WO2013135933A1 - Method for the label-free identification of viruses and bacteria, using compact disc technology - Google Patents

Method for the label-free identification of viruses and bacteria, using compact disc technology Download PDF

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Publication number
WO2013135933A1
WO2013135933A1 PCT/ES2013/070158 ES2013070158W WO2013135933A1 WO 2013135933 A1 WO2013135933 A1 WO 2013135933A1 ES 2013070158 W ES2013070158 W ES 2013070158W WO 2013135933 A1 WO2013135933 A1 WO 2013135933A1
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bacteria
virus
disk
disc
group
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PCT/ES2013/070158
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Spanish (es)
French (fr)
Inventor
Ángel MAQUIEIRA CATALÀ
Sergi Beñat MORAIS EZQUERRO
Rosa PUCHADES PLÀ
Luís Antonio TORTAJADA GENARO
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Universitat Politècnica De València
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Publication of WO2013135933A1 publication Critical patent/WO2013135933A1/en

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    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/17Systems in which incident light is modified in accordance with the properties of the material investigated
    • G01N21/47Scattering, i.e. diffuse reflection
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/75Systems in which material is subjected to a chemical reaction, the progress or the result of the reaction being investigated
    • G01N21/77Systems in which material is subjected to a chemical reaction, the progress or the result of the reaction being investigated by observing the effect on a chemical indicator
    • G01N21/82Systems in which material is subjected to a chemical reaction, the progress or the result of the reaction being investigated by observing the effect on a chemical indicator producing a precipitate or turbidity
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/543Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
    • G01N33/551Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals the carrier being inorganic
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • G01N33/56911Bacteria
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/569Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
    • G01N33/56983Viruses

Definitions

  • the present invention focuses on the biotechnology sector, specifically in the analysis for the identification and detection of bacteria and / or viruses without marking.
  • the main applications of the invention occur in epidemiological surveillance, quality control of water and air, and in general any area that involves the detection of bacteria by biospecific interactions based on the use of separate and ordered molecular receptors on a support.
  • ES2288429B2 (Polytechnic University of Valencia, 2006) describes a method of chemical modification of a compact disk, intended as a support for the covalent immobilization of biomolecules, while maintaining the optical and mechanical properties of the compact disk.
  • the covalent immobilization of the biomolecules is carried out in an established order and arrangement constituting an array or microarray on the polymer surface of the compact disk.
  • the covalent bonds of the method described in ES2288429B2 in most cases are irreversible.
  • the covalent bond is more durable over time compared to electrostatic interactions as well as hydrophilic / hydrophobic interactions, allowing the type of binding of biomolecules to the polymeric surface to be stronger to resist Better the washes.
  • Biomolecules are labeled for direct or indirect detection by conjugation with a fluorochrome or with an enzyme.
  • EP1324042A2 (José Reclame, 2001) describes a method for the detection and / or quantification of molecules anchored to capture molecules that are fixed on the surface of a compact disk by expensive and complicated means. The described method allows readings and / or biological detections to be made on one side of the disk, while on the other side, readings or recordings of the obtained fluorescence signals can be made.
  • ES2304093A1 (Polytechnic University of Valencia, 2006) describes an integrated data storage system for chemical analysis of samples and for detection and storage of analytical results.
  • the described system is capable of capturing the analytical results obtained on one side of a data storage disk and obtaining its transposition into digital data for further processing and / or recording on the other side of the disk.
  • the system comprises a compact disc (CD / DVD) as a support as well as a CD / DVD reader / writer for the detection of fluorescence signals.
  • US2007 / 0026382A1 (ALIX YALE & RISTAS LLP, 2006) describes an alternative method to flow cytometry for detection of phenotypes and determination of functional responses in cells, based on a technology without dizziness, on a biosensitive surface, which can be a chip or a plate (biosensor chip), preferably coated with gold.
  • the biosensitive surface described comprises an array of specific capture ligands for cell surface markers so that a specific phenotype correlates with a specific interaction location on the chip.
  • the type of cells that can be analyzed includes animal, plant and bacterial cells.
  • the interaction between the cells and the specific capture ligands is read by a CCD camera or a CMOS camera.
  • the present invention comprises a rapid analysis methodology for the identification and detection without detection of Gram + and Gram - viruses and bacteria, resistant or not to antibiotics, using as audio-video discs (CD, DVD, BD, Lightscribe, Superdisk, etc.) where to immobilize specific molecular receptors of biomolecules present on the surface of bacteria and / or viruses, using as a detector a disk reader / writer (CD, DVD, BD, Lightscribe, etc.).
  • the present invention has been designed to identify separate immobilized receptors or bioreceptors on the polycarbonate face of the disk and in known and orderly positions, forming a microarray.
  • the Specific bioreceptors of biomolecules present on the surface of viruses and / or bacteria may be for example polysaccharides, proteins, lipids and nucleic acids.
  • the present invention has been applied in the identification and detection of a pneumococcal suspension (Strepcococcus pneumoniae) previously isolated from a clinical sample and grown in solid media, as well as a suspension of Escherichia coli and Salmonella spp. .
  • the invention has been designed to identify specific polysaccharides present on the surface of said bacteria, using antiserum microarrays.
  • the method of identification and / or detection of viruses and / or bacteria object of the present invention comprises the following essential steps:
  • test sample from now on "sample" already obtained, for example a clinical sample, collected for example in a Petri dish and previously incubated in a solid medium (for example in blood agar, chocolate agar, etc.), for a sufficient time for the bacteria and / or viruses contained therein to grow abundantly (10 ⁇ -10 ⁇ ) on the surface of the plate (for example 16-24 h), until forming colonies.
  • a test sample for example a clinical sample, collected for example in a Petri dish and previously incubated in a solid medium (for example in blood agar, chocolate agar, etc.), for a sufficient time for the bacteria and / or viruses contained therein to grow abundantly (10 ⁇ -10 ⁇ ) on the surface of the plate (for example 16-24 h), until forming colonies.
  • the samples to be analyzed with the invention can be microbial isolates of diverse origin such as blood (blood culture), pleural fluid, cerebrospinal fluid, saliva, sputum, urine, tear secretion, etc.
  • Resuspension of the material from the bacteria and / or virus colonies in the sample is carried out, for example, by a 1 [iL planting handle that passes through the surface of the solid medium, to be added, for example, to a 1, 5 tube mL containing an adequate volume (for example between 100-500 ⁇ ) of a buffered aqueous solution (for example PBST, TBS-T, etc.) which is characterized by being compatible with the suspension of bacteria and / or viruses for its subsequent incubation on the disk.
  • a 1 [iL planting handle that passes through the surface of the solid medium, to be added, for example, to a 1, 5 tube mL containing an adequate volume (for example between 100-500 ⁇ ) of a buffered aqueous solution (for example PBST, TBS-T, etc.) which is characterized by being compatible with the suspension of bacteria and / or viruses for its subsequent incubation on the disk.
  • a buffered aqueous solution for example PBST, TBS-
  • a suspension of bacteria and / or viruses is obtained which is preferably homogenized before the next step to eliminate possible aggregates and thus facilitate interactions with the immobilized receptors on the surface of the compact disc.
