WO2018221820A1 - Method for assessing immunity and providing information on whether or not the onset of cancer has begun by utilizing difference in immune cell distribution between peripheral blood of colorectal cancer patient and normal person, and diagnostic kit using same - Google Patents

Method for assessing immunity and providing information on whether or not the onset of cancer has begun by utilizing difference in immune cell distribution between peripheral blood of colorectal cancer patient and normal person, and diagnostic kit using same Download PDF

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WO2018221820A1
WO2018221820A1 PCT/KR2018/000505 KR2018000505W WO2018221820A1 WO 2018221820 A1 WO2018221820 A1 WO 2018221820A1 KR 2018000505 W KR2018000505 W KR 2018000505W WO 2018221820 A1 WO2018221820 A1 WO 2018221820A1
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cells
value
ctls
cancer
patients
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French (fr)
Korean (ko)
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이종균
최중범
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이종균
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    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/574Immunoassay; Biospecific binding assay; Materials therefor for cancer
    • G01N33/57484Immunoassay; Biospecific binding assay; Materials therefor for cancer involving compounds serving as markers for tumor, cancer, neoplasia, e.g. cellular determinants, receptors, heat shock/stress proteins, A-protein, oligosaccharides, metabolites
    • G01N33/57496Immunoassay; Biospecific binding assay; Materials therefor for cancer involving compounds serving as markers for tumor, cancer, neoplasia, e.g. cellular determinants, receptors, heat shock/stress proteins, A-protein, oligosaccharides, metabolites involving intracellular compounds
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00Investigating characteristics of particles; Investigating permeability, pore-volume or surface-area of porous materials
    • G01N15/10Investigating individual particles
    • G01N15/14Optical investigation techniques, e.g. flow cytometry
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00Investigating characteristics of particles; Investigating permeability, pore-volume or surface-area of porous materials
    • G01N15/10Investigating individual particles
    • G01N15/14Optical investigation techniques, e.g. flow cytometry
    • G01N15/149Optical investigation techniques, e.g. flow cytometry specially adapted for sorting particles, e.g. by their size or optical properties
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • G01N33/56966Animal cells
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/574Immunoassay; Biospecific binding assay; Materials therefor for cancer
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/58Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/58Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
    • G01N33/582Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00Investigating characteristics of particles; Investigating permeability, pore-volume or surface-area of porous materials
    • G01N15/10Investigating individual particles
    • G01N15/14Optical investigation techniques, e.g. flow cytometry
    • G01N2015/1486Counting the particles
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2800/00Detection or diagnosis of diseases
    • G01N2800/70Mechanisms involved in disease identification
    • G01N2800/7023(Hyper)proliferation
    • G01N2800/7028Cancer

Definitions

  • the onset was performed by assessing and evaluating peripheral blood immunity of cancer patients and colorectal cancer, including colorectal cancer, and finding markers that differ significantly between the two groups, and creating and applying a binary logistic regression algorithm based on a combination of these. To diagnose and provide criteria regarding immunotherapy.
  • Immunity is not determined by one factor, but by the net effect of various factors, such as the immune cells and proteins that make up the immune system. Therefore, the personal immunity (Personal immunity) is inevitably different and will change from time to time. This means that individualized immunotherapy requires tailored personal immunotherapy based on different immunity. In general, treatment or therapy is a process in which diagnosis of a disease is preceded by a diagnosis and then a treatment is determined. Immune diagnosis is also possible before the immunotherapy (Immune diagnosis) can be treated accordingly, most of the immunotherapy is carried out without accurate immunodiagnosis. This is because, as mentioned above, the individual's immunity is so complex that no methodological criteria or evidence for assessing and diagnosing it have been established.
  • An object of the present invention is to find markers that show differences in colorectal cancer patients and normal people among immune cells constituting peripheral blood immunity for diagnosing cancer immunity.
  • an object of the present invention is to establish a statistical algorithm through a combination of these and based on this individual cells by simply and easily measuring the cell activity of natural killer cells without counting the number of natural killer cells (NK cells) using a cell counter To diagnose the immune activity of the immune system is to provide.
  • NK cells natural killer cells
  • a method for evaluating the immunity of peripheral blood using the difference in the distribution of immune cells in peripheral blood of a colorectal cancer patient and a normal person and using the same to provide information on the presence or absence of colorectal cancer (A) peripheral blood immunity Classifying lymphocytes, monocytes, and granulocytes by analyzing the cellular size and wrinkles of the cells; (B) analyzing the distribution of immune cells in peripheral blood of cancer patients and normal persons by staining the markers of the three types of immune cells with at least one antibody combination; (C) determining a combination of differences in cancer markers and normal persons with statistically significant result values of the marker markers in the two cancer patients and normal populations so as to determine whether cancer has occurred; And (D) diagnosing the presence of colorectal cancer by measuring immunity per unit blood without counting natural killer cells using a flow cytometer or a cell counter using the label marker.
  • a computer readable recording medium having recorded thereon a computer program for executing the method.
  • a diagnostic kit for providing information on the presence of colorectal cancer by the method is provided.
  • a significant marker may be selected from immune cells contained in a blood sample, and analyzed using a flow cytometer to diagnose cancer immunity through a regression analysis algorithm.
  • This has the advantage of being very simple, quick to inspect, significant cost savings and sufficient accuracy compared to being overhauled in a preventive manner.
  • the reliability of the test can be improved by increasing reproducibility and stability, compared to an ELISA that measures and diagnoses a known tumor biomarker in blood.
  • FIG. 1 is a view for explaining the cell phenotype for NKC analysis according to an embodiment of the present invention.
  • Figure 2 is a diagram for explaining the cell phenotype for Th1 / Th2 analysis according to an embodiment of the present invention.
  • Figure 3 is a view for explaining the cell phenotype for analysis of Myeloid Derived Stem Cells (MDSCs) according to an embodiment of the present invention.
  • MDSCs Myeloid Derived Stem Cells
  • Figure 4 is a view for explaining the cell phenotype for the analysis of Regulatory T cells (Tregs) according to an embodiment of the present invention.
  • CTLs cytotoxic T cells
  • Figure 6 is a view for explaining the CD279 + TIGIT + in CTLs cell phenotype for Exhausted T cells (ETc) analysis according to an embodiment of the present invention.
  • FIG. 7 is a diagram illustrating a cell phenotype for Immune checkpoint (ICP) analysis according to a preferred embodiment of the present invention.
  • FIG. 8 is a view for explaining the CD3- ⁇ TCR + cell phenotype for Gamma-delta T cells (GDT) analysis according to an embodiment of the present invention.
  • FIG. 10 is a view showing a model for providing cancer immunity in three stages of E1 E2 E3 using two E score cut values according to an embodiment of the present invention.
  • Cell analysis in the present invention basically used a flow cytometer (Flow cytometer), the following six kinds of immune cells (WBC, Lymphocytes, Neutrophils, Monocytes, Basophils, Eosinophils) included in the white blood cell subtype (WBCS) was analyzed using an automatic hematology analyzer.
  • WBC flow cytometer
  • the present invention is based on the marker markers expressed in the nine kinds of immune cell populations in the blood of patients and normal people before colorectal cancer surgery, the distribution of the immune cells for each marker marker (%) and the number of cells (cells) / ⁇ L) and its ratio (Ratio), which can be classified into the following categories by the function and analysis method of immune cells.
  • NK cells 1) NK cells (NKC)
  • MDSCs Myeloid Derived Stem Cells
  • CTLs Cytotoxic T cells
  • the present invention classifies and organizes major cellular immune markers into significant groups.
  • the selected markers actually showed significant differences in expression levels between colorectal cancer patients and two normal groups even in peripheral blood immunity units and were useful as diagnostic markers.
  • statistically significant markers were actually confirmed by the present patients, these markers were single items that showed sufficient sensitivity and specificity to diagnose or distinguish colon cancer patients from normal individuals.
  • the algorithm was developed.
  • the mathematical model used in the present invention is based on binary logistic regression.
  • NK cells NK cells
  • Th1Th2 Th1Th2
  • MDSCs Myeloid Derived Stem Cells
  • Tregs Regulatory T cells
  • CTLs Cytotoxic T cells
  • Ec Exhausted T cells
  • ICP Immune checkpoint
  • GDT Gamma-delta T cells
  • the kinds of fluorescence used in the invention are seven kinds of FITC, Alexa Fluor 488, PE, PE-Cy5, PE-Cy7, PerCP, and APC.
  • Channel is the detector channel type of the flow cytometer
  • Tandem-dye is the type of fluorescence attached to the antibody
  • Marker is the type of marker marker
  • Marker location is the location of each marker. As described below, there may be a difference in the experimental method.
  • NK cells Channel Tandem-dye Marker Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD3 surface BD 555339 6125658 0.5 FL2 PE CD56 surface BD 555516 6054620 2.5 FL3 PE-Cy7 CD314 surface BD 562365 6140911 2.5 FL4 APC CD158b surface BioLegend 312612 B210467 0.5
  • Th1Th2 Channel Tandem-dye Target Marker location Distributor Catalog # Lot # Volume / test FL1 Alexa Fluor488 CD183 surface BD 558047 6155849 0.5 FL2 PE CD194 surface BD 551120 5107877 0.5 FL3 PE-Cy5 CD4 surface BD 555348 5037589 0.5 FL4 APC CD196 surface BD 560619 5135834 0.15
  • Regulatory T cells Channel Tandem-dye Target Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD4 surface BD 555346 5097644 0.5 FL2 PE CD25 surface BD 555432 6040885 2.5 FL3 PE-Cy7 CD152 intra BD 555854 5142830 2.5 FL4 APC CD279 surface BD 558694 6154800 2.5
  • Cytotoxic T cells Channel Tandem-dye Target Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD3 surface BD 555339 6125658 0.5 FL2 PE CD25 surface BD 555432 6040885 2.5 FL3 PE-Cy7 CD152 intra BD 555854 5142830 2.5 FL4 APC CD279 surface BD 558694 6154800 2.5
  • Exhausted T cells Channel Tandem-dye Target Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD3 surface BD 555339 6125658 0.5 FL2 PE TIGIT Surface eBioseience 12-9500-42 4310012 2.5 FL3 PerCP CD8 Surface eBioseience 46-0087-41 E10832-1634 2.5 FL4 APC CD279 Surface BD 558694 6154800 2.5
  • Immune checkpoint Channel Tandem-dye marker Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD3 Surface BD 555339 6125658 0.5 FL2 PE CD366 Intra BD 563422 5082811 One FL3 PerCP CD272 Intra R & D systems FAB3354C ABCC212071 One FL4 APC CD223 intra R & D systems FAB23193A ADXM0116041 2.5
  • Gamma-delta T cells Channel Tandem-dye marker Marker location Distributor Catalog # Lot # Volume / test FL1 FITC CD3 Surface BD 555339 6125658 0.5 FL2 PE ⁇ TCR surface BD 555717 5267944
  • the basic staining method was carried out as follows.
  • each antibody Dispense the volume per test (volume / test) of each antibody to be stained into a microcentrifuge tube of 1.8 mL volume using a micro pipette.
  • the combined volume of each antibody is prepared to be 10 ⁇ L per test.
  • the preparation of the antibody varies depending on whether the marker location to be stained is all the surface of the membrane or the combination of the surface and the cytoplasm. The basic staining is only the surface marker.
  • the cells are stained by combining antibodies for staining, fixation of cells, and then prepared by staining intracellular markers.
  • NK cells consisting of a combination of surface membranes for 10 tests (10 people), 5 ⁇ L (0.5 ⁇ L x 10 tests) of FITC mouse anti-human CD3 IgGs. ), 25 ⁇ L (2.5 ⁇ L ⁇ 10 tests) of PE mouse anti-human CD56 IgGs, 25 ⁇ L (2.5 ⁇ L ⁇ 10 tests) of PE-Cy7 mouse anti-human CD314 IgGs, 5 ⁇ L (0.5 ⁇ L of APC mouse anti-human CD158b IgG) x 10 tests) were put into each microcentrifuge tube to prepare 60 ⁇ L. Then, 40 ⁇ L of PBS (Phosphate-buffered saline) was added to the tube to make a final volume of 100 ⁇ L of antibody combination.
  • PBS Phosphate-buffered saline
  • Tregs consisting of a combination of the surface and the cytoplasm of the marker with 10 tests (10 persons).
  • the staining antibody of NK cells (NKC), Th1Th2 (TH), Myeloid Derived Stem Cells (MDSCs), Exhausted T cells (ETc), Gamma-delta T cells (GDT) consisting of a combination of cell membranes
  • NTC NK cells
  • Th1Th2 Th1Th2
  • MDSCs Myeloid Derived Stem Cells
  • Ec Exhausted T cells
  • GDT Gamma-delta T cells
  • Tums Regulatory T cells
  • CTLs Cytotoxic T cells
  • ICP Immune checkpoint
  • Constituent volume ratio of each antibody is as indicated through the volume / test ratio of Table 1 to Table 8, the antibody combination volume can be prepared by the same method as the above example.
  • the results obtained through flow cytometry are all obtained in the distribution (%), and the number of cells (cells / ⁇ L) according to each distribution is multiplied by the distribution using the differential of the white blood cells obtained using the automatic blood cell analyzer. It can be calculated as
  • FIGS. 1 to 8 The results of analyzing the markers of immune cells using the flow cytometer through the above experimental procedure are shown in FIGS. 1 to 8, and the statistical results of analyzing the colorectal cancer patients and normal persons are shown in Tables 9 to 18.
  • FIGS. 1 to 8 and 10 are rotated 90 degrees in the counterclockwise direction, it will be described below that the above drawings are based on the rotated 90 degrees in the clockwise direction.
  • Figure 1 is for the NKC analysis according to a preferred embodiment of the present invention 1 CD3-CD56 +, 2 CD3 + CD56 +, 3 CD314 + CD158b- in CD3-CD56 + cells (NK cells), 4 CD314-CD158b + in NK cells, 5 It provides six cell phenotypes: CD314-CD158b + in NK cells, 6 CD158b + in CD3 + CD56- (T cells).
  • cells when analyzing blood with a flow cytometer, cells can be classified into X-axis as FSC-H (relative size of cells) and Y-axis as SSC-H (cell wrinkles).
  • Blood immune cells can be classified into lymphocytes, monocytes, and granulocytes according to cell size and extent of wrinkles. The analysis was performed mainly on the lymphocytes (Lymphocytes) in the center of the graph, and this part was stained using an antibody attached to each marker.
  • the X-axis shows the presence of CD3 staining and the Y-axis shows the presence of CD56 staining.
  • the cross-shaped solid line inside the graph shows CD3- + on the left and CD56 + on the bottom.
  • the CD3-CD56 + part was designated as Q1, the CD3 + CD56 + part as Q2, the CD3 + CD56- part as Q3, and the CD3-CD56- part as Q4.
  • the lower left graph cells of the Q1 region were again classified according to the presence or absence of the CD314 and CD158 markers using antibodies, and the graph expression method was as described above.
  • the cells of the Q3 region of the upper right graph were again classified according to the presence or absence of the CD314 and CD158 markers using antibodies, and the expression method of the graph was as described above.
  • Figure 2 provides four cell phenotypes, such as 1 Th1, 2 Th2, 3 Th17, 4 Th1 / Th2 for Th1 / Th2 analysis according to a preferred embodiment of the present invention.
  • Figure 2 also shows the results of the analysis by using the cells of the lymphocyte site of Figure 1 by sorting the presence or absence of the staining of each marker CD4, CD183, CD194, CD196 sequentially or simultaneously, graph
  • the reaction between the X-axis and the Y-axis antibody was expressed as a numerical value, and each region was subdivided by a solid line in the graph.
  • the detailed method is as described with reference to FIG. 1.
  • the distribution of Th1, Th2, Th17 is obtained by the following equation (1).
  • Figure 3 provides a cell phenotype for analysis of Myeloid Derived Stem Cells (MDSCs) according to a preferred embodiment of the present invention.
  • MDSCs Myeloid Derived Stem Cells
  • Figure 4 provides three cell phenotypes, such as 1 CD4 + CD279 +, 2 CD4 + CD25 +, 3 CD4 + CD152 + for the analysis of Regulatory T cells (Tregs) according to an embodiment of the present invention. Since the representation of the graph shown through FIGS. 4 to 8 is the same as that described with reference to FIG. 1, a detailed description thereof will be omitted.
  • Figure 5 provides two cell phenotypes, such as 1 CD152 + in CTLs, 2 CD279 + in CTLs for the analysis of Cytotoxic T cells (CTLs) according to a preferred embodiment of the present invention.
  • CTLs Cytotoxic T cells
  • Figure 6 provides a CD279 + TIGIT + in CTLs cell phenotype for Exhausted T cells (ETc) analysis according to a preferred embodiment of the present invention.
  • FIG. 7 shows 1 CD3 + CD366 +, 2 CD3-CD366 +, 3 CD366 + in lymphocytes, 4 CD3 + CD272 +, 5 CD3-CD272 +, 6 CD272 + in lymphocytes, for Immune checkpoint (ICP) analysis according to a preferred embodiment of the present invention.
  • GDT Gamma-delta T cells
  • Table 9 is a table showing the average distribution and cell number of peripheral blood NKC of colorectal cancer patients and normal people.
  • Table 10 is a table showing the average distribution and cell number of peripheral blood TH of colorectal cancer patients and normal people.
  • Table 11 is a table showing the average distribution and cell number of peripheral blood MDSCs of colorectal cancer patients and normal people.
  • Table 12 is a table showing the average distribution and cell number of peripheral blood Tregs of colorectal cancer patients and normal people.
  • Table 13 is a table showing the average distribution and cell number of peripheral blood CTLs of colorectal cancer patients and normal people.
