WO2022145617A1 - Method for synthesizing novel compounds potassium all-trans retinoate and potassium 9-cis retinoate, and pharmaceutical composition for cardiovascular treatment comprising same - Google Patents
Method for synthesizing novel compounds potassium all-trans retinoate and potassium 9-cis retinoate, and pharmaceutical composition for cardiovascular treatment comprising same Download PDFInfo
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- WO2022145617A1 WO2022145617A1 PCT/KR2021/011131 KR2021011131W WO2022145617A1 WO 2022145617 A1 WO2022145617 A1 WO 2022145617A1 KR 2021011131 W KR2021011131 W KR 2021011131W WO 2022145617 A1 WO2022145617 A1 WO 2022145617A1
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- Prior art keywords
- potassium
- retinoate
- cis
- trans
- hsa
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- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/185—Acids; Anhydrides, halides or salts thereof, e.g. sulfur acids, imidic, hydrazonic or hydroximic acids
- A61K31/19—Carboxylic acids, e.g. valproic acid
- A61K31/20—Carboxylic acids, e.g. valproic acid having a carboxyl group bound to a chain of seven or more carbon atoms, e.g. stearic, palmitic, arachidic acids
- A61K31/203—Retinoic acids ; Salts thereof
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P9/00—Drugs for disorders of the cardiovascular system
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C67/00—Preparation of carboxylic acid esters
- C07C67/30—Preparation of carboxylic acid esters by modifying the acid moiety of the ester, such modification not being an introduction of an ester group
- C07C67/317—Preparation of carboxylic acid esters by modifying the acid moiety of the ester, such modification not being an introduction of an ester group by splitting-off hydrogen or functional groups; by hydrogenolysis of functional groups
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C67/00—Preparation of carboxylic acid esters
- C07C67/48—Separation; Purification; Stabilisation; Use of additives
- C07C67/58—Separation; Purification; Stabilisation; Use of additives by liquid-liquid treatment
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C69/00—Esters of carboxylic acids; Esters of carbonic or haloformic acids
- C07C69/608—Esters of carboxylic acids having a carboxyl group bound to an acyclic carbon atom and having a ring other than a six-membered aromatic ring in the acid moiety
Definitions
- the present invention provides a method for absorption of 9-cis ⁇ -carotene into the intestines without decomposition in the stomach in consideration of the human body absorption and biologic synthesis route so that 9-cis ⁇ -carotene is not excreted during oral administration. It relates to a method for synthesizing Potassium all-trans retinoate and Potassium 9-cis retinoate, which can be easily delivered and can increase absorption, and a pharmaceutical composition for cardiovascular treatment comprising the same.
- 9-cis ⁇ -carotene is one of the carotenoid components and is a general term for a group of yellow, orange, and red pigments widely seen in the biological world. It is an unstable substance that is easy to do. In addition, it is not soluble in water, and unlike flavonoid pigments or betalain pigments with the same color, it dissolves well in solvents that dissolve fat, such as benzene and ether.
- 9-cis ⁇ -carotene is a powerful antioxidant known to lower the risk of cancer and cardiovascular disease. In addition, it has a protective effect against skin damage caused by sunlight and prevents the generation of wrinkles or age spots, and even exhibits an effect of delaying aging. And, it is a carotenoid-based substance that prevents complications from diabetes, improves lung function, and has antibacterial action.
- 9-cis ⁇ -carotene is a different isomer from the well-known all-trans ⁇ -carotene.
- 9-cis ⁇ -carotene When administered orally, 9-cis ⁇ -carotene is absorbed into the body through the stomach and intestines and is separated into 9-cis retinoid and all-trans retinoid. Thereafter, 9-cis retinoic acid and all-trans retinoic acid are biosynthesized in the human body by liver metabolism.
- 9-cis retinoic acid in the form of biosynthesized retinoic acid acts on the retinoid X receptor of macrophages.
- LXL/RXR and PPAR/RXR heterodimers are involved in the pathogenesis of atherosclerosis. That is, in macrophage metabolism, LDL (low-density lipoprotein) is broken down into HDL (high-density lipoprotein) and released into the blood.
- All-trans retinoic acid is a vitamin A derivative that acts by binding to two nuclear receptor families (retinoic acid receptors (RAR) and retinoid X receptors (RXR (RXR)) within the cell. Normalization of follicular keratinization and cohesion of keratinocytes. As a result, follicle occlusion and microcomedon formation are reduced, and all-trans retinoic acid inhibits inflammation and platelet activation, and has the effect of reducing the expression of P-selection and fibrinogen.
- RAR retinoic acid receptors
- RXR retinoid X receptors
- 9-cis ⁇ -carotene has a problem in that most of it is not absorbed and is excreted with a LogP value of >9, which measures the absorption rate in the intestine when administered orally. Accordingly, the present invention develops a chemical formulation that is not decomposed from the stomach in an isolated form, is easily delivered to the intestine, and increases the absorption rate in consideration of the human body absorption and biologic synthesis route of 9-cis ⁇ -carotene, and the solubility of the substance in water is improved.
- An object of the present invention is to provide a pharmaceutical composition for cardiovascular treatment, including Potassium all-trans retinoate and Potassium 9-cis retinoate, which improves absorbability by increasing and is not easily destroyed by gastric juice and can be safely delivered to the intestine.
- the present invention is a powerful antioxidant and 9-cis ⁇ -carotene, which lowers the risk of cancer and cardiovascular disease, has a LogP value of >9 that measures absorption in the intestine when orally administered.
- the present invention is an all-trans retinal synthesis step for synthesizing all-trans retinal by inducing a Knoevenagel condensation reaction of ⁇ -C15 aldehyde and 3-Methyl-2-butenal with the method for synthesizing Potassium all-trans retinoate and Potassium 9-cis retinoate.
- step (go) preparing a solution of all-trans retinal in step (a) in methanol, and reacting it with a solution of Na2PO4 and KMnO4 in sterile distilled water (DW) to synthesize all-trans retinoic acid (B); Methyl b-formylcrotonate is added to EtOH and maintained by adding a 50% aqueous KOH solution, and after adding a 38.8% ethanol solution of 9-cis phosphonium chloride, a 50% aqueous KOH solution is added to maintain the reaction.
- DW sterile distilled water
- the present invention provides a pharmaceutical composition in the form of Potassium all-trans retinoate and Potassium 9-cis retinoate synthesized using all-trans retinoic acid and 9-cis retinoic acid as precursors as a pharmaceutical composition for cardiovascular treatment.
- the present invention is a powerful antioxidant and 9-cis ⁇ -carotene, which has an effect of lowering the risk of cancer and cardiovascular disease, has a LogP value of >9, which measures the absorption rate in the intestine when administered orally, and prevents most of it from being absorbed and excreted.
- a cardiovascular treatment that can be administered, that is, a treatment for atherosclerosis and treatment for angina.
- Figures 1 to 19 of the present invention are the same as Figures 1 to 19 of the previously applied Korean Patent Application Nos. 10-2020-0185144 and 10-2021-90290.
- Figure 2 shows the all-trans retinoic acid synthesis step.
- Figure 3 shows the synthesis step of 9-cis retinoic acid.
- Figure 4 shows the Potassium all-trans retinoate synthesized according to the present invention.
- IOV Intergrative Genomics Viewer
- 16 is a graph showing the concentration confirmation graph of the THP-1 cell applied MTS Assay of PATRA according to Experimental Example 3 of the present invention.
- the present invention can provide a method for synthesizing all-trans retinoic acid and 9-cis retinoic acid from synthesized all-trans retinal and 9-cis phosphonium chloride (salt).
- a pharmaceutical composition for cardiovascular treatment or blood clotting inhibition comprising the steps of obtaining the synthesized Potassium all-trans retinoate compound and Potassium 9-cis retinoate A pharmaceutical composition is provided.
- the compounds all-trans retinal and 9-cis phosphonium chloride (salt) used in the synthesis of all-trans retinoic acid and 9-cis retinoic acid of the present invention are Korean Patent Application No. 10-2019-0137160 registered as an earlier application by the applicant of the present invention All-trans retinal and 9-cis phosphonium chloride (salt) produced during the synthesis of 9-cis ⁇ -carotene can be used (see Fig. 1)
- 1A shows the synthesis reaction of 2.2.6 trimethyl cyclohexanone and (Z)-3-Methylpent-2-en-4-yn-1-ol.
- 1B shows a process of mixing a Rochelle salt such as LiAlH4 as a reducing agent for reducing acetylene to E-ethylene.
- a Rochelle salt such as LiAlH4 as a reducing agent for reducing acetylene to E-ethylene.
- sodium sulfate (Na2SO4) was mixed and stirred for 30 minutes.
- 1C shows a method for producing an aldehyde by the selective oxidation reaction of an alcohol.
- a mixture of 5.75 g of manganese dioxide (MnO 2 ) was added to 10.5 g of the compound obtained in Example 2 above in 5 ml of DCM.
- MnO 2 manganese dioxide
- the product was filtered through a Celite® filter and washed with DCM to obtain 7.40 g (yield 79%).
- 1D shows a method of synthesizing C 18 hydroxy ester with Phosphonium ylides in the synthesized C 15 Aldaehyde.
- 1E shows a reaction in which alcohol is dehydrated with HCOOH acid to form ethylene. Add 0.4 ml of 80% formic acid to 6.50 g of the above hydroxy ester solution dissolved in hexane. After stirring at room temperature for 12 hours, 3.9 g (yield 69%) was obtained.
- 1F shows a method of synthesizing C 17 alcohol by mixing Rochelle salt and using THF as a reducing agent for reduction.
- 1) Slowly add 0.48 g of lithium aluminum hydride (LiAlH4) to THF (25ml) for safety and mix until emulsion of the mixed solution disappears. After completion, it was mixed with 3.5 g of the ester formed above and stirred for 12 hours.
- 2) After cooling to 0°C, sodium sulfate (Na2SO4) was mixed and stirred for 30 minutes. 3) Filtered with Celite filter to remove fine particles. 4) This was purified on a silica gel column with hexane and ethylacetate solvent to obtain a product of 2.19g (yield 70%).
- 1G shows a method for producing Aldehyde by selective oxidation of C 17 alcohol.
- 1H shows the reaction of alkylating ketone with methyl group through Grignard reaction.
- FIG. 1 shows the process of inducing the Hydro Oxidation reaction. 1) Add 0.50 g of the above extract in 20 ml of DCM, add 0.18 g of MnO 2 , and stir the mixture at room temperature. After completion of the reaction, the product was filtered through a Celite filter. 2) Washed with DCM. The solvent was removed in vacuo and 0.39 g (79%) of the pure compound was obtained after chromatographic purification.
- 1K shows a method for obtaining an alcohol group by reducing the ester group with a LiAlH4 reducing agent.
- LiAlH4 lithium aluminum hydride
- THF quench gas
- Na2SO4 sodium sulfate
- L in FIG. 1 represents a reaction for replacing an alcohol group with a phosphonium salt.
- M in FIG. 1 shows the step of synthesizing all-trans retinal by inducing a reaction of Knoevenagel condensation between ⁇ -C15 aldehyde and 3-Methyl-2-butenal.
- Figure 2 shows the all-trans retinoic acid synthesis step.
- a 0.25 M solution of all-trans retinal synthesized as shown in FIG. 1 was prepared in methanol, and 1 equivalent of Na2PO4 and KMnO4 were dissolved in sterile distilled water (DW) to prepare a 0.25M solution. Mix and stir at room temperature for 30 minutes.
- DW sterile distilled water
- For crystallization of all-trans retinoic acid it is dissolved in IPA (isopropyl alcohol, isopropanol) at 60 ⁇ 70°C, cooled slowly to 0 ⁇ 5°C to crystallize, and the crystals are filtered and dried before storage.
- IPA isopropyl alcohol, isopropanol
- Figure 3 shows the synthesis step of 9-cis retinoic acid.
- methyl b-formylcrotonate is added to EtOH (80 mL), and 50% KOH aqueous solution is added for 20 minutes, and maintained at 0-5°C.
- KOH 50% aqueous solution is added for 20 minutes, and the reaction is further maintained at 0-5 °C.
- FIG. 4 shows Potassium all-trans retinoate obtained according to the synthesis of the present invention
- FIG. 5 shows Potassium 9-cis retinoate.
- compositions for cardiovascular treatment Potassium all-trans retinoate and Potassium 9-cis retinoate can be synthesized using all-trans retinoic acid and 9-cis retinoic acid known as Tretinoin and Alitretinoin as precursors.
- Tretinoin All-trans retinoic acid is a treatment for acute promyeloid leukemia (undifferentiated myeloid leukemia, immature myeloblastic, mature myeloblastic, myelocytic monocytic, monocytic, megakaryotic and erythroleukemia). It is prescribed to be adjustable at 30 - 52 mg/m2 once a day, and is used as a treatment for suppressing bleeding tendencies such as intravascular coagulation disease (DIC).
- DIC intravascular coagulation disease
- Alitretinoin (9-cis retinoic acid) is known to treat severe/recalcitrant chronic hand eczema.
- PGA chronic severe hand eczema
- FIG. 6 shows an IR analysis result according to Experimental Example 1 of the present invention.
- a clear symmetric stretch at 1400 cm -1 and a strong asymmetric stretch at 1600 cm -1 were found. This means that the carboxylic acid functional group of All trans retinoic acid was substituted with the caboxylate salt. Also, a significantly lower stretch was confirmed in the vicinity of 1700 cm -1 compared to the reagent All trans retinoic acid. This means that it has a property of a bond that is significantly different from that of the starting material.
- FIG. 7 shows 1 H-NMR results according to Experimental Example 1 of the present invention.
- Bruker's 500MHz NMR equipment was used, and as the NMR solvent, DMSO was applied to the starting material (All trans retinoic acid) and the synthetic material (Potassium all trans retinoate).
- a ⁇ n above the peak on the NMR spectrum means hydrogen corresponding to a ⁇ n of each material structure drawn on the upper left of the analysis data. Comparing 1 H-NMR spectrum of ATRA and PATRA, ATRA pattern is maintained while yellow It can be observed that the part marked with is shifted to the right. This means that electrons are concentrated when -OH of ATRA is substituted with O - K + .
- the concentration range of the PATRA compound was set in units of 15ppm - 30ppm, and UV-VIS Spectrophotometer was measured at 5ppm intervals, and a calibration curve with reliability (R 2 ) 0.9925 value (closer to 1, higher reliability) was drawn through the result. . This is later used to measure the purity of the material to be synthesized.
- UV-VIS spectrophotometer The absorbance curve was shown in the 250nm-450nm region, and the highest absorbance value was shown in the wavelength band 340nm.
- FIG. 11 shows the results of UV-VIS spectrophotometer analysis according to Experimental Example 1 of the present invention.
- the P9CRA compound dissolved in water was placed in a disposable plastic cell and UV-VIS spectrophotometer was measured.
- UV-VIS spectrophotometer was measured.
- a similar pattern was observed in the UV wavelength band (300-400 nm) absorbed by 9-cis retinoic acid.
- Spectrum results are shown. Through these results, it can be confirmed that the basic 9-cis retinoic acid structure did not change while having the property of dissolving in water due to the binding of Potassium.
- the concentration range of the P9CRA compound was set in units of 20ppm to 35ppm, and UV-VIS Spectrophotometer was measured at 5ppm intervals, and a calibration curve of reliability (R 2 ) 0.9941 value (closer to 1, higher reliability) was drawn through the result. . This is later used to measure the purity of the material to be synthesized.
- UV-VIS spectrophotometer Absorbance curve was shown in the 290nm-400nm region, and the highest absorbance value was shown in the wavelength band 337nm.
- the amount of drug applied to blood and blood vessels related cells was determined through NTS Assay to determine the amount of drug applied as a cardiovascular treatment agent.
- NGS Next-Generation Sequencing by applying Potassium 9-cis-retinoate (P9CRA) to fibroblast cells and Primary Human Intestinal Smooth Muscle Cells (ISMC) to confirm the gene response of drugs in vascular cells ) and analyzed the data.
- P9CRA Potassium 9-cis-retinoate
- ISMC Primary Human Intestinal Smooth Muscle Cells
- PATRA Potassium All trans retinoate
- TMS Next-Generation Sequencing
- Example 1 of the present invention the chemical and biological stability of Potassium all trans retinoate (PATRA) & Potassium 9-cis-retinoate (P9CRA) was performed in vitro and in vivo.
- the purpose of this study is to test and evaluate Potassium all trans retinoate (PATRA) and Potassium 9-cis-retinoate (P9CRA) in vitro/in vivo ADME. This may include solubility tests, plasma metabolic stability tests, and liver micrometabolism tests.
- test drug For solubility test, an excess of the test drug was added to a test tube containing 1 mL of DDW or artificial gastric juice (SGF), and the mixture was shaken incubated at room temperature for 48 hours. After reaching equilibrium solubility, the test tube was centrifuged at 3000 rpm for 10 min. After taking the supernatant, the undissolved test drug was removed using a syringe filter. Filtrate was placed in a test tube and analyzed.
- SGF artificial gastric juice
- mice plasma, rat plasma and human plasma stored in a -20C freezer were thawed.
- the final DMSO concentration of the test drug was less than 1%.
- the final test drug concentration was 20 ⁇ M
- Procaine drug was used as a positive control
- the metabolic reaction of the test drug was started immediately after the test drug was added, and samples were sampled for 0, 15, 30, 60, 120, 180, 240 minutes. (However, procaine is sampled for 5, 10, 30, 60, and 120 minutes)
- sample treatment ice cold acetonitrile containing IS was added and voltexing was performed for 30 seconds to terminate the metabolic reaction.
- the metabolic test sample after completion of the reaction was centrifuged at 14000 rpm for 15 minutes. The supernatant was separated, placed in a test tube, and analyzed by HPLC system.
- MLM, RLM, and HLM fractions stored in a -80°C freezer were thawed. Preincubate the MLM, RLM, and HLM fractions dispersed in NADPH and metabolic test buffer for 5 minutes (1 mg/mL microsomal protein concentration). The final concentration of DMSO of the test drug was less than 1% (final concentration was 20 ⁇ M). (If necessary, use a drug such as buspirone as a positive control) The metabolic reaction of the test drug was started immediately after the test drug was added, and samples were sampled for 0, 15, 30, 60, and 120 minutes. For sample treatment, ice cold acetonitrile containing IS was added, and rapid voltexing was performed for 30 seconds to terminate the metabolic reaction. The metabolic test sample after completion of the reaction was centrifuged at 14000 rpm for 15 minutes. The supernatant was separated, placed in a test tube, and analyzed by HPLC system.
- a standard solution of at least 5 concentrations was prepared for the test substance, treated by the pretreatment method described above, and analyzed by UHPL-DAD.
- the evaluation method is as follows. As a solubility test, an excess of the test drug was quantitatively analyzed after incubation for 48 hours.
- the metabolic stability test evaluated the metabolic stability of the test drug in plasma (mouse, rat, human) and liver microsomes (mouse, rat, human).
- liver microsome metabolic stability shows the results of liver microsome metabolic stability.
- both P9CRA and PATRA showed similar stability in mice (% remaining 83.1% vs 83.4% at 30 min).
- PATRA was more stable than P9CRA, and both compounds were stable (% remaining 78.3% vs 84.3% at 30 min).
- the liver microsomal metabolic stability of P9CRA was not as good as that of PATRA, and P9CRA was relatively more stable (% remaining 64.5% vs 86.7% at 30 min).
- Solubility test result compound Solubility in distilled water (DDW) ( ⁇ g/mL) Solubility in Artificial Gastric Fluid (SGF) ( ⁇ g/mL) P9CRA 3.76 ⁇ 1.08 0.18 ⁇ 0.11 PATRA 1.18 ⁇ 0.52 0.69 ⁇ 0.17
- Tables 2 to 4 below show the results of the metabolic stability test in plasma. In terms of plasma stability, both P9CRA and PATRA were metabolically stable without any differences between species (mouse, rat, human).