  • disk on whose face of polycarbonate molecular receptors located on the surface of bacteria and / or viruses have been immobilized, being arranged in known and orderly positions, forming a microarray. These receptors make it possible to identify biomolecules from the surface of the virus and / or the bacteria, such as proteins, lipids, nucleic acids, or polysaccharides.
  • This step is called microarray printing on the disc.
  • the immobilization of the receptors on the disc can be performed by different methods (Hermanson, GT Bioconjugate Techniques. 2 * n Edition Academic Press, San Diego, CA. 2008), preferably but not limitingly, in a preferred embodiment of the present invention is carried out by immobilizing antibodies contained in antisera by disk adsorption, as described below.
  • the surface of the disk with the immobilized receivers must maintain the optical and mechanical properties of the disk, a key aspect for its reading by the disk reader / writer of the next step.
  • the disk is segmented into independent areas (for example between 6-12), each of which can be used to analyze different samples or replicas of the same sample.
  • Each disc may contain, for example, between 50 and 200 points or "spots" among which are the immobilized receptors (specific, controls, and replicas) to determine exactly each type, factor and / or group of bacteria and / or virus.
  • the suspension of bacteria and / or virus obtained in the previous step is incubated for example 15 minutes, in the disk with the previously immobilized receptors.
  • the receptor fixes the bacteria and / or the virus in a specific and separate position that defines its type, and / or its factor and / or its group.
  • washing and drying can be carried out, for example by washing the disc with water and centrifuging it to dry it quickly.
  • Detection of bacteria and / or viruses on the disk is made with a compact disc reader / writer, which uses the laser of the recorder itself as a questioning beam and the photodiode of the pickup head as the detector element.
  • the specific interaction receptor / bacteria and / or virus produces a precipitate that absorbs and disperses the laser light beam, attenuating the intensity of the reflected signal detected by the pickup head photodiode.
  • the decrease in reflection signal is directly related to the receptor / bacteria and / or virus interaction.
  • the surface of the disc is read or scanned in a few minutes (for example 1-8 min).
  • the brightness and contrast may vary, in order to facilitate the interpretation of the data.
  • the detection can be done visually, using a template that indicates the location of each receptor and a table in which the different combinations of positive signals from the receptors are found, also indicating which type and / or group of bacteria and / or viruses correspond to these signals. With this information, the group and / or type of bacteria and / or viruses are determined exactly based on the signal-to-noise ratio obtained from the simultaneous analysis of, for example, more than one sample.
  • the disk reading comprises two types of data:
  • each area can be made up of different receivers with, for example, 3-6 replicas of each.
  • the bacteria and / or viruses can be stained before or after incubation on the disc by staining techniques described for this purpose (for example Gram + staining for the detection of bacteria), thus increasing the signal to noise ratio.
  • the main field of application of the present invention is epidemiological surveillance, quality control of water and air, and in general any area that involves the detection of bacteria by biospecific interactions based on the use of separate and ordered molecular receptors on a support.
  • the present invention refers to a method for identifying and / or detecting without type the group and / or group of at least one virus and / or a previously isolated bacterium (of at least one sample) and incubated in a solid medium , characterized by understanding the following essential steps:
  • step c) incubate the suspension obtained in step a) on the compact disc obtained in step b),
  • step d) detect the virus and / or bacteria in the compact disc by reading the disc with a compact disc reader / writer as a detector, obtaining a signal to noise ratio; Y e) determine the type and / or group of the virus and / or bacteria based on the signal to noise ratio obtained in step d).
  • the method may comprise the following additional step: f) staining the virus and / or bacteria to amplify the signal to noise ratio obtained in step d), by means of a technique of which They are known in the state of the art.
  • the method described above is characterized in that the sample is selected from the following group: blood (blood culture), pleural fluid, cerebrospinal fluid, saliva, sputum, urine, and tear secretion.
  • the method described above is characterized in that the microarray of step b) is immobilized on the polycarbonate face of the disk while maintaining the optical and mechanical properties of the disk.
  • the method described above is characterized in that the microarray of step b) comprises between 50-200 points comprising at least one receptor of a molecule from the surface of the virus and / or bacteria and at least one point as a control positive. More preferably, the points are at least 0.3-0.5 mm in diameter and are at least 1.0 mm apart.
  • the method described above is characterized in that the compact disc reader / writer defined in step d) uses the laser of the recorder itself as a beam of questioning light and the photodiode of the pickup head as the detector element. More preferably, the laser light beam is absorbed and dispersed by the less a precipitate produced by the specific interaction of the receptor with the virus and / or bacteria, decreasing the intensity of the reflection signal detected by the pickup head photodiode. Even more preferably, the decrease in reflection signal is directly related to the specific interaction of the receptor with the virus and / or bacteria.
  • the method described above is characterized in that the determination of the type and / or group of the virus and / or bacteria defined in step e) is performed visually with a template indicating the location of the recipient and a table in that the different combinations of positive signals of the receptor are found, also indicating to what type and / or group of bacteria and / or viruses these signals correspond.
  • step b) is performed by immobilizing antibodies contained in antisera by disk adsorption. More preferably, immobilization of antibodies contained in antisera by disk adsorption comprises the following steps: i) printing the disc with at least one antiserum solution in the presence of a printing buffer
  • the antiserum solution of step i) contains at least one virus and / or bacterium antibody.
  • the present invention also refers to a method for immobilize at least one receptor of a molecule of the surface of at least one virus and / or a bacterium, characterized by using a compact disc as support, said method comprises the following steps:
  • the present invention also refers to a compact disc characterized by comprising at least one immobilized receptor of a molecule of the surface of at least one virus and / or a bacterium, forming a microarray to be read by a compact disc reader / writer. More preferably, the disk is obtained by a method comprising the following steps:
  • the present invention also refers to the use of the disk defined above, to identify and / or detect without typesetting the type and / or group of at least one virus and / or a bacterium previously isolated from at least one sample and incubated in a solid medium. .
  • said use is characterized in that the identification and / or detection without marking of the type and / or group of at least one virus and / or a bacterium is for epidemiological surveillance.
  • said use is characterized by the identification and / or Detection without mareaje of the type and / or group of at least one virus and / or a bacterium is for quality control of water and / or air.
  • rapid analysis method refers to an assay whose total duration is between 1 and 30 minutes.
  • detection without marking refers to an assay in which the signal produced by the bioreceptor-cell or virus interaction is directly obtained, without resorting to a third species, such as a fluorescent substance, an enzyme or a particle.
  • virus refers to an organism of simple structure, composed of proteins and nucleic acids, and capable of reproducing only within specific living cells, using its metabolism.
  • bacteria refers to single-cell prokaryotic microorganisms, whose various species cause fermentation, disease or rot in living beings or in organic matter.
  • compact disc refers to a digital optical disk-shaped medium, used to store any type of information (audio, images, video, documents and other data) and with different presentations and capabilities in in terms of size and capacity and speed of storage and reproduction.
  • compact disc reader / writer refers to the optical device capable of reproducing and recording the compact discs using a laser that allows it to read the information contained therein and record or re-record information.
  • bioreceptors or receptors refers to more complex molecules or molecular organizations, produced or present in cells, capable of recognizing with great selectivity and affinity to another substance.
  • bioreceptors or receptors refers to more complex molecules or molecular organizations, produced or present in cells, capable of recognizing with great selectivity and affinity to another substance.