  • Table 14 is a table showing the average distribution and cell number of peripheral blood ETc of colorectal cancer patients and normal people.
  • Table 15 is a table showing the average distribution and cell number of peripheral blood ICP of colorectal cancer patients and normal people.
  • Table 16 is a table showing the average distribution and cell number of peripheral blood GDT of colorectal cancer patients and normal people.
  • Table 17 is a table showing the average distribution and cell number of peripheral blood WBCS of colorectal cancer patients and normal people.
  • Table 18 is a table showing the ratio of peripheral blood immune cells of colorectal cancer patients and normal people.
  • N is the number of experimental groups
  • Mean is the mean value
  • SD is the standard deviation
  • SE is the standard error
  • 95% Mean is calculated using only 95% by discarding 2.5% of the results at both ends of the group to reduce the error rate
  • the mean value, Median means the median value.
  • NKC CD3-CD56 + (NK)% Control 132 16.50 8.08 0.70 16.00 14.82 0.183 Patients 98 17.79 10.05 1.28 17.20 16.21 NKC CD3 + CD56 +% Control 132 5.00 4.17 0.36 4.45 3.77 0.065 Patients 98 3.67 2.50 0.32 3.49 3.00 NKC CD3-CD56 + cells / ⁇ L Control 132 342 198 17 325 313 0.284 Patients 98 345 206 26 330 304 NKC CD3 + CD56 + (NKT) cells / ⁇ L Control 132 108 109 10 93 76 0.129 Patients 98 76 64 8 70 56 NKC CD314 + CD158b - % in NK cells Control 132 56.19 16.45 1.48 56.60 57.14 0.030 Patients 98 47.04 18.02 2.29 47.12 49.41 NKC CD314 + CD158b- cells / ⁇ L in NK
  • peripheral blood immune cells of 132 normal and 98 patients were analyzed.
  • markers of immune cells showing a difference between the two groups at the significance level P value ⁇ 0.05 were found.
  • the bold and italicized parts of the table are significant markers of immune cells.
  • the difference in mean value between the two groups was analyzed using the statistical program SPSS. As the population follows the normal distribution and satisfies the equivariance condition, the statistical difference of the mean value was used by the T test student's t - test.
  • cancer colony-specific immune cell markers can be used to accurately classify colorectal cancer patients and normal persons, and cancer diagnosis through immunological tests may be possible.
  • a binary logistic regression model formulated to express the difference in peripheral blood immunity between colorectal cancer patients and normal people was applied to the diagnosis of cancer.
  • colorectal cancer patients and normal subjects were converted to 1 and 0, respectively, as dependent variables, and immune cell marker result values were used as independent variables as shown in Tables 9 to 18 above.
  • the items that best distinguish the two groups of 132 normal and 98 colorectal cancer patients were selected.
  • Table 19 above shows coefficients (B) and constants in a regression analysis model using 23 immune cell markers.
  • B is a B estimate and corresponds to a coefficient value in a regression model.
  • SE is the standard error value for the B estimate
  • Wald is the square of (the standard error value of the B estimate / B estimate).
  • Df means degrees of freedom
  • Sig Means significance, and the significance of each item in the model
  • Exp (B) means e B with natural logarithm of B , and each independent variable increases by 1. This is a statistic that indicates how many times the probability of belonging to a group having an internal value of 1 is greater than that of a group having an internal value of 0.
  • CD4 +% in CTLs 23.317-0.403 (CD4 +%)-0.468 (CD3 + CD8 +%) + 0.961 (CD4 + CD279 +%) + 0.646 (CD4 + CD25 +%) + 0.001 (CD4 + CD152 +%)-0.093 (CD279 +% in CTLs) +0.131 (CD152 +% in CTLs) +0.623 (CD3 + CD272 +%) + 0.479 (CD3 + CD223 +)-0.221 (Lymphocytes%)-0.174 (Neutrophils%)-1.056 (NLR) +4.576 (CTLs / Treg) -0.011 (CD314 + CD158b-% in NK cells) +0.739 (CD314-CD158b +% in NK cells) -0.140 (CD314 + in T cells) +0.450 (Th1%) + 0.074 (Th2%)-7.516 (TH1 / TH2) -0.001 (MDSCs cells / ⁇ L)+0.495 (monocytes%)
  • the result value can be largely influenced by the higher weight item, and the data for more factors are required. May act as an inhibitor in testing. Therefore, more preferably, the following logistic regression function consisting of a combination of 11 factors can be used.
  • each result value and the coefficient value are multiplied and summed together with a constant value to obtain a Logit (P) value.
  • Logit (P) a linear equation model value
  • Equation 3 the predictive Y value of colorectal cancer patients and normal subjects is e P Is obtained by denominator 1-e P as the denominator, and the probability Y value is named E score in the present invention.
  • Table 20 shows sensitivity, specificity, and Youden index values according to the E score result value.
  • cut values for sensitivity and specificity of the E score result value can be arbitrarily adjusted.
  • the cut value is 0.098
  • the sensitivity is 100% and the specificity is 78.4%.
  • the cut value is 0.684
  • the sensitivity is 83.1% and the specificity is 100%. This indicates that all of them are normal at E score ⁇ 0.098 and similarly diagnosed as colorectal cancer patients at 0.684 ⁇ E score.
  • FIG. 10 is a diagram showing a model for providing cancer immunity in three steps of E1 E2 E3 using two E score cut values according to an embodiment of the present invention.
  • the cut value of the E score may be divided into three sections based on 0.098 and 0.684, and the cancer immunity according to the E score result may be classified into three stages.
  • Section E socre ⁇ 0.098 is normal and named E1.
  • Section 0.098 ⁇ E score ⁇ 0.684 is a high-risk cancer group and is named E2.
  • 0.684 ⁇ E score is colorectal cancer patients.
  • a patient before surgery for colorectal cancer is diagnosed as a normal person (E1), a high risk group of cancer (E2), and a colorectal cancer patient (E3) using, for example, peripheral blood immunity.
  • E1 normal person
  • E2 high risk group of cancer
  • E3 colorectal cancer patient
  • the regression model made using 23 or 11 immune cell markers can maximize the usefulness of cancer diagnosis by increasing the sensitivity and specificity by using newly discovered markers, and the 23 or 11 proposed in the present invention.
  • New combinations, rather than branch items, can also be used to diagnose and regress models.

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Abstract

Provided according to the present invention is a method for assessing immunity of peripheral blood and providing information on whether or not the onset of colorectal cancer has begun by utilizing a difference in immune cell distribution between peripheral blood of colorectal cancer patients and normal persons, the method comprising the steps of: (A) analyzing peripheral blood immune cells for cell size and wrinkle degree to classify the cells into lymphocytes, monocytes, and granulocytes; (B) staining a labeling marker of the three kinds of immune cells with at least one antibody combination to analyze the distribution of immune cells in peripheral bloods of cancer patients and normal persons; (C) discriminating sets in which meaningful result values of the labeling marker are different between the two groups, cancer patients and normal persons, with statistical significance, so as to discriminate whether or not the onset of cancer has begun among cancer patients and normal persons; and (D) measuring immunity per unit of blood by means of the labeling marker to diagnose whether or not the onset of colorectal cancer has begun, without counting natural killer cells with a flow cytometer or a cell counter.

Description

대장 직장암 환자와 정상인의 말초혈액 내 면역세포의 분포 차이를 이용하여 면역력을 평가하고 암 발병 유무에 대한 정보를 제공하는 방법 및 이를 이용한 진단키트Method for evaluating immunity and providing information on cancer development using differences in distribution of immune cells in peripheral blood of colorectal cancer patients and normal people, and diagnostic kit using the same
본 발병은 대장 직장암을 포함한 암 환자와 정상인의 말초혈액 면역력을 측정 평가하고 두 그룹 사이에서 현저히 차이가 나는 마커를 찾아내고 이들의 조합에 의한 이분형 로지스틱 회귀분석 알고리즘을 생성, 적용함으로써 대장 직장암 환자를 진단하고 면역 치료에 관한 기준을 제공한다.The onset was performed by assessing and evaluating peripheral blood immunity of cancer patients and colorectal cancer, including colorectal cancer, and finding markers that differ significantly between the two groups, and creating and applying a binary logistic regression algorithm based on a combination of these. To diagnose and provide criteria regarding immunotherapy.
면역력(Immunity)은 암의 발병과 진행 및 전이 과정에 이르는 모든 과정에서 매우 밀접한 관계를 가지고 있다. 실제로 지금까지 연구된 많은 문헌을 통해 정도의 차이는 있지만 대부분 암 환자의 면역력이 현저하게 저하(Low) 또는 손상(Impaired)되어 있다고 보고되어 있는데(Olivera J. Finn, Cancer Immunology, N Engl J Med, 2008:358:2704-15) 이러한 연구 결과는 기존의 전통적인 암 치료 방법 (수술 및 항암요법)에서 탈피하여 새로운 치료 방법을 모색하는 계기가 되었으며 면역치료법(Immunotherapy)이라는 신개념 치료 방법의 등장을 이끌어 내게 되었다. 이에 따라 다양한 형태의 면역 치료법이 연구 개발되어 임상에서 실제 환자에 적용되고 있으며, 일부 면역 치료법은 가시적인 성과를 보이기도 한다.Immunity is intimately involved in everything from cancer to cancer progression and progression and metastasis. Indeed, many of the literatures studied so far report that, although there are some differences, the immunity of most cancer patients is markedly low or impaired (Olivera J. Finn, Cancer Immunology, N Engl J Med, 2008: 358: 2704-15) These findings have led to the exploration of new treatments away from traditional cancer treatments (surgery and chemotherapy), which has led to the emergence of a new concept of treatment called immunotherapy. It became. Accordingly, various forms of immunotherapy are being researched and applied to clinical patients, and some immunotherapies have shown tangible results.
면역력이라고 하는 것은 하나의 요소에 의해 결정되는 것이 아니고 면역 시스템(Immune system)을 이루고 있는 다양한 세포나 단백질(Immune cells and proteins) 등과 같은 여러 요인의 합(Net effect)에 의해 결정된다. 따라서 개인 면역력(Personal immunity)은 서로 다를 수밖에 없으며 시시각각 변화하게 된다. 이것은 면역치료에 있어 개인마다 서로 다른 면역력에 근거한 맞춤형 치료(Tailored personal immunotherapy)가 필요하다는 것을 의미한다. 일반적으로 치료(Treatment or Therapy)라고 하는 것은 어떠한 질병의 진단(Diagnosis)이 선행된 다음 그에 맞는 치료법이 결정되는 과정을 거치게 된다. 면역치료 역시 면역진단이(Immune diagnosis) 선행되어야만 그에 맞는 치료가 가능한데 대부분의 면역치료는 정확한 면역진단 없이 시행되고 있는 것이 현실이다. 이것은 앞서 언급한 바와 같이 개인의 면역력이 굉장히 복잡하여 면역력을 평가하고 진단하는 방법론적인 기준이나 근거가 정립되어 있지 않기 때문이다.Immunity is not determined by one factor, but by the net effect of various factors, such as the immune cells and proteins that make up the immune system. Therefore, the personal immunity (Personal immunity) is inevitably different and will change from time to time. This means that individualized immunotherapy requires tailored personal immunotherapy based on different immunity. In general, treatment or therapy is a process in which diagnosis of a disease is preceded by a diagnosis and then a treatment is determined. Immune diagnosis is also possible before the immunotherapy (Immune diagnosis) can be treated accordingly, most of the immunotherapy is carried out without accurate immunodiagnosis. This is because, as mentioned above, the individual's immunity is so complex that no methodological criteria or evidence for assessing and diagnosing it have been established.
암을 진단하고 또한 예방하는 차원에서 가장 보편화된 방법은 영상의학적인 모니터링과 조직학적인 분석에 기초하는 것이다. 암을 예방하기 위한 정밀 검진은 매우 중요하지만 이는 시간과 비용을 요하는 과정으로 바쁜 현대인의 일상생활을 고려할 때 보편화되기 어렵다. 때문에 보다 간편하고 정확한 예방법을 찾아내기 위한 다양한 진단법이 연구되고 있다. 일반적으로 가장 손쉬운 방법은 주로 ELISA와 같은 방법을 이용하여 혈액의 종양 표지 마커(Cancer marker)를 찾아내어 암을 예측하는 것이다. 이는 혈액 샘플의 채취가 간단하고 ELISA 기법이 어렵지 않기 때문에 많이 시도되고 있는 방법 가운데 하나이다.The most common method for diagnosing and preventing cancer is based on radiological monitoring and histological analysis. Although screening to prevent cancer is very important, it is a time-consuming and costly process that is difficult to take into account when considering the daily lives of busy modern people. Therefore, various diagnostic methods have been researched to find simpler and more accurate preventive methods. In general, the easiest way is to find cancer markers in the blood using a method such as ELISA to predict cancer. This is one of the many attempts because blood sampling is simple and ELISA is not difficult.
또한, 혈액시료(Blood sample) 안에는 단백질 이외에도 거의 대부분의 면역세포군(Immune cells)과 그의 아형 세포들(Immune cell subtypes)이 존재한다. 이러한 면역세포의 분석은 주로 유세포분석기(Flow cytometer)를 이용하여 이루어진다. 유세포분석기를 이용하면 원하는 면역세포의 마커(Marker)를 형광 염색하고 유세포분석기법(FACS; Fluorescence-Activated Cell Sorting)을 이용하여 매우 간단하고 재현성 있게 면역세포 분석이 수행될 수 있다.In addition, in blood samples, in addition to proteins, almost all immune cells and their subtypes are present. Analysis of such immune cells is mainly performed using a flow cytometer. Using a flow cytometer, fluorescent markers of desired immune cells can be fluorescently stained, and immunocyte analysis can be performed very simply and reproducibly using fluorescence-activated cell sorting (FACS).
본 발명의 목적은 암 면역력 진단을 위해 말초혈액 면역력(Peripheral blood immunity)을 구성하는 면역세포 가운데 대장 직장암 환자와 정상인에 있어 차이를 보이는 마커를 찾아내는 것이다.An object of the present invention is to find markers that show differences in colorectal cancer patients and normal people among immune cells constituting peripheral blood immunity for diagnosing cancer immunity.
또한, 본 발명의 목적은 이들의 조합을 통한 통계학적인 알고리즘을 정립하고 이를 기반으로 세포 계수기를 이용한 자연살해 세포(NK cell)의 세포수 계수 없이도 간편하고 손쉽게 자연살해 세포의 세포활성도를 측정하여 개체의 면역 활성을 진단하고 그에 맞는 면역 치료법을 제공하는 것이다.In addition, an object of the present invention is to establish a statistical algorithm through a combination of these and based on this individual cells by simply and easily measuring the cell activity of natural killer cells without counting the number of natural killer cells (NK cells) using a cell counter To diagnose the immune activity of the immune system is to provide.
본 발명에 의하면 대장 직장암 환자와 정상인의 말초혈액 내 면역세포의 분포 차이를 이용하여 말초혈액의 면역력을 평가하고 이를 이용해 대장 직장암 발병 유무에 대한 정보를 제공하는 방법에 있어서, (A) 말초혈액 면역세포의 중 세포 크기 및 주름진 정도를 분석해 림프구세포(lymphocytes), 단핵구세포(monocytes), 및 과립구(granulocytes)를 분류하는 단계; (B) 적어도 하나의 항체 조합으로 상기 세 종류의 면역세포의 표지 마커를 염색하여 암환자와 정상인의 말초혈액 내 면역세포의 분포를 분석하는 단계; (C) 암환자와 정상인 사이에서 암 발생 유무를 판별할 수 있도록 암환자와 정상인 두 집단에서 유의미한 표지 마커의 결과 값이 통계적 유의성을 보이면서 차이가 나는 조합을 판별하는 단계; 및 (D) 상기 표지 마커를 이용해 유세포분석기나 세포 계수기 등을 이용한 자연살해 세포의 계수 없이도 단위 혈액당 면역력을 측정하여 대장 직장암 발병 유무를 진단하는 단계를 포함하는 방법이 제공된다.According to the present invention, a method for evaluating the immunity of peripheral blood using the difference in the distribution of immune cells in peripheral blood of a colorectal cancer patient and a normal person and using the same to provide information on the presence or absence of colorectal cancer, (A) peripheral blood immunity Classifying lymphocytes, monocytes, and granulocytes by analyzing the cellular size and wrinkles of the cells; (B) analyzing the distribution of immune cells in peripheral blood of cancer patients and normal persons by staining the markers of the three types of immune cells with at least one antibody combination; (C) determining a combination of differences in cancer markers and normal persons with statistically significant result values of the marker markers in the two cancer patients and normal populations so as to determine whether cancer has occurred; And (D) diagnosing the presence of colorectal cancer by measuring immunity per unit blood without counting natural killer cells using a flow cytometer or a cell counter using the label marker.
또한, 본 발명에 의하면 상기 방법을 실행하기 위한 컴퓨터 프로그램을 기록한 컴퓨터로 판독 가능한 기록 매체가 제공된다.According to the present invention, there is also provided a computer readable recording medium having recorded thereon a computer program for executing the method.
또한, 본 발명에 의하면 상기 방법에 의해 대장 직장암 발병 유무에 대한 정보를 제공하는 진단키트가 제공된다.In addition, according to the present invention there is provided a diagnostic kit for providing information on the presence of colorectal cancer by the method.