- the MTS Assay shown in FIG. 12 was used, and the cells were sprayed so that the optimal concentration was 1.25uM. After culturing for 24 hours in a 5% CO 2 incubator, 1 ml of trizol reagent was sprayed on 75T-flask for RNA isolation. After waiting at room temperature for 5 minutes, scrape the cells well with a scraper, transfer the destroyed cells to a 1.5ml e-tube, store them in a -80 freezer, and transfer the samples to an NGS analysis institution (ebiogen).
- P9CRA 9-cis-retinoate
- the horizontal axis represents log2 (Normalized data) of the control group, and the vertical axis represents log2 (Normalized data) of the experimental group (P9CRA).
- the genes located in the black oblique line in the middle are genes having the same expression value in both samples, and the red and green lines indicate the double standard increase/decrease, respectively.
- Genes located above the red slanted line are genes that are more than doubled in the experimental group compared to the control group, and genes located below the green slanted are genes that are down 2 times or more in the experimental group compared to the control group.
- the increased number of red genes was 592 and the decreased number of green genes was 452.
- FIG. 14 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 2 of the present invention.
- the Intergrative Genomics Viewer (IGV) observed the gene pattern by confirming the result of mapping the reads to the reference genome on the image.
- the BAM file was reconstructed using the organized database for the locations where gene insertions and deletions frequently occur according to P9CRA drug treatment.
- a red mark of the control shown in FIG. 14 indicates a heterogenotype.
- the colored part of the coverage of the Bam file is the heterogenotype, that is, the base part where Single Nucleotide polymorphism (SNP) has occurred.
- the nucleotide is gray, the red is T (Thymine), and the green is A (Adenine).
- blue is C (Cytosine), yellow is G (Guanine), and the color change means the part where the base mutation has occurred, and the purple part is when the base is inserted when comparing the sequence of the reference genome with the sample. indicates the part
- Table 8 shows the KEGG Mapper Search Results according to Experimental Example 2 of the present invention.
- the pathway analysis was carried out using the KEGG mapping method to classify the gene group having a total of 27 pathways and the field of action of each group as follows, find detailed gene items in the relevant category, and classify their roles did As shown in Table 8, it was confirmed that it was related to inflammation, blood, cholesterol, calcium membrane receptor-related mRNA and coding protein.
- KEGG Mapper Search Result hsa04080 Neuroactive ligand-receptor interaction - Homo sapiens (human) (2) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa:6915 TBXA2R; thromboxane A2 receptor: blood clotting hsa04979 Cholesterol metabolism - Homo sapiens (human) (2) hsa:19 ABCA1; ATP binding cassette subfamily A member 1: cholesterol metabolism hsa:348 APOE; apolipoprotein E: cholesterol metabolism hsa05200 Pathways in cancer - Homo sapiens (human) (2) [Cancer network viewer] hsa:1050 CEBPA; CCAAT enhancer binding protein alpha: cholesterol metabolism hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa04020 Calcium signaling pathway - Homo sapiens (human) (2)
- GenomeNet Database Resources were analyzed based on the gene category items and search result data of Kyoto University Bioinformatics Center. 15 shows the number of genes corresponding to the gene ortholog through DAVID analysis.
- the number of genes corresponding to the gene ortholog through DAVID analysis is as follows. DAVID analysis was carried out to identify the category of mRNA that acts the most among the mRNAs related to inflammation, blood, cholesterol, and calcium membrane receptors above, and the target mRNA for cholesterol metabolism and inflammatory reaction mechanisms (secondary alcohol action mechanism, steroid action mechanism) As shown in FIG. 15 , it was confirmed that is significantly reduced (Down Count).
- Atherosclerosis is a process that starts from inflammation and develops into 'atheromatous plaque' by combining with Ca 2+ ions in the process of being wrapped in blood, encapsulated in the blood vessel wall, and coagulated. Therefore, P9CRA causes an inflammatory response due to a decrease in human immunity, which can be seen in the atherosclerosis pathogenesis process, accumulates in the blood through cholesterol intake, and a disorder in the process of decomposing cholesterol in macrophages and cholesterol and fibrils. It has been shown that it has a role in inhibiting the progress of cholesterol stenosis, which is deposited in blood vessels by blood coagulation by Nogel, P-selection, and plaque phenomenon caused by calcium ions, or alleviating the disease and removing plaque. It was confirmed through gene pathway analysis.
- ABC ATP-binding cassette
- Adipose major apolipoprotein (APOE) present in the post-blood or lymphatic system encodes an endoplasmic reticulum membrane protein that activates increases in plasma cholesterol and triglycerides and clearance of VLDL residues, and regulates adipogenesis and glucose homeostasis and is a sterol regulatory element binding protein (SREBP), cleavage activation protein (SCAP), and sterol-sensing domains such as 3-hydroxy-3-methyl glutaryl-coenzyme A (HMG-CoA) reductase activate binding and negotiation actions.
- SREBP sterol regulatory element binding protein
- SCAP cleavage activation protein
- HMG-CoA 3-hydroxy-3-methyl glutaryl-coenzyme A reductase
- This mRNA shows that the activity of C/EBP protein encoded by CEBPA can regulate the expression of genes involved in cell cycle regulation as well as body weight homeostasis, and that the mutation is suppressed by the gene mRNA, which is an acute myeloid leukemia pathogen.
- the value is 2.941 times.
- SQLE mRNA Squalene monooxygenase
- Squalene monooxygenase is a gene that coats a substance used as an inhibitor of a component called squalene epoxidase.
- This protein has an antifungal mechanism of action.
- the multidrug inhibitory mechanism of action is one method of treating hypercholesterolemia.
- THP-1 cells After mixing the number of THP-1 cells with the cell media as many as 5 x 10 6 , spray them in a T-75 flask, and incubate in a 5% CO 2 incubator overnight. PATRA is sprayed on the cells to an optimal concentration of 0.625uM at a non-cytotoxic concentration through the MTS Assay shown in FIG. 16, and incubated in a 5% CO 2 incubator for 24 hours.
- the cell suspension in the flask is transferred to a 50ml tube and centrifuged at 1300rpm, 3min, 25°C for cell down. After removing the supernatant and spraying 1ml of trizol reagent for RNA isolation on the remaining cell pellet, pipetting so that the cells are well destroyed, transfer the trizol solution containing the cells to a 1.5ml e-tube and store the sample in -80 freezer It was delivered to an NGS institution (ebiogen).
- the genes located in the black oblique line in the middle are genes having the same expression value in both samples, and the red and green lines indicate the double standard increase/decrease, respectively.
- Genes located above the red slanted line are genes that are more than doubled in the experimental group compared to the control group, and genes located below the green slanted are genes that are down 2 times or more in the experimental group compared to the control group.
- the increased number of red genes was 47, and the decreased number of green genes was 195.
- FIG. 18 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 3 of the present invention.
- the Intergrative Genomics Viewer (IGV) observed the gene pattern by confirming the result of mapping the reads to the reference genome on the image.
- the BAM file was reconstructed using a database organized for the locations where gene insertions and deletions frequently occur according to PATRA drug treatment.
- a control red mark in FIG. 18 indicates a heterogenotype.
- the colored part in the coverage of the Bam file in FIG. 18 is the base part where the heterogenotype, that is, single nucleotide polymorphism (SNP) occurred, and the nucleotide is gray, and the green is A (Adenine), as a result PATRA It is confirmed that the heterozygous type according to the drug treatment produces SNPs compared to the control. That is, it can be confirmed that the PATRA drug can show a mutation in the A (adenine) genotype in monocytes (THP-1 cells).
- Table 10 shows the KEGG Mapper Search Results according to Experimental Example 3 of the present invention.
- the pathway analysis was carried out using the KEGG mapping method, and the gene group having a total of 35 pathways and the field of action of each group were divided, and the detailed gene items of the related categories were found and their roles were divided. It was confirmed that it was related to the mRNA and coding proteins related to blood coagulation, anti-tumor, hematopoiesis and antioxidant in Table 10.
- GenomeNet Database Resources were analyzed based on the gene category items and search result data of Kyoto University Bioinformatics Center.
- FIG. 19 shows the number of genes corresponding to gene orthologs through DAVID analysis according to Experimental Example 3 of the present invention.
- the number of genes corresponding to the gene ortholog through DAVID analysis is as follows. DAVID analysis was carried out to confirm the category that acts the most among the blood coagulation, anti-tumor, hematopoietic, and antioxidant-related mRNAs, and the cellular component action mechanism and the blood clotting action mechanism target mRNA significantly increased (Up). Count) was confirmed. Table 11 shows the evaluation results according to Experimental Example 3 of the present invention.
- the mRNA gene group of the DNA binding pathway item in the KEGG Mapper that is, hsa04350 TGF-beta signaling pathway detailed mRNA hsa:3397, hsa:3398, hsa04550 Signaling pathways regulating pluripotency of stem cells, hsa04390 Hippo signaling pathway, hsa04015 Rap1 signaling
- KEGG Mapper Search Result hsa04350 TGF-beta signaling pathway Homo sapiens (human) (3) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein: hsa:3398 ID2; inhibitor of DNA binding 2 hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05144 Malaria - Homo sapiens (human) (2) hsa:6382 SDC1; syndecan 1 ; blood clot hsa:7057 THBS1; thrombospondin 1: blood clotting hsa04145 Phagosome - Homo sapiens (human) (2) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05016 Huntington disease - Homo sapiens (human) (2) hsa:33
- THBS1 mRNA binds to fibrinogen, fibronectin, laminin, collagen types V and VII and integrins alpha-V / beta -1 to platelets. It plays a role in aggregation, angiogenesis and tumorigenesis.
- SDC1 mRNA coding protein (Syndecan 1) is a transmembrane (type I) heparan sulfate proteoglycan.
- TUBB4B mRNA is a protein that docks the ciliary basal body-plasma membrane and has antitumor tubulin inhibitory effects.
- the PODXL gene encodes a member of the CD34 sialomucin protein family and aids in hematopoiesis.
- the expression of PODXL gene by PATRA applied to EC cells was increased by 2.971, and the change in PODXL2 expression was increased by 2.992 times.
- the SOD gene exerts antioxidant effects through the formation of glycosylated homotetramers fixed to the extracellular matrix and cell surface through interaction with heparan sulfate proteoglycan and collagen. That is, it exerts an antioxidant effect through the glucose coating effect from the cells.
- the increased expression of SOD2 showed a 3.039-fold increase compared to the Control group.
- the absorption rate is excellent in the human body, and it is a powerful antioxidant that can lower the risk of cancer and cardiovascular disease. There is a possibility.
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Abstract
Provided is a pharmaceutical composition for cardiovascular treatment comprising a potassium all-trans retinoate compound and a potassium 9-cis retinoate compound. It has confirmed that the pharmaceutical composition is metabolically stable without being dissolved or destroyed in water and artificial gastric juice. The pharmaceutical composition has the effects of inhibiting disorders, observed in the process of pathogenesis of atherosclerosis, which cause an inflammatory response due to decreased immunity, accumulate cholesterol in the blood by the ingestion of cholesterol, and are caused in the process of decomposing cholesterol in macrophages, inhibiting stenosis due to cholesterol which is deposited in blood vessels by blood coagulation of cholesterol, fibrinogel, and P-selection, inhibiting the process of a plaque phenomenon caused by calcium ions, alleviating a developed disease, or removing the plaque.
Description
본 발명은 9-시스 베타카로틴(9-cis β-carotene)이 경구투여 시 배설되지 않도록 9-cis β-carotene의 인체흡수 및 생체제 합성 경로를 고려하여 분리된 형태에서 위에서 분해되지 않고 장까지 전달이 용이하고 흡수율을 높일 수 있는 Potassium all-trans retinoate 및 Potassium 9-cis retinoate의 합성방법 및 이를 포함하는 심혈관 치료용 약학적 조성물에 관한 것이다.The present invention provides a method for absorption of 9-cis β-carotene into the intestines without decomposition in the stomach in consideration of the human body absorption and biologic synthesis route so that 9-cis β-carotene is not excreted during oral administration. It relates to a method for synthesizing Potassium all-trans retinoate and Potassium 9-cis retinoate, which can be easily delivered and can increase absorption, and a pharmaceutical composition for cardiovascular treatment comprising the same.
심혈관 치료제 즉, 죽상동맥경화증 치료제 및 협심증 치료제로 9-시스 베타카로틴(9-cis β-carotene)의 연구 및 개발이 많이 진행되었다. 9-cis β-carotene은 카로티노이드 성분의 하나이며, 생물계에서 널리 볼 수 있는 노랑, 주황, 빨간색의 빛을 가진 색소군(色素群)의 총칭하며, 분자 속에 많은 2중 결합이 있어 공기 속에서 산화하기 쉬운 불안정한 물질이다. 또한, 물에 녹지 않으며, 같은 빛깔을 가진 플라보노이드 색소나 베타레인 색소와는 달리 벤젠, 에테르 등 지방을 녹이는 용매에 잘 녹는다. Research and development of 9-cis β-carotene as a cardiovascular treatment, that is, atherosclerosis treatment and angina pectoris treatment has progressed a lot. 9-cis β-carotene is one of the carotenoid components and is a general term for a group of yellow, orange, and red pigments widely seen in the biological world. It is an unstable substance that is easy to do. In addition, it is not soluble in water, and unlike flavonoid pigments or betalain pigments with the same color, it dissolves well in solvents that dissolve fat, such as benzene and ether.
9-cis β-carotene는 강력한 항산화제로 암과 심혈관 질환의 위험을 낮추는 것으로 알려져 있다. 또한, 태양광에 의한 피부 손상의 보호효과 및 주름이나 검버섯 생성을 방어하며, 노화 지연 효과까지 나타낸다. 그리고, 당뇨병 합병증을 예방해주고 폐기능 증진 및 향균 작용을 하는 카로티노이드계의 물질이다.9-cis β-carotene is a powerful antioxidant known to lower the risk of cancer and cardiovascular disease. In addition, it has a protective effect against skin damage caused by sunlight and prevents the generation of wrinkles or age spots, and even exhibits an effect of delaying aging. And, it is a carotenoid-based substance that prevents complications from diabetes, improves lung function, and has antibacterial action.
9-cis β-carotene은 일반적으로 잘 알려져 있는 all-trans β-carotene과 이성질체가 다른 물질이다. 9-cis β-carotene은 경구투여 시 위와 장을 거쳐 인체 내에 흡수되어 9-cis retinoid와 all-trans retinoid 형태로 분리된다. 이후, 간의 대사작용에 의해 9-cis retinoic acid와 all-trans retinoic acid로 인체 내에서 생합성된다. 생합성된 retinoic acid형태의 9-cis retinoic acid는 대식세포의 레티노이드 X 수용체(Retinoid X receptor)에 작용한다. 9-cis β-carotene is a different isomer from the well-known all-trans β-carotene. When administered orally, 9-cis β-carotene is absorbed into the body through the stomach and intestines and is separated into 9-cis retinoid and all-trans retinoid. Thereafter, 9-cis retinoic acid and all-trans retinoic acid are biosynthesized in the human body by liver metabolism. 9-cis retinoic acid in the form of biosynthesized retinoic acid acts on the retinoid X receptor of macrophages.
이것은 일종의 핵 수용체로 유전자 발현을 조절한다. 서브 패밀리 1 핵 수용체인 CAR, FXR, LXR, PPAR, PXR, RAR, TR 및 VDR과 함께 여러 가지 이종이량체(Heterodimer)를 형성 한다. LXL/RXR 및 PPAR/RXR 이종이량체는 죽상 경화증 발병 경로에 관여한다. 즉, 대식세포(Macrophage) 대사작용에서 LDL(low-density lipoprotein)을 HDL(high-density lipoprotein)로 분해 시켜 혈액으로 내보낸다. It is a kind of nuclear receptor that regulates gene expression. It forms several heterodimers with subfamily 1 nuclear receptors CAR, FXR, LXR, PPAR, PXR, RAR, TR and VDR. LXL/RXR and PPAR/RXR heterodimers are involved in the pathogenesis of atherosclerosis. That is, in macrophage metabolism, LDL (low-density lipoprotein) is broken down into HDL (high-density lipoprotein) and released into the blood.
all-trans retinoic acid는 세포 내에서 두 가지 핵 수용체 패밀리 (retinoic acid receptors (RAR) 및 retinoid X receptors (RXR (RXR))에 결합하여 작용하는 비타민 A 유도체이다. 난포 각질화의 정상화와 각질 세포의 응집력 감소로 난포 폐색과 미세 코메돈 형성이 감소한다. 또한, all-trans retinoic acid는 염증과 혈소판 활성화를 억제하며, P-selection 및 fibrinogen의 발현감소 효과가 있다.All-trans retinoic acid is a vitamin A derivative that acts by binding to two nuclear receptor families (retinoic acid receptors (RAR) and retinoid X receptors (RXR (RXR)) within the cell. Normalization of follicular keratinization and cohesion of keratinocytes. As a result, follicle occlusion and microcomedon formation are reduced, and all-trans retinoic acid inhibits inflammation and platelet activation, and has the effect of reducing the expression of P-selection and fibrinogen.
그러나 9-cis β-carotene은 경구 투여 시 장에서의 흡수율을 측정하는 LogP 값이 >9으로 대부분 흡수되지 않고 배설되는 문제점이 있다. 이에 본 발명은 9-cis β-carotene의 인체흡수 및 생체제 합성 경로를 고려하여 분리된 형태에서 위에서 분해되지 않고 장까지 전달이 용이하고 흡수율을 높이는 케미컬 제형을 개발하고, 물질의 물에서 용해도를 높여 흡수성을 향상하고 위액에 잘 파괴되지 않고 장까지 안전하게 전달될 수 있는 안정성이 우수한 Potassium all-trans retinoate 및 Potassium 9-cis retinoate를 포함하는 심혈관 치료용 약학적 조성물을 제공하고자 한다.However, 9-cis β-carotene has a problem in that most of it is not absorbed and is excreted with a LogP value of >9, which measures the absorption rate in the intestine when administered orally. Accordingly, the present invention develops a chemical formulation that is not decomposed from the stomach in an isolated form, is easily delivered to the intestine, and increases the absorption rate in consideration of the human body absorption and biologic synthesis route of 9-cis β-carotene, and the solubility of the substance in water is improved. An object of the present invention is to provide a pharmaceutical composition for cardiovascular treatment, including Potassium all-trans retinoate and Potassium 9-cis retinoate, which improves absorbability by increasing and is not easily destroyed by gastric juice and can be safely delivered to the intestine.