  • bioreceptors and receptors to synthetic or semi-synthetic substances with the characteristics described above.
  • biomolecules refers to the minimum unit of a substance of biological origin that retains its chemical properties.
  • microarray refers to a micrometric size matrix.
  • Matrix means a set of numbers, symbols, points, etc., placed in a given arrangement (rectangle, square, circle, ellipse, etc.), often in horizontal and vertical lines.
  • problem sample refers to the sample to be analyzed and which contains the substance or substances to be identified and / or determined.
  • microbial isolates refers to the separation of microorganisms or viruses from the environment where they are originally found.
  • solid medium refers to a medium of culture of microorganisms of firm or solid consistency. They differ from semi-solids (fluid consistency) and liquids.
  • signal to noise ratio refers to the ratio between the intensity of a signal generated in the measurement process of an analyte and the signal of a blank (sample without analyte) or electronic noise.
  • type, factor and group of viruses and / or bacteria refers to:
  • Type each of the large taxonomic groups into which the animal and plant kingdoms are divided, and which, in turn, are subdivided into classes.
  • Fractor antigen present on the cell surface.
  • Group set of microorganisms with genetic, pathogenic, etc. similar characteristics.
  • epidemiological surveillance refers to a system for collecting and evaluating information on medical-epidemiological events.
  • quality control of water and / or air refers to the actions aimed at regulating the quality of air or water within standards.
  • FIGURE 1 Schematic representation of the detector system.
  • the laser guide and disk rotation servomechanisms keep the laser beam focused on the spiral path of the disk, allowing its rotation and scanning.
  • the reflected light is transformed into an electrical analog signal.
  • the photosensor detects the mark (trigger), beginning the acquisition of data.
  • the amplification / detection card (DAB) is integrated in the recorder unit.
  • the DAQ card digitizes the analog signals from the DAB and transfers them to the computer for processing.
  • the CD player-recorder is controlled by software (BioDisk) and connected to the computer through a USB2.0 interface.
  • FIGURE 2 Images obtained after reading the disc when analyzing serotypes of Strepcococcus pneumoniae in microbial isolates. Panel I corresponds to the result of identification without marking and panel II to the response obtained after the staining process.
  • FIGURE 3 Images obtained after reading the disc when analyzing sermon extracts of Salmonella spp. Panel l-V: S. Malmoe 16263.1; S. Typhimurium 15994.3; S. Llandoff; negative control
  • FIGURE 4 Images obtained after reading the disc when analyzing extracts of E. coli serotypes.
  • Panel l-IV E. coli 0157: H7; E. coli O103: H2; E. coli 026: H1 1; negative control
  • Immobilization of antibodies contained in antisera in microarray format by disk adsorption is preferably performed by adsorption, without being limiting to the invention.
  • the anchoring of the bacteria to the receptor occurs through the formation of hydrogen bonds, van der Valls forces, hydrophobic bonds between the receptor and the surface.
  • the receptors react with the surface of the bacteria in buffered aqueous solutions, their pH being a critical variable to obtain a stable immobilization of the antisera.
  • micromatrices of 144 dots each (12 12) are printed on the polycarbonate side of a DVD disc.
  • Each matrix contains 0.3-0.5 mm diameter points 1.0 mm apart, dispensing antiserum solutions (20-50 nl_), containing specific receptors or bioreceptors to detect and identify five serotypes at the type, factor level and partial group and points used as positive control.
  • the printing buffer is an aqueous 0.1 M carbonate / bicarbonate solution, pH 9.5. After printing, the disc is allowed to incubate at 4 ° C. After 16 hours the disc is washed with water and dried by centrifugation. Thus, the six antisera are printed at four different dilutions with six replicates each.
  • Detection is done by scanning the disc with a disc reader / writer.
  • the appearance of points in the image obtained on the computer identifies the type, factor and group of bacteria present in the sample.
  • the bacteria can be stained before or after incubation on the disc by staining techniques described for this (Gram + staining), thereby increasing the signal to noise ratio.
  • each antiserum immobilized on the disc recognizes the type or group of bacteria unique and specifically with a signal to noise ratio between 51 (s1 1 C) and 152 (s12). The positive control is detected for all strains except s1.
  • EXAMPLE 2 Identification of Salmonella spp.
  • Figure 4 shows the images obtained after reading the disc when analyzing extracts of pure colony. As can be seen in all cases, positive responses were obtained for the control block (matrix on the left). On the other hand, positive results (right matrix) were obtained in the block with specific antibodies for each E. coli serotype (l-lll panels), the results being negative for the control (panel IV).

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Abstract

The invention relates to a rapid analysis method for the label-free identification and detection of Gram + and Gram - bacteria and/or viruses that may or may not be antibiotic resistant, using audio-video discs (CD, DVD, BD, Lightscribe, Superdisk, etc.) as a support for immobilising specific molecular receptors of biomolecules present on the surface of the bacteria and/or viruses, using a disc player/recorder (CD, DVD, BD, Lightscribe, etc.) as a detector. The invention comprises three main processes: resuspension of the viruses and/or bacteria, incubation on the disc, and label-free detection using a compact disc player/recorder (CD, DVD, BD, etc.). The invention has been designed to identify receptors or bioreceptors immobilised separately on the polycarbonate face of the disc in known ordered positions, forming a micro-array. The specific bioreceptors of biomolecules present on the surface the viruses and/or bacteria can be, for example, proteins, lipids and nucleic acids.

Description

MÉTODO PARA IDENTIFICACIÓN DE BACTERIAS Y VIRUS SIN MARCAJE BASADO EN TECNOLOGÍA DE DISCO COMPACTO  METHOD FOR IDENTIFICATION OF BACTERIA AND VIRUSES WITHOUT MARKING BASED ON COMPACT DISC TECHNOLOGY
DESCRIPCIÓN DESCRIPTION
SECTOR DE LA TÉCNICA SECTOR OF THE TECHNIQUE
La presente invención se centra en el sector de la biotecnología, en concreto en el análisis para la identificación y detección de bacterias y/o virus sin mareaje. Las principales aplicaciones de la invención ocurren en la vigilancia epidemiológica, control de calidad de agua y aire, y en general cualquier área que implique la detección de bacterias mediante interacciones bioespecíficas basadas en la utilización de receptores moleculares separados y ordenados sobre un soporte. The present invention focuses on the biotechnology sector, specifically in the analysis for the identification and detection of bacteria and / or viruses without marking. The main applications of the invention occur in epidemiological surveillance, quality control of water and air, and in general any area that involves the detection of bacteria by biospecific interactions based on the use of separate and ordered molecular receptors on a support.
ESTADO DE LA TÉCNICA ANTERIOR STATE OF THE PREVIOUS TECHNIQUE
La tecnología de detección y/o identificación de bacterias y virus utilizando discos ópticos como soportes, y lectores/grabadores de discos como detectores es conocida en el estado de la técnica. The technology of detection and / or identification of bacteria and viruses using optical discs as supports, and disc readers / recorders as detectors is known in the state of the art.