본 발명에 의하면 혈액시료(Blood sample) 내 함유된 면역세포들 중 유의미한 표지 마커를 선정할 수 있고, 이를 유세포분석기를 이용하여 분석하여 회귀분석 알고리즘을 통해 암 면역력을 진단할 수 있다. 이것은 예방적인 차원에서 정밀검사를 받는 것과 비교하여 매우 간단하고 검사 방법도 빠르며 상당한 비용을 절감할 수 있으며 충분한 정확성을 제공한다는 장점이 있다. 또한, 기존에 알려진 혈액 내 종양 표지자(Cancer biomarker)를 측정하여 진단하는 ELISA에 비해 재현성(Reproducibility)과 안정성(Stability)을 높여 검사의 신뢰도를 높일 수 있다는 장점이 있다.According to the present invention, a significant marker may be selected from immune cells contained in a blood sample, and analyzed using a flow cytometer to diagnose cancer immunity through a regression analysis algorithm. This has the advantage of being very simple, quick to inspect, significant cost savings and sufficient accuracy compared to being overhauled in a preventive manner. In addition, there is an advantage that the reliability of the test can be improved by increasing reproducibility and stability, compared to an ELISA that measures and diagnoses a known tumor biomarker in blood.
도 1은 본 발명의 바람직한 일 실시예에 따른 NKC분석을 위해 세포 표현형을 설명하기 위한 도면.1 is a view for explaining the cell phenotype for NKC analysis according to an embodiment of the present invention.
도 2는 본 발명의 바람직한 일 실시예에 따른 Th1/Th2 분석을 위해 세포 표현형을 설명하기 위한 도면.Figure 2 is a diagram for explaining the cell phenotype for Th1 / Th2 analysis according to an embodiment of the present invention.
도 3은 본 발명의 바람직한 일 실시예에 따른 Myeloid Derived Stem Cells(MDSCs) 분석을 위한 세포 표현형을 설명하기 위한 도면.Figure 3 is a view for explaining the cell phenotype for analysis of Myeloid Derived Stem Cells (MDSCs) according to an embodiment of the present invention.
도 4는 본 발명의 바람직한 일 실시예에 따른 Regulatory T cells(Tregs) 분석을 위해 세포 표현형을 설명하기 위한 도면.Figure 4 is a view for explaining the cell phenotype for the analysis of Regulatory T cells (Tregs) according to an embodiment of the present invention.
도 5는 본 발명의 바람직한 일 실시예에 따른 Cytotoxic T cells(CTLs) 분석을 위해 세포 표현형을 설명하기 위한 도면.5 is a diagram illustrating a cell phenotype for analysis of cytotoxic T cells (CTLs) according to an embodiment of the present invention.
도 6은 본 발명의 바람직한 일 실시예에 따른 Exhausted T cells(ETc) 분석을 위해 CD279+TIGIT+ in CTLs 세포 표현형을 설명하기 위한 도면.Figure 6 is a view for explaining the CD279 + TIGIT + in CTLs cell phenotype for Exhausted T cells (ETc) analysis according to an embodiment of the present invention.
도 7은 본 발명의 바람직한 일 실시예에 따른 Immune checkpoint(ICP) 분석을 위해 세포 표현형을 설명하기 위한 도면.7 is a diagram illustrating a cell phenotype for Immune checkpoint (ICP) analysis according to a preferred embodiment of the present invention.
도 8은 본 발명의 바람직한 일 실시예에 따른 Gamma-delta T cells(GDT) 분석을 위해 CD3-γδTCR+ 세포 표현형을 설명하기 위한 도면.8 is a view for explaining the CD3-γδ TCR + cell phenotype for Gamma-delta T cells (GDT) analysis according to an embodiment of the present invention.
도 9는 본 발명의 바람직한 일 실시예에 따른 E score를 이용하여 만든 Receiver operating characteristic curve.9 is a receiver operating characteristic curve made using the E score according to an embodiment of the present invention.
도 10은 본 발명의 바람직한 일 실시예에 따른 2개의 E score cut value를 이용하여 암 면역력을 E1 E2 E3의 3단계로 제공하는 모형을 도시한 도면.10 is a view showing a model for providing cancer immunity in three stages of E1 E2 E3 using two E score cut values according to an embodiment of the present invention.
후술하는 본 발명에 대한 상세한 설명은, 본 발명이 실시될 수 있는 특정 실시예의 예시로서 도시되는 첨부 도면을 참조한다. 이들 실시예는 당업자가 본 발명을 실시할 수 있기에 충분하도록 상세히 설명된다. 본 발명의 다양한 실시예는 서로 다르지만 상호 배타적일 필요는 없음이 이해되어야 한다. 예를 들어, 여기에 기재되어 있는 특정 실시예는 본 발명의 정신 및 범위를 벗어나지 않으면서 다른 실시예로 구현될 수 있다. 또한, 각각의 개시된 실시예 내의 개별 구성요소나 단계의 위치, 순서 또는 배치는 본 발명의 정신 및 범위를 벗어나지 않으면서 변경될 수 있음이 이해되어야 한다. 따라서, 후술하는 상세한 설명은 한정적인 의미로서 취하려는 것이 아니며, 본 발명의 범위는, 적절하게 설명된다면, 그 청구항들이 주장하는 것과 균등한 모든 범위와 더불어 첨부된 청구항에 의해서만 한정된다.DETAILED DESCRIPTION OF THE INVENTION The following detailed description of the invention refers to the accompanying drawings, which are shown by way of illustration of specific embodiments in which the invention may be practiced. These embodiments are described in sufficient detail to enable those skilled in the art to practice the invention. It should be understood that the various embodiments of the present invention are different but need not be mutually exclusive. For example, certain embodiments described herein can be embodied in other embodiments without departing from the spirit and scope of the invention. In addition, it is to be understood that the location, order, or arrangement of individual components or steps in each disclosed embodiment may be changed without departing from the spirit and scope of the invention. The following detailed description, therefore, is not to be taken in a limiting sense, and the scope of the present invention, if properly described, is defined only by the appended claims, along with the full range of equivalents to which such claims are entitled.
이하에서는, 본 발명이 속하는 기술분야에서 통상의 지식을 가진 자가 본 발명을 용이하게 실시할 수 있도록 하기 위하여, 본 발명의 바람직한 실시예들에 관하여 첨부된 도면을 참조하여 상세히 설명하기로 한다.DETAILED DESCRIPTION Hereinafter, exemplary embodiments of the present invention will be described in detail with reference to the accompanying drawings so that those skilled in the art can easily implement the present invention.
본 발명에서의 세포 분석은 기본적으로 유세포분석기(Flow cytometer)를 이용하였으며, White blood cell subtype(WBCS)에 포함되는 하기와 같은 6종의 면역세포(WBC, Lymphocytes, Neutrophils, Monocytes, Basophils, Eosinophils)는 자동혈구분석기(Automatic hematology analyzer)를 이용하여 분석하였다.Cell analysis in the present invention basically used a flow cytometer (Flow cytometer), the following six kinds of immune cells (WBC, Lymphocytes, Neutrophils, Monocytes, Basophils, Eosinophils) included in the white blood cell subtype (WBCS) Was analyzed using an automatic hematology analyzer.
본 발명은 대장 직장암 수술 전 환자와 정상인의 혈액에서 다음과 같이 9가지로 분류되는 면역 세포군에서 발현되는 표지 마커를 토대로 각각의 표지 마커에 대한 면역세포의 표현형을 분포도(%)와 세포 수(cells/μL) 및 그 비율(Ratio)로 표현하였으며, 이것은 면역세포의 기능 및 분석 방법적으로 다음과 같은 카테고리로 분류될 수 있다.The present invention is based on the marker markers expressed in the nine kinds of immune cell populations in the blood of patients and normal people before colorectal cancer surgery, the distribution of the immune cells for each marker marker (%) and the number of cells (cells) / μL) and its ratio (Ratio), which can be classified into the following categories by the function and analysis method of immune cells.
1) NK cells(NKC)1) NK cells (NKC)
2) Th1Th2(TH)2) Th1Th2 (TH)
3) Myeloid Derived Stem Cells(MDSCs)3) Myeloid Derived Stem Cells (MDSCs)
4) Regulatory T cells(Tregs)4) Regulatory T cells (Tregs)
5) Cytotoxic T cells(CTLs)5) Cytotoxic T cells (CTLs)
6) Exhausted T cells(ETc)6) Exhausted T cells (ETc)
7) Immune checkpoint(ICP)7) Immune checkpoint (ICP)
8) Gamma-delta T cells(GDT)8) Gamma-delta T cells (GDT)
9) White blood cell subtype(WBCS)9) White blood cell subtype (WBCS)
상기 9가지 면역 세포군은 무수히 많은 세포막(Cell surface) 및 세포질(Intracellular) 수용체 또는 신호 전달 물질을 지니고 있는데 이러한 세포 물질을 세포의 마커라 볼 수 있으며 이는 면역세포 고유의 기능을 결정짓는 역할을 하게 된다. 또한, 세포의 마커 가운데 일부는 그 기능과 발현 정도가 암의 발병 및 진행 과정과 매우 밀접한 관계를 가지고 있다. 실제로도 현재 면역치료의 주가 되는 것 가운데 하나는 면역세포의 마커를 통한 신호 전달을 증폭시키거나 차단함으로써 암세포의 증식을 억제하는 것이다(Katheleen M. Mahoney, Combination cancer immunotherapy and new immunomodulatory targets, 2015, Nat Rev Drug Discov).These nine immune cell populations have a myriad of cell surface and intracellular receptors or signal transduction materials, which can be regarded as markers of cells, which are responsible for determining the function of immune cells. . In addition, some of the cell markers are closely related to the onset and progression of cancer in terms of their function and expression. Indeed, one of the main factors in current immunotherapy is to inhibit cancer cell proliferation by amplifying or blocking signal transduction through markers of immune cells (Katheleen M. Mahoney, Combination cancer immunotherapy and new immunomodulatory targets, 2015, Nat Rev Drug Discov).
본 발명은 이러한 점에 착안하여 주요한 세포 면역 표지 마커를 유의미한 군으로 분류하고 정리하여 선별하였다. 또한, 선별된 마커가 실제로 말초혈액 면역력 단위에서도 대장 직장암 환자와 정상인 두 그룹 사이에서 의미 있는 발현 정도의 차이를 나타내며 진단 마커로서 유용성이 있는지를 직접 테스트하였다. 통계적으로 유의성이 확인된 마커들이 본 발병자들에 의해 실제 확인되었지만 이러한 마커들은 단일 항목으로서 대장 직장암 환자와 정상인을 진단하거나 구분 지을 수 있을 만큼의 충분한 민감도(Sensitivity)와 특이도(Specificity)를 나타내지는 않았다. 이에 대장 직장암 환자와 정상인의 두 그룹에 있어 통계적인 유의성을 보이는 마커들이 유의미한 정보를 제공할 수 있도록 이를 조합하고 두 그룹의 차이점을 수식으로 구분 지을 수 있는 알고리즘을 발명하게 되었다. 본 발명에 이용된 수식 모형은 이분형 로지스틱 회귀분석에 기초한 것이다. 본 발명을 통해 다양한 조합의 마커를 이용하여 다양한 회귀분석 모형을 얻을 수 있었으며, 대장 직장암 환자와 정상인을 진단하는데 80% 이상의 민감도와 특이도를 나타내어 말초혈액 면역력을 평가하고 암을 조기에 진단하는 기술이 가능하다는 것을 확인하게 되었다. 임상진단에 있어 어떠한 진단법이 유용하게 받아들여지기 위해서는 80% 이상의 민감도와 특이도를 가질 것이 통상적으로 요구된다.In light of this, the present invention classifies and organizes major cellular immune markers into significant groups. In addition, it was directly tested whether the selected markers actually showed significant differences in expression levels between colorectal cancer patients and two normal groups even in peripheral blood immunity units and were useful as diagnostic markers. Although statistically significant markers were actually confirmed by the present patients, these markers were single items that showed sufficient sensitivity and specificity to diagnose or distinguish colon cancer patients from normal individuals. Did. In order to provide meaningful information for markers showing statistical significance in the two groups of colorectal cancer patients and normal people, the algorithm was developed. The mathematical model used in the present invention is based on binary logistic regression. Through the present invention, various regression analysis models were obtained by using various combinations of markers, and a technique for evaluating peripheral blood immunity and early diagnosis of cancer by exhibiting sensitivity and specificity of more than 80% in diagnosing colorectal cancer patients and normal people. It was confirmed that this is possible. In clinical diagnosis, it is usually required to have a sensitivity and specificity of 80% or more in order to be usefully accepted.
이하에서는 다양한 조합의 마커를 이용하여 80% 이상의 민감도와 특이도를 가지도록 대장 직장암 환자와 정상인을 진단할 수 있는 방법에 대하여 실시예와 이로부터 도출된 데이터를 기반으로 보다 상세히 설명한다.Hereinafter, a method for diagnosing a colorectal cancer patient and a normal person to have a sensitivity and specificity of 80% or more using various combinations of markers will be described in more detail based on Examples and data derived therefrom.
말초혈액 면역세포의 형광염색을 통한 Through fluorescent staining of peripheral blood immune cells 유세포분석Flow cytometry
대장 직장암 환자 98명 및 정상인 132명으로부터 각각 말초혈액 5 cc(5 ㎖)를 채혈하여 혈액 응고를 방지하기 위한 헤파린-EDTA 튜브(Heparin-EDTA tube)에 담아 실온 상태에서 분석실로 운반해 즉시 분석을 진행하였다.5 cc (5 ml) of peripheral blood were collected from 98 patients with colorectal cancer and 132 normal patients, respectively, in a Heparin-EDTA tube to prevent blood clotting and transported to the assay room at room temperature for immediate analysis. Proceeded.
각각의 면역세포 마커를 분석하기 위해 다음과 같은 8가지 면역세포 카테고리로 분류하였으며, 8개의 폴리스티렌 튜브(12x75mm Polystyrene tube)를 준비하였다. 각각의 8개 튜브에서는 다음과 같은 항체조합이 사용되었고 각 항체의 볼륨은 아래 표 1 내지 8과 같다. 표 1 내지 표 8은 각각 NK cells(NKC), Th1Th2(TH), Myeloid Derived Stem Cells(MDSCs), Regulatory T cells(Tregs), Cytotoxic T cells(CTLs), Exhausted T cells(ETc), Immune checkpoint(ICP), Gamma-delta T cells(GDT)의 마커를 분석하기 위한 항체로서 모든 항체는 항-인간 마우스 이뮤노글로불린(mouse anti-human IgGs)에 형광 물질(fluorescence dye)이 부착되어 있는 형태이며 본 발명에서 사용된 형광의 종류는 FITC, Alexa Fluor 488, PE, PE-Cy5, PE-Cy7, PerCP, 및 APC의 7종이다. 각 표의 상단 항목에서 Channel은 유세포분석기의 디텍터 채널 종류를, Tandem-dye는 항체에 부착된 형광의 종류를, Marker는 표지 마커의 종류를, Marker location은 각 마커의 위치를 의미하여 각 마커의 위치에 따라 하기 설명하는 바와 같이 실험방법에 차이가 있을 수 있다. In order to analyze each immune cell marker, the following eight immune cell categories were classified, and eight polystyrene tubes (12 × 75 mm polystyrene tubes) were prepared. In each of the eight tubes, the following antibody combinations were used, and the volume of each antibody is shown in Tables 1 to 8 below. Tables 1 to 8 show NK cells (NKC), Th1Th2 (TH), Myeloid Derived Stem Cells (MDSCs), Regulatory T cells (Tregs), Cytotoxic T cells (CTLs), Exhausted T cells (ETc), and Immune checkpoint ( ICP), an antibody for analyzing markers of Gamma-delta T cells (GDT), all of which have a fluorescent dye attached to anti-human mouse anti-human IgGs. The kinds of fluorescence used in the invention are seven kinds of FITC, Alexa Fluor 488, PE, PE-Cy5, PE-Cy7, PerCP, and APC. At the top of each table, Channel is the detector channel type of the flow cytometer, Tandem-dye is the type of fluorescence attached to the antibody, Marker is the type of marker marker, and Marker location is the location of each marker. As described below, there may be a difference in the experimental method.