본 발명은 강력한 항산화제로 암과 심혈관 질환의 위험을 낮추는 9-cis β-carotene은 경구 투여 시 장에서의 흡수율을 측정하는 LogP 값이 >9으로 대부분 흡수되지 않고 배설되는 상기 문제점을 해결하기 위하여, 위에서 분해되지 않고 장까지 전달이 용이하고 흡수율을 높이는 케미컬 제형의 Potassium all-trans retinoate 및 Potassium 9-cis retinoate의 합성방법 및 이를 포함하는 심혈관 치료용 약학적 조성물 또는 혈액응고 억제용 약학적 조성물을 제공하고자 한다.The present invention is a powerful antioxidant and 9-cis β-carotene, which lowers the risk of cancer and cardiovascular disease, has a LogP value of >9 that measures absorption in the intestine when orally administered. To provide a method for synthesizing Potassium all-trans retinoate and Potassium 9-cis retinoate in chemical formulations that are not degraded in the stomach and easily delivered to the intestine and increase absorption, and a pharmaceutical composition for cardiovascular treatment or a pharmaceutical composition for inhibiting blood clotting comprising the same want to
본 발명은 Potassium all-trans retinoate 및 Potassium 9-cis retinoate 합성방법은 β-C15 aldehyde와 3-Methyl-2-butenal을 Knoevenagel condensation의 반응을 유도하여 all-trans retinal를 합성하는 all-trans retinal 합성단계(가); 상기 (가) 단계의 all-trans retinal을 Methanol에 용해한 용액을 준비하고, Na2PO4와 KMnO4을 멸균증류수(DW)에 녹인 용액과 반응시켜 all-trans retinoic acid를 합성하는 단계(나); EtOH에 Methyl b-formylcrotonate을 넣고 KOH 50% 수용액을 넣어 유지하고, 9-cis phosphonium chloride 38.8% 에탄올 용액을 첨가 후 KOH 50% 수용액을 첨가하여 반응을 유지시키는 9-cis retinoic acid의 합성단계(다); 상기 (나)단계의 all-trans retinoic acid와 (다)단계의 9-cis retinoic acid 각각에 대하여 Hexane 첨가 후 KOH를 적가하여 Potassium all-trans retinoate 및 Potassium 9-cis retinoate 합성하는 단계(라)로 이루어진 것일 수 있다.The present invention is an all-trans retinal synthesis step for synthesizing all-trans retinal by inducing a Knoevenagel condensation reaction of β-C15 aldehyde and 3-Methyl-2-butenal with the method for synthesizing Potassium all-trans retinoate and Potassium 9-cis retinoate. (go); preparing a solution of all-trans retinal in step (a) in methanol, and reacting it with a solution of Na2PO4 and KMnO4 in sterile distilled water (DW) to synthesize all-trans retinoic acid (B); Methyl b-formylcrotonate is added to EtOH and maintained by adding a 50% aqueous KOH solution, and after adding a 38.8% ethanol solution of 9-cis phosphonium chloride, a 50% aqueous KOH solution is added to maintain the reaction. Synthesis step of 9-cis retinoic acid (C ); To each of the all-trans retinoic acid of step (b) and 9-cis retinoic acid of step (c), after adding hexane, KOH was added dropwise to synthesize Potassium all-trans retinoate and Potassium 9-cis retinoate (d) may have been made
본 발명은 심혈관치료를 위한 약학 조성물로 All-trans retinoic acid와 9-cis retinoic acid를 전구체로 사용하여 합성한 Potassium all-trans retinoate 및 Potassium 9-cis retinoate 형태의 약학적 조성물을 제공한다.The present invention provides a pharmaceutical composition in the form of Potassium all-trans retinoate and Potassium 9-cis retinoate synthesized using all-trans retinoic acid and 9-cis retinoic acid as precursors as a pharmaceutical composition for cardiovascular treatment.
본 발명은 강력한 항산화제로 암과 심혈관 질환의 위험을 낮추는 효과가 있는 9-cis β-carotene이 경구 투여 시 장에서의 흡수율을 측정하는 LogP 값이 >9으로 대부분 흡수되지 않고 배설되는 것을 방지하여 경구투여가 가능한 심혈관 치료제 즉, 죽상동맥경화증 치료제 및 협심증 치료제로 적용할 수 있는 효과가 있다.The present invention is a powerful antioxidant and 9-cis β-carotene, which has an effect of lowering the risk of cancer and cardiovascular disease, has a LogP value of >9, which measures the absorption rate in the intestine when administered orally, and prevents most of it from being absorbed and excreted. There is an effect that can be applied as a cardiovascular treatment that can be administered, that is, a treatment for atherosclerosis and treatment for angina.
또한 본 발명의 실험예에 따르면 물과 인공위액에서 용해되거나 파괴되지 않고, 대사적으로 안정함을 확인하였고, 죽상동맥경화증 발병 절차에서 볼 수 있는 사람의 면역력이 감소하여 염증반응를 일으키고, 콜레스테롤 섭취를 통해 혈액에 쌓이고, 콜레스테롤을 대식세포(Macrophage)에서 분해하는 과정에서의 장애와 콜레스테롤과 피브리노겔, P-셀랙션에 의한 혈액 응고에 의해 혈관 내 침착되는 콜레스테롤 협착반응 그리고 칼슘이온에 의한 플라그 현상의 진행 과정을 억제하거나 발병된 병증을 완화 및 플라그(Plaque)를 제거하는 역할을 수행하는 효과가 있음을 확인하였다.In addition, according to the experimental example of the present invention, it was confirmed that it is not dissolved or destroyed in water and artificial gastric juice, and is metabolically stable. Disorders in the process of decomposing cholesterol in macrophages and cholesterol stenosis, which are deposited in blood vessels by blood coagulation by cholesterol, fibrinogel, and P-selection, and plaque caused by calcium ions It was confirmed that there is an effect of inhibiting the progression of the disease or of alleviating the disease and removing plaque.
본 발명의 도면 1 내지 19는 선출원된 한국 특허출원번호 제10-2020-0185144호 및 10-2021-90290호의 도면 1 내지 19와 동일한 것이다.Figures 1 to 19 of the present invention are the same as Figures 1 to 19 of the previously applied Korean Patent Application Nos. 10-2020-0185144 and 10-2021-90290.
도 1은 본 발명의 all-trans retinal 및 9-cis phosphonium chloride(salt) 합성단계를 나타낸다.1 shows the synthesis step of all-trans retinal and 9-cis phosphonium chloride (salt) of the present invention.
도 2은 all-trans retinoic acid 합성단계를 나타낸다.Figure 2 shows the all-trans retinoic acid synthesis step.
도 3는 9-cis retinoic acid의 합성단계를 나타낸다. Figure 3 shows the synthesis step of 9-cis retinoic acid.
도 4은 본 발명에 따라 합성된 Potassium all-trans retinoate를 나타낸다.Figure 4 shows the Potassium all-trans retinoate synthesized according to the present invention.
도 5는 본 발명에 따라 합성된Potassium 9-cis retinoate를 나타낸다. 5 shows Potassium 9-cis retinoate synthesized according to the present invention.
도 6은 본 발명의 실험예 1에 따른 IR 분석결과를 나타낸다. 6 shows an IR analysis result according to Experimental Example 1 of the present invention.
도 7은 본 발명의 실험예 1에 따른 1H-NMR 결과를 나타낸다.7 shows 1 H-NMR results according to Experimental Example 1 of the present invention.
도 8은 본 발명의 실험예 1에 따른 UV-VIS spectrophotometer 분석결과이다.8 is a UV-VIS spectrophotometer analysis result according to Experimental Example 1 of the present invention.
도 9는 본 발명의 실험예 1에 따른 IR 분석결과를 나타낸다. 9 shows an IR analysis result according to Experimental Example 1 of the present invention.
도 10은 본 발명의 실험예 1에 따른 1H-NMR 결과를 나타낸다.10 shows 1 H-NMR results according to Experimental Example 1 of the present invention.
도 11은 본 발명의 실험예 1에 따른 UV-VIS spectrophotometer 분석결과이다.11 is a UV-VIS spectrophotometer analysis result according to Experimental Example 1 of the present invention.
도 12는 실험예 2에 따른 P9CRA의 ISMC적용 MTS Assay 농도확인 그래프이다.12 is a graph for confirming the concentration of the ISMC applied MTS Assay of P9CRA according to Experimental Example 2.
도 13은 실험예 2에 따른 전체 유전자의 변화의 분포를 나타내는 Scatter Plot을 나타낸다.13 shows a Scatter Plot showing the distribution of changes in all genes according to Experimental Example 2.
도 14은 본 발명의 실험예 2에 따른 Intergrative Genomics Viewer (IGV) Mapping grap를 나타낸다. 14 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 2 of the present invention.
도 15은 DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수를 나타낸다. 15 shows the number of genes corresponding to gene orthologs through DAVID analysis.
도 16는 본 발명의 실험예 3에 따른 PATRA의 THP-1 세포 적용 MTS Assay 농도확인 그래프를 나타낸다. 16 is a graph showing the concentration confirmation graph of the THP-1 cell applied MTS Assay of PATRA according to Experimental Example 3 of the present invention.
도 17은 본 발명의 실험예 3에 따른 전체 유전자의 변화의 분포를 나타내는 Scatter Plot을 나타낸다. 17 shows a scatter plot showing the distribution of changes in all genes according to Experimental Example 3 of the present invention.
도 18는 본 발명의 실험예 3에 따른 Intergrative Genomics Viewer (IGV) Mapping grap를 나타낸다. 18 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 3 of the present invention.
도 19은 본 발명의 실험예 3에 따른 DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수를 나타낸다. 19 shows the number of genes corresponding to gene orthologs through DAVID analysis according to Experimental Example 3 of the present invention.
본 발명은 합성된 all-trans retinal 및 9-cis phosphonium chloride(salt) 로부터 all-trans retinoic acid와 9-cis retinoic acid로 합성하는 방법을 제공할 수 있다. 또한, 합성된 all-trans retinoic acid와 9-cis retinoic acid 각각에 Hexane 첨가 후, 합성된 Potassium all-trans retinoate 화합물 및 Potassium 9-cis retinoate를 얻는 단계로 이루어진 심혈관 치료용 약학적 조성물 또는 혈액응고 억제용 약학적 조성물을 제공한다. The present invention can provide a method for synthesizing all-trans retinoic acid and 9-cis retinoic acid from synthesized all-trans retinal and 9-cis phosphonium chloride (salt). In addition, after adding hexane to each of the synthesized all-trans retinoic acid and 9-cis retinoic acid, a pharmaceutical composition for cardiovascular treatment or blood clotting inhibition comprising the steps of obtaining the synthesized Potassium all-trans retinoate compound and Potassium 9-cis retinoate A pharmaceutical composition is provided.
본 발명의 all-trans retinoic acid와 9-cis retinoic acid 합성에 사용되는 화합물 all-trans retinal 및 9-cis phosphonium chloride(salt)는 본 발명의 출원인이 선출원 등록한 한국 특허출원번호 제10-2019-0137160호의 9-cis β-carotene의 합성 과정에서 생성되는 all-trans retinal 및 9-cis phosphonium chloride(salt)를 사용할 수 있다(도 1 참조) The compounds all-trans retinal and 9-cis phosphonium chloride (salt) used in the synthesis of all-trans retinoic acid and 9-cis retinoic acid of the present invention are Korean Patent Application No. 10-2019-0137160 registered as an earlier application by the applicant of the present invention All-trans retinal and 9-cis phosphonium chloride (salt) produced during the synthesis of 9-cis β-carotene can be used (see Fig. 1)
도 1의 A는 2.2.6 trimethyl cyclohexanone과 (Z)-3-Methylpent-2-en-4-yn-1-ol의 합성반응을 나타낸다. 1) 먼저 5ml THF 중 10g의 2.2.6 trimethyl cyclohexanone 용액에 교반 혼합하였다. 2) 0~5℃에서 바람직하게는 0℃에서 100ml THF 중 11.2 ml (1.5 배수) (Z)-3-Methylpent-2-en-4-yn-1-ol을 교반하고 이후, 용액에. Ethylmagnesiumbromide (3 배수)를 에테르 (etherial) 용액 7ml를 혼합한 용액을 첨가하고 실온이 될 때까지 30 ~ 40분 동안 교반하였다. 3) 상기 1)과 2) 혼합물을 12시간 그리고 Ammonium chloride (NH4Cl)을 교환하여 포화시켰다. (Ammonium chloride 포화 수용액을 첨가하여 반응을 멈추었다.) 4) 이를 hexane과 ethylacetate 용매으로 실리카겔 컬럼상으로 정제하여 13.5 g (수율 80%)의 생성물을 얻었다.1A shows the synthesis reaction of 2.2.6 trimethyl cyclohexanone and (Z)-3-Methylpent-2-en-4-yn-1-ol. 1) First, a solution of 10 g of 2.2.6 trimethyl cyclohexanone in 5 ml THF was stirred and mixed. 2) Stir 11.2 ml (1.5 fold) (Z)-3-Methylpent-2-en-4-yn-1-ol in 100 ml THF at 0-5° C. preferably at 0° C. and then into solution. Ethylmagnesiumbromide (3 folds) was added to a solution of 7 ml of etherial solution and stirred for 30 to 40 minutes until the temperature reached room temperature. 3) The mixture of 1) and 2) was saturated for 12 hours and then exchanged with Ammonium chloride (NH 4 Cl). (The reaction was stopped by adding a saturated aqueous solution of ammonia chloride.) 4) This was purified on a silica gel column with hexane and ethylacetate solvent to obtain 13.5 g (yield 80%) of the product.
도 1의 B는 acetylene을 E-ethylene으로 환원시키기 위한 환원제로 LiAlH4과 같은 Rochelle salt를 혼합하는 과정을 나타낸다. 1) 2g의 리튬 알루미늄 하이드 라이드(Lithium aluminium hydride: LiAlH4)를, THF (100ml)을 안전을 위해 천천히 넣으며 혼합액 에머전이 없어질 때까지 혼합한다. 이후, 상기에서 형성된 13.5g의 2-Methyl-5-phenylpentan-2-ol을 혼합하고 12시간 교반하였다. 2) 0℃에서로 냉각하고 황산나트륨 (Sodium sulfate: Na2SO4)을 혼합하고 30분간 교반하였다. 3) 미세한 입자를 제거하기 위하여 Celiteㄾ filter로 여과하였다. 4) 이를 hexane과 ethylacetate 용매으로 실리카겔 컬럼상으로 정제하여 10.5g (수율 70%)의 생성물을 얻었다.1B shows a process of mixing a Rochelle salt such as LiAlH4 as a reducing agent for reducing acetylene to E-ethylene. 1) Add 2g of lithium aluminum hydride (LiAlH4) and THF (100ml) slowly for safety and mix until emulsion of the mixed solution disappears. Then, 13.5 g of 2-Methyl-5-phenylpentan-2-ol formed above was mixed and stirred for 12 hours. 2) After cooling to 0°C, sodium sulfate (Na2SO4) was mixed and stirred for 30 minutes. 3) Filtered with Celite ㄾ filter to remove fine particles. 4) This was purified on a silica gel column with hexane and ethylacetate solvent to obtain 10.5 g (yield 70%) of the product.
도 1의 C는 알코올의 선택 산화반응하여 알데하이드의 생성하는 방법을 나타낸다. 1) 상기 실시단계 2의 수득합성물 10.5g을 5ml의 DCM에 이산화망간 (MnO2) 5.75g 혼합물을 첨가하였다. 2) 반응의 완료 후, 생성물을 Celiteㄾ filter 로 여과하고 DCM으로 세척하여 7.40g (수율 79%)을 얻었다.1C shows a method for producing an aldehyde by the selective oxidation reaction of an alcohol. 1) A mixture of 5.75 g of manganese dioxide (MnO 2 ) was added to 10.5 g of the compound obtained in Example 2 above in 5 ml of DCM. 2) After completion of the reaction, the product was filtered through a Celite® filter and washed with DCM to obtain 7.40 g (yield 79%).
도 1의 D는 합성된 상기의 C15 Aldaehyde에 Phosphonium ylides로 C18 hydroxy ester를 합성하는 방법을 나타낸다. 1) 상기 실시단계 3의 수득물 7.0g을 10ml의 benzene에 용해시키고 Phosphonium ylides 24g을 첨가하고 1시간동안 반응 시겼다. 2) 교반된 용매는 진공으로 제거하여 HPLC 검사 상으로 6.50 g의 hydroxy ester (75%)를 수득하였다. 1D shows a method of synthesizing C 18 hydroxy ester with Phosphonium ylides in the synthesized C 15 Aldaehyde. 1) 7.0 g of the product obtained in Step 3 was dissolved in 10 ml of benzene, 24 g of Phosphonium ylides was added, and the reaction was allowed to proceed for 1 hour. 2) The stirred solvent was removed in vacuo to obtain 6.50 g of hydroxy ester (75%) by HPLC.
도 1의 E는 alcohol을 HCOOH 산으로 탈수하여 ethylene을 형성하는 반응을 나타낸다. 헥산에 녹아 있는 상기의 hydroxy ester 용액 6.50 g에 80% formic acid 0.4 ml를 첨가하고. 상온에서 12시간 교반하여 3.9g을 (수율 69%) 얻었다.1E shows a reaction in which alcohol is dehydrated with HCOOH acid to form ethylene. Add 0.4 ml of 80% formic acid to 6.50 g of the above hydroxy ester solution dissolved in hexane. After stirring at room temperature for 12 hours, 3.9 g (yield 69%) was obtained.
도 1의 F는 Rochelle salt를 혼합하고, 환원을 위한 환원제로서 THF를 이용하여 C17 알코올을 합성하는 방법을 나타낸다. 1) 0.48g의 리튬 알루미늄 하이드 라이드(Lithium aluminium hydride: LiAlH4)를 THF (25ml)에 안전을 위해 천천히 넣으며 혼합액 에머전이 없어질 때까지 혼합한다. 완료 후, 상기에서 형성된 3.5g의 ester에 혼합하고 12시간 교반하였다. 2) 0℃에서로 냉각하고 황산 나트륨 (Sodium sulfate: Na2SO4)을 혼합하고 30분간 교반하였다. 3) 미세한 입자를 제거하기 위하여 Celite filter 로 여과하였다. 4) 이를 hexane과 ethylacetate 용매으로 실리카겔 컬럼상으로 정제하여 2.19g (수율 70%)의 생성물을 얻었다.1F shows a method of synthesizing C 17 alcohol by mixing Rochelle salt and using THF as a reducing agent for reduction. 1) Slowly add 0.48 g of lithium aluminum hydride (LiAlH4) to THF (25ml) for safety and mix until emulsion of the mixed solution disappears. After completion, it was mixed with 3.5 g of the ester formed above and stirred for 12 hours. 2) After cooling to 0°C, sodium sulfate (Na2SO4) was mixed and stirred for 30 minutes. 3) Filtered with Celite filter to remove fine particles. 4) This was purified on a silica gel column with hexane and ethylacetate solvent to obtain a product of 2.19g (yield 70%).
도 1의 G는 C17 알코올의 선택 산화반응하여 Aldehyde의 생성하는 방법을 나타낸다. 1) 상기 수득물 1.50g에 30ml의 DCM에 0.58g의 MnO2를 첨가 하여 실온에서 30분 동안 교반 하였다. 2) 반응 완료 후, 생성물을 Celiteㄾ filter를 통해 여과하고 Celite filter를 DCM으로 세척하였다. 용매를 감압 제거하고 화합물 1.10 g (수율 74 %)을 HPLC로 확인하였다.1G shows a method for producing Aldehyde by selective oxidation of C 17 alcohol. 1) To 1.50 g of the obtained product, 0.58 g of MnO 2 was added to 30 ml of DCM, and the mixture was stirred at room temperature for 30 minutes. 2) After completion of the reaction, the product was filtered through a Celite filter, and the Celite filter was washed with DCM. The solvent was removed under reduced pressure, and the compound 1.10 g (yield 74%) was confirmed by HPLC.