ES2288429B2 (Universidad Politécnica de Valencia, 2006) describe un método de modificación química de un disco compacto, destinado como soporte para la inmovilización covalente de biomoléculas, manteniendo al máximo las propiedades ópticas y mecánicas del disco compacto. La inmovilización covalente de las biomoléculas se realiza en un orden y disposición establecidos constituyendo un array o microarray sobre la superficie polimérica del disco compacto. Los enlaces covalentes del método descrito en ES2288429B2, en la mayoría de los casos son irreversibles. El enlace covalente es más perdurable en el tiempo comparado con las interacciones electrostáticas así como las interacciones hidrófilas/hidrófobas, permitiendo que el tipo de unión de las biomoléculas a la superficie polimérica sea más fuerte para resistir mejor los lavados. Las biomoléculas se encuentran marcadas para su detección directa o indirecta mediante la conjugación con un fluorocromo o con una enzima. ES2288429B2 (Polytechnic University of Valencia, 2006) describes a method of chemical modification of a compact disk, intended as a support for the covalent immobilization of biomolecules, while maintaining the optical and mechanical properties of the compact disk. The covalent immobilization of the biomolecules is carried out in an established order and arrangement constituting an array or microarray on the polymer surface of the compact disk. The covalent bonds of the method described in ES2288429B2, in most cases are irreversible. The covalent bond is more durable over time compared to electrostatic interactions as well as hydrophilic / hydrophobic interactions, allowing the type of binding of biomolecules to the polymeric surface to be stronger to resist Better the washes. Biomolecules are labeled for direct or indirect detection by conjugation with a fluorochrome or with an enzyme.
EP1324042A2 (José Reclame, 2001 ) describe un método para la detección y/o cuantificación de moléculas ancladas a moléculas de captura que se encuentran fijadas en la superficie de un disco compacto mediante costosos y complicados medios. El método descrito permite realizar lecturas y/o detecciones biológicas en una cara del disco mientras que en la otra se pueden efectuar lecturas o grabaciones de las señales de fluorescencia obtenidas. EP1324042A2 (José Reclame, 2001) describes a method for the detection and / or quantification of molecules anchored to capture molecules that are fixed on the surface of a compact disk by expensive and complicated means. The described method allows readings and / or biological detections to be made on one side of the disk, while on the other side, readings or recordings of the obtained fluorescence signals can be made.
ES2304093A1 (Universidad Politécnica de Valencia, 2006) describe un sistema integrado de almacenamiento de datos para análisis químico de muestras y para detección y almacenamiento de los resultados analíticos. El sistema descrito es capaz de capturar los resultados analíticos obtenidos en una cara de un disco de almacenamiento de datos y obtener su transposición en datos digitales para su posterior procesamiento y/o grabado en la otra cara del disco. El sistema comprende un disco compacto (CD/DVD) como soporte así como un lector/grabador de CD/DVD para la detección de las señales de fluorescencia. ES2304093A1 (Polytechnic University of Valencia, 2006) describes an integrated data storage system for chemical analysis of samples and for detection and storage of analytical results. The described system is capable of capturing the analytical results obtained on one side of a data storage disk and obtaining its transposition into digital data for further processing and / or recording on the other side of the disk. The system comprises a compact disc (CD / DVD) as a support as well as a CD / DVD reader / writer for the detection of fluorescence signals.
Existe un creciente interés por los métodos de caracterización de moléculas mediante técnicas sin mareaje (label-free). Habitualmente el proceso de detección o reconocimiento de moléculas se realiza mediante técnicas que requieren elementos de marcado tales como colorantes fluorescentes, enzimas, isótopos radioactivos, etc. Sin embargo, los protocolos asociados al proceso de mareaje de estas moléculas para su detección implican mayor tiempo y mayor coste económico. Por ello se espera que los sistemas de detección e identificación de moléculas sin marcado crezcan en importancia en sectores como el clínico, biofarmacéutico, medioambiental, seguridad, entre otros debido a su sencillez, sensibilidad, ahorro de reactivos y analitos, y en definitiva, menor coste por detección. There is a growing interest in the methods of characterization of molecules through techniques without labeling. Usually the process of detection or recognition of molecules is carried out by techniques that require labeling elements such as fluorescent dyes, enzymes, radioactive isotopes, etc. However, the protocols associated with the process of mareaje of these molecules for their detection imply greater time and greater economic cost. Therefore, it is expected that detection and identification systems of unlabeled molecules will grow in importance in sectors such as clinical, biopharmaceutical, environmental, security, among others due to its simplicity, sensitivity, saving of reagents and analytes, and ultimately, lower cost per detection.
US2007/0026382A1 (ALIX YALE & RISTAS LLP, 2006) describe un método alternativo a la citometría de flujo para detección de fenotipos y determinación de respuestas funcionales en las células, basado en una tecnología sin mareaje, sobre una superficie biosensible, que puede ser un chip o una placa (biosensor chip), de manera preferente recubierta de oro. La superficie biosensible descrita comprende un array de ligandos de captura específica para marcadores de la superficie celular de manera que un fenotipo específico se correlaciona con una localización de interacción específica sobre el chip. El tipo de células que se puede analizar incluye células animales, vegetales y bacterias. La lectura de la interacción entre las células y los ligandos de captura específica se realiza mediante una cámara CCD o una cámara CMOS. US2007 / 0026382A1 (ALIX YALE & RISTAS LLP, 2006) describes an alternative method to flow cytometry for detection of phenotypes and determination of functional responses in cells, based on a technology without dizziness, on a biosensitive surface, which can be a chip or a plate (biosensor chip), preferably coated with gold. The biosensitive surface described comprises an array of specific capture ligands for cell surface markers so that a specific phenotype correlates with a specific interaction location on the chip. The type of cells that can be analyzed includes animal, plant and bacterial cells. The interaction between the cells and the specific capture ligands is read by a CCD camera or a CMOS camera.
A pesar de los diferentes procedimientos descritos en el estado de la técnica, actualmente existe la necesidad de desarrollar un método de análisis rápido sin mareaje para la identificación y detección de bacterias y virus, basado en tecnologías de disco compacto. Despite the different procedures described in the state of the art, there is currently a need to develop a rapid analysis method without marking for the identification and detection of bacteria and viruses, based on compact disk technologies.
BREVE DESCRIPCIÓN DE LA INVENCIÓN BRIEF DESCRIPTION OF THE INVENTION
La presente invención comprende una metodología de análisis rápido para la identificación y detección sin mareaje de virus y bacterias Gram + y Gram -, resistentes o no a antibióticos, utilizando como soporte discos audio-video (CD, DVD, BD, Lightscribe, Superdisk, etc.) donde inmovilizar receptores moleculares específicos de biomoléculas presentes en la superficie de las bacterias y/o virus, empleando como detector un lector/grabador de discos (CD, DVD, BD, Lightscribe, etc.). La presente invención ha sido diseñada para identificar receptores o bioreceptores inmovilizados separados en la cara de policarbonato del disco y en posiciones conocidas y ordenadas, formando una micromatriz. Los bioreceptores específicos de biomoléculas presentes en la superficie de virus y/o bacterias pueden ser por ejemplo polisacáridos, proteínas, lípidos y ácidos nucleicos. The present invention comprises a rapid analysis methodology for the identification and detection without detection of Gram + and Gram - viruses and bacteria, resistant or not to antibiotics, using as audio-video discs (CD, DVD, BD, Lightscribe, Superdisk, etc.) where to immobilize specific molecular receptors of biomolecules present on the surface of bacteria and / or viruses, using as a detector a disk reader / writer (CD, DVD, BD, Lightscribe, etc.). The present invention has been designed to identify separate immobilized receptors or bioreceptors on the polycarbonate face of the disk and in known and orderly positions, forming a microarray. The Specific bioreceptors of biomolecules present on the surface of viruses and / or bacteria may be for example polysaccharides, proteins, lipids and nucleic acids.