NK cells(NKC)NK cells (NKC)
ChannelChannel Tandem-dyeTandem-dye MarkerMarker Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 surfacesurface BDBD 555339555339 61256586125658 0.50.5
FL2FL2 PEPE CD56CD56 surfacesurface BDBD 555516555516 60546206054620 2.52.5
FL3FL3 PE-Cy7PE-Cy7 CD314CD314 surfacesurface BDBD 562365562365 61409116140911 2.52.5
FL4FL4 APCAPC CD158bCD158b surfacesurface BioLegendBioLegend 312612312612 B210467B210467 0.50.5
Th1Th2(TH)Th1Th2 (TH)
ChannelChannel Tandem-dyeTandem-dye TargetTarget Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 Alexa Fluor488Alexa Fluor488 CD183CD183 surfacesurface BDBD 558047558047 61558496155849 0.50.5
FL2FL2 PEPE CD194CD194 surfacesurface BDBD 551120551120 51078775107877 0.50.5
FL3FL3 PE-Cy5PE-Cy5 CD4CD4 surfacesurface BDBD 555348555348 50375895037589 0.50.5
FL4FL4 APCAPC CD196CD196 surfacesurface BDBD 560619560619 51358345135834 0.150.15
Myeloid Derived Stem Cells(MDSCs)Myeloid Derived Stem Cells (MDSCs)
ChannelChannel Tandem-dyeTandem-dye TargetTarget Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 surfacesurface BDBD 555339555339 61256586125658 0.50.5
FL1FL1 FITCFITC CD19CD19 surfacesurface BDBD 555412555412 50976635097663 0.50.5
FL1FL1 FITCFITC CD56CD56 surfacesurface BDBD 340410340410 61415546141554 2.52.5
FL2FL2 PEPE CD11bCD11b surfacesurface BDBD 555388555388 43147504314750 0.10.1
FL3FL3 PE-Cy5PE-Cy5 HLA-DRHLA-DR surfacesurface BDBD 555813555813 61327256132725 2.52.5
FL4FL4 APCAPC CD33CD33 surfacesurface BDBD 551378551378 42885424288542 0.10.1
Regulatory T cells(Tregs)Regulatory T cells (Tregs)
ChannelChannel Tandem-dyeTandem-dye TargetTarget Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD4CD4 surfacesurface BDBD 555346555346 50976445097644 0.50.5
FL2FL2 PEPE CD25CD25 surfacesurface BDBD 555432555432 60408856040885 2.52.5
FL3FL3 PE-Cy7PE-Cy7 CD152CD152 intraintra BDBD 555854555854 51428305142830 2.52.5
FL4FL4 APCAPC CD279CD279 surfacesurface BDBD 558694558694 61548006154800 2.5 2.5
Cytotoxic T cells(CTLs)Cytotoxic T cells (CTLs)
ChannelChannel Tandem-dyeTandem-dye TargetTarget Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 surfacesurface BDBD 555339555339 61256586125658 0.50.5
FL2FL2 PEPE CD25CD25 surfacesurface BDBD 555432555432 60408856040885 2.52.5
FL3FL3 PE-Cy7PE-Cy7 CD152CD152 intraintra BDBD 555854555854 51428305142830 2.52.5
FL4FL4 APCAPC CD279CD279 surfacesurface BDBD 558694558694 61548006154800 2.52.5
Exhausted T cells(ETc)Exhausted T cells (ETc)
ChannelChannel Tandem-dyeTandem-dye TargetTarget Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 surfacesurface BDBD 555339555339 61256586125658 0.50.5
FL2FL2 PEPE TIGITTIGIT SurfaceSurface eBioseienceeBioseience 12-9500-4212-9500-42 43100124310012 2.52.5
FL3FL3 PerCPPerCP CD8CD8 SurfaceSurface eBioseienceeBioseience 46-0087-4146-0087-41 E10832-1634E10832-1634 2.52.5
FL4FL4 APCAPC CD279CD279 SurfaceSurface BDBD 558694558694 61548006154800 2.52.5
Immune checkpoint(ICP)Immune checkpoint (ICP)
ChannelChannel Tandem-dyeTandem-dye markermarker Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 SurfaceSurface BDBD 555339555339 61256586125658 0.50.5
FL2FL2 PEPE CD366CD366 IntraIntra BDBD 563422563422 50828115082811 1One
FL3FL3 PerCPPerCP CD272CD272 IntraIntra R&D systemsR & D systems FAB3354CFAB3354C ABCC212071ABCC212071 1One
FL4FL4 APCAPC CD223CD223 intraintra R&D systemsR & D systems FAB23193AFAB23193A ADXM0116041ADXM0116041 2.52.5
Gamma-delta T cells(GDT)Gamma-delta T cells (GDT)
ChannelChannel Tandem-dyeTandem-dye markermarker Marker locationMarker location DistributorDistributor Catalog#Catalog # Lot#Lot # Volume/testVolume / test
FL1FL1 FITCFITC CD3CD3 SurfaceSurface BDBD 555339555339 61256586125658 0.50.5
FL2FL2 PEPE γδTCRγδ TCR surfacesurface BDBD 555717555717 52679445267944 1One
기본적인 염색 방법은 다음과 같은 과정으로 진행 되었다.The basic staining method was carried out as follows.
① 염색하고자 하는 각 항체의 테스트당 볼륨(volume/test)을 마이크로피펫(micro pipette)으로 1.8mL 볼륨의 미세원심분리 튜브(microcentrifuge tube)에 분주한다. 각 항체의 조합 볼륨은 테스트당 10μL가 되도록 준비한다. 또한, 항체 조합은 염색하고자 하는 마커의 부위(marker location)가 모두 세포막(surface)인지 또는 세포막(surface)과 세포질(intra)의 조합인지에 따라 준비가 달라지는데 기본적인 염색은 먼저 세포막(surface) 마커만 염색하기 위한 항체를 조합하여 세포를 염색하고 세포를 고정한 다음(Fixation) 세포질(intra) 마커를 준비하여 염색하는 방식으로 이루어진다.① Dispense the volume per test (volume / test) of each antibody to be stained into a microcentrifuge tube of 1.8 mL volume using a micro pipette. The combined volume of each antibody is prepared to be 10 μL per test. In addition, the preparation of the antibody varies depending on whether the marker location to be stained is all the surface of the membrane or the combination of the surface and the cytoplasm. The basic staining is only the surface marker. The cells are stained by combining antibodies for staining, fixation of cells, and then prepared by staining intracellular markers.
예를 들어 마커의 부위가 세포막(surface)의 조합으로만 구성된 NK cell(NKC)을 10 tests(10명)로 분석하고자 할 경우에는, FITC mouse anti-human CD3 IgGs의 5μL(0.5μL x 10 tests), PE mouse anti-human CD56 IgGs의 25μL(2.5μL x 10 tests), PE-Cy7 mouse anti-human CD314 IgGs의 25μL(2.5μL x 10 tests), APC mouse anti-human CD158b IgG의 5μL(0.5 μL x 10 tests)을 각각 미세원심분리 튜브에 넣어 60μL를 준비한다. 그런 다음 40μL의 PBS(Phosphate-buffered saline)를 튜브에 넣어 최종적으로 100μL의 항체조합 볼륨을 만든다.For example, if you want to analyze NK cells (NKC) consisting of a combination of surface membranes for 10 tests (10 people), 5 μL (0.5 μL x 10 tests) of FITC mouse anti-human CD3 IgGs. ), 25 μL (2.5 μL × 10 tests) of PE mouse anti-human CD56 IgGs, 25 μL (2.5 μL × 10 tests) of PE-Cy7 mouse anti-human CD314 IgGs, 5 μL (0.5 μL of APC mouse anti-human CD158b IgG) x 10 tests) were put into each microcentrifuge tube to prepare 60 μL. Then, 40 μL of PBS (Phosphate-buffered saline) was added to the tube to make a final volume of 100 μL of antibody combination.
다른 예로 마커의 부위가 세포막(surface)과 세포질(intra) 조합으로 구성된 Tregs을 10 tests(10명)로 분석하고자 할 경우에는, 항체 조합 튜브를 2개 준비한다.As another example, if you want to analyze Tregs consisting of a combination of the surface and the cytoplasm of the marker with 10 tests (10 persons), prepare two antibody combination tubes.
먼저, 첫 번째 튜브에 세포막(surface) 염색 항체인 FITC mouse anti-human CD4 IgGs의 5μL(0.5μL x 10 tests), PE mouse anti-human CD25 IgGs의 25μL(2.5μL x 10 tests), APC mouse anti-human CD279 IgG의 5μL(0.5μL x 10 tests)을 각각 미세원심분리튜브에 넣어 35μL를 준비한다. 그런 다음 65μL의 PBS(Phosphate-buffered saline)를 튜브에 넣어 최종적으로 100μL의 항체조합 볼륨을 만든다.First, in the first tube, 5 μL (0.5 μL x 10 tests) of FITC mouse anti-human CD4 IgGs, surface staining antibody, 25 μL (2.5 μL x 10 tests) of PE mouse anti-human CD25 IgGs, APC mouse anti Prepare 5 μL (0.5 μL × 10 tests) of human CD279 IgG into microcentrifuge tubes and prepare 35 μL. Then, 65 μL of PBS (Phosphate-buffered saline) was added to the tube to make a final volume of 100 μL antibody combination.
그런 다음 두번째 튜브에 세포질(intra) 염색 항체인 PE-Cy5 mouse anti-human CD152 IgGs의 25μL(2.5μL x 10 tests)을 준비하고 75μL의 PBS(Phosphate-buffered saline)를 튜브에 넣어 최종적으로 100μL의 항체조합 볼륨을 만든다.Then, prepare 25 μL (2.5 μL × 10 tests) of PE-Cy5 mouse anti-human CD152 IgGs, intra-staining antibody, in a second tube and put 75 μL of Phosphate-buffered saline (PBS) into the tube. Make an antibody combination volume.
이와 같은 방법으로 마커의 부위가 세포막의 조합으로 구성된 NK cells(NKC), Th1Th2(TH), Myeloid Derived Stem Cells(MDSCs), Exhausted T cells(ETc), Gamma-delta T cells(GDT)의 염색 항체를 준비하고, 마커의 부위가 세포막과 세포질의 조합으로 구성된 Regulatory T cells(Tregs), Cytotoxic T cells(CTLs), Immune checkpoint(ICP)의 염색 항체를 세포막과 세포질 염색용으로 각각 준비한다. 각 항체의 구성 부피비는 표 1 내지 표 8의 volume/test비를 통해 적시한 바와 같으므로 위 예시와 같은 방법으로 항체조합 볼륨을 준비할 수 있다.In this way, the staining antibody of NK cells (NKC), Th1Th2 (TH), Myeloid Derived Stem Cells (MDSCs), Exhausted T cells (ETc), Gamma-delta T cells (GDT) consisting of a combination of cell membranes Prepare staining antibodies of Regulatory T cells (Tregs), Cytotoxic T cells (CTLs), and Immune checkpoint (ICP), each of which consists of a combination of cell membrane and cytoplasm, for cell membrane and cytoplasmic staining. Constituent volume ratio of each antibody is as indicated through the volume / test ratio of Table 1 to Table 8, the antibody combination volume can be prepared by the same method as the above example.
② 염색을 위한 모든 항체조합 튜브가 준비되면 각각의 8개 폴리스티렌 튜브에 50μL의 전혈(whole blood)을 분주한다.② Once all the antibody combination tubes for staining are prepared, dispense 50 μL of whole blood into each of eight polystyrene tubes.
③ 미리 준비된 항체 조합이 담겨 있는 튜브(세포막(surface)용 항체조합)에서 혈액에 들어 있는 테스트 튜브로 항체 조합을 10μL씩 분주하고 마이크로피펫으로 잘 섞어준다. 그런 다음 빛을 차단한 상태의 실온에서 20분간 염색한다.③ From the tube containing the prepared antibody combination (antibody combination for cell membrane), dispense 10 μL of the antibody combination into the test tube in the blood and mix well with a micropipette. Then, dye for 20 minutes at room temperature with light blocking.
④ 세포 염색이 끝나면 혈액의 적혈구(RBC)를 제거하기 위해 450μL의 lysing solution(BD FACS Lysing solution, DB Biosciences)을 각각의 8개 폴리스티렌 튜브에 분주하고 vortex로 잘 섞어서 20분간 빛을 차단한 실온에서 반응시킨다.④ After cell staining, dispense 450 μL of lysing solution (BD FACS Lysing solution, DB Biosciences) into each of 8 polystyrene tubes and mix well with vortex to remove red blood cells (RBC). React.
⑤ 2mL의 PBS를 각각 튜브에 분주하고 원심분리기에 넣어 5분간 250 중력가속도(G force)로 돌린다. 그런 다음 상층액을 버리고 한 번 더 2mL의 PBS로 동일하게 원심분리기로 세포를 세척한다.⑤ Dispense 2 mL of PBS into each tube and place in a centrifuge for 250 minutes for 5 minutes. Turn to G force. Then discard the supernatant and wash the cells in the same centrifuge once more with 2 mL of PBS.
⑥ 세포막(surface)만의 조합 항체로 염색이 되었으면 200μL의 PBS를 튜브에 넣고 잘 섞어준 다음 유세포분석기를 이용해 분석을 진행한다.⑥ If stained with a combination antibody of the cell membrane (surface) only 200μL PBS into the tube and mix well and proceed with the flow cytometer.
⑦ 세포막(surface) 및 세포질(intra) 염색 조합의 항체인 경우에는 상기 ⑤ 과정이 끝난 이후 0.05% saponine 함유 Distilled water 40μL을 미리 준비된 세포질(intra) 염색용 항체 10μL와 동시에 튜브에 넣어주고 잘 섞어준 다음 실온에서 빛을 차단한 상태에서 20분간 2차 염색을 진행한다. 그런 다음 ⑤ 과정을 거쳐 200μL의 PBS를 튜브에 넣고 유세포분석기로 분석을 진행한다.⑦ In the case of the antibody of the combination of the surface membrane and the cytoplasm (intra) staining, ⑤ 40 μL of the distilled water containing 0.05% saponine was added to the tube at the same time with 10 μL of the antibody for intracellular staining and mixed well. Then, secondary staining is performed for 20 minutes while blocking light at room temperature. Then, ⑤ process 200μL PBS into the tube and proceed with the flow cytometer.
유세포분석을 통해 얻게 되는 결과 값은 모두 분포도(%)로 얻어지게 되는데 각 분포도에 따른 세포 수(cells/μL)는 자동혈구 분석기를 이용해 얻은 백혈구 세포의 차등(differential)을 이용하여 분포도에 곱하는 방식으로 계산될 수 있다.The results obtained through flow cytometry are all obtained in the distribution (%), and the number of cells (cells / μL) according to each distribution is multiplied by the distribution using the differential of the white blood cells obtained using the automatic blood cell analyzer. It can be calculated as
예를 들어, CD3-CD56+ NK cells = 15% 일 경우, 그 세포 수는 림프구 세포 3000 cells/μL을 이용하여 3000 x 0.15 = 450cells/μL로 계산된다.For example, if CD3-CD56 + NK cells = 15%, the cell count is calculated as 3000 x 0.15 = 450 cells / μL using lymphocyte cells 3000 cells / μL.
위와 같은 실험 과정을 통해 유세포분석기를 이용한 면역세포의 각 마커 분석 결과를 도 1 내지 8에 나타내었으며, 대장 직장암 환자와 정상인을 분석한 통계 처리 결과 값을 표 9 내지 18에 표시하였다. 참고로 도 1 내지 도 8, 도 10은 반시계방향으로 90도 회전되어 있으므로 이하에서는 위 도면들은 시계 방향으로 90도 회전시킨 것을 기준으로 설명함을 밝혀둔다.The results of analyzing the markers of immune cells using the flow cytometer through the above experimental procedure are shown in FIGS. 1 to 8, and the statistical results of analyzing the colorectal cancer patients and normal persons are shown in Tables 9 to 18. For reference, FIGS. 1 to 8 and 10 are rotated 90 degrees in the counterclockwise direction, it will be described below that the above drawings are based on the rotated 90 degrees in the clockwise direction.
도 1은 본 발명의 바람직한 일 실시예에 따른 NKC분석을 위해 ① CD3-CD56+, ② CD3+CD56+, ③ CD314+CD158b- in CD3-CD56+ cells (NK cells), ④ CD314-CD158b+ in NK cells, ⑤ CD314-CD158b+ in NK cells, ⑥ CD158b+ in CD3+CD56- (T cells)와 같이 6가지 세포 표현형을 제공한다.Figure 1 is for the NKC analysis according to a preferred embodiment of the present invention ① CD3-CD56 +, ② CD3 + CD56 +, ③ CD314 + CD158b- in CD3-CD56 + cells (NK cells), ④ CD314-CD158b + in NK cells, ⑤ It provides six cell phenotypes: CD314-CD158b + in NK cells, ⑥ CD158b + in CD3 + CD56- (T cells).
보다 상세히, 도 1의 왼쪽 상단 그래프의 경우 유세포분석기로 혈액을 분석하면 X축을 FSC-H(세포의 상대적 크기)로 Y축을 SSC-H(세포의 주름진 정도)로 세포들을 분류할 수 있는데, 말초혈액 면역세포를 세포 크기 및 주름진 정도에 따라 림프구세포(lymphocytes), 단핵구세포(monocytes), 및 과립구(granulocytes)로 분류할 수 있다. 이중 그래프 중심부근의 림포사이트(Lymphocytes)를 중심으로 분석을 진행하였으며, 이 부분을 각 마커에 부착되는 항체를 이용해 염색을 진행한 결과이다. 오른쪽 상단 그래프의 경우 X축은 CD3의 염색 유무를 Y축은 CD56의 염색 유무를 나타내는데 그래프 내부의 십자 모양의 실선을 중심으로 왼쪽은 CD3- 오른쪽은 CD3+, 아래쪽은 CD56- 위쪽은 CD56+로 볼 수 있다. 이 경우 CD3-CD56+ 부분을 Q1, CD3+CD56+ 부분을 Q2, CD3+CD56- 부분을 Q3, CD3-CD56- 부분을 Q4로 지정하였다. 왼쪽 하단의 그래프의 경우 Q1 지역의 세포들을 다시 항체를 이용해 CD314, CD158 마커의 염색 유무에 따라 분류한 것으로서 그래프의 표현방법은 앞서 설명한 바와 같다. 오른쪽 하단 그래프의 경우 오른쪽 상단 그래프의 Q3 지역의 세포들을 다시 항체를 이용해 CD314, CD158 마커의 염색 유무에 따라 분류한 것으로서 그래프의 표현방법은 앞서 설명한 바와 같다.More specifically, in the upper left graph of FIG. 1, when analyzing blood with a flow cytometer, cells can be classified into X-axis as FSC-H (relative size of cells) and Y-axis as SSC-H (cell wrinkles). Blood immune cells can be classified into lymphocytes, monocytes, and granulocytes according to cell size and extent of wrinkles. The analysis was performed mainly on the lymphocytes (Lymphocytes) in the center of the graph, and this part was stained using an antibody attached to each marker. In the upper right graph, the X-axis shows the presence of CD3 staining and the Y-axis shows the presence of CD56 staining. The cross-shaped solid line inside the graph shows CD3- + on the left and CD56 + on the bottom. In this case, the CD3-CD56 + part was designated as Q1, the CD3 + CD56 + part as Q2, the CD3 + CD56- part as Q3, and the CD3-CD56- part as Q4. In the lower left graph, cells of the Q1 region were again classified according to the presence or absence of the CD314 and CD158 markers using antibodies, and the graph expression method was as described above. In the lower right graph, the cells of the Q3 region of the upper right graph were again classified according to the presence or absence of the CD314 and CD158 markers using antibodies, and the expression method of the graph was as described above.