도 1의 H는 Grignard 반응을 통해 Ketone을 Methyl기로 알킬화하는 반응을 나타낸다. 1) 0℃에서 20ml THF 중 1.10g의 상기 알데히드의 교반 된 용액에 0.5ml의 Methylmagnesium bromide (MeMgBr)을 첨가 하였다. 용액을 0℃에서 30분 동안 교반 하였다. 2) 반응의 완료 후, NHCl의 포화 용액으로 켄칭하고 에테르로 추출 하였다. 추출한 에테르 층을 물 및 염수 용액으로 세척하고 무수 황산 나트륨(NaSO4)상에서 건조시켰다. 진공으로 용매를 제거하고, 크로마토그래피 정제 화합물을 55% 수율로 수득하였다.1H shows the reaction of alkylating ketone with methyl group through Grignard reaction. 1) To a stirred solution of 1.10 g of the above aldehyde in 20 ml THF at 0 °C was added 0.5 ml of Methylmagnesium bromide (MeMgBr). The solution was stirred at 0 °C for 30 min. 2) After completion of the reaction, quenched with a saturated solution of NHCl and extracted with ether. The extracted ether layer was washed with water and brine solution and dried over anhydrous sodium sulfate (NaSO4). The solvent was removed in vacuo, and the chromatographically purified compound was obtained in 55% yield.
도 1의 I는 Hydro Oxidation반응을 유도하는 과정을 나타낸다. 1) 20ml의 DCM 중 0.50g의 상기 추출물을 넣고 0.18g의 MnO2를 첨가하고 혼합물을 실온에서 교반 하였다. 반응 완료 후, 생성물을 Celite filter를 통해 여과하였다. 2) DCM으로 세척하였다. 용매를 진공하에 제거하고 크로마토그래피 정제후 순수한 화합물 0.39g (79%)을 수득하였다. I of FIG. 1 shows the process of inducing the Hydro Oxidation reaction. 1) Add 0.50 g of the above extract in 20 ml of DCM, add 0.18 g of MnO 2 , and stir the mixture at room temperature. After completion of the reaction, the product was filtered through a Celite filter. 2) Washed with DCM. The solvent was removed in vacuo and 0.39 g (79%) of the pure compound was obtained after chromatographic purification.
도 1의 J는 Aldehyde 또는 ketone을 RO group으로 C=C 커플링 반응하는 과정을 나타낸다. 1) 20ml의 THF에 4mg 수소화나트륨 (NaH)의 50% 분산액의 현탁액에 0.14ml의 Methyl diethylphosphonoacetate 를 첨가하고, 반응물이 냉각되고 깨끗해질 때까지 교반 하였다. 2) THF 중 1g의 케톤을 적가하고, 반응이 실온에서 완료 될 때까지 반응을 교반하였다. 과량의 NaH를 물로 켄 칭하고 반응 혼합물을 에테르로 추출 하였다. 에테르 층을 물, 염수 용액으로 세척하였다. 3) 무수 Na2SO4상에서 건조시켰다. 용매를 감압 하에서 증류 제거하고 크로마토 그래피 정제로 메틸 레티노 에이트(0.88g 수율 70%)수득하였다.1 J shows the process of C = C coupling reaction of Aldehyde or ketone as an RO group. 1) To a suspension of a 50% dispersion of 4 mg sodium hydride (NaH) in 20 ml of THF, 0.14 ml of methyl diethylphosphonoacetate was added, and the reaction mixture was stirred until cooled and clear. 2) 1 g of ketone in THF was added dropwise, and the reaction was stirred until the reaction was completed at room temperature. The excess NaH was quenched with water and the reaction mixture was extracted with ether. The ether layer was washed with water, brine solution. 3) dried over anhydrous Na2SO4. The solvent was distilled off under reduced pressure, and methyl retinoate (0.88 g, 70% yield) was obtained by chromatographic purification.
도 1의 K는 Ester기를 LiAlH4 환원제로 환원하여 Alcohol기를 얻는 방법을 나타낸다. 1) 0.106g의 리튬 알루미늄 하이드 라이드(Lithium aluminium hydride: LiAlH4)를 THF (45ml)에 혼합하고 상기에서 형성된 0.88g의 ester를 혼합하고 12시간 교반하였다. 2) 0℃에서로 냉각하고 황산 나트륨 (Sodium sulfate: Na2SO4)을 혼합하고 30분간 교반하였다. 3) 미세한 입자를 제거하기 위하여 Celiteㄾ filter 로 여과하였다. 4) 이를 hexane과 ethylacetate 용매으로 실리카겔 컬럼상으로 정제하여 0.56g 9-cis-retinol (수율 70%)의 생성물을 얻었다.1K shows a method for obtaining an alcohol group by reducing the ester group with a LiAlH4 reducing agent. 1) 0.106 g of lithium aluminum hydride (LiAlH4) was mixed with THF (45 ml), 0.88 g of the ester formed above was mixed, and the mixture was stirred for 12 hours. 2) After cooling to 0°C, sodium sulfate (Na2SO4) was mixed and stirred for 30 minutes. 3) Filtered with Celite ㄾ filter to remove fine particles. 4) This was purified on a silica gel column with hexane and ethylacetate solvent to obtain a product of 0.56 g 9-cis-retinol (yield 70%).
도 1의 L은 Alcohol기를 Phosphonium salt로 치환하는 반응을 나타낸다. 1) 상위 0.56g 9-cis-retinol을 2.5mL Methanol에 용해시킨 용액에 0.812g PPh3HBr을 Methanol에 녹인 용액을 떨어뜨린다. 2) 혼합용액을 실온, Argon 충진 하에 1시간 교반한다. 3) 회전 진공기로 용매를 제거한다. 4) 25mL hexane으로 부산물을 5-6번 세척한다. phosphonium salt 0.86g (수율 70%)를 얻었다.L in FIG. 1 represents a reaction for replacing an alcohol group with a phosphonium salt. 1) Drop a solution of 0.812 g PPh3HBr in methanol to a solution of 0.56 g 9-cis-retinol dissolved in 2.5 mL methanol. 2) Stir the mixed solution for 1 hour at room temperature under Argon filling. 3) Remove the solvent with a rotary vacuum. 4) Wash the by-products 5-6 times with 25mL hexane. 0.86 g of phosphonium salt (yield 70%) was obtained.
도 1의 M은 β-C15 aldehyde와 3-Methyl-2-butenal을 Knoevenagel condensation의 반응을 유도하여 all-trans retinal을 합성하는 단계를 나타낸다. 1) 3-Methyl-2-butenal 0.31g을 물 8mL에 녹인 용액에 β-C15 aldehyde 0.12g를 빠르게 첨가하고 실온에서 교반한다. 2) 5분 후 생성된 고체를 거르고 건조한다. all trans retinal 0.39g (수율 95%)를 얻었다. M in FIG. 1 shows the step of synthesizing all-trans retinal by inducing a reaction of Knoevenagel condensation between β-C15 aldehyde and 3-Methyl-2-butenal. 1) To a solution of 0.31 g of 3-Methyl-2-butenal in 8 mL of water, quickly add 0.12 g of β-C15 aldehyde and stir at room temperature. 2) After 5 minutes, filter the resulting solid and dry it. 0.39 g (yield 95%) of all trans retinal was obtained.
I. Potassium all-trans retinoate 및 Potassium 9-cis retinoate 합성 및 분석I. Synthesis and analysis of Potassium all-trans retinoate and Potassium 9-cis retinoate
1. all-trans retinoic acid 합성단계1. All-trans retinoic acid synthesis step
도 2는 all-trans retinoic acid 합성단계를 나타낸다. 본 발명의 all-trans retinoic acid의 합성은 도 1과 같이 합성된 all-trans retinal을 Methanol에 용해한 0.25M 용액을 준비하고 이에 1 당량의 Na2PO4와 KMnO4을 멸균증류수(DW)에 녹인 0.25M 용액을 혼합하여 상온에서 30분간 교반 한다. all-trans retinoic acid의 결정화(Crystallization)는 IPA(isopropyl alcohol, isopropanol)에 60~70℃에서 녹인 후, 0~5℃로 서서히 냉각하여 결정화하고 결정을 여과하여 건조 후 보관한다.Figure 2 shows the all-trans retinoic acid synthesis step. For the synthesis of all-trans retinoic acid of the present invention, a 0.25 M solution of all-trans retinal synthesized as shown in FIG. 1 was prepared in methanol, and 1 equivalent of Na2PO4 and KMnO4 were dissolved in sterile distilled water (DW) to prepare a 0.25M solution. Mix and stir at room temperature for 30 minutes. For crystallization of all-trans retinoic acid, it is dissolved in IPA (isopropyl alcohol, isopropanol) at 60~70℃, cooled slowly to 0~5℃ to crystallize, and the crystals are filtered and dried before storage.
2. 9-cis retinoic acid의 합성단계2. Synthesis of 9-cis retinoic acid
도 3은 9-cis retinoic acid의 합성단계를 나타낸다. 9-cis retinoic acid의 합성은 EtOH (80mL)에 Methyl b-formylcrotonate을 넣고 KOH 50% 수용액을 20분 동안 첨가하여 0~5℃에서 유지한다. 그리고 9-cis phosphonium chloride 38.8% 에탄올 용액을 20분 동안 첨가하고 0~5℃에서 유지 후, KOH 50% 수용액을 20분 동안 첨가하고 추가로 0~5℃에서 반응을 유지한다. Figure 3 shows the synthesis step of 9-cis retinoic acid. For the synthesis of 9-cis retinoic acid, methyl b-formylcrotonate is added to EtOH (80 mL), and 50% KOH aqueous solution is added for 20 minutes, and maintained at 0-5°C. And after adding 9-cis phosphonium chloride 38.8% ethanol solution for 20 minutes and maintaining it at 0-5 ℃, KOH 50% aqueous solution is added for 20 minutes, and the reaction is further maintained at 0-5 ℃.
이후, 멸균증류수(DW)를 첨가하여 주황색 현탁액이 투명한 주황색을 형성하는 약 10분 동안 교반 후 다시 DW와 MC를 2:1로 혼합하여 주입하고 10분간 교반 한다. 이후 MC로 약 3회에 거처 추출한다. MC층 용액을 여과 후 진공 건조하고 MeOH을 첨가하여 0~5℃에서 2시간 교반 후 여과한다. 결정화(Crystallization)는 상기와 같이 IPA(isopropyl alcohol, isopropanol)에 60~70℃에서 녹인 후, 0~5℃로 서서히 냉각하여 결정화하고 여과하여 건조 후 보관한다.Thereafter, sterile distilled water (DW) is added and the orange suspension is stirred for about 10 minutes to form a transparent orange, and then DW and MC are mixed 2:1 again and injected, and stirred for 10 minutes. After that, it is extracted about 3 times with MC. The MC layer solution is filtered, dried under vacuum, added with MeOH, stirred at 0-5° C. for 2 hours, and filtered. Crystallization (Crystallization) is dissolved in IPA (isopropyl alcohol, isopropanol) at 60 ~ 70 ℃ as described above, then slowly cooled to 0 ~ 5 ℃ to crystallize, filter, and store after drying.
3. Potassium all-trans retinoate 및 Potassium 9-cis retinoate 합성단계3. Potassium all-trans retinoate and Potassium 9-cis retinoate synthesis step
도 4는 본 발명의 합성에 따라 얻어진 Potassium all-trans retinoate를 나타내고, 도 5는 Potassium 9-cis retinoate를 나타낸다. 상기 all-trans retinoic acid 합성단계와 9-cis retinoic acid의 합성단계에서 얻어진 all-trans retinoic acid와 9-cis retinoic acid 각각에 대하여 Hexane 첨가 후 내부 온도를 상온에서 40℃로 승온시킨다. 이후, KOH를 소량의 D.W에 용해시켜 천천히 적가한 후, 온도를 유지한 상태에서 5분간 교반 시킨고 반응이 종료 후 액상을 제거하고 침전물을 건조하여, 도 4 내지 도 5와 같이 2 종류의 Potassium retinoate를 얻었다. 4 shows Potassium all-trans retinoate obtained according to the synthesis of the present invention, and FIG. 5 shows Potassium 9-cis retinoate. After adding hexane to each of all-trans retinoic acid and 9-cis retinoic acid obtained in the all-trans retinoic acid synthesis step and the 9-cis retinoic acid synthesis step, the internal temperature was raised from room temperature to 40°C. After that, KOH was dissolved in a small amount of D.W and slowly added dropwise, stirred for 5 minutes while maintaining the temperature, and after the reaction was completed, the liquid phase was removed and the precipitate was dried, as shown in FIGS. 4 to 5, two types of Potassium retinoate was obtained.
또한, 심혈관치료용 약학적 조성물 Potassium all-trans retinoate 및 Potassium 9-cis retinoate는 Tretinoin 및 Alitretinoin으로 공지된 All-trans retinoic acid와 9-cis retinoic acid를 전구체로 사용하여 합성할 수 있다. In addition, the pharmaceutical compositions for cardiovascular treatment Potassium all-trans retinoate and Potassium 9-cis retinoate can be synthesized using all-trans retinoic acid and 9-cis retinoic acid known as Tretinoin and Alitretinoin as precursors.
Tretinoin (All-trans retinoic acid)은 급성 전골수성 백혈병 (Acute Myeloid Leukemia: 미분화 골수모구성, 미성숙 골수모구성, 성숙 골수모구성 , 골수구단핵구성, 단핵구성, 거핵모구성 및 적백혈병) 치료제로 1일 1회 30 - 52mg/m2로 조절가능하도록 처방하며, 혈관내 응고질환(DIC)과 같은 출혈경향을 억제하는 치료제로 사용되고 있다. Tretinoin (All-trans retinoic acid) is a treatment for acute promyeloid leukemia (undifferentiated myeloid leukemia, immature myeloblastic, mature myeloblastic, myelocytic monocytic, monocytic, megakaryotic and erythroleukemia). It is prescribed to be adjustable at 30 - 52 mg/m2 once a day, and is used as a treatment for suppressing bleeding tendencies such as intravascular coagulation disease (DIC).
Alitretinoin (9-cis retinoic acid)은 중증 만성 손 습진 (severe/recalcitrant chronic hand eczema) 치료제로 알려져 있다. 근 효능 및 효과는 최소 4주간의 강력한 국소 스테로이드치료에도 반응하지 않는 성인의 만성중증손습진 (PGA(physician's global assessment)환자에게 1일 1회 10 - 30mg을 식사와 함께 또는 식사 직후 복용하도록 처방된다. Alitretinoin (9-cis retinoic acid) is known to treat severe/recalcitrant chronic hand eczema. For muscle efficacy and effectiveness, it is prescribed for adults with chronic severe hand eczema (PGA) who do not respond to strong topical steroid therapy for at least 4 weeks, to take 10 - 30 mg once a day with or immediately after a meal.
이하, 상기 단계로부터 수득한 Potassium all-trans retinoate 및 Potassium 9-cis retinoate의 순도 및 수율을 ① IR, ② 1H-NMR, ③ UV-VIS spectrophotometer을 통한 분석으로 확인하였다.Hereinafter, the purity and yield of Potassium all-trans retinoate and Potassium 9-cis retinoate obtained from the above steps were confirmed by analysis through ① IR, ② 1 H-NMR, and ③ UV-VIS spectrophotometer.
<실험예 1> Potassium all-trans retinoate 순도 및 수율 확인<Experimental Example 1> Potassium all-trans retinoate purity and yield confirmation
본 발명의 단계에 따라 수득한 Potassium all-trans retinoate의 순도 및 수율을 확인하기 위해 ① IR, ② 1H-NMR, ③ UV-VIS spectrophotometer 분석을 실시하였다. In order to confirm the purity and yield of the Potassium all-trans retinoate obtained according to the steps of the present invention, ① IR, ② 1 H-NMR, ③ UV-VIS spectrophotometer analysis was performed.
도 6은 본 발명의 실험예 1에 따른 IR 분석결과를 나타낸다. Thermo 社의 iS50 ATR 장비로 고체 상태에서 분석한 결과 1400cm-1에서 뚜렷한 대칭 stretch와 1600cm-1에서 비대칭의 강한 stretch가 나타났다. 이는 All trans retinoic acid의 carboxylic acid 작용기가 caboxylate salt로 치환되었음을 의미하며 또한, 1700cm-1 부근에서 시약 All trans retinoic acid에 비해 상당히 낮아진 stretch가 확인되었다. 이는 출발 물질과는 확연하게 다른 결합의 성질을 갖는 것을 의미한다. 6 shows an IR analysis result according to Experimental Example 1 of the present invention. As a result of analysis in the solid state with Thermo's iS50 ATR equipment, a clear symmetric stretch at 1400 cm -1 and a strong asymmetric stretch at 1600 cm -1 were found. This means that the carboxylic acid functional group of All trans retinoic acid was substituted with the caboxylate salt. Also, a significantly lower stretch was confirmed in the vicinity of 1700 cm -1 compared to the reagent All trans retinoic acid. This means that it has a property of a bond that is significantly different from that of the starting material.
도 7은 본 발명의 실험예 1에 따른 1H-NMR 결과를 나타낸다. Bruker 社의 500MHz NMR 장비를 사용하였으며, NMR solvent는 출발 물질 (All trans retinoic acid) 과 합성 물질 (Potassium all trans retinoate)에 동일하게 DMSO를 적용하였다. NMR spectrum 상의 peak 위 a~n 표기는 분석 자료 좌측 상단에 그려진 각 물질구조의 a~n에 해당하는 수소를 의미하며, ATRA와 PATRA의 1H-NMR Spectrum을 비교해 보면 ATRA의 패턴은 유지되면서 노란색으로 표시한 부분이 우측으로 Shifting 된 현상을 관찰할 수 있다. 이는 ATRA의 -OH가 O- K+로 치환되면서 나타나는 전자의 쏠림 현상을 의미한다.7 shows 1 H-NMR results according to Experimental Example 1 of the present invention. Bruker's 500MHz NMR equipment was used, and as the NMR solvent, DMSO was applied to the starting material (All trans retinoic acid) and the synthetic material (Potassium all trans retinoate). A~n above the peak on the NMR spectrum means hydrogen corresponding to a~n of each material structure drawn on the upper left of the analysis data. Comparing 1 H-NMR spectrum of ATRA and PATRA, ATRA pattern is maintained while yellow It can be observed that the part marked with is shifted to the right. This means that electrons are concentrated when -OH of ATRA is substituted with O - K + .
도 8은 본 발명의 실험예 1에 따른 UV-VIS spectrophotometer 분석결과를 나타낸다. Scinco 社의 S-3100 장비 및 PerkinElmer 社의 Lambda 365 장비 (농도별)를 사용하여 물에 용해한 PATRA 합성물을 일회용 plastic cell에 담아 UV-VIS spectrophotometer를 측정하였으며, 분석 결과 All trans retinoic acid가 흡수하는 UV 파장 영역대 (300-400nm)에서 유사한 패턴의 Spectrum 결과를 보였다. 이러한 결과를 통해 Potassium의 결합으로 물에 용해하는 성질을 가지면서도 기본 Retinoic acid 구조상의 변형이 일어나지 않았음을 확인할 수 있다. (200nm에서 나타나는 noise peak는 일회용 plastic cell에 의해 발생하는 것으로 무시함)8 shows the results of UV-VIS spectrophotometer analysis according to Experimental Example 1 of the present invention. Using Scinco's S-3100 equipment and PerkinElmer's Lambda 365 equipment (by concentration), the PATRA compound dissolved in water was placed in a disposable plastic cell and UV-VIS spectrophotometer was measured. As a result of the analysis, UV absorbed by all trans retinoic acid Spectrum results of similar patterns were shown in the wavelength range (300-400nm). Through these results, it can be confirmed that the basic retinoic acid structure did not change while having the property of dissolving in water due to the binding of potassium. (The noise peak at 200nm is generated by the disposable plastic cell and is ignored)
또한, PATRA 합성물의 농도 범위를 15ppm - 30ppm 단위로 설정하여 5ppm 간격으로 UV-VIS Spectrophotometer를 측정하였고, 해당 결과값을 통해 신뢰도 (R2) 0.9925 값 (1에 가까울수록 높은 신뢰도)의 검량선을 그렸다. 이는 추후, 합성하는 물질의 순도 측정에 활용된다. UV-VIS spectrophotometer ; 250nm-450nm 영역대에서 흡광도 곡선을 나타내며 파장대 340nm에서 가장 높은 흡광도 값을 보였다.In addition, the concentration range of the PATRA compound was set in units of 15ppm - 30ppm, and UV-VIS Spectrophotometer was measured at 5ppm intervals, and a calibration curve with reliability (R 2 ) 0.9925 value (closer to 1, higher reliability) was drawn through the result. . This is later used to measure the purity of the material to be synthesized. UV-VIS spectrophotometer; The absorbance curve was shown in the 250nm-450nm region, and the highest absorbance value was shown in the wavelength band 340nm.