Como realización preferente, la presente invención se ha aplicado en la identificación y detección sin mareaje de una suspensión de neumococos (Strepcococcus pneumoniae) previamente aislada de una muestra clínica y crecida en medio sólidos, así como de una suspensión de Escherichia coli y de Salmonella spp. Para ello, la invención se ha diseñado para identificar polisacáridos específicos presentes en la superficie de dichas bacterias, utilizando microarrays de antisueros. As a preferred embodiment, the present invention has been applied in the identification and detection of a pneumococcal suspension (Strepcococcus pneumoniae) previously isolated from a clinical sample and grown in solid media, as well as a suspension of Escherichia coli and Salmonella spp. . To this end, the invention has been designed to identify specific polysaccharides present on the surface of said bacteria, using antiserum microarrays.
DESCRIPCIÓN DETALLADA DE LA INVENCIÓN DETAILED DESCRIPTION OF THE INVENTION
De manera general, el método de identificación y/o detección de virus y/o bacterias objeto de la presente invención comprende las siguientes etapas esenciales: In general, the method of identification and / or detection of viruses and / or bacteria object of the present invention comprises the following essential steps:
- resuspensión de las bacterias y/o los virus contenidos en la muestra problema, - resuspension of bacteria and / or viruses contained in the test sample,
- incubación en disco compacto, y  - incubation on compact disk, and
- detección sin mareaje empleando un lector/grabador de discos.  - detection without mareaje using a disc reader / writer.
Resuspensión de las bacterias y/o los virus contenidos en la muestra problema Resuspension of bacteria and / or viruses contained in the test sample
Se parte de una muestra problema (a partir de ahora "muestra") ya obtenida, por ejemplo una muestra clínica, recogida por ejemplo en una placa tipo Petri y previamente incubada en un medio sólido (por ejemplo en agar-sangre, agar chocolate, etc.), durante un tiempo suficiente para que las bacterias y/o los virus allí contenidos crezcan en abundancia (10^-10^) sobre la superficie de la placa (por ejemplo 16-24 h), hasta formar colonias. It is based on a test sample (from now on "sample") already obtained, for example a clinical sample, collected for example in a Petri dish and previously incubated in a solid medium (for example in blood agar, chocolate agar, etc.), for a sufficient time for the bacteria and / or viruses contained therein to grow abundantly (10 ^ -10 ^) on the surface of the plate (for example 16-24 h), until forming colonies.
Las muestras a analizar con la invención pueden ser aislamientos microbianos de origen diverso como sangre (hemocultivo), líquido pleural, líquido cefalorraquídeo, saliva, esputo, orina, secreción lacrimal, etc. The samples to be analyzed with the invention can be microbial isolates of diverse origin such as blood (blood culture), pleural fluid, cerebrospinal fluid, saliva, sputum, urine, tear secretion, etc.
La resuspensión del material de las colonias de bacterias y/o virus de la muestra se realiza por ejemplo mediante un asa de siembra de 1 [iL que se pasa por la superficie del medio sólido, para añadirse por ejemplo a un tubo de 1 ,5 mL que contiene un volumen adecuado (por ejemplo entre 100-500 μί) de una disolución acuosa tamponada (por ejemplo PBST, TBS-T, etc.) la cual se caracteriza por ser compatible con la suspensión de bacterias y/o virus para su posterior incubación en el disco. Resuspension of the material from the bacteria and / or virus colonies in the sample is carried out, for example, by a 1 [iL planting handle that passes through the surface of the solid medium, to be added, for example, to a 1, 5 tube mL containing an adequate volume (for example between 100-500 μί) of a buffered aqueous solution (for example PBST, TBS-T, etc.) which is characterized by being compatible with the suspension of bacteria and / or viruses for its subsequent incubation on the disk.
Se obtiene una suspensión de bacterias y/o virus que preferiblemente se homogeneiza antes del siguiente paso para eliminar posibles agregados y así facilitar las interacciones con los receptores inmovilizados en la superficie del disco compacto. A suspension of bacteria and / or viruses is obtained which is preferably homogenized before the next step to eliminate possible aggregates and thus facilitate interactions with the immobilized receptors on the surface of the compact disc.
Incubación en el disco compacto Incubation on the compact disc
Se parte de un disco compacto (de ahora en adelante "disco") en cuya cara de policarbonato se han inmovilizado receptores moleculares localizados en la superficie de las bacterias y/o virus, quedando dispuestos en posiciones conocidas y ordenadas, formando una micromatriz. Estos receptores permiten identificar biomoléculas de la superficie del virus y/o la bacteria, tales como proteínas, lípidos, ácidos nucleicos, o polisacáridos. It starts from a compact disk (hereinafter "disk") on whose face of polycarbonate molecular receptors located on the surface of bacteria and / or viruses have been immobilized, being arranged in known and orderly positions, forming a microarray. These receptors make it possible to identify biomolecules from the surface of the virus and / or the bacteria, such as proteins, lipids, nucleic acids, or polysaccharides.
A este paso se lo denomina impresión de micromatrices sobre el disco. La inmovilización de los receptores en el disco se puede realizar mediante diferentes métodos (Hermanson, G.T. Bioconjugate Techniques. 2*n Edition. Academic Press, San Diego, CA. 2008), de manera preferente pero no limitante, en una realización preferente de la presente invención se realiza mediante la inmovilización de anticuerpos contenidos en antisueros mediante adsorción en disco, tal y como se describe más adelante. This step is called microarray printing on the disc. The immobilization of the receptors on the disc can be performed by different methods (Hermanson, GT Bioconjugate Techniques. 2 * n Edition Academic Press, San Diego, CA. 2008), preferably but not limitingly, in a preferred embodiment of the present invention is carried out by immobilizing antibodies contained in antisera by disk adsorption, as described below.
Independientemente del método de inmovilización empleado, la superficie del disco con los receptores inmovilizados debe mantener las propiedades ópticas y mecánicas del disco, aspecto clave para su lectura mediante el lector/grabador de discos del siguiente paso. Regardless of the immobilization method used, the surface of the disk with the immobilized receivers must maintain the optical and mechanical properties of the disk, a key aspect for its reading by the disk reader / writer of the next step.
El disco está segmentado en áreas independientes (por ejemplo entre 6-12), cada una de las cuales se puede utilizar para analizar muestras distintas o réplicas de una misma muestra. Cada disco puede contener impresos por ejemplo entre 50 y 200 puntos o "spots" entre los que se encuentran los receptores inmovilizados (específicos, controles, y réplicas) para determinar con exactitud cada uno de los tipo, factor y/o grupo de bacterias y/o virus. La suspensión de bacterias y/o virus obtenida en el paso anterior se incuba durante por ejemplo 15 minutos, en el disco con los receptores previamente inmovilizados. The disk is segmented into independent areas (for example between 6-12), each of which can be used to analyze different samples or replicas of the same sample. Each disc may contain, for example, between 50 and 200 points or "spots" among which are the immobilized receptors (specific, controls, and replicas) to determine exactly each type, factor and / or group of bacteria and / or virus. The suspension of bacteria and / or virus obtained in the previous step is incubated for example 15 minutes, in the disk with the previously immobilized receptors.