도 2는 본 발명의 바람직한 일 실시예에 따른 Th1/Th2 분석을 위해 ① Th1, ② Th2, ③ Th17, ④Th1/Th2와 같이 4가지 세포 표현형을 제공한다.Figure 2 provides four cell phenotypes, such as ① Th1, ② Th2, ③ Th17, ④ Th1 / Th2 for Th1 / Th2 analysis according to a preferred embodiment of the present invention.
보다 상세히, 도 2 역시 도 1의 림포사이트 부분의 세포를 이용해 분석한 결과로서 항체를 순차적으로 또는 동시에 넣어 각 마커 CD4, CD183, CD194, CD196의 염색 유무를 분류하여 분석한 결과를 도시하였으며, 그래프의 X축과 Y축에 넣은 항체와의 반응 유무를 수치로 표현하였으며, 그래프 내에 실선을 통해 각 구역을 세분화하였다. 상세한 방법은 도 1을 통하여 설명한 바와 같다. 한편, Th1, Th2, Th17의 분포도는 아래와 같은 수학식 1에 의해 구해진다.More specifically, Figure 2 also shows the results of the analysis by using the cells of the lymphocyte site of Figure 1 by sorting the presence or absence of the staining of each marker CD4, CD183, CD194, CD196 sequentially or simultaneously, graph The reaction between the X-axis and the Y-axis antibody was expressed as a numerical value, and each region was subdivided by a solid line in the graph. The detailed method is as described with reference to FIG. 1. On the other hand, the distribution of Th1, Th2, Th17 is obtained by the following equation (1).
Figure PCTKR2018000505-appb-M000001
Figure PCTKR2018000505-appb-M000001
Figure PCTKR2018000505-appb-I000001
Figure PCTKR2018000505-appb-I000001
Figure PCTKR2018000505-appb-I000002
Figure PCTKR2018000505-appb-I000002
Figure PCTKR2018000505-appb-I000003
Figure PCTKR2018000505-appb-I000003
도 3은 본 발명의 바람직한 일 실시예에 따른 Myeloid Derived Stem Cells(MDSCs) 분석을 위한 세포 표현형을 제공한다.Figure 3 provides a cell phenotype for analysis of Myeloid Derived Stem Cells (MDSCs) according to a preferred embodiment of the present invention.
보다 상세히, 그래프의 표현 방법은 도 1을 통하여 설명한 바와 같고, 도면에서와 같이 HLA-DR 및 Lineage 계열(CD3CD19CD56) 모두 음성(negative)인 세포 집단(Q4) 안에서 CD33+과 CD11b+를 발현하는 세포를 표현형으로 하며 MDSCs는 다음 수학식 2와 같이 구해질 수 있다.In more detail, the method of expressing the graph is as described with reference to FIG. MDSCs can be obtained as shown in Equation 2 below.
Figure PCTKR2018000505-appb-M000002
Figure PCTKR2018000505-appb-M000002
도 4는 본 발명의 바람직한 일 실시예에 따른 Regulatory T cells(Tregs) 분석을 위해 ① CD4+CD279+, ② CD4+CD25+, ③ CD4+CD152+와 같이 3가지 세포 표현형을 제공한다. 도 4 내지 도 8을 통하여 나타낸 그래프의 표현은 도 1을 통하여 설명한 바와 같으므로 자세한 설명은 생략한다.Figure 4 provides three cell phenotypes, such as ① CD4 + CD279 +, ② CD4 + CD25 +, ③ CD4 + CD152 + for the analysis of Regulatory T cells (Tregs) according to an embodiment of the present invention. Since the representation of the graph shown through FIGS. 4 to 8 is the same as that described with reference to FIG. 1, a detailed description thereof will be omitted.
도 5는 본 발명의 바람직한 일 실시예에 따른 Cytotoxic T cells(CTLs) 분석을 위해 ① CD152+ in CTLs, ② CD279+ in CTLs와 같이 2가지 세포 표현형을 제공한다.Figure 5 provides two cell phenotypes, such as ① CD152 + in CTLs, ② CD279 + in CTLs for the analysis of Cytotoxic T cells (CTLs) according to a preferred embodiment of the present invention.
도 6은 본 발명의 바람직한 일 실시예에 따른 Exhausted T cells(ETc) 분석을 위해 CD279+TIGIT+ in CTLs 세포 표현형을 제공한다.Figure 6 provides a CD279 + TIGIT + in CTLs cell phenotype for Exhausted T cells (ETc) analysis according to a preferred embodiment of the present invention.
도 7은 본 발명의 바람직한 일 실시예에 따른 Immune checkpoint(ICP) 분석을 위해 ① CD3+CD366+, ② CD3-CD366+, ③ CD366+ in lymphocytes, ④ CD3+CD272+, ⑤ CD3-CD272+, ⑥ CD272+ in lymphocytes, ⑦ CD3+CD223+, ⑧ CD3-CD223+, ⑨ CD223+ in lymphocytes와 같이 9가지 세포 표현형을 제공한다.FIG. 7 shows ① CD3 + CD366 +, ② CD3-CD366 +, ③ CD366 + in lymphocytes, ④ CD3 + CD272 +, ⑤ CD3-CD272 +, ⑥ CD272 + in lymphocytes, for Immune checkpoint (ICP) analysis according to a preferred embodiment of the present invention. ⑦ CD3 + CD223 +, ⑧ CD3-CD223 +, ⑨ CD223 + In lymphocytes, it provides nine cell phenotypes.
도 8은 본 발명의 바람직한 일 실시예에 따른 Gamma-delta T cells(GDT) 분석을 위해 CD3-γδTCR+ 세포 표현형을 제공한다.8 provides a CD3-γδ TCR + cell phenotype for analysis of Gamma-delta T cells (GDT) according to one preferred embodiment of the present invention.
한편, 표 9는 대장 직장암 환자 및 정상인의 말초혈액 NKC의 평균 분포도 및 세포 수를 나타낸 표이다. 표 10은 대장 직장암 환자 및 정상인의 말초혈액 TH의 평균 분포도 및 세포 수를 나타낸 표이다. 표 11은 대장 직장암 환자 및 정상인의 말초혈액 MDSCs의 평균 분포도 및 세포 수를 나타낸 표이다. 표 12는 대장 직장암 환자 및 정상인의 말초혈액 Tregs의 평균 분포도 및 세포 수를 나타낸 표이다. 표 13은 대장 직장암 환자 및 정상인의 말초혈액 CTLs의 평균 분포도 및 세포 수를 나타낸 표이다. 표 14는 대장 직장암 환자 및 정상인의 말초혈액 ETc의 평균 분포도 및 세포 수를 나타낸 표이다. 표 15는 대장 직장암 환자 및 정상인의 말초혈액 ICP의 평균 분포도 및 세포 수를 나타낸 표이다. 표 16은 대장 직장암 환자 및 정상인의 말초혈액 GDT의 평균 분포도 및 세포 수를 나타낸 표이다. 표 17은 대장 직장암 환자 및 정상인의 말초혈액 WBCS의 평균 분포도 및 세포 수를 나타낸 표이다. 표 18은 대장 직장암 환자 및 정상인의 말초혈액 면역세포의 비(Ratio)를 나타낸 표이다.On the other hand, Table 9 is a table showing the average distribution and cell number of peripheral blood NKC of colorectal cancer patients and normal people. Table 10 is a table showing the average distribution and cell number of peripheral blood TH of colorectal cancer patients and normal people. Table 11 is a table showing the average distribution and cell number of peripheral blood MDSCs of colorectal cancer patients and normal people. Table 12 is a table showing the average distribution and cell number of peripheral blood Tregs of colorectal cancer patients and normal people. Table 13 is a table showing the average distribution and cell number of peripheral blood CTLs of colorectal cancer patients and normal people. Table 14 is a table showing the average distribution and cell number of peripheral blood ETc of colorectal cancer patients and normal people. Table 15 is a table showing the average distribution and cell number of peripheral blood ICP of colorectal cancer patients and normal people. Table 16 is a table showing the average distribution and cell number of peripheral blood GDT of colorectal cancer patients and normal people. Table 17 is a table showing the average distribution and cell number of peripheral blood WBCS of colorectal cancer patients and normal people. Table 18 is a table showing the ratio of peripheral blood immune cells of colorectal cancer patients and normal people.
상기 각 표의 상단 항목에서 N은 실험군의 숫자, Mean은 평균값, S.D.는 표준편차, S.E.는 표준에러, 95% Mean은 오차율을 줄이기 위해 집단의 양 말단의 결과치 2.5%씩을 버리고 95%만을 이용해 계산한 평균값, Median은 중앙값을 의미한다.In the upper column of each table, N is the number of experimental groups, Mean is the mean value, SD is the standard deviation, SE is the standard error, and 95% Mean is calculated using only 95% by discarding 2.5% of the results at both ends of the group to reduce the error rate The mean value, Median, means the median value.
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
NKCNKC CD3-CD56+(NK) %CD3-CD56 + (NK)% ControlControl 132132 16.5016.50 8.088.08 0.700.70 16.0016.00 14.8214.82 0.1830.183
PatientsPatients 9898 17.7917.79 10.0510.05 1.281.28 17.2017.20 16.2116.21
NKCNKC CD3+CD56+ %CD3 + CD56 +% ControlControl 132132 5.005.00 4.174.17 0.360.36 4.454.45 3.773.77 0.0650.065
PatientsPatients 9898 3.673.67 2.502.50 0.320.32 3.493.49 3.003.00
NKCNKC CD3-CD56+ cells/μLCD3-CD56 + cells / μL ControlControl 132132 342342 198198 1717 325325 313313 0.2840.284
PatientsPatients 9898 345345 206206 2626 330330 304304
NKCNKC CD3+CD56+(NKT) cells/μLCD3 + CD56 + (NKT) cells / μL ControlControl 132132 108108 109109 1010 9393 7676 0.1290.129
PatientsPatients 9898 7676 6464 88 7070 5656
NKCNKC CD314+CD314 + CD158bCD158b - - %% in NK cells in NK cells ControlControl 132132 56.1956.19 16.4516.45 1.481.48 56.6056.60 57.1457.14 0.0300.030
PatientsPatients 9898 47.0447.04 18.0218.02 2.292.29 47.1247.12 49.4149.41
NKCNKC CD314+CD158b- cells/μL in NK cellsCD314 + CD158b- cells / μL in NK cells ControlControl 132132 181181 151151 1313 178178 155155 0.0840.084
PatientsPatients 9898 162162 114114 1414 152152 133133
NKCNKC CD314-CD314- CD158bCD158b + + %% in NK cells in NK cells ControlControl 132132 1.821.82 2.512.51 0.230.23 1.471.47 1.111.11 0.0000.000
PatientsPatients 9898 6.466.46 5.675.67 0.720.72 6.006.00 5.085.08
NKCNKC CD314-CD314- CD158bCD158b + cells/+ cells / μLμL in  in NKNK cells cells ControlControl 132132 66 99 1One 55 33 0.0000.000
PatientsPatients 9898 2020 1919 22 1919 1313
NKCNKC CD314+ CD314 + %% in CD3+CD56-(T cells) in CD3 + CD56- (T cells) ControlControl 132132 41.9841.98 9.539.53 0.860.86 41.9341.93 41.3141.31 0.0070.007
PatientsPatients 9898 33.1333.13 10.4010.40 1.321.32 32.7332.73 33.1133.11
NKCNKC CD314+ cells/μL in T cellsCD314 + cells / μL in T cells ControlControl 132132 541541 292292 2525 561561 524524 0.5430.543
PatientsPatients 9898 449449 222222 2828 436436 428428
NKCNKC CD158b+ % in T cellsCD158b +% in T cells ControlControl 132132 5.845.84 10.2810.28 0.930.93 4.324.32 3.513.51 0.5780.578
PatientsPatients 9898 5.795.79 5.195.19 0.660.66 5.065.06 4.124.12
NKCNKC CD158b+ cells/μL in T cellsCD158b + cells / μL in T cells ControlControl 132132 7676 134134 1212 6060 4848 0.4770.477
PatientsPatients 9898 7979 8383 1111 6868 5353
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
THTH CD4+ CD4 + %% controlcontrol 132132 38.0238.02 7.907.90 0.690.69 38.1138.11 38.0038.00 0.000 0.000
Patients Patients 9898 43.0843.08 10.0110.01 1.271.27 43.1243.12 42.3242.32
THTH CD4+ cells/CD4 + cells / μLμL controlcontrol 132132 780780 249249 2222 774774 771771 0.0020.002
Patients Patients 9898 905905 413413 5252 885885 865865
THTH Th1Th1 %% controlcontrol 132132 14.2114.21 5.175.17 0.450.45 14.0514.05 13.5113.51 0.0090.009
Patients Patients 9898 13.9313.93 5.225.22 0.660.66 13.6813.68 13.5213.52
THTH Th1 cells/μLTh1 cells / μL controlcontrol 132132 109109 5050 44 108108 101101 0.7570.757
Patients Patients 9898 123123 7272 99 116116 109109
THTH Th2Th2 %% controlcontrol 132132 13.3613.36 3.573.57 0.310.31 13.1813.18 12.8312.83 0.0010.001
Patients Patients 9898 16.4516.45 4.604.60 0.580.58 16.4216.42 15.7415.74
THTH Th2Th2 cells/ cells / μLμL controlcontrol 132132 102102 3737 33 100100 9797 0.0000.000
Patients Patients 9898 143143 6666 88 141141 144144
THTH Th17 %Th17% controlcontrol 132132 9.509.50 3.153.15 0.270.27 9.439.43 9.169.16 0.6330.633
Patients Patients 9898 9.549.54 3.903.90 0.490.49 9.329.32 8.588.58
THTH Th17Th17 cells/ cells / μLμL controlcontrol 132132 7272 2828 22 7171 7070 0.0030.003
Patients Patients 9898 8585 5757 77 7979 7878
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
MDSCsMDSCs MDSCs %MDSCs% controlcontrol 132132 35.7035.70 13.4013.40 1.171.17 35.5135.51 34.9634.96 0.2740.274
Patients Patients 9898 44.1344.13 16.1916.19 2.062.06 44.7544.75 47.2147.21
MDSCsMDSCs MDSCsMDSCs cells/ cells / μLμL controlcontrol 132132 22122212 12271227 107107 21112111 19381938 0.0050.005
Patients Patients 9898 33333333 18151815 231231 32313231 31323132
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
TregsTregs CD4+CD279+(PD-1) CD4 + CD279 + (PD-1) %% controlcontrol 132132 7.077.07 2.422.42 0.210.21 6.926.92 7.007.00 0.0000.000
Patients Patients 9898 12.5912.59 4.844.84 0.610.61 12.3012.30 12.0712.07
TregsTregs CD4+CD279+ cells/CD4 + CD279 + cells / μLμL controlcontrol 132132 146146 6262 55 142142 132132 0.0000.000
Patients Patients 9898 256256 131131 1717 248248 224224
TregsTregs CD4+CD25+ CD4 + CD25 + %% controlcontrol 132132 15.5415.54 4.364.36 0.380.38 15.3815.38 15.8515.85 0.0000.000
Patients Patients 9898 21.1721.17 5.925.92 0.750.75 21.3121.31 21.3121.31
TregsTregs CD4+CD25+ cells/CD4 + CD25 + cells / μLμL controlcontrol 132132 317317 119119 1010 310310 295295 0.0030.003
Patients Patients 9898 445445 230230 2929 427427 402402
TregsTregs CD4+CD152+(CD4 + CD152 + ( CTLACTLA -4) -4) %% controlcontrol 132132 5.075.07 1.721.72 0.150.15 4.934.93 4.764.76 0.0000.000
Patients Patients 9898 8.518.51 4.754.75 0.600.60 8.018.01 7.327.32
TregsTregs CD4+CD152+ cells/CD4 + CD152 + cells / μLμL controlcontrol 132132 103103 4040 33 100100 9999 0.0000.000
Patients Patients 9898 169169 9292 1212 163163 145145
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
CTLsCTLs CD3+ %CD3 +% controlcontrol 132132 65.3765.37 8.888.88 0.770.77 65.7165.71 65.8265.82 0.1160.116
Patients Patients 9898 65.3765.37 10.4510.45 1.331.33 65.4565.45 67.0567.05
CTLsCTLs CD3+ cells/μLCD3 + cells / μL controlcontrol 132132 13531353 426426 3737 13391339 13091309 0.1490.149
Patients Patients 9898 13711371 553553 7070 13551355 13791379
CTLsCTLs CD3+CD8+ %CD3 + CD8 +% controlcontrol 132132 27.3727.37 7.967.96 0.690.69 26.9226.92 26.2826.28 0.0140.014
Patients Patients 9898 22.3022.30 7.097.09 0.900.90 22.1022.10 21.4121.41
CTLsCTLs CD3+CD8 cells/μLCD3 + CD8 cells / μL controlcontrol 132132 574574 268268 2323 550550 514514 0.2820.282
Patients Patients 9898 466466 228228 2929 451451 426426
CTLsCTLs CD279+ % in CTLsCD279 +% in CTLs controlcontrol 132132 21.5521.55 12.6312.63 1.101.10 20.1320.13 19.3119.31 0.0000.000
Patients Patients 9898 33.8233.82 10.7910.79 1.371.37 33.5433.54 32.2532.25
CTLsCTLs CD279+ cells/μL in CTLsCD279 + cells / μL in CTLs controlcontrol 132132 122122 8888 88 111111 9090 0.0690.069
Patients Patients 9898 147147 6868 99 141141 140140
CTLsCTLs CD152+ % in CTLsCD152 +% in CTLs controlcontrol 132132 19.1319.13 12.1712.17 1.061.06 17.2917.29 16.7916.79 0.0000.000
Patients Patients 9898 24.3024.30 9.929.92 1.261.26 23.6223.62 22.1622.16
CTLsCTLs CD152+ cells/μL in CTLsCD152 + cells / μL in CTLs controlcontrol 132132 104104 6767 66 9595 8989 0.0100.010
Patients Patients 9898 108108 5959 88 103103 105105
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
ETcETc CD279+TIGIT+ % in CTLsCD279 + TIGIT +% in CTLs controlcontrol 132132 15.0915.09 8.998.99 0.820.82 14.3214.32 12.5412.54 0.0000.000
Patients Patients 9898 26.5026.50 9.689.68 1.711.71 26.9926.99 26.0226.02