<실험예 2> Potassium 9-cis retinoate 순도 및 수율 확인<Experimental Example 2> Potassium 9-cis retinoate purity and yield confirmation
본 발명의 단계에 따라 수득한 Potassium 9-cis retinoate의 순도 및 수율을 확인하기 위해 ① IR, ② 1H-NMR, ③ UV-VIS spectrophotometer 분석을 실시하였다. In order to confirm the purity and yield of the Potassium 9-cis retinoate obtained according to the steps of the present invention, ① IR, ② 1 H-NMR, ③ UV-VIS spectrophotometer analysis was performed.
도 9는 본 발명의 실험예 1에 따른 IR 분석결과를 나타낸다. Thermo 社의 iS50 ATR 장비로 고체 상태에서 분석한 결과 1400cm-1에서 뚜렷한 대칭 stretch와 1600cm-1에서 비대칭의 강한 stretch가 나타낸다. 이는 9-cis retinoic acid의 carboxylic acid 작용기가 caboxylate salt로 치환되었음을 의미하며 또한, 1700cm-1 부근에서 시약 9-cis retinoic acid에 비해 상당히 낮아진 stretch가 확인되었다. 이는 출발 물질과는 확연하게 다른 결합의 성질을 갖는 것을 의미한다. 9 shows an IR analysis result according to Experimental Example 1 of the present invention. As a result of analysis in the solid state with Thermo's iS50 ATR equipment, a clear symmetric stretch at 1400 cm -1 and a strong asymmetric stretch at 1600 cm -1 are shown. This means that the carboxylic acid functional group of 9-cis retinoic acid was substituted with the caboxylate salt, and a significantly lowered stretch was confirmed in the vicinity of 1700 cm -1 compared to the reagent 9-cis retinoic acid. This means that it has a property of a bond that is significantly different from that of the starting material.
도 10은 본 발명의 실험예 1에 따른 1H-NMR 결과를 나타낸다. Bruker 社의 500MHz NMR 장비를 사용하였으며, NMR solvent는 출발 물질 (9-cis retinoic acid) 과 합성 물질 (Potassium 9-cis retinoate)에 동일하게 DMSO를 적용하였다. NMR spectrum 상의 peak 위 a~n 표기는 분석 자료 좌측 상단에 그려진 각 물질구조의 a~n에 해당하는 수소를 의미한다. 9CRA와 P9CRA의 1H-NMR Spectrum을 비교해 보면 9CRA의 패턴은 유지되면서 노란색으로 표시한 부분이 우측으로 Shifting 된 현상을 관찰할 수 있다. 이는 ATRA의 -OH가 O- K+로 치환되면서 나타나는 전자의 쏠림 현상을 의미한다.10 shows 1 H-NMR results according to Experimental Example 1 of the present invention. Bruker's 500MHz NMR equipment was used, and as the NMR solvent, DMSO was applied to the starting material (9-cis retinoic acid) and the synthetic material (Potassium 9-cis retinoate) in the same way. A~n above the peak on the NMR spectrum means hydrogen corresponding to a~n of each material structure drawn on the upper left of the analysis data. Comparing the 1 H-NMR spectrum of 9CRA and P9CRA, it can be observed that the pattern of 9CRA is maintained while the part marked in yellow is shifted to the right. This means that electrons are concentrated when -OH of ATRA is substituted with O - K + .
도 11은 본 발명의 실험예 1에 따른 UV-VIS spectrophotometer 분석결과를 나타낸다. PerkinElmer 社의 Lambda 365 장비를 사용하여 물에 용해한 P9CRA 합성물을 일회용 plastic cell에 담아 UV-VIS spectrophotometer를 측정하였으며, 분석 결과 9-cis retinoic acid가 흡수하는 UV 파장 영역대 (300-400nm)에서 유사한 패턴의 Spectrum 결과를 보인다. 이러한 결과를 통해 Potassium의 결합으로 물에 용해하는 성질을 가지면서도 기본 9-cis retinoic acid 구조상의 변형이 일어나지 않았음을 확인할 수 있다.11 shows the results of UV-VIS spectrophotometer analysis according to Experimental Example 1 of the present invention. Using PerkinElmer's Lambda 365 equipment, the P9CRA compound dissolved in water was placed in a disposable plastic cell and UV-VIS spectrophotometer was measured. As a result of the analysis, a similar pattern was observed in the UV wavelength band (300-400 nm) absorbed by 9-cis retinoic acid. Spectrum results are shown. Through these results, it can be confirmed that the basic 9-cis retinoic acid structure did not change while having the property of dissolving in water due to the binding of Potassium.
또한, P9CRA 합성물의 농도 범위를 20ppm ~ 35ppm 단위로 설정하여 5ppm 간격으로 UV-VIS Spectrophotometer를 측정하였고, 해당 결과값을 통해 신뢰도 (R2) 0.9941 값 (1에 가까울수록 높은 신뢰도)의 검량선을 그렸다. 이는 추후, 합성하는 물질의 순도 측정에 활용된다. UV-VIS spectrophotometer : 290nm-400nm 영역대에서 흡광도 곡선을 나타내며 파장대 337nm에서 가장 높은 흡광도 값을 보였다. In addition, the concentration range of the P9CRA compound was set in units of 20ppm to 35ppm, and UV-VIS Spectrophotometer was measured at 5ppm intervals, and a calibration curve of reliability (R 2 ) 0.9941 value (closer to 1, higher reliability) was drawn through the result. . This is later used to measure the purity of the material to be synthesized. UV-VIS spectrophotometer: Absorbance curve was shown in the 290nm-400nm region, and the highest absorbance value was shown in the wavelength band 337nm.
I. Potassium all-trans retinoate 및 Potassium 9-cis retinoate의 효능 평가I. Efficacy evaluation of Potassium all-trans retinoate and Potassium 9-cis retinoate
Alitretinoin과 Tretinoin을 전구체로 심혈관치료에 작용할 수 있는 원료제형을 추가로 합성해 완성된 Potassium all-trans retinoate 및 Potassium 9-cis retinoate 형태의 합성물에 대한 새로운 작용기전 확립과 효능을 평가하기 위해 심혈관질환관련 작용기전을 NGS 시험 및 분석을 통해 pathway를 확인하였다. In order to establish a new mechanism of action and evaluate the efficacy of the Potassium all-trans retinoate and Potassium 9-cis retinoate type compounds completed by further synthesizing raw materials that can act on cardiovascular treatment using alitretinoin and Tretinoin as precursors, cardiovascular disease-related The pathway was confirmed through NGS test and analysis of the mechanism of action.
또한, 물성의 화학적 및 생물학적 특성을 분석자료를 기초로 하여 혈액과 혈관에 관련된 세포에 약물 적용량을 NTS Assay를 통해 심혈관치료제로서의 약물 적용량을 결정하였다.In addition, based on the analysis data of the chemical and biological properties of physical properties, the amount of drug applied to blood and blood vessels related cells was determined through NTS Assay to determine the amount of drug applied as a cardiovascular treatment agent.
혈관 세포에서의 약물의 유전자 반응을 확인하기 위하여 섬유아세포 (Fibroblast cells) 분화 평활근 세포 (Primary Human Intestinal Smooth Muscle Cells: ISMC)에 Potassium 9-cis-retinoate (P9CRA)를 적용하여 Next-Generation Sequencing (NGS)를 실시하고 Data를 분석하였다. Next-Generation Sequencing (NGS) by applying Potassium 9-cis-retinoate (P9CRA) to fibroblast cells and Primary Human Intestinal Smooth Muscle Cells (ISMC) to confirm the gene response of drugs in vascular cells ) and analyzed the data.
혈액 세포에서의 약물의 유전자 반응을 확인하기 위하여 단핵구 세포(THP-1 cells)에 Potassium All trans retinoate(PATRA)를 적용하여 Next-Generation Sequencing (NGS)를 실시하고 Data를 분석하였다.To confirm the gene response of the drug in blood cells, Potassium All trans retinoate (PATRA) was applied to mononuclear cells (THP-1 cells), Next-Generation Sequencing (NGS) was performed, and data were analyzed.
<실험예 1> Potassium all trans retinoate(PATRA) & Potassium 9-cis-retinoate(P9CRA)의 화학적 생물학적 안정성<Experimental Example 1> Chemical and biological stability of Potassium all trans retinoate (PATRA) & Potassium 9-cis-retinoate (P9CRA)
본 발명의 실시예 1은 In vitro 및 In vivo 시험으로 Potassium all trans retinoate(PATRA) & Potassium 9-cis-retinoate(P9CRA)의 화학적 생물학적 안정성을 진행하였다. 본 시험의 목적은 Potassium all trans retinoate(PATRA)와 Potassium 9-cis-retinoate(P9CRA)의 in vitro/in vivo ADME(흡분대배) 시험 및 평가이다. 이에 용해도 시험, 혈장 내 대사 안정성 시험, 간 마이크로 대사시험이 포함될 수 있다.In Example 1 of the present invention, the chemical and biological stability of Potassium all trans retinoate (PATRA) & Potassium 9-cis-retinoate (P9CRA) was performed in vitro and in vivo. The purpose of this study is to test and evaluate Potassium all trans retinoate (PATRA) and Potassium 9-cis-retinoate (P9CRA) in vitro/in vivo ADME. This may include solubility tests, plasma metabolic stability tests, and liver micrometabolism tests.
용해도 시험은 과량의 시험 약물을 1mL의 DDW 또는 인공위액 (SGF)가 담긴 test tube에 가하였고, Mixture를 상온에서 48시간 동안 shaking incubation 하였다. 평형 용해도에 도달한 후, test tube를 10분동안 3000 rpm으로 원심분리하였다. 상등액을 취한 후 주사기 필터를 사용하여 녹지 않은 시험 약물을 제거하였다. Filtrate를 테스트 튜브에 담고 분석하였다.For solubility test, an excess of the test drug was added to a test tube containing 1 mL of DDW or artificial gastric juice (SGF), and the mixture was shaken incubated at room temperature for 48 hours. After reaching equilibrium solubility, the test tube was centrifuged at 3000 rpm for 10 min. After taking the supernatant, the undissolved test drug was removed using a syringe filter. Filtrate was placed in a test tube and analyzed.
혈장내 대사 안정성 시험은 -20C 냉동고에 보관한 mouse plasma 와 rat plasma 그리고 human plasma을 해동하였다. 시험 약물의 최종 DMSO 농도는 1%미만으로 하였다. (최종 시험약물 농도는 20μM) (positive control로 procaine 약물을 사용) 시험 약물을 넣는 즉시 시험약물의 대사반응을 시작하고 0, 15, 30, 60, 120, 180, 240 분 샘플링하였다. (단, procaine 은 5, 10, 30, 60, 120 분 샘플링) 샘플 처리는 IS가 함유된 ice cold acetonitrile를 넣고 빠르게 voltexing을 30초간 하여 대사반응을 종료시켰다. 반응을 종료시킨 대사시험 샘플을 15분간 14000rpm의 조건으로 원심분리 하였다. 상등액을 분리하여 테스트 튜브에 담고 HPLC시스템으로 분석하였다.For the metabolic stability test in plasma, mouse plasma, rat plasma and human plasma stored in a -20C freezer were thawed. The final DMSO concentration of the test drug was less than 1%. (The final test drug concentration was 20 μM) (Procaine drug was used as a positive control) The metabolic reaction of the test drug was started immediately after the test drug was added, and samples were sampled for 0, 15, 30, 60, 120, 180, 240 minutes. (However, procaine is sampled for 5, 10, 30, 60, and 120 minutes) For sample treatment, ice cold acetonitrile containing IS was added and voltexing was performed for 30 seconds to terminate the metabolic reaction. The metabolic test sample after completion of the reaction was centrifuged at 14000 rpm for 15 minutes. The supernatant was separated, placed in a test tube, and analyzed by HPLC system.
간 마이크로좀 대사시험은 -80℃ 냉동고에 보관한 MLM, RLM, HLM fraction 을 해동하였다. NADPH와 대사시험용 버퍼에 분산시킨 MLM, RLM, HLM fraction을 5분간 preincubation를 한다 (1 mg/mL 마이크로좀 단백질 농도). 시험약물의 최종 DMSO농도는 1%미만으로 하였다 (최종농도는 20 μM). (필요시 positive control 로 buspirone등의 약물을 사용) 시험 약물을 넣는 즉시 시험 약물의 대사반응을 시작하고 0, 15, 30, 60, 120분 샘플링 하였다. 샘플 처리는 IS가 함유된 ice cold acetonitrile 를 넣고 빠르게 voltexing을 30초간 하여 대사반응을 종료시켰다. 반응을 종료시킨 대사시험 샘플을 15분간 14000rpm의 조건으로 원심분리 하였다. 상등액을 분리하여 테스트 튜브에 담고 HPLC 시스템으로 분석하였다.For liver microsome metabolism test, MLM, RLM, and HLM fractions stored in a -80℃ freezer were thawed. Preincubate the MLM, RLM, and HLM fractions dispersed in NADPH and metabolic test buffer for 5 minutes (1 mg/mL microsomal protein concentration). The final concentration of DMSO of the test drug was less than 1% (final concentration was 20 μM). (If necessary, use a drug such as buspirone as a positive control) The metabolic reaction of the test drug was started immediately after the test drug was added, and samples were sampled for 0, 15, 30, 60, and 120 minutes. For sample treatment, ice cold acetonitrile containing IS was added, and rapid voltexing was performed for 30 seconds to terminate the metabolic reaction. The metabolic test sample after completion of the reaction was centrifuged at 14000 rpm for 15 minutes. The supernatant was separated, placed in a test tube, and analyzed by HPLC system.
분석방법은 다음과 같다. 분석장비는 UPLC-DAD 장비 Agilent HPLC 1290 infinite II system를 사용하였다. HPLC 분석조건은 컬럼은 HECTOR-A C18 column (250 mm x 4.6 mm ID., 5 μm), 이동상은 FDDW (0.1% FA+5% acetic acid):ACN =30:70, Flow rate: 1 mL/min, Injection vol: 10 μL, Total run time: 30 min, Wavelength: 349 nm로 설정하였다.The analysis method is as follows. As the analysis equipment, UPLC-DAD equipment, Agilent HPLC 1290 infinite II system was used. HPLC analysis conditions were HECTOR-A C18 column (250 mm x 4.6 mm ID., 5 μm) for the column, FDDW (0.1% FA+5% acetic acid):ACN = 30:70 for the mobile phase, Flow rate: 1 mL/ min, Injection vol: 10 μL, Total run time: 30 min, Wavelength: 349 nm.
검량선은 시험물질에 대해서 최소한 5개 이상 농도 의 표준용액을 제조하고 앞서 기술한 전처리방법에 의하여 처리한 후 UHPL-DAD로 분석한 후 타겟 peak 면적으로 각 분석물질의 검량선을 작성하였다.For the calibration curve, a standard solution of at least 5 concentrations was prepared for the test substance, treated by the pretreatment method described above, and analyzed by UHPL-DAD.
평가방법은 다음과 같다. 용해도 시험으로 과량의 시험약물을 48시간 incubation 후 정량분석하였으며, 대사안정성시험은 혈장 (mouse, rat, human)과 간 마이크로좀 (mouse, rat, human)에서 시험약물의 대사안정성을 평가하였다. The evaluation method is as follows. As a solubility test, an excess of the test drug was quantitatively analyzed after incubation for 48 hours. The metabolic stability test evaluated the metabolic stability of the test drug in plasma (mouse, rat, human) and liver microsomes (mouse, rat, human).
시험결과는 다음과 같다. 하기의 표 1은 용해도 시험결과를 나타낸다. (n=3) P9CRA와 PATRA의 물에서의 equilibrium 용해도는 각각 3.76μg/mL과 1.18μg/mL로 측정되었으며 반면 인공위액에서의 용해도는 상대적으로 감소하여 각각 0.18μg/mL과 0.69μg/mL로 측정되었다. 즉, 시험의 의미를 통해 P9CRA와 PATRA 모두 물과 인공위액에서 용해되거가 파괴되는 현상을 보이지 않는다. The test results are as follows. Table 1 below shows the solubility test results. (n=3) The equilibrium solubility of P9CRA and PATRA in water was measured to be 3.76 μg/mL and 1.18 μg/mL, respectively, whereas their solubility in artificial gastric juice was relatively decreased to 0.18 μg/mL and 0.69 μg/mL, respectively. was measured. That is, through the meaning of the test, neither P9CRA nor PATRA was dissolved or destroyed in water and artificial gastric juice.
하기의 표 5 내지 표 7은 간 마이크로좀 대사 안정성 결과를 나타낸다. 간 마이크로좀 안정성에서 마우스에서는 P9CRA와 PATRA가 모두 유사한 안정성을 보여주었다 (30분에서의 %remaining 83.1% vs 83.4%). 렛트에서는 P9CRA 보다 PATRA가 좀 더 안정성이 우수하였으며 두 화합물 모두 안정하였다 (30분에서의 %remaining 78.3% vs 84.3%). 사람에서는 P9CRA의 간 마이크로좀 대사 안정성이 PATRA보다는 좋지 않고 P9CRA가 비교적 더 안정하였다 (30분에서의 %remaining 64.5% vs 86.7%).Tables 5 to 7 below show the results of liver microsome metabolic stability. In liver microsomal stability, both P9CRA and PATRA showed similar stability in mice (% remaining 83.1% vs 83.4% at 30 min). In rats, PATRA was more stable than P9CRA, and both compounds were stable (% remaining 78.3% vs 84.3% at 30 min). In humans, the liver microsomal metabolic stability of P9CRA was not as good as that of PATRA, and P9CRA was relatively more stable (% remaining 64.5% vs 86.7% at 30 min).
화합물compound |
용해도 in 증류수(DDW) (μg/mL)Solubility in distilled water (DDW) (μg/mL) |
용해도 in 인공위액 (SGF) (μg/mL)Solubility in Artificial Gastric Fluid (SGF) (μg/mL) |
P9CRAP9CRA | 3.76±1.083.76±1.08 | 0.18±0.110.18±0.11 |
PATRAPATRA | 1.18±0.52 1.18±0.52 | 0.69±0.170.69±0.17 |
하기의 표 2 내지 표 4는 혈장내 대사 안정성 시험결과를 나타낸다. 혈장에서의 안정성은 P9CRA와 PATRA 모두 전체적으로 종간 (mouse, rat, human) 차이 없이 대사적으로 매우 안정하였다. Tables 2 to 4 below show the results of the metabolic stability test in plasma. In terms of plasma stability, both P9CRA and PATRA were metabolically stable without any differences between species (mouse, rat, human).