Durante la incubación, el receptor fija la bacteria y/o el virus en una posición concreta y separada que define su tipo, y/o su factor y/o su grupo. During the incubation, the receptor fixes the bacteria and / or the virus in a specific and separate position that defines its type, and / or its factor and / or its group.
Para eliminar las bacterias y/o los virus que no se han fijado específicamente en el disco, se puede realizar un lavado y un secado, por ejemplo lavando el disco con agua y centrifugándolo para secarlo rápidamente. To remove bacteria and / or viruses that have not been specifically fixed on the disc, washing and drying can be carried out, for example by washing the disc with water and centrifuging it to dry it quickly.
Detección de bacterias y/o virus en el disco Por último, se realiza una lectura del disco con un lector/grabador de discos compactos, que utiliza el láser del propio grabador como haz interrogante y el fotodiodo propio del cabezal pickup como elemento detector. Detection of bacteria and / or viruses on the disk Finally, a reading of the disk is made with a compact disc reader / writer, which uses the laser of the recorder itself as a questioning beam and the photodiode of the pickup head as the detector element.
La interacción específica receptor/bacteria y/o virus produce un precipitado que absorbe y dispersa el haz de luz del láser, atenuando la intensidad de señal reflejada que detecta el fotodiodo del cabezal pickup. La disminución de señal de reflexión se relaciona directamente con la interacción receptor/bacteria y/o virus. Dependiendo del tipo de disco, velocidad de lectura, y posición de la matriz, la superficie del disco se lee o escanea en pocos minutos (por ejemplo 1 -8 min).  The specific interaction receptor / bacteria and / or virus produces a precipitate that absorbs and disperses the laser light beam, attenuating the intensity of the reflected signal detected by the pickup head photodiode. The decrease in reflection signal is directly related to the receptor / bacteria and / or virus interaction. Depending on the type of disc, reading speed, and position of the matrix, the surface of the disc is read or scanned in a few minutes (for example 1-8 min).
Una vez finalizado el escaneado del disco, se observa la imagen obtenida en la pantalla del ordenador, pudiendo variar el brillo y el contraste, con el fin de facilitar la interpretación de los datos. La detección se puede hacer visualmente, ayudándose de una plantilla que indica la localización de cada receptor y de una tabla en la que se encuentran las diferentes combinaciones de señales positivas de los receptores, indicándose también a qué tipo y/o grupo de bacteria y/o virus corresponden dichas señales. Con esta información se determina exactamente el grupo y/o tipo de bacteria y/o virus en función de la relación señal ruido obtenida de los análisis simultáneos de por ejemplo más de una muestra. Once the disc scan is finished, the image obtained on the computer screen is observed, the brightness and contrast may vary, in order to facilitate the interpretation of the data. The detection can be done visually, using a template that indicates the location of each receptor and a table in which the different combinations of positive signals from the receptors are found, also indicating which type and / or group of bacteria and / or viruses correspond to these signals. With this information, the group and / or type of bacteria and / or viruses are determined exactly based on the signal-to-noise ratio obtained from the simultaneous analysis of, for example, more than one sample.
La lectura del disco comprende dos tipos de datos: The disk reading comprises two types of data:
1 . Datos obtenidos de los puntos o spots de control positivo que sirven para fijar la plantilla de interpretación. Se trata de puntos con receptores impresos directamente en el disco que dan señal positiva. one . Data obtained from the points or spots of positive control used to set the interpretation template. These are points with receivers printed directly on the disc that give a positive signal.
2. Datos obtenidos a partir de los puntos o spots impresos dentro de un área determinada donde se han inmovilizado receptores que unen la bacteria y/o el virus, y que como consecuencia absorben y dispersan la luz del láser, atenuando la señal de reflexión detectada por el cabezal pickup. En este patrón, cada área puede estar formada por receptores diferentes con, por ejemplo, 3-6 réplicas de cada uno. 2. Data obtained from the points or spots printed within a certain area where receptors that bind the bacteria and / or the virus have been immobilized, and that consequently absorb and disperse the laser light, attenuating the reflection signal detected by the pickup head. In this pattern, each area can be made up of different receivers with, for example, 3-6 replicas of each.
Alternativamente, las bacterias y/o virus pueden teñirse previa o posteriormente a la incubación en el disco mediante técnicas de tinción descritas para ello (por ejemplo tinción Gram + para la detección de bacterias), aumentando así la relación señal ruido. Alternatively, the bacteria and / or viruses can be stained before or after incubation on the disc by staining techniques described for this purpose (for example Gram + staining for the detection of bacteria), thus increasing the signal to noise ratio.
El principal campo de aplicación de la presente invención es la vigilancia epidemiológica, control de calidad de agua y aire, y en general cualquier área que implique la detección de bacterias mediante interacciones bioespecíficas basadas en la utilización de receptores moleculares separados y ordenados sobre un soporte. The main field of application of the present invention is epidemiological surveillance, quality control of water and air, and in general any area that involves the detection of bacteria by biospecific interactions based on the use of separate and ordered molecular receptors on a support.
Por tanto, la presente invención hace referencia a un método para identificar y/o detectar sin mareaje el tipo y/o grupo de al menos un virus y/o una bacteria previamente aislada (de al menos una muestra) e incubada en un medio sólido, caracterizado por comprender los siguientes pasos esenciales: Therefore, the present invention refers to a method for identifying and / or detecting without type the group and / or group of at least one virus and / or a previously isolated bacterium (of at least one sample) and incubated in a solid medium , characterized by understanding the following essential steps:
a) resuspender el virus y/o bacteria en una disolución acuosa tamponada, obteniendo una suspensión del virus y/o bacteria;  a) resuspend the virus and / or bacteria in a buffered aqueous solution, obtaining a suspension of the virus and / or bacteria;
b) inmovilizar al menos un receptor de una molécula de la superficie del virus y/o bacteria, formando una micromatriz en un disco compacto como soporte;  b) immobilize at least one receptor of a molecule from the surface of the virus and / or bacteria, forming a microarray on a compact disk as a support;
c) incubar la suspensión obtenida en el paso a) en el disco compacto obtenido en el paso b),  c) incubate the suspension obtained in step a) on the compact disc obtained in step b),
d) detectar el virus y/o bacteria en el disco compacto mediante la lectura del disco con un lector/grabador de discos compactos como detector, obteniendo una relación señal ruido; y e) determinar el tipo y/o grupo del virus y/o bacteria en función de la relación señal ruido obtenida en el paso d). d) detect the virus and / or bacteria in the compact disc by reading the disc with a compact disc reader / writer as a detector, obtaining a signal to noise ratio; Y e) determine the type and / or group of the virus and / or bacteria based on the signal to noise ratio obtained in step d).