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
ICPICP CD3-CD366+ (TIM3) %CD3-CD366 + (TIM3)% ControlControl 132132 14.8114.81 7.267.26 0.630.63 14.4414.44 13.7413.74 0.6090.609
PatientsPatients 9898 17.0017.00 8.848.84 1.141.14 16.1816.18 15.9415.94
ICPICP CD3-CD366+ cells/μLCD3-CD366 + cells / μL ControlControl 132132 307307 180180 1616 293293 277277 0.3580.358
PatientsPatients 9898 315315 183183 2323 308308 301301
ICPICP CD3+CD366+ %CD3 + CD366 +% ControlControl 132132 5.785.78 2.672.67 0.230.23 5.625.62 5.375.37 0.2950.295
PatientsPatients 9898 6.206.20 3.143.14 0.410.41 5.985.98 5.435.43
ICPICP CD3+CD366+ cells/μLCD3 + CD366 + cells / μL ControlControl 132132 119119 6565 66 114114 100100 0.4360.436
PatientsPatients 9898 123123 8484 1111 120120 108108
ICPICP CD366+ % in LymphocytesCD366 +% in Lymphocytes ControlControl 132132 20.6120.61 7.027.02 0.610.61 20.2920.29 19.6419.64 0.8920.892
PatientsPatients 9898 23.2023.20 8.478.47 1.091.09 22.4622.46 22.8522.85
ICPICP CD366+ cells/μL in LymphocytesCD366 + cells / μL in Lymphocytes ControlControl 132132 427427 195195 1717 413413 384384 0.5740.574
PatientsPatients 9898 438438 203203 2626 436436 422422
ICPICP CD3-CD272+ (BTLA) %CD3-CD272 + (BTLA)% ControlControl 132132 4.944.94 2.402.40 0.210.21 4.704.70 4.534.53 0.8890.889
PatientsPatients 9898 5.335.33 2.912.91 0.380.38 4.984.98 4.514.51
ICPICP CD3-CD272+cells/μLCD3-CD272 + cells / μL ControlControl 132132 9999 5454 55 9494 9090 0.4270.427
PatientsPatients 9898 9696 4848 66 9494 9090
ICPICP CD3+CD272+ %CD3 + CD272 +% ControlControl 132132 5.815.81 2.582.58 0.220.22 5.645.64 5.285.28 0.0190.019
PatientsPatients 9898 7.047.04 3.373.37 0.430.43 6.716.71 6.046.04
ICPICP CD3+CD272+cells/μLCD3 + CD272 + cells / μL ControlControl 132132 120120 6969 66 114114 111111 0.0990.099
PatientsPatients 9898 137137 7979 1010 135135 122122
ICPICP CD272+ % in LymphocytesCD272 +% in Lymphocytes ControlControl 132132 10.7310.73 3.823.82 0.330.33 10.5210.52 10.4210.42 0.1340.134
PatientsPatients 9898 12.3712.37 5.155.15 0.660.66 11.9411.94 10.6310.63
ICPICP CD272+ cells/μL in LymphocytesCD272 + cells / μL in Lymphocytes ControlControl 132132 219219 106106 99 210210 207207 0.4600.460
PatientsPatients 9898 233233 111111 1414 235235 232232
ICPICP CD3-CD223+ (LAG3) %CD3-CD223 + (LAG3)% ControlControl 132132 4.674.67 3.673.67 0.320.32 4.174.17 3.943.94 0.3440.344
PatientsPatients 9898 6.426.42 4.504.50 0.590.59 5.955.95 5.155.15
ICPICP CD3-CD223+ cells/μLCD3-CD223 + cells / μL ControlControl 132132 9393 6464 66 8686 7373 0.3740.374
PatientsPatients 9898 117117 8989 1111 114114 108108
ICPICP CD3+CD223+ (LAG3) %CD3 + CD223 + (LAG3)% ControlControl 132132 4.294.29 2.462.46 0.210.21 4.074.07 3.933.93 0.0000.000
PatientsPatients 9898 6.916.91 4.324.32 0.560.56 6.546.54 6.016.01
ICPICP CD3+CD223+ cells/μLCD3 + CD223 + cells / μL ControlControl 132132 9090 6565 66 8383 7373 0.0010.001
PatientsPatients 9898 135135 101101 1313 133133 129129
ICPICP CD223+ % in LymphocytesCD223 +% in Lymphocytes ControlControl 132132 9.009.00 4.704.70 0.410.41 8.638.63 8.008.00 0.0030.003
PatientsPatients 9898 13.3413.34 7.427.42 0.970.97 12.7512.75 11.6011.60
ICPICP CD223+ cells/μL in LymphocytesCD223 + cells / μL in Lymphocytes ControlControl 132132 183183 105105 99 175175 161161 0.0130.013
PatientsPatients 9898 252252 166166 2121 252252 232232
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
GDTGDT TCR γδ %TCR γδ% controlcontrol 132132 6.866.86 5.745.74 0.500.50 6.136.13 5.105.10 0.8250.825
Patients Patients 9898 4.584.58 3.983.98 0.510.51 4.104.10 3.033.03
GDTGDT TCR γδ cells/μLTCR γδ cells / μL controlcontrol 132132 142142 128128 1111 125125 108108 0.5930.593
Patients Patients 9898 9595 9494 1212 8383 7070
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
WBCsWBCs WBC cells/μLWBC cells / μL controlcontrol 132132 59735973 15651565 136136 58875887 57505750 0.0000.000
Patients Patients 9898 73697369 22212221 282282 72067206 71007100
WBCsWBCs Lymphocytes %Lymphocytes% controlcontrol 132132 35.4335.43 8.518.51 0.740.74 35.4035.40 35.9035.90 0.0050.005
Patients Patients 9898 29.1129.11 9.679.67 1.231.23 28.9928.99 30.3530.35
WBCsWBCs Neutrophils %Neutrophils% controlcontrol 132132 54.4154.41 9.919.91 0.860.86 54.5254.52 53.9553.95 0.0100.010
Patients Patients 9898 61.2461.24 10.7810.78 1.371.37 61.0461.04 59.6559.65
WBCsWBCs Neutrophils cells/μLNeutrophils cells / μL controlcontrol 132132 33113311 12751275 111111 32173217 30993099 0.0000.000
Patients Patients 9898 46234623 20812081 264264 44014401 41454145
WBCsWBCs Neutrophils/LymphocytesNeutrophils / Lymphocytes controlcontrol 132132 1.721.72 0.880.88 0.080.08 1.631.63 1.521.52 0.0070.007
Patients Patients 9898 2.582.58 1.661.66 0.210.21 2.382.38 1.931.93
WBCsWBCs Lymphocytes cells/μLLymphocytes cells / μL controlcontrol 132132 20662066 574574 5050 20502050 20092009 0.4850.485
Patients Patients 9898 20562056 702702 8989 20322032 20852085
WBCsWBCs RBCRBC controlcontrol 132132 4.634.63 0.410.41 0.040.04 4.634.63 4.674.67 0.0660.066
Patients Patients 9898 4.284.28 0.590.59 0.080.08 4.274.27 4.244.24
WBCsWBCs HemoglobinHemoglobin controlcontrol 132132 13.8313.83 1.311.31 0.130.13 13.8313.83 13.6013.60 0.0710.071
Patients Patients 9898 12.8312.83 2.492.49 0.320.32 12.7712.77 12.8012.80
WBCsWBCs monocytes %monocytes% controlcontrol 132132 6.816.81 1.861.86 0.180.18 6.776.77 6.606.60 0.0420.042
Patients Patients 9898 6.116.11 2.622.62 0.330.33 5.965.96 5.905.90
WBCsWBCs eosinophil %eosinophil% controlcontrol 132132 2.632.63 2.212.21 0.210.21 2.402.40 2.102.10 0.0040.004
Patients Patients 9898 1.261.26 1.341.34 0.170.17 1.051.05 0.900.90
WBCsWBCs basophil %basophil% controlcontrol 132132 0.460.46 0.310.31 0.030.03 0.430.43 0.400.40 0.0000.000
Patients Patients 9898 0.280.28 0.180.18 0.020.02 0.260.26 0.200.20
Group StatisticsGroup statistics
CategoryCategory ParameterParameter StateState NN MeanMean S.D.S.D. S.E.S.E. 95% Mean95% Mean MedianMedian P valueP value
RatioRatio CD4/CD8 ratioCD4 / CD8 ratio controlcontrol 132132 1.531.53 0.630.63 0.050.05 1.491.49 1.421.42 0.0010.001
Patients Patients 9898 2.202.20 1.091.09 0.140.14 2.102.10 2.062.06
RatioRatio CD3+CD8+/CD3-CD56+(CTNR)CD3 + CD8 + / CD3-CD56 + (CTNR) controlcontrol 132132 2.272.27 1.961.96 0.170.17 2.062.06 2.002.00 0.2530.253
Patients Patients 9898 1.921.92 1.631.63 0.210.21 1.741.74 1.391.39
RatioRatio CTLs/TregCTLs / Treg controlcontrol 132132 1.971.97 1.061.06 0.090.09 1.871.87 1.711.71 0.0190.019
Patients Patients 9898 1.211.21 0.750.75 0.100.10 1.121.12 1.051.05
RatioRatio Th17/TregTh17 / Treg controlcontrol 132132 0.690.69 0.400.40 0.040.04 0.680.68 0.690.69 0.2200.220
Patients Patients 9898 0.500.50 0.280.28 0.040.04 0.470.47 0.440.44
RatioRatio TH1/TH2 ratioTH1 / TH2 ratio controlcontrol 132132 1.151.15 0.550.55 0.050.05 1.131.13 1.001.00 0.0000.000
Patients Patients 9898 0.910.91 0.430.43 0.050.05 0.890.89 0.920.92
이분형Binary 로지스틱Logistic 회귀분석 모형을 통한 대장 직장암 진단 방법 Rectal Colorectal Cancer Diagnosis Using Regression Model
상기 표 9 내지 18 에서 표시한 바와 같이 전체 정상인 132명 및 환자 98명의 말초혈액 면역세포를 분석한 결과, 유의수준 P value < 0.05 에서 두 그룹 간 차이를 보이는 면역세포의 마커가 존재함을 확인할 수 있었으며 표에서 볼드체 및 이탤릭 체로 표시한 부분이 유의미한 면역세포의 마커라 할 수 있다. 두 그룹 간 평균값의 차이는 통계프로그램 SPSS를 이용하여 분석하였다. 모집단이 정규분포를 따르고 등 분산 조건을 만족함으로 평균값의 통계적 차이는 T 검정 student's t-test를 사용하였다.As shown in Tables 9 to 18, peripheral blood immune cells of 132 normal and 98 patients were analyzed. As a result, markers of immune cells showing a difference between the two groups at the significance level P value <0.05 were found. The bold and italicized parts of the table are significant markers of immune cells. The difference in mean value between the two groups was analyzed using the statistical program SPSS. As the population follows the normal distribution and satisfies the equivariance condition, the statistical difference of the mean value was used by the T test student's t - test.
이를 통해 말초혈액 내의 각 면역세포의 분포도와 세포 수를 측정하고 암 면역력 특이적 면역세포 마커를 이용하여 대장 직장암 환자와 정상인을 정확하게 분류할 수 있으며, 면역력 검사를 통한 암 진단 역시 가능할 수 있다. 이와 같이 신뢰성 있는 암 진단을 위해 대장 직장암 환자와 정상인의 말초혈액 면역력 차이를 보다 극명하게 나타낼 수 있도록 수식화된 이분형 로지스틱 회귀분석 모형을 암 진단에 적용하게 되었다. Through this, the distribution and number of cells of each immune cell in peripheral blood can be measured and cancer colony-specific immune cell markers can be used to accurately classify colorectal cancer patients and normal persons, and cancer diagnosis through immunological tests may be possible. In order to reliably diagnose the cancer, a binary logistic regression model formulated to express the difference in peripheral blood immunity between colorectal cancer patients and normal people was applied to the diagnosis of cancer.
알고리즘을 완성하기 위해 대장 직장암 환자와 정상인을 종속 변수로 하여 각각 1과 0으로 변환하였으며 독립 변수로는 상기 표 9 내지 18에서 보는 바와 같이 면역세포 마커 결과 값을 사용하였다. 그러면서 정상인 132명과 대장 직장암 환자 98명의 두 그룹을 가장 잘 구분 지을 수 있는 항목을 선별하였다.To complete the algorithm, colorectal cancer patients and normal subjects were converted to 1 and 0, respectively, as dependent variables, and immune cell marker result values were used as independent variables as shown in Tables 9 to 18 above. In addition, the items that best distinguish the two groups of 132 normal and 98 colorectal cancer patients were selected.
Variables in the EquationVariables in the Equation
BB S.E.S.E. WaldWald dfdf Sig.Sig. Exp(B)Exp (B) 95%C.I.for Exp(B)95% C.I.for Exp (B)
LowerLower UpperUpper
Step 1aStep 1a CD4+%CD4 +% -.403-.403 .183.183 4.8414.841 1One .028.028 .668.668 .467.467 .957.957
Step 1aStep 1a CD3+CD8+%CD3 + CD8 +% -.468-.468 .175.175 7.1837.183 1One .007.007 .626.626 .445.445 .882.882
Step 1aStep 1a CD4+CD279+%CD4 + CD279 +% .961.961 .380.380 6.4006.400 1One .011.011 2.6132.613 1.2421.242 5.5005.500
Step 1aStep 1a CD4+CD25+%CD4 + CD25 +% .646.646 .248.248 6.8036.803 1One .009.009 1.9081.908 1.1741.174 3.1023.102
Step 1aStep 1a CD4+CD152+%CD4 + CD152 +% .001.001 .359.359 .000.000 1One .997.997 1.0011.001 .496.496 2.0232.023
Step 1aStep 1a CD279+% in CTLsCD279 +% in CTLs -.093-.093 .061.061 2.3282.328 1One .127.127 .911.911 .809.809 1.0271.027
Step 1aStep 1a CD152+% in CTLsCD152 +% in CTLs .131.131 .063.063 4.3714.371 1One .037.037 1.1401.140 1.0081.008 1.2901.290
Step 1aStep 1a CD3+CD272+%CD3 + CD272 +% .623.623 .246.246 6.4256.425 1One .011.011 1.8651.865 1.1521.152 3.0203.020
Step 1aStep 1a CD3+CD223+CD3 + CD223 + .479.479 .265.265 3.2653.265 1One .071.071 1.6141.614 .960.960 2.7142.714
Step 1aStep 1a Lymphocytes%Lymphocytes% -.221-.221 .152.152 2.1142.114 1One .146.146 .801.801 .595.595 1.0801.080
Step 1aStep 1a Neutrophils%Neutrophils% -.174-.174 .103.103 2.8632.863 1One .091.091 .840.840 .687.687 1.0281.028
Step 1aStep 1a NLRNLR -1.056-1.056 1.0431.043 1.0251.025 1One .311.311 .348.348 .045.045 2.6872.687
Step 1aStep 1a CTLs/TregCTLs / Treg 4.5764.576 1.6691.669 7.5187.518 1One .006.006 97.09697.096 3.6873.687 2556.9752556.975
Step 1aStep 1a CD314+CD158b-% in NK cellsCD314 + CD158b-% in NK cells -.011-.011 .025.025 .203.203 1One .652.652 .989.989 .942.942 1.0381.038
Step 1aStep 1a CD314-CD158b+% in NK cellsCD314-CD158b +% in NK cells .739.739 .254.254 8.4278.427 1One .004.004 2.0932.093 1.2711.271 3.4473.447
Step 1aStep 1a CD314+ in T cells CD314 + in T cells -.140-.140 .113.113 1.5411.541 1One .215.215 .870.870 .698.698 1.0841.084
Step 1aStep 1a Th1%Th1% .450.450 .272.272 2.7342.734 1One .098.098 1.5681.568 .920.920 2.6732.673
Step 1aStep 1a Th2%Th2% .074.074 .196.196 .141.141 1One .707.707 1.0761.076 .733.733 1.5821.582
Step 1aStep 1a TH1/TH2TH1 / TH2 -7.516-7.516 3.8713.871 3.7693.769 1One .052.052 .001.001 .000.000 1.0751.075
Step 1aStep 1a MDSCs cells/μLMDSCs cells / μL -.001-.001 .000.000 2.1332.133 1One .144.144 .999.999 .998.998 1.0001.000
Step 1aStep 1a monocytes%monocytes% .495.495 .284.284 3.0333.033 1One .082.082 1.6401.640 .940.940 2.8612.861
Step 1aStep 1a eosinophil%eosinophil% -1.866-1.866 .681.681 7.5027.502 1One .006.006 .155.155 .041.041 .588.588
Step 1aStep 1a basophil%basophil% -13.906-13.906 4.7584.758 8.5438.543 1One .003.003 .000.000 .000.000 .010.010
Step 1aStep 1a ConstantConstant 23.31723.317 16.39916.399 2.0222.022 1One .155.155
위 표 19는 23가지 면역세포 마커를 이용한 회귀분석 모형에서의 계수(B)와 상수(Constant)를 표시한 것이며, 표 상단의 항목에서 B는 B 추정값으로 회귀수식 모형에서 계수 값에 해당하고, S.E는 B 추정값에 대한 표준 오차 값, Wald는 (B 추정값/B 추정값의 표준 오차 값)의 제곱 값이다. 즉 (B/S.E.)2 를 의미하는 것으로 각 독립 변수의 유의성 검정을 위한 통계량을 의미한다. Df는 자유도, Sig.는 significance 유의확률을 의미하며 각 항목이 모형에서 차지하는 유의성을 의미하고, Exp(B)는 B값에 자연로그를 취한 eB를 의미하며, 각 독립변수가 1만큼 증가하면 내부값이 0인 집단에 속할 확률보다 내부 값이 1인 집단에 속할 확률이 몇 배인가를 나타내는 통계량이다.Table 19 above shows coefficients (B) and constants in a regression analysis model using 23 immune cell markers. In the items at the top of the table, B is a B estimate and corresponds to a coefficient value in a regression model. SE is the standard error value for the B estimate, and Wald is the square of (the standard error value of the B estimate / B estimate). In other words, it means (B / SE) 2, which means a statistic for significance test of each independent variable. Df means degrees of freedom, Sig. Means significance, and the significance of each item in the model, Exp (B) means e B with natural logarithm of B , and each independent variable increases by 1. This is a statistic that indicates how many times the probability of belonging to a group having an internal value of 1 is greater than that of a group having an internal value of 0.