시간 (분)time (minutes) | % remaining of P9CRA% remaining of P9CRA |
% remaining of PATRA% remaining of |
00 | 100.0±0.0100.0±0.0 | 100.0±0.0100.0±0.0 |
1515 | 101.5±4.2101.5±4.2 | 96.1±2.696.1±2.6 |
3030 | 98.9±1.898.9±1.8 | 94.4±3.194.4±3.1 |
6060 | 99.0±6.499.0±6.4 | 94.3±1.594.3±1.5 |
120120 | 101.2±8.3101.2±8.3 | 93.6±4.293.6±4.2 |
180180 | 92.2±3.692.2±3.6 | 93.6±1.393.6±1.3 |
240240 | 86.1±0.686.1±0.6 | 93.5±3.393.5±3.3 |
시간 (분)hours (minutes) | % remaining of P9CRA% remaining of P9CRA |
% remaining of PATRA% remaining of |
00 | 100.0±0.0 100.0±0.0 | 100.0±0.0 100.0±0.0 |
1515 | 100.7±1.1 100.7±1.1 | 100.4±2.0 100.4±2.0 |
3030 | 102.3±2.6 102.3±2.6 | 101.4±2.5 101.4±2.5 |
6060 | 101.3±1.3 101.3±1.3 | 101.0±2.2 101.0±2.2 |
120120 | 102.6±2.4 102.6±2.4 | 97.6±3.2 97.6±3.2 |
180180 | 99.8±2.8 99.8±2.8 | 99.3±3.2 99.3±3.2 |
240240 | 99.5±0.7 99.5±0.7 | 102.0±3.7 102.0±3.7 |
시간 (분)hours (minutes) | % remaining of P9CRA% remaining of P9CRA |
% remaining of PATRA% remaining of |
00 | 100.0±0.0 100.0±0.0 | 100.0±0.0 100.0±0.0 |
1515 | 101.4±1.5 101.4±1.5 | 106.4±4.8 106.4±4.8 |
3030 | 101.9±1.5 101.9±1.5 | 106.2±4.2 106.2±4.2 |
6060 | 103.4±1.7 103.4±1.7 | 106.2±4.3 106.2±4.3 |
120120 | 105.4±2.5 105.4±2.5 | 107.1±2.8 107.1±2.8 |
180180 | 103.4±1.5 103.4±1.5 | 104.7±2.7 104.7±2.7 |
240240 | 103.8±1.2 103.8±1.2 | 99.0±4.7 99.0±4.7 |
시간 (분) hours (minutes) | % remaining of P9CRA % remaining of P9CRA |
% remaining of PATRA% remaining of |
0 0 | 100.0±0.0 100.0±0.0 | 100.0±0.0 100.0±0.0 |
15 15 | 92.5±3.0 92.5±3.0 | 95.1±1.9 95.1±1.9 |
30 30 | 83.1±5.5 83.1±5.5 | 83.4±2.8 83.4±2.8 |
60 60 | 78.5±4.0 78.5±4.0 | 75.9±2.6 75.9±2.6 |
120 120 | 70.8±5.2 70.8±5.2 | 67.7±2.3 67.7±2.3 |
시간 (분) time (minutes) | % remaining of P9CRA % remaining of P9CRA |
% remaining of PATRA% remaining of |
0 0 | 100.0±0.0 100.0±0.0 | 100.0±0.0 100.0±0.0 |
15 15 | 84.0±3.4 84.0±3.4 | 88.4±5.3 88.4±5.3 |
30 30 | 78.3±2.7 78.3±2.7 | 84.3±7.8 84.3±7.8 |
60 60 | 67.6±4.0 67.6±4.0 | 73.5±3.7 73.5±3.7 |
120 120 | 58.5±2.8 58.5±2.8 | 67.3±4.0 67.3±4.0 |
시간 (분) hours (minutes) | % remaining of P9CRA % remaining of P9CRA |
% remaining of PATRA% remaining of |
0 0 | 100.0±0.0 100.0±0.0 | 100.0±0.0 100.0±0.0 |
15 15 | 80.0±7.5 80.0±7.5 | 90.7±1.8 90.7±1.8 |
30 30 | 64.4±5.0 64.4±5.0 | 86.7±1.5 86.7±1.5 |
60 60 | 48.7±0.9 48.7±0.9 | 79.3±3.3 79.3±3.3 |
120 120 | 39.6±1.2 39.6±1.2 | 73.9±7.2 73.9±7.2 |
<실험예 2> Fibroblast cells 분화 ISMC 및 Potassium 9-cis-retinoate(P9CRA) 적용 NGS <Experimental Example 2> Fibroblast cell differentiation ISMC and Potassium 9-cis-retinoate (P9CRA) applied NGS
먼저 Fibroblast cells을 5 x 105 개수 만큼 counting 후 1% FBS, 10ng/ml TGF-beta 1이 포함된 fibroblast media 와 섞은 후 type IV collagen이 coating된 T-75 flask에 뿌려주고 5% CO2 incubator에서 약 3일 정도 분화시킨다. 분화는 Primary Human Intestinal Smooth Muscle Cells(ISMC)을 1 x 106 개수만큼 T-75 flask에 배양시키고, 5% CO2 incubator에서 overnight 시켰다.First, count 5 x 10 5 fibroblast cells, mix them with fibroblast media containing 1% FBS and 10ng/ml TGF-beta 1, and spray them in a T-75 flask coated with type IV collagen, and then in a 5% CO 2 incubator. Differentiate for about 3 days. For differentiation, 1 x 10 6 Primary Human Intestinal Smooth Muscle Cells (ISMC) were cultured in a T-75 flask, and incubated overnight in a 5% CO 2 incubator.
9-cis-retinoate(P9CRA)를 세포독성이 없는 농도를 확인하기 위하여 도 12에 도시된 MTS Assay로 확인하여 최적농도가 1.25uM이 되도록 cell에 뿌려주었다. 5% CO2 incubator에서 24시간 배양하고 이후 RNA isolation을 위해 trizol reagent 1ml을 75T-flask에 뿌려주었다. 상온에서 5분동안 기다린 후 scraper로 세포를 잘 긁어 파괴된 세포를 1.5ml e-tube로 옮기고 -80 냉동고에 보관 후 sample을 NGS 분석기관(ebiogen 社)에 전달하였다.In order to confirm the concentration of 9-cis-retinoate (P9CRA) without cytotoxicity, the MTS Assay shown in FIG. 12 was used, and the cells were sprayed so that the optimal concentration was 1.25uM. After culturing for 24 hours in a 5% CO 2 incubator, 1 ml of trizol reagent was sprayed on 75T-flask for RNA isolation. After waiting at room temperature for 5 minutes, scrape the cells well with a scraper, transfer the destroyed cells to a 1.5ml e-tube, store them in a -80 freezer, and transfer the samples to an NGS analysis institution (ebiogen).
도 13은 실험예 2에 따른 전체 유전자의 변화의 분포를 나타내는 Scatter Plot을 나타낸다. ISMC에서 Potassium 9-cis-retinoate(P9CRA) 처리에 따른 총 발현 mRNA 갯수 24,426에 하여 증가(increased)/감소(decreed) 된 유전자를 확인하여 그래프화 하였을 때 control세포와 약물(P9CRA) 적용 세포 사이에서 각 유전자에 대한 log2(Normalized data)의 분포를 보여주고 있으며. 13 shows a Scatter Plot showing the distribution of changes in all genes according to Experimental Example 2. When the increased (increased) / decreased (decreed) genes were identified and graphed by the total number of mRNAs expressed by 24,426 treatment with Potassium 9-cis-retinoate (P9CRA) in ISMC, between control cells and drug (P9CRA) applied cells It shows the distribution of log2 (Normalized data) for each gene.
가로축은 대조군(control)의 log2(Normalized data)를, 세로축은 실험군(P9CRA)의 log2(Normalized data)를 나타낸다. 가운데 검은색 사선에 위치한 유전자들은 두 샘플에서 같은 발현값을 갖는 유전자들이며, 적색 사선과 녹색 사선은 각각 2배 기준 증가/감소를 나타낸다. The horizontal axis represents log2 (Normalized data) of the control group, and the vertical axis represents log2 (Normalized data) of the experimental group (P9CRA). The genes located in the black oblique line in the middle are genes having the same expression value in both samples, and the red and green lines indicate the double standard increase/decrease, respectively.
적색 사선 위에 위치한 유전자들이 대조군에 비해 실험군에서 2배 이상 상승(up)되는 유전자들, 녹색 사선 아래에 위치한 유전자들이 대조군에 비해 실험군에서 2배 이상 감소(down)되는 유전자들이다. 상승된 붉은색 유전자 개수는 592개, 감소된 녹색유전자 개수는 452개이다. Genes located above the red slanted line are genes that are more than doubled in the experimental group compared to the control group, and genes located below the green slanted are genes that are down 2 times or more in the experimental group compared to the control group. The increased number of red genes was 592 and the decreased number of green genes was 452.
도 14는 본 발명의 실험예 2에 따른 Intergrative Genomics Viewer (IGV) Mapping grap를 나타낸다. Intergrative Genomics Viewer (IGV)은 reference genome에 reads가 mapping된 결과를 이미지상으로 확인한 것으로 유전자 패턴을 관찰하였다. P9CRA 약물 처리에 따른 유전자의 삽입, 결손이 빈번하게 발생하는 위치에 대해 정리된 데이터베이스를 활용 BAM file을 재구성하였다. 14 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 2 of the present invention. The Intergrative Genomics Viewer (IGV) observed the gene pattern by confirming the result of mapping the reads to the reference genome on the image. The BAM file was reconstructed using the organized database for the locations where gene insertions and deletions frequently occur according to P9CRA drug treatment.
도 14에 도시된 control의 붉은색 마크는 이종유전자형(heteo genotype)을 나타낸다. Bam file의 coverage에 색상이 있는 부분은 이종유전자형(heteo genotype), 즉 Single Nucleotide polymorphism(SNP)가 일어난 base 부분으로 뉴클레오타이드(nucleotide)는 회색이며, 빨간색은 T(Thymine), 초록색은 A(Adenine), 파란색은 C(Cytosine), 노란색은 G(Guanine)이며, 색상의 변화는 염기의 mutation이 일어난 부분을 의미하며, 보라색으로 되어있는 부분은 reference genome과 sample의 sequence를 비교했을 때 염기가 insertion 되어있는 부분을 나타낸다. A red mark of the control shown in FIG. 14 indicates a heterogenotype. The colored part of the coverage of the Bam file is the heterogenotype, that is, the base part where Single Nucleotide polymorphism (SNP) has occurred. The nucleotide is gray, the red is T (Thymine), and the green is A (Adenine). , blue is C (Cytosine), yellow is G (Guanine), and the color change means the part where the base mutation has occurred, and the purple part is when the base is inserted when comparing the sequence of the reference genome with the sample. indicates the part
결과적으로 P9CRA 약물 처리에 따른 이종유자형변화가 아주없다고는 할 수 없으나 control에 비해 현저히 사라진 것을 확인할 수 있다. 즉 P9CRA 약물이 rimary Human Intestinal Smooth Muscle Cells (ISMC)에서 발생할 수 있는 돌연변이 현상을 세포의 돌연변이 현상을 막아주고 현상을 보호함을 확인할 수 있다. As a result, although it cannot be said that there is no heterogeneous change according to P9CRA drug treatment, it can be confirmed that it has significantly disappeared compared to the control. In other words, it can be confirmed that the P9CRA drug prevents the mutation of cells and protects the mutation that can occur in primary Human Intestinal Smooth Muscle Cells (ISMC).
표 8은 본 발명의 실험예 2에 따른 KEGG Mapper Search Result를 나타낸다. P9CRA 약물이 작용기전을 파악하기 위하여 KEGG Mapping 방식으로 pathway분석을 진행하여 총 27개의 pathway를 가지고 있는 유전자군과 각군의 작용분야를 아래와 같이 구분하고, 관련 Category의 세부 gene 항목을 찾고 그 역할을 구분하였다. 표 8에 도시된 바와 같이, 염증, 혈액, 콜레스테롤, 칼슘막 수용체 관련 mRNA와 coding 되는 단백질과 관련 있음을 확인할 수 있었다. Table 8 shows the KEGG Mapper Search Results according to Experimental Example 2 of the present invention. In order to understand the mechanism of action of the P9CRA drug, the pathway analysis was carried out using the KEGG mapping method to classify the gene group having a total of 27 pathways and the field of action of each group as follows, find detailed gene items in the relevant category, and classify their roles did As shown in Table 8, it was confirmed that it was related to inflammation, blood, cholesterol, calcium membrane receptor-related mRNA and coding protein.
hsa04080 Neuroactive ligand-receptor interaction - Homo sapiens (human) (2) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa:6915 TBXA2R; thromboxane A2 receptor : 혈액 응고 hsa04979 Cholesterol metabolism - Homo sapiens (human) (2) hsa:19 ABCA1; ATP binding cassette subfamily A member 1 : 콜레스테롤 대사 hsa:348 APOE; apolipoprotein E : 콜레스테롤 대사 hsa05200 Pathways in cancer - Homo sapiens (human) (2) [Cancer network viewer] hsa:1050 CEBPA; CCAAT enhancer binding protein alpha : 콜레스테롤 대사 hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa04020 Calcium signaling pathway - Homo sapiens (human) (2) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 hsa:6915 TBXA2R; thromboxane A2 receptor ; 혈액 응고 hsa04261 Adrenergic signaling in cardiomyocytes - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa04015 Rap1 signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa04978 Mineral absorption - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa05130 Pathogenic Escherichia coli infection - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa04972 Pancreatic secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa04022 cGMP-PKG signaling pathway - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa05202 Transcriptional misregulation in cancer - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha : 콜레스테롤 대사 hsa04024 cAMP signaling pathway - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa04975 Fat digestion and absorption - Homo sapiens (human) (1) hsa:19 ABCA1; ATP binding cassette subfamily A member 1 : 콜레스테롤 대사 hsa04970 Salivary secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 : 칼슘막 관통 수송체 활성 hsa04932 Non-alcoholic fatty liver disease - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha : 콜레스테롤 대사 hsa00100 Steroid biosynthesis - Homo sapiens (human) (1) hsa:6713 SQLE; squalene epoxidase : 콜레스테롤 대사 hsa01100 Metabolic pathways - Homo sapiens (human) (1) hsa:6713 SQLE; squalene epoxidase : 콜레스테롤 대사 hsa04925 Aldosterone synthesis and secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 hsa04810 Regulation of actin cytoskeleton - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa04611 Platelet activation - Homo sapiens (human) (1) hsa:6915 TBXA2R; thromboxane A2 receptor ; 혈액 응고 hsa04928 Parathyroid hormone synthesis, secretion and action - Homo sapiens (human) (1) hsa:9935 MAFB; MAF bZIP transcription factor B : 콜레스테롤 대사 hsa04072 Phospholipase D signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa02010 ABC transporters - Homo sapiens (human) (1) hsa:19 ABCA1; ATP binding cassette subfamily A member 1 : 콜레스테롤 대사 hsa05010 Alzheimer disease - Homo sapiens (human) (1) hsa:348 APOE; apolipoprotein E : 콜레스테롤 대사 hsa04961 Endocrine and other factor-regulated calcium reabsorption-Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 ; 칼슘 막 관통 수송 체 활성 hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2 : 염증반응 hsa05221 Acute myeloid leukemia - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha : 콜레스테롤 대사 hsa04080 Neuroactive ligand-receptor interaction - Homo sapiens (human) (2) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa:6915 TBXA2R; thromboxane A2 receptor: blood clotting hsa04979 Cholesterol metabolism - Homo sapiens (human) (2) hsa:19 ABCA1; ATP binding cassette subfamily A member 1: cholesterol metabolism hsa:348 APOE; apolipoprotein E: cholesterol metabolism hsa05200 Pathways in cancer - Homo sapiens (human) (2) [Cancer network viewer] hsa:1050 CEBPA; CCAAT enhancer binding protein alpha: cholesterol metabolism hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa04020 Calcium signaling pathway - Homo sapiens (human) (2) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1 hsa:6915 TBXA2R; thromboxane A2 receptor; blood clot hsa04261 Adrenergic signaling in cardiomyocytes - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa04015 Rap1 signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa04978 Mineral absorption - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa05130 Pathogenic Escherichia coli infection - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa04972 Pancreatic secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa04022 cGMP-PKG signaling pathway - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa05202 Transcriptional misregulation in cancer - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha: cholesterol metabolism hsa04024 cAMP signaling pathway - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa04975 Fat digestion and absorption - Homo sapiens (human) (1) hsa:19 ABCA1; ATP binding cassette subfamily A member 1: cholesterol metabolism hsa04970 Salivary secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1: Calcium transmembrane transporter activity hsa04932 Non-alcoholic fatty liver disease - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha: cholesterol metabolism hsa00100 Steroid biosynthesis - Homo sapiens (human) (1) hsa:6713 SQLE; squalene epoxidase: cholesterol metabolism hsa01100 Metabolic pathways - Homo sapiens (human) (1) hsa:6713 SQLE; squalene epoxidase: cholesterol metabolism hsa04925 Aldosterone synthesis and secretion - Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca2+ transporting 1 hsa04810 Regulation of actin cytoskeleton - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa04611 Platelet activation - Homo sapiens (human) (1) hsa:6915 TBXA2R; thromboxane A2 receptor; blood clot hsa04928 Parathyroid hormone synthesis, secretion and action - Homo sapiens (human) (1) hsa:9935 MAFB; MAF bZIP transcription factor B: cholesterol metabolism hsa04072 Phospholipase D signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa02010 ABC transporters - Homo sapiens (human) (1) hsa:19 ABCA1; ATP binding cassette subfamily A member 1: cholesterol metabolism hsa05010 Alzheimer disease - Homo sapiens (human) (1) hsa:348 APOE; apolipoprotein E: cholesterol metabolism hsa04961 Endocrine and other factor-regulated calcium reabsorption-Homo sapiens (human) (1) hsa:490 ATP2B1; ATPase plasma membrane Ca 2+ transporting 1 ; Calcium transmembrane transporter activity hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human) (1) hsa:9170 LPAR2; lysophosphatidic acid receptor 2: inflammatory response hsa05221 Acute myeloid leukemia - Homo sapiens (human) (1) hsa:1050 CEBPA; CCAAT enhancer binding protein alpha: cholesterol metabolism |
GenomeNet Database Resources는 Kyoto University Bioinformatics Center의 gene category 항목과 Search Result 자료를 바탕으로 분석하였다. 도 15는 DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수를 나타낸다.GenomeNet Database Resources were analyzed based on the gene category items and search result data of Kyoto University Bioinformatics Center. 15 shows the number of genes corresponding to the gene ortholog through DAVID analysis.
DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수는 다음과 같다. 상기의 염증, 혈액, 콜레스테롤, 칼슘막 수용체 관련 mRNA 중 가장 크게 작용하는 Category를 확인하기 위하여 DAVID 분석을 진행하여 콜레스테롤 대사 작용기전과 염증반응 작용기전(2차 알코올 작용기전, 스테로이드 작용기전) 대상 mRNA가 현저하게 감소(Down Count) 됨을 도 15에 도시된 바와 같이 확인할 수 있었다. The number of genes corresponding to the gene ortholog through DAVID analysis is as follows. DAVID analysis was carried out to identify the category of mRNA that acts the most among the mRNAs related to inflammation, blood, cholesterol, and calcium membrane receptors above, and the target mRNA for cholesterol metabolism and inflammatory reaction mechanisms (secondary alcohol action mechanism, steroid action mechanism) As shown in FIG. 15 , it was confirmed that is significantly reduced (Down Count).
결론적으로 NGS 평가를 통하여 ISMC에 적용된 P9CRA에 의하여 총 10개의 유전자 중 control/9CRA로 계산했을 때 2배 이상 차이가 나는 유전자들을 표 9에 도시된 바와 같이 총 10종으로 확인되었으며, 해당 mRNA와 coding Protein이 심혈관 중 특히 죽상동맥경화에 관여됨을 확인하고 NGS Fold Change 값이 도 12에 도시된 바와 같이 2배 이상의 변화를 나타내는 초록색 실선으로부터 Fold change 된 값을 표 9의 평가결과와 같이 정리할 수 있다. In conclusion, as shown in Table 9, genes that differed more than twice when calculated as control/9CRA out of a total of 10 genes by P9CRA applied to ISMC through NGS evaluation were identified as a total of 10 types as shown in Table 9. It can be confirmed that the protein is involved in atherosclerosis in the cardiovascular system, and the fold change value from the green solid line indicating a 2-fold or more change in the NGS Fold Change value as shown in FIG. 12 can be summarized as the evaluation result in Table 9.