De manera preferente, antes o después del paso c) definido anteriormente el método puede comprender el siguiente paso adicional: f) teñir el virus y/o bacteria para amplificar la relación señal ruido obtenida en el paso d), mediante una técnica de las que se conocen en el estado de la técnica. Preferably, before or after step c) defined above, the method may comprise the following additional step: f) staining the virus and / or bacteria to amplify the signal to noise ratio obtained in step d), by means of a technique of which They are known in the state of the art.
Así mismo, en una realización preferente, el método descrito anteriormente se caracteriza por que la muestra se selecciona de entre el siguiente grupo: sangre (hemocultivo), líquido pleural, líquido cefalorraquídeo, saliva, esputo, orina, y secreción lacrimal. Likewise, in a preferred embodiment, the method described above is characterized in that the sample is selected from the following group: blood (blood culture), pleural fluid, cerebrospinal fluid, saliva, sputum, urine, and tear secretion.
En otra realización preferente, el método descrito anteriormente se caracteriza por que la micromatriz del paso b) se inmoviliza en la cara de policarbonato del disco manteniendo las propiedades ópticas y mecánicas del disco. In another preferred embodiment, the method described above is characterized in that the microarray of step b) is immobilized on the polycarbonate face of the disk while maintaining the optical and mechanical properties of the disk.
En otra realización preferente, el método descrito anteriormente se caracteriza por que la micromatriz del paso b) comprende entre 50 - 200 puntos que comprenden al menos un receptor de una molécula de la superficie del virus y/o bacteria y al menos un punto como control positivo. Más preferentemente, los puntos tienen al menos entre 0,3-0,5 mm de diámetro y están separados al menos 1 ,0 mm. In another preferred embodiment, the method described above is characterized in that the microarray of step b) comprises between 50-200 points comprising at least one receptor of a molecule from the surface of the virus and / or bacteria and at least one point as a control positive. More preferably, the points are at least 0.3-0.5 mm in diameter and are at least 1.0 mm apart.
En otra realización preferente, el método descrito anteriormente se caracteriza por que el lector/grabador de discos compactos definido en el paso d) utiliza el láser del propio grabador como haz de luz interrogante y el fotodiodo propio del cabezal pickup como elemento detector. Más preferentemente, el haz de luz del láser es absorbido y dispersado por al menos un precipitado producido por la interacción específica del receptor con el virus y/o bacteria, disminuyendo la intensidad de la señal de reflexión que detecta el fotodiodo del cabezal pickup. Aún más preferentemente, la disminución de señal de reflexión se relaciona directamente con la interacción específica del receptor con el virus y/o bacteria. In another preferred embodiment, the method described above is characterized in that the compact disc reader / writer defined in step d) uses the laser of the recorder itself as a beam of questioning light and the photodiode of the pickup head as the detector element. More preferably, the laser light beam is absorbed and dispersed by the less a precipitate produced by the specific interaction of the receptor with the virus and / or bacteria, decreasing the intensity of the reflection signal detected by the pickup head photodiode. Even more preferably, the decrease in reflection signal is directly related to the specific interaction of the receptor with the virus and / or bacteria.
En otra realización preferente, el método descrito anteriormente se caracteriza por que la determinación del tipo y/o grupo del virus y/o bacteria definida en el paso e) se realiza visualmente con una plantilla que indica la localización del receptor y de una tabla en la que se encuentran las diferentes combinaciones de señales positivas del receptor, indicándose también a qué tipo y/o grupo de bacteria y/o virus corresponden dichas señales. In another preferred embodiment, the method described above is characterized in that the determination of the type and / or group of the virus and / or bacteria defined in step e) is performed visually with a template indicating the location of the recipient and a table in that the different combinations of positive signals of the receptor are found, also indicating to what type and / or group of bacteria and / or viruses these signals correspond.
En otra realización preferente, el método descrito anteriormente se caracteriza por que el paso b) se realiza mediante la inmovilización de anticuerpos contenidos en antisueros mediante adsorción en disco. Más preferentemente, la inmovilización de anticuerpos contenidos en antisueros mediante adsorción en disco comprende los siguientes pasos: i) imprimir el disco con al menos una disolución de antisuero en presencia de un tampón de impresión In another preferred embodiment, the method described above is characterized in that step b) is performed by immobilizing antibodies contained in antisera by disk adsorption. More preferably, immobilization of antibodies contained in antisera by disk adsorption comprises the following steps: i) printing the disc with at least one antiserum solution in the presence of a printing buffer
(como por ejemplo una disolución acuosa de carbonato/bicarbonato 0,1 M, pH 9,5),  (such as an aqueous 0.1 M carbonate / bicarbonate solution, pH 9.5),
ii) incubar al menos a 4 °C durante un periodo de  ii) incubate at least 4 ° C for a period of
tiempo de al menos 16 horas,  time of at least 16 hours,
iii) lavar con agua y secar el disco por  iii) wash with water and dry the disc by
centrifugación.  centrifugation
Aún más preferentemente, la disolución de antisuero del paso i) contiene al menos un anticuerpo del virus y/o bacteria. Even more preferably, the antiserum solution of step i) contains at least one virus and / or bacterium antibody.
La presente invención también hace referencia a un método para inmovilizar al menos un receptor de una molécula de la superficie de al menos un virus y/o una bacteria, caracterizado por emplear como soporte un disco compacto, dicho método comprende los siguientes pasos: The present invention also refers to a method for immobilize at least one receptor of a molecule of the surface of at least one virus and / or a bacterium, characterized by using a compact disc as support, said method comprises the following steps:
i) imprimir la cara de policarbonato del disco con al menos una disolución de antisuero en presencia de un tampón de impresión, ii) incubar al menos a 4 °C durante un periodo de  i) print the polycarbonate side of the disc with at least one antiserum solution in the presence of a printing buffer, ii) incubate at least 4 ° C for a period of
tiempo de al menos 16 horas, y  time of at least 16 hours, and
iii) lavar con agua y secar el disco por centrifugación,  iii) wash with water and dry the disc by centrifugation,
donde se mantienen las propiedades ópticas y mecánicas del disco.  where the optical and mechanical properties of the disk are maintained.
La presente invención también hace referencia a un disco compacto caracterizado por comprender al menos un receptor inmovilizado de una molécula de la superficie de al menos un virus y/o una bacteria, formando una micromatriz para ser leído por un lector/grabador de discos compactos. Más preferentemente, el disco se obtiene mediante un método que comprende los siguientes pasos: The present invention also refers to a compact disc characterized by comprising at least one immobilized receptor of a molecule of the surface of at least one virus and / or a bacterium, forming a microarray to be read by a compact disc reader / writer. More preferably, the disk is obtained by a method comprising the following steps:
i) imprimir la cara de policarbonato del disco con al menos una disolución de antisuero en presencia de un tampón de impresión, ii) incubar al menos a 4 °C durante un periodo de  i) print the polycarbonate side of the disc with at least one antiserum solution in the presence of a printing buffer, ii) incubate at least 4 ° C for a period of
tiempo de al menos 16 horas, y  time of at least 16 hours, and
iii) lavar con agua y secar el disco por centrifugación,  iii) wash with water and dry the disc by centrifugation,
donde se mantienen las propiedades ópticas y mecánicas del disco.  where the optical and mechanical properties of the disk are maintained.