위 상수(Constant)와 계수(B)를 이용한 로지스틱 회귀분석 수식은 다음과 같다.The logistic regression formula using the constant and coefficient (B) is as follows.
Figure PCTKR2018000505-appb-I000004
= 23.317-0.403(CD4+ %)-0.468(CD3+CD8+ %)+0.961(CD4+CD279+ %)+0.646(CD4+CD25+ %)+0.001(CD4+CD152+ %)-0.093(CD279+ % in CTLs)+0.131(CD152+ % in CTLs)+0.623(CD3+CD272+ %)+0.479(CD3+CD223+)-0.221(Lymphocytes %)-0.174(Neutrophils %)-1.056(NLR)+4.576(CTLs/Treg)-0.011(CD314+CD158b- % in NK cells)+0.739(CD314-CD158b+ % in NK cells)-0.140(CD314+ in T cells)+0.450(Th1 %)+0.074(Th2 %)-7.516(TH1/TH2) -0.001(MDSCs cells/μL)+0.495(monocytes %)-1.866(eosinophil %)-13.906(basophil %)
Figure PCTKR2018000505-appb-I000004
= 23.317-0.403 (CD4 +%)-0.468 (CD3 + CD8 +%) + 0.961 (CD4 + CD279 +%) + 0.646 (CD4 + CD25 +%) + 0.001 (CD4 + CD152 +%)-0.093 (CD279 +% in CTLs) +0.131 (CD152 +% in CTLs) +0.623 (CD3 + CD272 +%) + 0.479 (CD3 + CD223 +)-0.221 (Lymphocytes%)-0.174 (Neutrophils%)-1.056 (NLR) +4.576 (CTLs / Treg) -0.011 (CD314 + CD158b-% in NK cells) +0.739 (CD314-CD158b +% in NK cells) -0.140 (CD314 + in T cells) +0.450 (Th1%) + 0.074 (Th2%)-7.516 (TH1 / TH2) -0.001 (MDSCs cells /μL)+0.495 (monocytes%)-1.866 (eosinophil%)-13.906 (basophil%)
다만, 23가지 항목을 이용해 만든 알고리즘의 경우 실제 전향적으로 암 환자와 정상인을 블라인드 테스트로 검증하였을 때 민감도와 특이도가 떨어지는 경향이 있을 수 있다. 그리고 로지스틱 회귀분석 함수를 구성하는 항목이 23가지로 너무 많다 보니 실제로는 23가지 항목 가운데서도 가중치가 더 높은 항목에 의해 결과 값이 크게 좌우될 수 있고, 더 많은 인자에 대한 데이터가 요구되기 때문에 신속한 검사에 저해요소로 작용할 수 있다. 따라서 보다 바람직하게는 11가지 인자의 조합으로 구성되는 아래와 같은 로지스틱 회귀함수를 사용할 수 있다.However, in the case of algorithms using 23 items, sensitivity and specificity may tend to be inferior when a blind test is performed on cancer patients and normal people. And since there are so many 23 items that make up the logistic regression function, in fact, among the 23 items, the result value can be largely influenced by the higher weight item, and the data for more factors are required. May act as an inhibitor in testing. Therefore, more preferably, the following logistic regression function consisting of a combination of 11 factors can be used.
Figure PCTKR2018000505-appb-I000005
= -17.461+0.039(CD3 %)+0.141(NK %)+0.320(CD4CD279 %)+0.196(CD4+CD25+ %)-0.105(CD4+CD152+ %)+0.157(CD3+CD366+ %)+0.243(CD3+CD272+ %)+0.006(CD3+CD223+ %)+0.350(CD158b+CD314-CD3-CD56+ %)+0.143(Th2 %)+0.001(MDSCs cells/μL)
Figure PCTKR2018000505-appb-I000005
= -17.461 + 0.039 (CD3%) + 0.141 (NK%) + 0.320 (CD4CD279%) + 0.196 (CD4 + CD25 +%)-0.105 (CD4 + CD152 +%) + 0.157 (CD3 + CD366 +%) + 0.243 (CD3 + CD272 +%) + 0.006 (CD3 + CD223 +%) + 0.350 (CD158b + CD314-CD3-CD56 +%) + 0.143 (Th2%) + 0.001 (MDSCs cells / μL)
위와 같이 면역세포를 유세포분석하여 결과 값을 얻게 되면 각각의 결과 값과 계수 값을 곱하여 상수 값과 함께 합산하고 Logit(P) 값을 구하게 된다. 이때 대장 직장암 환자와 정상인을 1과 0으로 치환한 바와 같이 회귀분석 수식을 이용하여 암을 진단하는 것이 목적이므로 어떠한 임의의 신규 테스트 결과 값을 알고리즘에 입력하여 1과 0 사이 어떠한 값이 관측되는지를 파악하고 대장 직장암 환자인지 정상인인지 예측하는 것이 필요하다. 따라서 선형 방정식 모델 값인 Logit(P)를 지수함수를 이용하여 1과 0의 값에 수렴하도록 변환할 수 있다. 이때 지수 함수를 이용하여 대장 직장암 환자(1의 값을 나타냄)와 정상인(0의 값을 나타냄)으로 분류 되는 예측 수식은 다음 수학식 3과 같다.As a result of flow cytometry analysis of immune cells to obtain the result value, each result value and the coefficient value are multiplied and summed together with a constant value to obtain a Logit (P) value. In this case, as the purpose of diagnosing cancer by using a regression formula is to replace the colorectal cancer patients and normal people with 1 and 0, it is necessary to input any new test result value into the algorithm to see what value is observed between 1 and 0. It is necessary to identify and predict whether or not people with colorectal cancer are normal. Therefore, Logit (P), a linear equation model value, can be converted to converge to the values of 1 and 0 using the exponential function. In this case, a predictive formula classified into colorectal cancer patients (representing a value of 1) and normal persons (representing a value of 0) by using an exponential function is shown in Equation 3 below.
Figure PCTKR2018000505-appb-M000003
Figure PCTKR2018000505-appb-M000003
수학식 3에서와같이 대장 직장암 환자와 정상인의 에측 Y 값은 eP 를 분자로 1-eP를 분모로 하여 구하는데 확률 Y 값을 본 발명에서 E score라고 명명한다.As shown in Equation 3, the predictive Y value of colorectal cancer patients and normal subjects is e P Is obtained by denominator 1-e P as the denominator, and the probability Y value is named E score in the present invention.
도 9는 본 발명의 바람직한 일 실시예에 따른 E score를 이용하여 만든 Receiver operating characteristic curve이다.9 is a receiver operating characteristic curve made using the E score according to an embodiment of the present invention.
도 9에서 보는 바와 같이 E score에 대한 Receiver operating characteristic (ROC) curve를 그리게 되면 AUC 값이 0.98이 되는 것을 알 수 있고, 이는 말초혈액 면역력을 바탕으로 한 대장 직장암 진단이 가능하다는 것을 의미한다고 볼 수 있다.As shown in FIG. 9, when the receiver operating characteristic (ROC) curve for the E score is drawn, it can be seen that the AUC value is 0.98, which means that colorectal cancer can be diagnosed based on peripheral blood immunity. have.
cut valuecut value sensitivity(sensitivity ( %% )) specificity(specificity ( %% )) Youden'sYouden's index index
0.0980.098 100100 78.478.4 1.7841.784
0.5480.548 88.188.1 96.996.9 1.8511.851
0.6840.684 83.183.1 100100 1.8311.831
표 20은 상기 E score 결과 값에 따른 민감도, 특이도 및 유덴 인덱스(Youden index) 값을 나타낸 것으로, 상기 표 20에서 보는 바와 같이 E score 결과 값의 민감도와 특이도에 대한 cut value를 임의 조정할 수 있는데 cut value를 0.098로 잡게 되면 민감도는 100%이면서 특이도는 78.4%가 되고, cut value를 0.684로 잡게 되면 민감도는 83.1%이면서 특이도는 100%인 것을 알 수 있다. 이것은 E score < 0.098 에서는 모두 정상인이라 할 수 있으며 마찬가지로 0.684 < E score 에서는 모두 대장 직장암 환자라고 진단할 수 있음을 보여 주는 것이다.Table 20 shows sensitivity, specificity, and Youden index values according to the E score result value. As shown in Table 20, cut values for sensitivity and specificity of the E score result value can be arbitrarily adjusted. When the cut value is 0.098, the sensitivity is 100% and the specificity is 78.4%. When the cut value is 0.684, the sensitivity is 83.1% and the specificity is 100%. This indicates that all of them are normal at E score <0.098 and similarly diagnosed as colorectal cancer patients at 0.684 <E score.
즉, 상기 선형 방정식의 값을 이용하여 암환자와 정상인의 값이 각각 1과 0으로 수렴하는 지수함수를 설계하고 ROC curve 상에서 Youden index를 통하여 0과 1 사이의 최적의 cut value를 구한 다음 이를 기준으로 암 발병 유무를 진단할 수 있는 이분형 로지스틱 회귀분석 알고리즘을 설계할 수 있다.In other words, we design an exponential function where the values of cancer patients and normal people converge to 1 and 0 using the values of the linear equations, and then obtain the optimal cut value between 0 and 1 through the Youden index on the ROC curve. As a result, a binary logistic regression algorithm can be designed to diagnose cancer.
또한, 후향적으로(retrospective) 설계된 상기 알고리즘을 통해 계산된 값을 이용하여 신규 정상인과 암 환자를 무작위로 블라인드 테스트(blind test)하여 전향적으로 말초혈액의 면역력을 평가하고 암을 진단할 수 있게 된다.In addition, randomly blind tests of new normal and cancer patients using the values calculated through the retrospective designed algorithm can be used to prospectively evaluate the immunity of peripheral blood and diagnose cancer. do.
도 10은 본 발명의 바람직한 일 실시예에 따른 2개의 E score cut value를 이용하여 암 면역력을 E1 E2 E3의 3단계로 제공하는 모형을 도시한 도면이다.10 is a diagram showing a model for providing cancer immunity in three steps of E1 E2 E3 using two E score cut values according to an embodiment of the present invention.
도 10을 참조하면, 말초혈액 면역력을 이용한 로지스틱 회귀분석 진단에 있어 반드시 cut value를 하나로 규정지을 필요는 없다는 것을 알 수 있다. 따라서 본 발명에 따르면 E score의 cut value를 0.098과 0.684를 기준으로 세 구간으로 구분하고 E score 결과에 따른 암 면역력을 3단계로 구분하여 진단할 수 있다. E socre ≤ 0.098 구간은 정상인이면서 E1으로 명명하고 0.098 < E score ≤ 0.684 구간은 암 고위험군으로서 E2라 명명하며 0.684 < E score 구간은 대장 직장암 환자로 E3라고 명명하고 진단할 수 있다.Referring to FIG. 10, it can be seen that it is not necessary to define cut values as one in a logistic regression analysis using peripheral blood immunity. Therefore, according to the present invention, the cut value of the E score may be divided into three sections based on 0.098 and 0.684, and the cancer immunity according to the E score result may be classified into three stages. Section E socre ≤ 0.098 is normal and named E1. Section 0.098 <E score ≤ 0.684 is a high-risk cancer group and is named E2. 0.684 <E score is colorectal cancer patients.
본 발명에서는 대장 직장암 수술 전 환자를 예를 들어 말초혈액 면역력을 이용하여 정상인(E1)과 암 고위험군(E2) 및 대장 직장암 환자(E3)로 진단을 하였지만 방법론적으로 대장 직장암에만 한정되지 않고 다른 암 종에서도 적용될 수 있음은 물론이다. 또한, 23가지 또는 11가지 면역세포 마커를 이용하여 만든 회귀모형은 향후 새롭게 발굴되는 마커를 이용하여 민감도와 특이도를 높여 암 진단의 유용성을 극대화 할 수 있으며, 본 발명에서 제시한 23가지 또는 11가지 항목이 아닌 새로운 조합에 의해서도 회귀 모형이 만들어지고 암 진단에 사용될 수 있을 것이다.In the present invention, a patient before surgery for colorectal cancer is diagnosed as a normal person (E1), a high risk group of cancer (E2), and a colorectal cancer patient (E3) using, for example, peripheral blood immunity. Of course, it can also be applied to species. In addition, the regression model made using 23 or 11 immune cell markers can maximize the usefulness of cancer diagnosis by increasing the sensitivity and specificity by using newly discovered markers, and the 23 or 11 proposed in the present invention. New combinations, rather than branch items, can also be used to diagnose and regress models.
이상에서 본 발명이 구체적인 구성요소 등과 같은 특정 사항들과 한정된 실시예 및 도면에 의해 설명되었으나, 이는 본 발명의 보다 전반적인 이해를 돕기 위해서 제공된 것일 뿐, 본 발명이 상기 실시예들에 한정되는 것은 아니며, 본 발명이 속하는 기술분야에서 통상적인 지식을 가진 자라면 이러한 기재로부터 다양한 수정 및 변형을 꾀할 수 있을 것이다.Although the present invention has been described by specific embodiments such as specific components and the like, but the embodiments and the drawings are provided to assist in a more general understanding of the present invention, the present invention is not limited to the above embodiments. However, one of ordinary skill in the art will be able to make various modifications and variations from this description.
따라서, 본 발명의 사상은 상기 설명된 실시예에 국한되어 정해져서는 아니 되며, 후술하는 특허청구범위뿐만 아니라 이 특허청구범위와 균등하게 또는 등가적으로 변형된 모든 것들은 본 발명 사상의 범주에 속한다고 할 것이다.Accordingly, the spirit of the present invention should not be limited to the above-described embodiments, and all of the equivalents or equivalents of the claims, as well as the appended claims, belong to the scope of the present invention. something to do.

Claims (23)

  1. 대장 직장암 환자와 정상인의 말초혈액 내 면역세포의 분포 차이를 이용하여 말초혈액의 면역력을 평가하고 이를 이용해 대장 직장암 발병 유무에 대한 정보를 제공하는 방법에 있어서,In the method of evaluating the immunity of peripheral blood using the difference in the distribution of immune cells in peripheral blood of colorectal cancer patients and normal people, and using the same to provide information on the presence of colorectal cancer,
    (A) 말초혈액 면역세포의 중 세포 크기 및 주름진 정도를 분석해 림프구세포(lymphocytes), 단핵구세포(monocytes), 및 과립구(granulocytes)를 분류하는 단계;(A) classifying lymphocytes, monocytes, and granulocytes by analyzing the medium cell size and the degree of wrinkles of peripheral blood immune cells;
    (B) 적어도 하나의 항체 조합으로 상기 세 종류의 면역세포의 표지 마커를 염색하여 암환자와 정상인의 말초혈액 내 면역세포의 분포를 분석하는 단계;(B) analyzing the distribution of immune cells in peripheral blood of cancer patients and normal persons by staining the markers of the three types of immune cells with at least one antibody combination;
    (C) 암환자와 정상인 사이에서 암 발생 유무를 판별할 수 있도록 암환자와 정상인 두 집단에서 유의미한 표지 마커의 결과 값이 통계적 유의성을 보이면서 차이가 나는 조합을 판별하는 단계; 및(C) determining a combination of differences in cancer markers and normal persons with statistically significant result values of the marker markers in the two cancer patients and normal populations so as to determine whether cancer has occurred; And
    (D) 상기 표지 마커를 이용해 유세포분석기나 세포 계수기 등을 이용한 자연살해 세포의 계수 없이도 단위 혈액당 면역력을 측정하여 대장 직장암 발병 유무를 진단하는 단계를 포함하는 방법.(D) a method for diagnosing the presence of colorectal cancer by measuring the immunity per blood without counting natural killer cells using a flow cytometer or a cell counter using the marker marker.