죽상동맥경화는 염증으로부터 시작하여 콜레스테롤이 혈액에 싸여 혈관벽에 참착되고 응고 되는 과정에서 Ca2+이온과 결합하여 'atheromatous plaque'(혈관 플라그)로 전개되는 과정이다. 따라서, P9CRA는 죽상동맥경화증 발병 절차에서 볼 수 있는 사람의 면역력이 감소하여 염증반응를 일으키고, 콜레스테롤 섭취를 통해 혈액에 쌓이고, 콜레스테롤을 대식세포(Macrophage)에서 분해하는 과정에서의 장애와 콜레스테롤과 피브리노겔, P-셀랙션에 의한 혈액 응고에 의해 혈관 내 침착되는 콜레스테롤 협착반응 그리고 칼슘이온에 의한 플라그 현상의 진행 과정을 억제하거나 발병된 병증을 완화 및 플라그(Plaque)를 제거하는 역할을 가지고 있음을 유전자 pathway 분석을 통해 확인하였다. Atherosclerosis is a process that starts from inflammation and develops into 'atheromatous plaque' by combining with Ca 2+ ions in the process of being wrapped in blood, encapsulated in the blood vessel wall, and coagulated. Therefore, P9CRA causes an inflammatory response due to a decrease in human immunity, which can be seen in the atherosclerosis pathogenesis process, accumulates in the blood through cholesterol intake, and a disorder in the process of decomposing cholesterol in macrophages and cholesterol and fibrils. It has been shown that it has a role in inhibiting the progress of cholesterol stenosis, which is deposited in blood vessels by blood coagulation by Nogel, P-selection, and plaque phenomenon caused by calcium ions, or alleviating the disease and removing plaque. It was confirmed through gene pathway analysis.
보다 자세하게는 염증반응을 일으키는 LPAR2 mRNA 즉, Lysophosphatidic acid receptor 2는 지질 신호 분자로 G-protein 결합수용체로, Ca2+ 이동과 혈관 내 세포 반응에 기여하는 유전라로 부터 코딩되는 factor X 단백질을 2 + 1.026 = 3.026배 억제하였다. 이로 인해 혈액이 응고되는 진행하는 TBXA2R mRNA를 2 + 0.939 = 2.939배 억제 G-protein 즉, thromboxane A2 상호 작용하여 혈소판 응집을 유도를 억제하는 효과를 가지고 있으며, 모든 콜레스테롤 대사작용과 관련이 mRNA 중 ABCA1, APOE, INSIGI, MafB 즉, ATP-binding cassette (ABC) 수송체는 ABC 단백질은 세포 외/내 막을 통해 다양한 분자를 운반하며, 세포 지질 제거 경로에서 콜레스테롤 유출 펌프 역할을 향상하며, 소장에서 흡수된 후 혈액 또는 림프에 존재하는 지방의 주요 아포단백질(APOE) 혈장 콜레스테롤과 중성 지방의 증가 및 VLDL 잔여물의 제거를 활성화하고, 지방 생성 및 포도당 항상성을 조절하는 소포체 막 단백질을 암호화하고 스테롤조절요소결합 단백질(SREBP), 절단활성화 단백질(SCAP) 그리고 3-하이드 록시-3-메틸 글루타릴-코엔자임 A(HMG-CoA) 환원효소와 같은 스테롤 감지 도메인을 결합과 교섭 작용을 활성화한다. In more detail, LPAR2 mRNA that causes an inflammatory response, that is, Lysophosphatidic acid receptor 2, is a lipid signaling molecule that is a G-protein-coupled receptor, and converts the factor X protein encoded by Gene 2 that contributes to Ca 2+ movement and intravascular cellular response. + 1.026 = 3.026-fold inhibition. Due to this, it inhibits TBXA2R mRNA 2 + 0.939 = 2.939 fold, which causes blood to clot, interacts with G-protein, that is, thromboxane A2 to inhibit platelet aggregation, and is related to all cholesterol metabolism. , APOE, INSIGI, MafB, or ATP-binding cassette (ABC) transporter, is an ABC protein that transports a variety of molecules across the extracellular/intrinsic membrane, enhances the cholesterol efflux pump role in the cellular lipid clearance pathway, and is absorbed from the small intestine. Adipose major apolipoprotein (APOE) present in the post-blood or lymphatic system, encodes an endoplasmic reticulum membrane protein that activates increases in plasma cholesterol and triglycerides and clearance of VLDL residues, and regulates adipogenesis and glucose homeostasis and is a sterol regulatory element binding protein (SREBP), cleavage activation protein (SCAP), and sterol-sensing domains such as 3-hydroxy-3-methyl glutaryl-coenzyme A (HMG-CoA) reductase activate binding and negotiation actions.
No.No. | Gene CatagoryGene Category | 목표 효과 / NGS Fold ChangeTarget Effect / NGS Fold Change | 평가 대상evaluation target | |
Protein Coding (On Chip 시험 후 분석)Protein Coding (Analysis after on-chip test) |
||||
효능efficacy | ||||
1One | Blood coagulationBlood coagulation | inhibitor / 0.939 decreaseinhibitor / 0.939 decrease | G-proteinG-protein |
(TBXA2R) Thromboxane A2 receptor(TBXA2R) |
22 | Inflammatory resoponseInflammatory response |
inhibitor / 1.126 decreaseinhibitor / 1.126 decrease |
Tissue factor X (factor X)Tissue factor X (factor X) | lysophosphatidic acid receptor 2 (LPAR2)lysophosphatidic acid receptor 2 (LPAR2) |
33 | calcium transmembrane transporter activitycalcium transmembrane transporter activity | inhibitor / 0.724 decreaseinhibitor / 0.724 decrease | ATPase plasma membrane Ca2+ transporting 1 ATPase plasma membrane Ca2+ transporting 1 | (ATP2B1) ATPase plasma membrane Ca2+ transporting 1(ATP2B1) ATPase plasma membrane Ca2+ transporting 1 |
44 | cholesterol metabolic processcholesterol metabolic process |
Induce/ 6.674 increase Induce/ 6.674 increase |
cholesterol efflux regulatory protein (CERP)_ABCA1cholesterol efflux regulatory protein (CERP)_ABCA1 |
(ABCA1) ATP binding cassette subfamily A member 1(ABCA1) ATP binding cassette |
inhibitor / 0.992 decrease inhibitor / 0.992 decrease | Apolipoprotein B Apolipoprotein B | (APOBR) apolipoprotein B receptor (APOBR) apolipoprotein B receptor | ||
Induce/ 1.099 increase Induce/ 1.099 increase |
Apolipoprotein E Apolipoprotein E | (APOE) apolipoprotein E (APOE) apolipoprotein E | ||
inhibitor / 0.941 decrease inhibitor / 0.941 decrease | C/EBPC/EBP | (CEBPA) CCAAT enhancer binding protein alpha(CEBPA) CCAAT enhancer binding protein alpha | ||
Induce/ 1.003 increase Induce/ 1.003 increase |
Insulin-induced gene 1 proteinInsulin-induced |
(INSIGI) insulin induced gene 1(INSIGI) insulin induced |
||
Induce/ 1.307 increase Induce/ 1.307 increase | Transcription factor MafBTranscription factor MafB | MafBMafB | ||
inhibitor / 0.931 decrease inhibitor / 0.931 decrease | squalene epoxidase squalene epoxidase | (SQLE) Squalene monooxygenase (SQLE) Squalene monooxygenase |
각각의 유전자는 8.674, 3.099, 3.003, 3.307 향상 효과를 보였다. 반면 SQLE(2.931배) 감소시키는 효과 즉, Apolipoprotein B48 receptor는 macrophage receptor는 triglyceride (TG)와 결합하고 혈장 중성 지방이 상승시키며, 아포지단백 B48 수용체를 통해 foam cell 형성과 내피 기능 장애 및 죽상동맥경화를 발병시키는 mRNA이며, APOBR(2.992배) 억제한다. Each gene showed an improvement effect of 8.674, 3.099, 3.003, and 3.307. On the other hand, the effect of reducing SQLE (2.931 times), that is, apolipoprotein B48 receptor macrophage receptor binds triglyceride (TG) and increases plasma triglycerides, and through apolipoprotein B48 receptor foam cell formation, endothelial dysfunction and atherosclerosis It is a pathogenic mRNA and inhibits APOBR (2.992 fold).
이 mRNA는 CEBPA에 의해 코딩되는 C/EBP 단백질의 활성은 체중 항상성뿐만 아니라 세포주기 조절에 관여하는 유전자의 발현을 조절할 수 있으며, 돌연변이는 급성 골수성 백혈병원인 유전자 mRNA로 억제함을 보여주고 있으며, 그 값은 2.941배이다. This mRNA shows that the activity of C/EBP protein encoded by CEBPA can regulate the expression of genes involved in cell cycle regulation as well as body weight homeostasis, and that the mutation is suppressed by the gene mRNA, which is an acute myeloid leukemia pathogen. The value is 2.941 times.
또한 SQLE mRNA인 Squalene monooxygenase는 스쿠알렌 에폭시 다제(squalene epoxidase)라는 성분의 억제제로 사용되는 물질을 코팅하는 유전자로 이 단백질은 항진균제 작용기전을 가지고 있으며 Butenafine, Naftifine, Terbinafine 등의 명칭으로 사용되고 있으며, 스쿠알렌 에폭시 다제 억제 작용기전은 고콜레스테롤 혈증 치료의 하나의 방법이다.Also, SQLE mRNA, Squalene monooxygenase, is a gene that coats a substance used as an inhibitor of a component called squalene epoxidase. This protein has an antifungal mechanism of action. The multidrug inhibitory mechanism of action is one method of treating hypercholesterolemia.
<실험예 3> THP-1 cells 및 Potassium All trans retinoate(PATRA) 적용 NGS <Experimental Example 3> NGS applied with THP-1 cells and Potassium All trans retinoate (PATRA)
THP-1 cell을 5 x 106 개수만큼 cell media랑 섞은 후 T-75 flask에 뿌려주고, 5% CO2 incubator에서 overnight 시킨다. PATRA를 도 16에 도시된 MTS Assay를 통해 세포독성이 없는 농도에서 최적농도 0.625uM이 되도록 cell에 뿌려주고 5% CO2 incubator에서 24시간 배양한다. After mixing the number of THP-1 cells with the cell media as many as 5 x 10 6 , spray them in a T-75 flask, and incubate in a 5% CO 2 incubator overnight. PATRA is sprayed on the cells to an optimal concentration of 0.625uM at a non-cytotoxic concentration through the MTS Assay shown in FIG. 16, and incubated in a 5% CO 2 incubator for 24 hours.
이후 flask에 있는 세포부유물을 50ml tube로 옮기고 Cell down을 위해 1300rpm, 3min 25도씨 기준으로 centrifugation 한다. 상층액을 제거하고 남아있는 cell pellet에 RNA isolation을 위해 trizol reagent 1ml 뿌려주고 Cell이 잘 파괴되도록 pipetting 한 후, 세포가 포함된 trizol 용액을 1.5ml e-tube로 옮기고 -80 냉동고에 보관 후 sample을 NGS 기관(ebiogen)에 전달하였다.After that, the cell suspension in the flask is transferred to a 50ml tube and centrifuged at 1300rpm, 3min, 25°C for cell down. After removing the supernatant and spraying 1ml of trizol reagent for RNA isolation on the remaining cell pellet, pipetting so that the cells are well destroyed, transfer the trizol solution containing the cells to a 1.5ml e-tube and store the sample in -80 freezer It was delivered to an NGS institution (ebiogen).
도 17은 본 발명의 실험예 3에 따른 전체 유전자의 변화의 분포를 나타내는 Scatter Plot을 나타낸다. THP-1 cells에서 Potassium All-trans retinoate(P9CRA) 처리에 따른 총 발현 mRNA 갯수 24,426에 하여 증가(increased)/감소(decreed) 된 유전자를 확인하여 그래프화하였을 때 control세포와 약물(PATRA) 적용 세포 사이에서 각 유전자에 대한 log2(Normalized data)의 분포를 보여주고 있으며. 가로축은 대조군(control)의 log2(Normalized data)를, 세로축은 실험군(PATRA)의 log2(Normalized data)를 나타낸다. 17 shows a scatter plot showing the distribution of changes in all genes according to Experimental Example 3 of the present invention. In THP-1 cells, the total number of mRNAs expressed by the treatment with Potassium All-trans retinoate (P9CRA) was 24,426, and the increased (increased) / decreased (decreed) genes were identified and graphed. Control cells and cells applied with the drug (PATRA) It shows the distribution of log2 (Normalized data) for each gene in between. The horizontal axis represents log2 (Normalized data) of the control group, and the vertical axis represents log2 (Normalized data) of the experimental group (PATRA).
가운데 검은색 사선에 위치한 유전자들은 두 샘플에서 같은 발현값을 갖는 유전자들이며, 적색 사선과 녹색 사선은 각각 2배 기준 증가/감소를 나타낸다. 적색 사선 위에 위치한 유전자들이 대조군에 비해 실험군에서 2배 이상 상승(up)되는 유전자들, 녹색 사선 아래에 위치한 유전자들이 대조군에 비해 실험군에서 2배 이상 감소(down)되는 유전자들이다. 상승된 붉은색 유전자 개수는 47개, 감소된 녹색유전자 개수는 195개이다. The genes located in the black oblique line in the middle are genes having the same expression value in both samples, and the red and green lines indicate the double standard increase/decrease, respectively. Genes located above the red slanted line are genes that are more than doubled in the experimental group compared to the control group, and genes located below the green slanted are genes that are down 2 times or more in the experimental group compared to the control group. The increased number of red genes was 47, and the decreased number of green genes was 195.
도 18은 본 발명의 실험예 3에 따른 Intergrative Genomics Viewer (IGV) Mapping grap를 나타낸다. Intergrative Genomics Viewer (IGV)은 reference genome에 reads가 mapping된 결과를 이미지상으로 확인한 것으로 유전자 패턴을 관찰하였다. PATRA 약물 처리에 따른 유전자의 삽입, 결손이 빈번하게 발생하는 위치에 대해 정리된 데이터베이스를 활용 BAM file을 재구성하였다. 18 shows an Intergrative Genomics Viewer (IGV) Mapping grip according to Experimental Example 3 of the present invention. The Intergrative Genomics Viewer (IGV) observed the gene pattern by confirming the result of mapping the reads to the reference genome on the image. The BAM file was reconstructed using a database organized for the locations where gene insertions and deletions frequently occur according to PATRA drug treatment.
도 18의 control 붉은색 마크는 이종유전자형(heteo genotype)을 나타내고 있내고 있다. 도 18의 Bam file의 coverage에 색상이 있는 부분은 이종유전자형(heteo genotype), 즉 Single Nucleotide polymorphism(SNP)가 일어난 base 부분으로 뉴클레오타이드(nucleotide)는 회색이며, 초록색은 A(Adenine), 결과적으로 PATRA 약물 처리에 따른 이종유자형이 control에 비해 SNP가 발생하는 것으로 확인되고 있다. 즉 PATRA 약물이 단핵구 세포(THP-1 cells)에서 A(adenine)형 유전자형태로 돌연변이 현상을 보일 수 있음을 확인할 수 있다. A control red mark in FIG. 18 indicates a heterogenotype. The colored part in the coverage of the Bam file in FIG. 18 is the base part where the heterogenotype, that is, single nucleotide polymorphism (SNP) occurred, and the nucleotide is gray, and the green is A (Adenine), as a result PATRA It is confirmed that the heterozygous type according to the drug treatment produces SNPs compared to the control. That is, it can be confirmed that the PATRA drug can show a mutation in the A (adenine) genotype in monocytes (THP-1 cells).
표 10은 본 발명의 실험예 3에 따른 KEGG Mapper Search Result를 나타낸다. PATRA 약물이 작용기전을 파악하기 위하여 KEGG Mapping 방식으로 pathway분석을 진행하여 총 35개의 pathway를 가지고 있는 유전자군과 각군의 작용분야를 구분하고, 관련 Category의 세부 gene 항목을 찾고 그 역할을 구분하였다. 표 10의 혈액응고, 항 종양, 조혈작용 및 항산화 관련 mRNA와 coding 되는 단백질과 관련 있음을 확인할 수 있었다. GenomeNet Database Resources는 Kyoto University Bioinformatics Center의 gene category 항목과 Search Result 자료를 바탕으로 분석하였다.Table 10 shows the KEGG Mapper Search Results according to Experimental Example 3 of the present invention. In order to understand the mechanism of action of PATRA drugs, the pathway analysis was carried out using the KEGG mapping method, and the gene group having a total of 35 pathways and the field of action of each group were divided, and the detailed gene items of the related categories were found and their roles were divided. It was confirmed that it was related to the mRNA and coding proteins related to blood coagulation, anti-tumor, hematopoiesis and antioxidant in Table 10. GenomeNet Database Resources were analyzed based on the gene category items and search result data of Kyoto University Bioinformatics Center.
도 19은 본 발명의 실험예 3에 따른 DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수를 나타낸다. DAVID 분석을 통한 gene ortholog에 해당되는 gene 개수는 다음과 같다. 상기의 혈액응고, 항 종양, 조혈작용 및 항산화관련 mRNA 중 가장 크게 작용하는 Category를 확인하기 위하여 DAVID 분석을 진행하여 세포 성분(cellular component) 작용기전과 혈액 응고 작용기전 대상 mRNA가 현저하게 증가(Up Count) 됨을 확인할 수 있었다. 표 11은 본 발명의 실험예 3에 따른 평가결과를 나타낸다.19 shows the number of genes corresponding to gene orthologs through DAVID analysis according to Experimental Example 3 of the present invention. The number of genes corresponding to the gene ortholog through DAVID analysis is as follows. DAVID analysis was carried out to confirm the category that acts the most among the blood coagulation, anti-tumor, hematopoietic, and antioxidant-related mRNAs, and the cellular component action mechanism and the blood clotting action mechanism target mRNA significantly increased (Up). Count) was confirmed. Table 11 shows the evaluation results according to Experimental Example 3 of the present invention.
