, 包括特异性检测权利要求 1~7中任一项所述的尿液 miRNA标志物的试剂 8. A diagnostic reagent for kidney cancer, characterized in that it includes a reagent for specifically detecting the urine miRNA marker described in any one of claims 1 to 7
9. 一种肾癌诊断用试剂盒, 其特征在于, 包括以权利要求 1〜 7 中任一项所述的尿液 miRNA标志物作为标准品, 以及检测权利要求 1~7中任一项所述的尿液 miRNA标志物的相 应引物。 9. A diagnostic kit for kidney cancer, characterized in that it comprises the urine miRNA marker described in any one of claims 1 to 7 as a standard product, and detects the miRNA marker described in any one of claims 1 to 7. Corresponding primers for the urine miRNA markers described above.
10. 一种如权利要求 1〜 7中任一项所述的尿液 miRNA标志物的应用, 其特征在于, 用于 制备早期诊断和 /或复发监测的产品; 优选的, 包括如下一种或几种的功能: 10. An application of the urine miRNA marker according to any one of claims 1 to 7, characterized in that, it is used to prepare products for early diagnosis and/or recurrence monitoring; preferably, it includes the following one or Several functions:
1) 鉴定或辅助鉴定肾癌; 1) Identification or auxiliary identification of renal cell carcinoma;
2) 诊断或辅助诊断初发肾癌; 2) Diagnosis or auxiliary diagnosis of primary renal cancer;
3) 诊断或辅助诊断复发肾癌。 3) Diagnosis or auxiliary diagnosis of recurrent renal cell carcinoma.
11. 一种采用如权利要求 1〜 7中任一项所述的尿液 miRNA标志物来早期诊断和 /或复发 监测肾癌的方法, 其特征在于, 包括如下步骤: 步骤 1 , 检测从受试者获得的尿液样品中 miRNA的存在; 步骤 2, 测量尿液样品中 miRNA标志物中的至少 1种 miRNA的表达水平; 步骤 3, 使用基于先前所测量的 miRNA的表达水平的分数, 来早期诊断和 /或复发监测 受试者患有肾癌的可能性。 11. A method for early diagnosis and/or recurrence monitoring of kidney cancer using the urine miRNA marker according to any one of claims 1 to 7, characterized in that it comprises the following steps: Step 1, detecting the The presence of miRNA in the urine sample obtained by the test subject; Step 2, measuring the expression level of at least one miRNA in the miRNA markers in the urine sample; Step 3, using a score based on the expression level of the previously measured miRNA, to Early diagnosis and/or recurrence monitors the likelihood that the subject has kidney cancer.
PCT/IB2022/020080 2021-12-09 2022-12-09 Urine mirna marker for renal cancer diagnosis, diagnostic reagent and kit WO2023105295A2 (en)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
CN202111499051 2021-12-09
CN202111499051.X 2021-12-09
CN202210028225.2A CN114182021A (en) 2021-12-09 2022-01-11 Urine miRNA marker for kidney cancer diagnosis, diagnostic reagent and kit
CN202210028225.2 2022-01-11

Publications (2)

Publication Number Publication Date
WO2023105295A2 true WO2023105295A2 (en) 2023-06-15
WO2023105295A3 WO2023105295A3 (en) 2023-08-03

Family

ID=80606804

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/IB2022/020080 WO2023105295A2 (en) 2021-12-09 2022-12-09 Urine mirna marker for renal cancer diagnosis, diagnostic reagent and kit

Country Status (2)

Country Link
CN (1) CN114182021A (en)
WO (1) WO2023105295A2 (en)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114182021A (en) * 2021-12-09 2022-03-15 觅瑞(杭州)生物科技有限公司 Urine miRNA marker for kidney cancer diagnosis, diagnostic reagent and kit

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP6898630B2 (en) * 2016-10-11 2021-07-07 国立大学法人 鹿児島大学 Methods and kits that use the amount of miRNA as an indicator of urothelial cancer
US20230066287A1 (en) * 2019-01-16 2023-03-02 Ospedale San Raffaele S.R.L. Biomarkers for renal cell carcinoma
CN114182021A (en) * 2021-12-09 2022-03-15 觅瑞(杭州)生物科技有限公司 Urine miRNA marker for kidney cancer diagnosis, diagnostic reagent and kit

Also Published As

Publication number Publication date
WO2023105295A3 (en) 2023-08-03
CN114182021A (en) 2022-03-15

Similar Documents

Publication Publication Date Title
Ozawa et al. A microRNA signature associated with metastasis of T1 colorectal cancers to lymph nodes
JP6203209B2 (en) Plasma microRNA for detection of early colorectal cancer
JP5940517B2 (en) Methods for predicting breast cancer recurrence under endocrine therapy
Shah et al. Combining serum microRNA and CA-125 as prognostic indicators of preoperative surgical outcome in women with high-grade serous ovarian cancer
WO2020048518A1 (en) Group of genes for molecular typing of medulloblastoma and use thereof
WO2023105297A2 (en) Urine mirna marker for bladder cancer diagnosis, diagnostic reagent and kit
CN108949992B (en) Biomarker related to esophageal squamous carcinoma and grading thereof
CN109055555B (en) Lung cancer early stage metastasis diagnosis marker and kit and application thereof
CN111187840B (en) Biomarker for early breast cancer diagnosis
US20230257826A1 (en) Methods for predicting prostate cancer and uses thereof
CN110229899B (en) Plasma marker combinations for early diagnosis or prognosis prediction of colorectal cancer
WO2023105295A2 (en) Urine mirna marker for renal cancer diagnosis, diagnostic reagent and kit
WO2023105296A2 (en) Urine mirna marker for prostate cancer diagnosis, diagnostic reagent and kit
CN107299129B (en) Application of circulating nucleic acid as breast cancer biomarker
US20150329911A1 (en) Nucleic acid biomarkers for prostate cancer
ES2856232B2 (en) BIOMARKERS TO PREDICT THE RESPONSE OF A SUBJECT TO BCG THERAPY, METHODS AND USES BASED ON THEM
CN110592219B (en) lncRNA diagnosis and treatment marker for breast cancer
KR102096499B1 (en) MicroRNA-3960 for diagnosing or predicting recurrence of colorectal cancer and use thereof
JP5884219B2 (en) Method for detecting urothelial cancer based on miRNA expression profiling
CN112795640B (en) Application of three microRNAs as RA markers and kit thereof
US20210147944A1 (en) Methods for monitoring and treating prostate cancer
WO2015121663A1 (en) Biomarkers for prostate cancer
Xu et al. Identification of an Excellent PCR-Based Classifier to Predict Tumor Relapse in Stage II/III Colorectal Cancer and Its Clinical Application Irrespective of Consensus Molecular Subtypes
CN117867114A (en) Primer combination, method and kit for detecting ERBB2 gene expression level
CN113528655A (en) Marker and detection kit for drug resistance of docetaxel chemotherapy of breast cancer

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 22903652

Country of ref document: EP

Kind code of ref document: A2