  2. 제 1항에 있어서,The method of claim 1,
    상기 (A) 단계에서 면역세포를Immune cells in the step (A)
    1) NK cells(NKC)1) NK cells (NKC)
    2) Th1Th2(TH)2) Th1Th2 (TH)
    3) Myeloid Derived Stem Cells(MDSCs)3) Myeloid Derived Stem Cells (MDSCs)
    4) Regulatory T cells(Tregs)4) Regulatory T cells (Tregs)
    5) Cytotoxic T cells(CTLs)5) Cytotoxic T cells (CTLs)
    6) Exhausted T cells(ETc)6) Exhausted T cells (ETc)
    7) Immune checkpoint(ICP)7) Immune checkpoint (ICP)
    8) Gamma-delta T cells(GDT)8) Gamma-delta T cells (GDT)
    9) White blood cell subtype(WBCS)9) White blood cell subtype (WBCS)
    와 같이 9가지 군으로 분류하여 분석하는 것을 특징으로 하는 방법.The method characterized in that the analysis divided into nine groups.
  3. 제 2항에 있어서, The method of claim 2,
    상기 (B) 단계에서, NK cells(NKC), Th1Th2(TH), Myeloid Derived Stem Cells(MDSCs), Regulatory T cells(Tregs), Cytotoxic T cells(CTLs), Exhausted T cells(ETc), Immune checkpoint(ICP), 또는 Gamma-delta T cells(GDT) 세포 분석은 유세포분석기를 이용하여 이루어지고, White blood cell subtype(WBCS)에 포함되는 WBC, Lymphocytes, Neutrophils, Monocytes, Basophils, 또는 Eosinophils 세포 분석은 자동혈구분석기를 통하여 이루어지는 것을 특징으로 하는 방법.In the step (B), NK cells (NKC), Th1Th2 (TH), Myeloid Derived Stem Cells (MDSCs), Regulatory T cells (Tregs), Cytotoxic T cells (CTLs), Exhausted T cells (ETc), Immune checkpoint ( ICP), or Gamma-delta T cells (GDT) cell analysis is performed using a flow cytometer, and WBC, Lymphocytes, Neutrophils, Monocytes, Basophils, or Eosinophils cell assays included in the white blood cell subtype (WBCS) Method through the analyzer.
  4. 제 2항에 있어서,The method of claim 2,
    상기 (B) 단계에서,In the step (B),
    NK cells(NKC), Th1Th2(TH), Myeloid Derived Stem Cells(MDSCs), Exhausted T cells(ETc), Gamma-delta T cells(GDT) 면역세포는 세포막(Cell surface) 표지 마커를 형광 염색하고,NK cells (NKC), Th1Th2 (TH), Myeloid Derived Stem Cells (MDSCs), Exhausted T cells (ETc), Gamma-delta T cells (GDT) immune cells were fluorescently stained cell surface marker markers,
    Regulatory T cells(Tregs), Cytotoxic T cells(CTLs), Immune checkpoint(ICP) 면역세포는 세포 표면(Cell surface) 또는 세포 안(Intracellular) 표지 마커를 형광 염색하여 유세포분석기를 이용하여 분석하는 것을 특징으로 하는 방법.Regulatory T cells (Tregs), Cytotoxic T cells (CTLs), and Immune checkpoint (ICP) immune cells are characterized by fluorescence staining of cell surface or intracellular marker markers for analysis using a flow cytometer. How to.
  5. 제 1항에 있어서,The method of claim 1,
    상기 (B) 단계에서 면역세포에서 발현되는 표지 마커를 토대로 각각의 마커에 대한 면역세포의 표현형을 분포도(%)와 세포수 및 그 비율로 분석하는 것을 특징으로 하는 방법.Method (B) is characterized in that the analysis of the phenotype of the immune cells for each marker based on the markers expressed in the immune cells in the distribution (%), the number of cells and the ratio thereof.
  6. 제 1항에 있어서,The method of claim 1,
    상기 (C) 단계에서, 암환자와 정상인을 분류할 수 있는 유의미한 표지 마커의 조합으로 통계학적 방법으로 P 값을 도출하고 상기 P 값이 소정기준을 충족시키는지 여부를 판별하는 것을 특징으로 하는 방법.In step (C), a method is characterized by deriving a P value by a statistical method using a combination of meaningful marker markers that can classify cancer patients and normal persons, and determining whether the P value satisfies a predetermined criterion. .
  7. 제 6항에 있어서,The method of claim 6,
    NK cells(NKC)을 평균 분포도 및 세포수를 기준으로 CD314-CD158b- % in NK cells, CD314-CD158b+ % in NK cells, CD314-CD158b+ cells/μL in NK cells, CD314+ in CD3+CD56- (T cells)에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.NK cells (NKC) based on average distribution and number of cells CD314-CD158b-% in NK cells, CD314-CD158b +% in NK cells, CD314-CD158b + cells / μL in NK cells, CD314 + in CD3 + CD56- (T cells ) Wherein the P value satisfies a predetermined criterion.
  8. 제 6항에 있어서,The method of claim 6,
    Th1Th2(TH)을 평균 분포도 및 세포수를 기준으로 CD4+ %, CD4+ cells/μL, Th1 %, Th2 %, Th2 cells/μL, Th17 cells/μL에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Th1Th2 (TH) is characterized in that the P value meets a predetermined criterion in CD4 +%, CD4 + cells / μL, Th1%, Th2%, Th2 cells / μL, Th17 cells / μL based on the average distribution and the number of cells. Way.
  9. 제 6항에 있어서,The method of claim 6,
    Myeloid Derived Stem Cells(MDSCs)을 평균 분포도 및 세포수를 기준으로 MDSCs cells/μL에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Myeloid Derived Stem Cells (MDSCs) in the MDSCs cells / μL based on the average distribution and the number of cells characterized in that the P value meets a predetermined criterion.
  10. 제 6항에 있어서,The method of claim 6,
    Regulatory T cells(Tregs)을 평균 분포도 및 세포수를 기준으로 CD4+CD279+(PD-1) %, CD4+CD279+ cells/μL, CD4+CD25+ %, CD4+CD25+ cells/μL, CD4+CD152+(CTLA-4)%, CD4+CD152+ cells/μL에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Regulatory T cells (Tregs)% CD4 + CD279 + (PD-1)%, CD4 + CD279 + cells / μL, CD4 + CD25 +%, CD4 + CD25 + cells / μL, CD4 + CD152 + (CTLA-) 4)%, wherein the P value at CD4 + CD152 + cells / μL meets a predetermined criterion.
  11. 제 6항에 있어서,The method of claim 6,
    Cytotoxic T cells(CTLs)을 평균 분포도 및 세포수를 기준으로 CD3+CD8+ %, CD279+ % in CTLs, CD152+ % in CTLs, CD152+ cells/μL in CTLs에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Cytotoxic T cells (CTLs) in the CD3 + CD8 +%, CD279 +% in CTLs, CD152 +% in CTLs, CD152 + cells / μL in CTLs based on the average distribution and the number of cells characterized in that the P value meets the predetermined criteria Way.
  12. 제 6항에 있어서,The method of claim 6,
    Exhausted T cells(ETc)을 평균 분포도 및 세포수를 기준으로 CD279+TIGIT+ % in CTLs에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Exhausted T cells (ETc) in the CD279 + TIGIT +% in CTLs based on the average distribution and cell number, characterized in that the P value meets a predetermined criterion.
  13. 제 6항에 있어서,The method of claim 6,
    Immune checkpoint(ICP)을 평균 분포도 및 세포수를 기준으로 CD3+CD272+ %, CD3+CD223+ (LAG3)%, CD3+CD223+cells/μL, CD223+ % in Lymphocytes, CD223+ cells/μL in Lymphocytes에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.Immune checkpoint (ICP) was determined by CD3 + CD272 +%, CD3 + CD223 + (LAG3)%, CD3 + CD223 + cells / μL, CD223 +% in Lymphocytes, CD223 + cells / μL in Lymphocytes based on average distribution and cell number. Characterized by satisfying this predetermined criterion.
  14. 제 6항에 있어서,The method of claim 6,
    White blood cell subtype(WBCS)을 평균 분포도 및 세포수를 기준으로 WBC cells/μL, Lymphocytes %, Neutrophils %, Neutrophils cells/μL, Neutrophils/Lymphocytes, monocytes %, eosinophil %, basophil %에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.White blood cell subtype (WBCS) was determined based on the mean distribution and the number of cells in the WBC cells / μL, Lymphocytes%, Neutrophils%, Neutrophils cells / μL, Neutrophils / Lymphocytes, monocytes%, eosinophil%, basophil% Characterized by meeting the criteria.
  15. 제 6항에 있어서,The method of claim 6,
    암환자 및 정상인의 말초혈액 면역세포의 비(ratio)를 기준으로 CD4/CD8 ratio, TH1/TH2 ratio에서 상기 P 값이 소정 기준을 충족시키는 것을 특징으로 하는 방법.And the P value satisfies a predetermined criterion in the CD4 / CD8 ratio and the TH1 / TH2 ratio based on the ratio of peripheral blood immune cells of cancer patients and normal persons.
  16. 제 6항에 있어서,The method of claim 6,
    상기 P 값은 23.317-0.403(CD4+ %)-0.468(CD3+CD8+ %)+0.961(CD4+CD279+ %)+0.646(CD4+CD25+ %)+0.001(CD4+CD152+ %)-0.093(CD279+ % in CTLs)+0.131(CD152+ % in CTLs)+0.623(CD3+CD272+ %)+0.479(CD3+CD223+)-0.221(Lymphocytes %)-0.174(Neutrophils %)-1.056(NLR)+4.576(CTLs/Treg)-0.011(CD314+CD158b- % in NK cells)+0.739(CD314-CD158b+ % in NK cells)-0.140(CD314+ in T cells)+0.450(Th1 %)+0.074(Th2 %)-7.516(TH1/TH2) -0.001(MDSCs cells/μL)+0.495(monocytes %)-1.866(eosinophil %)-13.906(basophil %)으로 표현되는 선형방정식에 의하여 구해지는 것을 특징으로 하는 방법.The P value is 23.317-0.403 (CD4 +%)-0.468 (CD3 + CD8 +%) + 0.961 (CD4 + CD279 +%) + 0.646 (CD4 + CD25 +%) + 0.001 (CD4 + CD152 +%)-0.093 (CD279 +% in CTLs ) +0.131 (CD152 +% in CTLs) +0.623 (CD3 + CD272 +%) + 0.479 (CD3 + CD223 +)-0.221 (Lymphocytes%)-0.174 (Neutrophils%)-1.056 (NLR) +4.576 (CTLs / Treg) -0.011 (CD314 + CD158b-% in NK cells) +0.739 (CD314-CD158b +% in NK cells) -0.140 (CD314 + in T cells) +0.450 (Th1%) + 0.074 (Th2%)-7.516 (TH1 / TH2) -0.001 (MDSCs cells / μL) +0.495 (monocytes%)-1.866 (eosinophil%)-13.906 (basophil%).
  17. 제 6항에 있어서,The method of claim 6,
    상기 P 값은 -17.461+0.039(CD3 %)+0.141(NK %)+0.320(CD4CD279 %)+0.196(CD4+CD25+ %)-0.105(CD4+CD152+ %)+0.157(CD3+CD366+ %)+0.243(CD3+CD272+ %)+0.006(CD3+CD223+ %)+0.350(CD158b+CD314-CD3-CD56+ %)+0.143(Th2 %)+0.001(MDSCs cells/μL)으로 표현되는 선형방정식에 의하여 구해지는 것을 특징으로 하는 방법.The P value is -17.461 + 0.039 (CD3%) + 0.141 (NK%) + 0.320 (CD4CD279%) + 0.196 (CD4 + CD25 +%)-0.105 (CD4 + CD152 +%) + 0.157 (CD3 + CD366 +%) + 0.243 (CD3 + CD272 +%) + 0.006 (CD3 + CD223 +%) + 0.350 (CD158b + CD314-CD3-CD56 +%) + 0.143 (Th2%) + 0.001 (MDSCs cells / μL) How to feature.
  18. 제 1항에 있어서,The method of claim 1,
    상기 (D) 단계에서,In the step (D),
    (D-1) 암 환자와 정상인을 분류할 수 있는 적어도 하나의 유의미한 표지 마커의 조합값을 계수로 하는 선형 방정식을 설계하는 단계;(D-1) designing a linear equation whose coefficient is a combination of at least one significant marker marker capable of classifying a cancer patient with a normal person;
    (D-2) 상기 선형 방정식의 값을 이용하여 암환자와 정상인의 값이 각각 1과 0으로 수렴하는 지수함수를 설계하고 ROC curve 상에서 Youden index를 통하여 0과 1 사이의 최적의 cut value를 구한 다음 이를 기준으로 암 발병 유무를 진단할 수 있는 이분형 로지스틱 회귀분석 알고리즘을 설계하는 단계; 및(D-2) Designing an exponential function where the values of cancer patients and normal people converge to 1 and 0, respectively, using the values of the linear equation, and obtain the optimal cut value between 0 and 1 through the Youden index on the ROC curve. Then designing a binary logistic regression algorithm for diagnosing cancer on the basis of this; And
    (D-3) 후향적으로(retrospective) 설계된 상기 알고리즘을 통해 계산된 값을 이용하여 신규 정상인과 암 환자를 무작위로 블라인드 테스트(blind test)하여 전향적으로 말초혈액의 면역력을 평가하고 암을 진단하는 단계를 포함하는 것을 특징으로 하는 방법.(D-3) A random blind test of new normal and cancer patients using the values calculated through the retrospective designed algorithm to prospectively evaluate the immunity of peripheral blood and diagnose cancer The method comprising the step of.
  19. 제 18항에 있어서,The method of claim 18,
    상기 유의미한 표지 마커의 조합 값은 CD4+ %, CD3+CD8+ %, CD4+CD279+ %, CD4+CD25+ %, CD4+CD152+ %, CD279+ % in CTLs, CD152+ % in CTLs, CD3+CD272+ %, CD3+CD223+, Lymphocytes %, Neutrophils %, NLR, CTLs/Treg, CD314+CD158b- % in NK cells. CD314-CD158b+ % in NK cells, CD4314+ in T cells, Th1 %, Th2 %, TH1/TH2, MDSCs cells/μL, monocytes %, eosinophil %, 내지 basophil % 중 적어도 하나를 포함하는 것을 특징으로 하는 방법.Combination values of the significant marker markers are CD4 +%, CD3 + CD8 +%, CD4 + CD279 +%, CD4 + CD25 +%, CD4 + CD152 +%, CD279 +% in CTLs, CD152 +% in CTLs, CD3 + CD272 +%, CD3 + CD223 +, Lymphocytes%, Neutrophils%, NLR, CTLs / Treg, CD314 + CD158b-% in NK cells. CD314-CD158b +% in NK cells, CD4314 + in T cells, Th1%, Th2%, TH1 / TH2, MDSCs cells / μL, monocytes%, eosinophil%, to basophil%.
  20. 제 18항에 있어서,The method of claim 18,
    상기 유의미한 표지 마커의 조합 값은 CD3, NK, CD4CD279, CD4+CD25+, CD4+CD152, CD3+CD366+, CD3+CD272, CD3+CD223+, CD158b+CD314-CD3-CD56+, Th2, 내지 MDSCs cells/μL 중 적어도 하나를 포함하는 것을 특징으로 하는 방법.Combination values of these significant marker markers are among CD3, NK, CD4CD279, CD4 + CD25 +, CD4 + CD152, CD3 + CD366 +, CD3 + CD272, CD3 + CD223 +, CD158b + CD314-CD3-CD56 +, Th2, and MDSCs cells / μL And at least one.
  21. 제 18항에 있어서,The method of claim 18,
    상기 (D-3) 단계에서,In the step (D-3),
    민감도 및 특이도를 기준으로 민감도가 소정 설정 값인 지점의 상기 이분형 로지스트 회귀분석 알고리즘을 통하여 계산된 값을 제1 cut value 값으로 특이도가 소정 설정 값인 지점의 상기 알고리즘을 통하여 계산된 값을 제2 cut value 값으로 설정하여 상기 알고리즘을 통하여 계산된 값이 상기 제1 cut value 값 이하인 그룹을 정상, 제1 cut value 값과 제2 cut value 값 사이인 그룹을 암 발생 고위험군, 제2 cut value 값 이상인 그룹을 암환자로 진단하는 것을 특징으로 하는 방법.Based on the sensitivity and the specificity, the value calculated through the binary logistic regression algorithm at the point where the sensitivity is a predetermined set value is a first cut value, and the value calculated through the algorithm at the point where the specificity is a predetermined set value. A second cut value is set so that a value calculated by the algorithm is equal to or less than the first cut value value is normal, and a group between the first cut value and the second cut value value is a high risk group of cancer occurrence, and the second cut value. A method for diagnosing a cancer patient with a group above the value.
  22. 제 1항 내지 제 21항 중 어느 한 항에 따른 방법을 실행하기 위한 컴퓨터 프로그램을 기록한 컴퓨터로 판독 가능한 기록 매체.A computer-readable recording medium having recorded thereon a computer program for executing the method according to any one of claims 1 to 21.
  23. 제 1항 내지 제 21항 중 어느 한 항에 따른 방법에 의해 대장 직장암 발병 유무에 대한 정보를 제공하는 진단키트.A diagnostic kit for providing information on the presence of colorectal cancer by the method according to any one of claims 1 to 21.
PCT/KR2018/000505 2017-06-02 2018-01-11 Method for assessing immunity and providing information on whether or not the onset of cancer has begun by utilizing difference in immune cell distribution between peripheral blood of colorectal cancer patient and normal person, and diagnostic kit using same WO2018221820A1 (en)

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