결론적으로 상기의 KEGG Mapper에서 DNA Bindding pathway 항목의 mRNA 유전자군 즉, hsa04350 TGF-beta signaling pathway 세부 mRNA hsa:3397, hsa:3398, hsa04550 Signaling pathways regulating pluripotency of stem cells, hsa04390 Hippo signaling pathway, hsa04015 Rap1 signaling pathway 세부 mRNA hsa:3397, 그리고 유전자 암호화 mRNA 유전자군 즉, hsa04120 Ubiquitin mediated proteolysis, hsa05203 Viral carcinogenesis, hsa04114 Oocyte meiosis, hsa05166 Human T-cell leukemia virus 1 infection, hsa04110 Cell cycle, hsa05202 Transcriptional misregulation in cancer는 평가대상에서 제외하였으며, Protein을 coding하는 mRNA 유전자를 확인하였다. In conclusion, the mRNA gene group of the DNA binding pathway item in the KEGG Mapper, that is, hsa04350 TGF-beta signaling pathway detailed mRNA hsa:3397, hsa:3398, hsa04550 Signaling pathways regulating pluripotency of stem cells, hsa04390 Hippo signaling pathway, hsa04015 Rap1 signaling The detailed pathway mRNA hsa:3397, and the gene encoding mRNA gene group, i.e., hsa04120 Ubiquitin mediated proteolysis, hsa05203 Viral carcinogenesis, hsa04114 Oocyte meiosis, hsa05166 Human T-cell leukemia virus 1 infection, hsa04110 Cell cycle, hsa05202 Transcriptional misregulation in cancer are evaluated was excluded, and the mRNA gene encoding the protein was identified.
hsa04350 TGF-beta signaling pathway - Homo sapiens (human) (3) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein : hsa:3398 ID2; inhibitor of DNA binding 2 hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05144 Malaria - Homo sapiens (human) (2) hsa:6382 SDC1; syndecan 1 ; 혈액응고 hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa04145 Phagosome - Homo sapiens (human) (2) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa05016 Huntington disease - Homo sapiens (human) (2) hsa:6648 SOD2; superoxide dismutase 2 : 항산화 hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa04550 Signaling pathways regulating pluripotency of stem cells - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:3398 ID2; inhibitor of DNA binding 2 hsa04390 Hippo signaling pathway - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:3398 ID2; inhibitor of DNA binding 2 hsa04015 Rap1 signaling pathway - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05132 Salmonella infection - Homo sapiens (human) (2) hsa:5420 PODXL; podocalyxin like : 조혈작용 hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa05205 Proteoglycans in cancer - Homo sapiens (human) (2) hsa:6382 SDC1; syndecan 1 : 혈액응고 hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa04512 ECM-receptor interaction - Homo sapiens (human) (2) hsa:6382 SDC1; syndecan 1 ; 혈액응고 hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05014 Amyotrophic lateral sclerosis - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa04514 Cell adhesion molecules - Homo sapiens (human) (1) hsa:6382 SDC1; syndecan 1 : 혈액응고 hsa04120 Ubiquitin mediated proteolysis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20 : 유전자 암호화 단백질 hsa05012 Parkinson disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa05418 Fluid shear stress and atherosclerosis - Homo sapiens (human) (1) hsa:6382 SDC1; syndecan 1 : 혈액응고 hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05203 Viral carcinogenesis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20 : 유전자 암호화 단백질 hsa05219 Bladder cancer - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa04114 Oocyte meiosis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20 : 유전자 암호화 단백질 hsa04068 FoxO signaling pathway - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2 : 항산화 hsa04211 Longevity regulating pathway - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2 : 항산화 hsa05165 Human papillomavirus infection - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05022 Pathways of neurodegeneration - multiple diseases - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa04510 Focal adhesion - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 혈액응고 hsa04213 Longevity regulating pathway - multiple species - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2 : 항산화 hsa05020 Prion disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa04540 Gap junction - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa04115 p53 signaling pathway - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05130 Pathogenic Escherichia coli infection - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa05010 Alzheimer disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb : 항 종양 hsa05206 MicroRNAs in cancer - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1 : 혈액응고 hsa05166 Human T-cell leukemia virus 1 infection - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20 : 유전자 암호화 단백질 hsa04146 Peroxisome - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2 : 항산화 hsa04110 Cell cycle - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20 : 유전자 암호화 단백질 hsa05202 Transcriptional misregulation in cancer - Homo sapiens (human) (1) hsa:3398 ID2; inhibitor of DNA binding 2hsa04350 TGF-beta signaling pathway - Homo sapiens (human) (3) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein: hsa:3398 ID2; inhibitor of DNA binding 2 hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05144 Malaria - Homo sapiens (human) (2) hsa:6382 SDC1; hsa:7057 THBS1; thrombospondin 1: blood clotting hsa04145 Phagosome - Homo sapiens (human) (2) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05016 Huntington disease - Homo sapiens (human) (2) hsa:6648 SOD2; superoxide dismutase 2: antioxidant hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa04550 Signaling pathways regulating pluripotency of stem cells - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:3398 ID2; inhibitor of DNA binding 2 hsa04390 Hippo signaling pathway - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:3398 ID2; inhibitor of DNA binding 2 hsa04015 Rap1 signaling pathway - Homo sapiens (human) (2) hsa:3397 ID1; inhibitor of DNA binding 1, HLH protein hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05132 Salmonella infection - Homo sapiens (human) (2) hsa:5420 PODXL; podocalyxin like: hematopoietic action hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05205 Proteoglycans in cancer - Homo sapiens (human) (2) hsa:6382 SDC1; syndecan 1: blood clotting hsa:7057 THBS1; thrombospondin 1: blood clotting hsa04512 ECM-receptor interaction - Homo sapiens (human) (2) hsa:6382 SDC1; hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05014 Amyotrophic lateral sclerosis - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa04514 Cell adhesion molecules - Homo sapiens (human) (1) hsa:6382 SDC1; syndecan 1: blood clotting hsa04120 Ubiquitin mediated proteolysis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20: gene encoding protein hsa05012 Parkinson disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05418 Fluid shear stress and atherosclerosis - Homo sapiens (human) (1) hsa:6382 SDC1; syndecan 1: blood clotting hsa04151 PI3K-Akt signaling pathway - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05203 Viral carcinogenesis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20: gene encoding protein hsa05219 Bladder cancer - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa04114 Oocyte meiosis - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20: gene encoding protein hsa04068 FoxO signaling pathway - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2: antioxidant hsa04211 Longevity regulating pathway - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2: antioxidant hsa05165 Human papillomavirus infection - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05022 Pathways of neurodegeneration - multiple diseases - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa04510 Focal adhesion - Homo sapiens (human) (1) hsa:7057 THBS1; hsa04213 Longevity regulating pathway - multiple species - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2: antioxidant hsa05020 Prion disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa04540 Gap junction - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa04115 p53 signaling pathway - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05130 Pathogenic Escherichia coli infection - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05010 Alzheimer disease - Homo sapiens (human) (1) hsa:10383 TUBB4B; tubulin beta 4B class IVb: antitumor hsa05206 MicroRNAs in cancer - Homo sapiens (human) (1) hsa:7057 THBS1; thrombospondin 1: blood clotting hsa05166 Human T- hsa:991 CDC20; cell division cycle 20: gene encoding protein hsa04146 Peroxisome - Homo sapiens (human) (1) hsa:6648 SOD2; superoxide dismutase 2: antioxidant hsa04110 Cell cycle - Homo sapiens (human) (1) hsa:991 CDC20; cell division cycle 20: gene encoding protein hsa05202 Transcriptional misregulation in cancer - Homo sapiens (human) (1) hsa:3398 ID2; inhibitor of DNA binding 2 |
보다 자세하게는 THBS1 mRNA는 피브리노겐(fibrinogen), 피브로넥틴(fibronectin), 라미닌(laminin), 콜라겐 유형(collagens types) V 및 VII 및 인테그린 알파(integrins alpha)-V / 베타(beta) -1에 결합하여 혈소판 응집, 혈관 신생 및 종양 생성에서 역할을 하다. SDC1 mRNA 코딩(coding) 단백질(Syndecan 1)은 막 관통 (I 형) 헤파 란 설페이트 프로테오글리칸(transmembrane (type I) heparan sulfate proteoglycan)이다. In more detail, THBS1 mRNA binds to fibrinogen, fibronectin, laminin, collagen types V and VII and integrins alpha-V / beta -1 to platelets. It plays a role in aggregation, angiogenesis and tumorigenesis. SDC1 mRNA coding protein (Syndecan 1) is a transmembrane (type I) heparan sulfate proteoglycan.
이 두 유전자는 혈액응고에 관여하며, 각각 2배 + 0.848배로 2.848배와 3.232배 증가함을 보여주었다. TUBB4B mRNA는 섬모 중심체 - 혈장막 (ciliary basal body-plasma membrane) 도킹(Docking)시키는 단백질로 항종양 튜블린 억제효과를 보인다. PODXL 유전자는 CD34 sialomucin 단백질 계열의 구성원을 암호화하는 조혈작용을 돕는다. EC세포에 적용된 PATRA에 의한 PODXL 유전자의 발현은 2.971 증가 되었으며, PODXL2 발현변화는 2.992배 증가 발현되었다. These two genes are involved in blood coagulation, and showed an increase of 2.848-fold and 3.232-fold, respectively, to 2-fold + 0.848-fold. TUBB4B mRNA is a protein that docks the ciliary basal body-plasma membrane and has antitumor tubulin inhibitory effects. The PODXL gene encodes a member of the CD34 sialomucin protein family and aids in hematopoiesis. The expression of PODXL gene by PATRA applied to EC cells was increased by 2.971, and the change in PODXL2 expression was increased by 2.992 times.
SOD 유전자는 heparan sulfate proteoglycan과 collagen과의 상호작용을 통해 세포외 기질 및 세포표면에 고정되는 글리코실화된 homotetramer 형성을 통해 항산화 효과를 발휘한다. 즉, 세포로부터 나오는 글루코스 코팅효과를 통해 항산화 효과를 발휘하는 것이다. SOD2의 증가발현은 Control 군에 비해 3.039배 증가됨을 보인다. The SOD gene exerts antioxidant effects through the formation of glycosylated homotetramers fixed to the extracellular matrix and cell surface through interaction with heparan sulfate proteoglycan and collagen. That is, it exerts an antioxidant effect through the glucose coating effect from the cells. The increased expression of SOD2 showed a 3.039-fold increase compared to the Control group.
또한 콜레스테롤 대사작용, 염증반응, 칼슘막 수용체 활성에 대한 mRNA 값은 변화는 실시의 예 1의 Potassium 9-cis-retinoate(P9CRA)의 ISMC 세포에서이 확연한 차이보다는 높지 않았으나, PATRA도 역시 동일 유형의 mRNA에서 유의한 변화 값을 보인다.In addition, the change in mRNA values for cholesterol metabolism, inflammatory response, and calcium membrane receptor activity was not higher than this clear difference in ISMC cells of Potassium 9-cis-retinoate (P9CRA) of Example 1, but PATRA was also the same type of mRNA shows a significant change in
No.No. | Gene CatagoryGene Category | 목표 효과 / NGS Fold ChangeTarget Effect / NGS Fold Change | 평가 대상evaluation target | |
Protein Coding (On Chip 시험 후 분석)Protein Coding (Analysis after on-chip test) |
||||
효능efficacy | ||||
1One | Blood coagulationBlood coagulation | Induce / 0.848 Increase Induce / 0.848 Increase | Syndecan 1Syndecan 1 |
(SDC1) (SDC1) |
Induce / 1.232 IncreaseInduce / 1.232 Increase | THBS1THBS1 |
(THBS1) Thrombospondin 1(THBS1) |
||
22 | Inflammatory resoponseInflammatory response | inhibitor / 0.870 decreaseinhibitor / 0.870 decrease | Tissue factor X (factor X)Tissue factor X (factor X) | lysophosphatidic acid receptor 2 (LPAR2)lysophosphatidic acid receptor 2 (LPAR2) |
33 | AntineoplasticAntineoplastic |
inhibitor / 0.982 decreseinhibitor / 0.982 decrese |
Tubulin beta-4B chainTubulin beta-4B chain |
(TUBB4B) Tubulin beta-4A chain(TUBB4B) Tubulin beta- |
44 | Hematopoietic actionHematopoietic action | Induce / 0.232 IncreaseInduce / 0.232 Increase |
Podocalyxin-like protein 1Podocalyxin- |
PODXL |
55 | AntioxidantAntioxidant | Induce / 1.039 IncreaseInduce / 1.039 Increase | Extracellular superoxide dismutase [Cu-Zn]Extracellular superoxide dismutase [Cu-Zn] |
(SOD) superoxide dismutase(SOD) |
33 | calcium transmembrane transporter activitycalcium transmembrane transporter activity |
inhibitor / 1.245 Increaseinhibitor / 1.245 Increase |
ATPase plasma membrane Ca2+ transporting 1ATPase plasma membrane Ca 2+ transporting 1 | (ATP2B1) ATPase plasma membrane Ca2+ transporting 1(ATP2B1) ATPase plasma membrane Ca2+ transporting 1 |
44 | cholesterol metabolic processcholesterol metabolic process | inhibitor / 0.848 decrease inhibitor / 0.848 decrease | cholesterol efflux regulatory protein (CERP)_ABCA1cholesterol efflux regulatory protein (CERP)_ABCA1 |
(ABCA1) ATP binding cassette subfamily A member 1(ABCA1) ATP binding cassette |
inhibitor / 0.984 decrease inhibitor / 0.984 decrease | Apolipoprotein B Apolipoprotein B | (APOBR) apolipoprotein B receptor (APOBR) apolipoprotein B receptor | ||
inhibitor / 1.855 Increase inhibitor / 1.855 Increase | Apolipoprotein E Apolipoprotein E | (APOE) apolipoprotein E (APOE) apolipoprotein E | ||
inhibitor / 0.971 decrease inhibitor / 0.971 decrease | C/EBPC/EBP | (CEBPA) CCAAT enhancer binding protein alpha(CEBPA) CCAAT enhancer binding protein alpha | ||
inhibitor / 1.620 Increase inhibitor / 1.620 Increase |
Insulin-induced gene 1 proteinInsulin-induced |
(INSIGI) insulin induced gene 1(INSIGI) insulin induced |
||
inhibitor / 0.684 decrease inhibitor / 0.684 decrease | Transcription factor MafBTranscription factor MafB | MafBMafB | ||
inhibitor / 1.694 Increase inhibitor / 1.694 Increase | squalene epoxidase squalene epoxidase | (SQLE) Squalene monooxygenase (SQLE) Squalene monooxygenase |
인체흡수 및 생체제 합성 경로를 고려하여 인체 내에서 흡수율이 우수하여 강력한 항산화제로 암과 심혈관 질환의 위험을 낮출 수 있어 관련 질병을 보유하는 환자 및 의료인들의 편의와 이익제고에 보탬이 됨으로 산업상 이용가능성이 있다.Considering the human body absorption and biologic synthesis route, the absorption rate is excellent in the human body, and it is a powerful antioxidant that can lower the risk of cancer and cardiovascular disease. There is a possibility.
Claims (5)
- All-trans retinal을 합성하여 준비하는 단계;Synthesizing and preparing all-trans retinal;상기 준비된 All-trans retinal을 Methanol에 용해하고, Na2PO4와 KMnO4을 멸균증류수(DW)에 녹인 용액을 혼합하여 교반한 후, 냉각하여 all-trans retinoic acid를 결정화하는 단계; dissolving the prepared All-trans retinal in methanol, mixing a solution of Na2PO4 and KMnO4 in sterile distilled water (DW), stirring, and cooling to crystallize all-trans retinoic acid;상기 all-trans retinoic acid에 대하여 Hexane 첨가 후, 멸균증류수에 용해한 KOH를 적가하여 Potassium all-trans retinoate를 합성하는 것을 특징으로 하는 Potassium retinoate 합성방법Potassium retinoate synthesis method, characterized in that after adding hexane to the all-trans retinoic acid, KOH dissolved in sterile distilled water is added dropwise to synthesize Potassium all-trans retinoate
- EtOH에 Methyl β-formylcrotonate을 넣고 KOH 수용액을 첨가한 후, 9-cis phosphonium chloride 에탄올 용액을 첨가한 후, KOH 50% 수용액을 첨가하여 반응을 유지하고 멸균증류수(DW)를 첨가하여 교반 후, 여과하여 9-cis retinoic acid를 결정화하는 단계;Methyl β-formylcrotonate was added to EtOH, KOH aqueous solution was added, 9-cis phosphonium chloride ethanol solution was added, and then 50% KOH aqueous solution was added to maintain the reaction, sterile distilled water (DW) was added, stirred, and then filtered to crystallize 9-cis retinoic acid;상기 9-cis retinoic acid에 대하여 Hexane 첨가 후, 멸균증류수에 용해한 KOH를 적가하여 Potassium 9-cis retinoate를 합성하는 것을 특징으로 하는 Potassium retinoate 합성방법Potassium retinoate synthesis method, characterized in that after adding hexane to the 9-cis retinoic acid, KOH dissolved in sterile distilled water is added dropwise to synthesize potassium 9-cis retinoate
- 청구항 1에 있어서 All-trans retinal의 합성은 The method according to claim 1, wherein the synthesis of all-trans retinal is[단계 A] 2.2.6 trimethyl cyclohexanone과 (Z)-3-Methylpent-2-en-4-yn-1-ol을 반응시키고;[Step A] 2.2.6 reacting trimethyl cyclohexanone with (Z)-3-Methylpent-2-en-4-yn-1-ol;[단계 B] 상기 [단계 A]에서 완성된 acetylene을 리튬 알루미늄 하이드 라이드(Lithium aluminium hydride: LiAlH4)를 사용하여 E-ethylene으로 환원시킨 후,[Step B] After reducing the acetylene completed in [Step A] to E-ethylene using lithium aluminum hydride (LiAlH4),[단계 C] 상기 [단계 B]에서 합성된 케미컬의 말단의 Alcohol기를 선택 산화 반응하여 알데하이드의 생성하며,[Step C] Selective oxidation reaction of the alcohol group at the end of the chemical synthesized in [Step B] produces aldehyde,[단계 D] 상기 [단계 C]에서 합성된 C15 Aldaehyde에 Phosphonium ylides로 C18 hydroxy ester를 합성하며;[Step D] Synthesizing C 18 hydroxy ester with Phosphonium ylides in C 15 Aldaehyde synthesized in [Step C];[단계 E] 상기 [단계 D]에서 합성된 C18 말단의 Alcohol기를 HCOOH 산으로 탈수하여 Ethylene을 형성하는 반응으로, Cyclohexanol기의 OH를 산화시킨 후;[Step E] After dehydrating the alcohol group at the C 18 terminal synthesized in [Step D] with HCOOH acid to form ethylene, the OH of the cyclohexanol group is oxidized;[단계 F] 상기 [단계 E]에서 Ethylene형성 후, Rochelle salt를 혼합하여 esters, carboxylic acids 및 amides의 OH의 Alcohol기로 환원하여;[Step F] After ethylene is formed in [Step E], Rochelle salt is mixed and reduced to the alcohol group of OH of esters, carboxylic acids and amides;[단계 G] 상기 [단계 F]에서 생성된 C17 알코올은 선택 산화반응하여 Aldehyde의 생성하며; [Step G] The C 17 alcohol produced in [Step F] undergoes selective oxidation to produce Aldehyde;[단계 H] Grignard 반응을 통해 Ketone을 Methyl기로 알킬화하는 반응을 유도하는 단계 및 [단계 I] Hydro Oxidation반응을 유도하는 단계;[Step H] Inducing a reaction of alkylating a ketone with a methyl group through the Grignard reaction and [Step I] Inducing a Hydro Oxidation reaction;[단계 J] Aldehyde 또는 ketone을 RO group으로 C=C 커플링 반응을 유도하는 단계;[Step J] Inducing a C = C coupling reaction with Aldehyde or ketone as an RO group;[단계 K] Ester기를 LiAlH4 환원제로 환원하여 Alcohol기를 형성한 후;[Step K] After reducing the ester group with a LiAlH4 reducing agent to form an alcohol group;[단계 L] Alcohol기를 9-cis Phosphonium salt로 치환하는 반응을 유도하며,[Step L] Inducing a reaction to replace the alcohol group with 9-cis Phosphonium salt,[단계 M] β-C15 aldehyde와 3-Methyl-2-butenal을 Knoevenagel condensation의 반응을 유도하여 All-trans retinal을 합성하는 단계로 이루어지는 것을 특징으로 하는 Potassium retinoate 합성방법[Step M] Potassium retinoate synthesis method comprising the step of synthesizing all-trans retinal by inducing a reaction of Knoevenagel condensation between β-C15 aldehyde and 3-Methyl-2-butenal
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