La presente invención también hace referencia al uso del disco definido anteriormente, para identificar y/o detectar sin mareaje el tipo y/o grupo de al menos un virus y/o una bacteria previamente aislada de al menos una muestra e incubada en un medio sólido. The present invention also refers to the use of the disk defined above, to identify and / or detect without typesetting the type and / or group of at least one virus and / or a bacterium previously isolated from at least one sample and incubated in a solid medium. .
Más preferentemente, dicho uso se caracteriza por que la identificación y/o detección sin mareaje del tipo y/o grupo de al menos un virus y/o una bacteria es para vigilancia epidemiológica. More preferably, said use is characterized in that the identification and / or detection without marking of the type and / or group of at least one virus and / or a bacterium is for epidemiological surveillance.
Alternativamente, dicho uso se caracteriza por que la identificación y/o detección sin mareaje del tipo y/o grupo de al menos un virus y/o una bacteria es para control de calidad de agua y/o aire. Alternatively, said use is characterized by the identification and / or Detection without mareaje of the type and / or group of at least one virus and / or a bacterium is for quality control of water and / or air.
Para facilitar la comprensión de la presente invención, a continuación se expone el significado de algunos términos y expresiones tal y como aquí se utilizan. To facilitate the understanding of the present invention, the meaning of some terms and expressions as used herein is set forth below.
En la presente invención el término: "método de análisis rápido", se refiere a un ensayo cuya duración total está comprendida entre 1 y 30 minutos. In the present invention the term: "rapid analysis method" refers to an assay whose total duration is between 1 and 30 minutes.
En la presente invención el término: "detección sin mareaje", se refiere a un ensayo en el que directamente se obtiene la señal producida por la interacción bioreceptor-célula o virus, sin recurrir a un tercera especie, como por ejemplo una sustancia fluorescente, una enzima o una partícula. In the present invention the term: "detection without marking" refers to an assay in which the signal produced by the bioreceptor-cell or virus interaction is directly obtained, without resorting to a third species, such as a fluorescent substance, an enzyme or a particle.
En la presente invención el término: "virus", se refiere a un organismo de estructura sencilla, compuesto de proteínas y ácidos nucleicos, y capaz de reproducirse solo en el seno de células vivas específicas, utilizando su metabolismo. In the present invention the term: "virus" refers to an organism of simple structure, composed of proteins and nucleic acids, and capable of reproducing only within specific living cells, using its metabolism.
En la presente invención el término: "bacterias", se refiere a microorganismos unicelulares procariontes, cuyas diversas especies causan las fermentaciones, enfermedades o putrefacción en los seres vivos o en las materias orgánicas. In the present invention the term: "bacteria" refers to single-cell prokaryotic microorganisms, whose various species cause fermentation, disease or rot in living beings or in organic matter.
En la presente invención el término: "disco compacto", se refiere a un soporte digital óptico con forma de disco, utilizado para almacenar cualquier tipo de información (audio, imágenes, vídeo, documentos y otros datos) y con diferentes presentaciones y capacidades en cuanto a tamaño y capacidad y velocidad de almacenamiento y reproducción. En la presente invención el término: "lector/grabador de disco compacto", se refiere al dispositivo óptico capaz de reproducir y o grabar los discos compactos utilizando un láser que le permite leer la información contenida en ellos y grabar o regrabar información. In the present invention the term: "compact disc" refers to a digital optical disk-shaped medium, used to store any type of information (audio, images, video, documents and other data) and with different presentations and capabilities in in terms of size and capacity and speed of storage and reproduction. In the present invention the term: "compact disc reader / writer" refers to the optical device capable of reproducing and recording the compact discs using a laser that allows it to read the information contained therein and record or re-record information.
En la presente invención el término: "bioreceptores o receptores", se refiere a moléculas u organizaciones moleculares más complejas, producidas o presentes en las células, capaces de reconocer con gran selectividad y afinidad a otra sustancia. Por ejemplo: anticuerpos, oligonucleotidos, lectinas, lipocalinas, etc. In the present invention the term: "bioreceptors or receptors" refers to more complex molecules or molecular organizations, produced or present in cells, capable of recognizing with great selectivity and affinity to another substance. For example: antibodies, oligonucleotides, lectins, lipocalins, etc.
También se entiende como bioreceptores y receptores a sustancias sintéticas o semisintéticas con las características descritas arriba.  It is also understood as bioreceptors and receptors to synthetic or semi-synthetic substances with the characteristics described above.
En la presente invención el término: "biomoléculas", se refiere a la unidad mínima de una sustancia de origen biológico que conserva sus propiedades químicas. In the present invention the term: "biomolecules" refers to the minimum unit of a substance of biological origin that retains its chemical properties.
En la presente invención el término: "micromatriz", se refiere a matriz de tamaño micrométrico. Se entiende por matriz a un conjunto de números, símbolos, puntos, etc., colocados en una disposición dada (rectángulo, cuadrado, circulo, elipse, etc.), frecuentemente en líneas horizontales y verticales. In the present invention the term: "microarray" refers to a micrometric size matrix. Matrix means a set of numbers, symbols, points, etc., placed in a given arrangement (rectangle, square, circle, ellipse, etc.), often in horizontal and vertical lines.
En la presente invención el término: "muestra problema", se refiere a la muestra a analizar y que contiene la sustancia o sustancias a identificar y/o determinar. In the present invention the term: "problem sample" refers to the sample to be analyzed and which contains the substance or substances to be identified and / or determined.
En la presente invención el término: "aislamientos microbianos", se refiere a la separación de los microorganismos o virus del medio en donde se encuentran originalmente. In the present invention the term: "microbial isolates" refers to the separation of microorganisms or viruses from the environment where they are originally found.
En la presente invención el término: "medio sólido", se refiere a un medio de cultivo de microorganismos de consistencia firme o sólida. Se diferencian de los semi-sólidos (consistencia fluida) y de los líquidos. In the present invention the term: "solid medium" refers to a medium of culture of microorganisms of firm or solid consistency. They differ from semi-solids (fluid consistency) and liquids.
En la presente invención el término: "relación señal ruido", se refiere al cociente entre la intensidad de una señal generada en el proceso de medida de un analito y la señal de un blanco (muestra sin analito) o del ruido electrónico. In the present invention the term: "signal to noise ratio" refers to the ratio between the intensity of a signal generated in the measurement process of an analyte and the signal of a blank (sample without analyte) or electronic noise.
En la presente invención el término: "tipo, factor y grupo de virus y/o bacteria", se refiere a: In the present invention the term: "type, factor and group of viruses and / or bacteria" refers to:
"Tipo": cada uno de los grandes grupos taxonómicos en que se dividen los reinos animal y vegetal, y que, a su vez, se subdividen en clases.  "Type": each of the large taxonomic groups into which the animal and plant kingdoms are divided, and which, in turn, are subdivided into classes.
"Factor": antígeno presente en la superficie celular. "Factor": antigen present on the cell surface.
"Grupo": conjunto de microorganismos con características genéticas, patogénicas, etc., similares.  "Group": set of microorganisms with genetic, pathogenic, etc. similar characteristics.
En la presente invención el término: "vigilancia epidemiológica", se refiere a un sistema de recolección y evaluación de información sobre eventos médico-epidemiológicos. In the present invention the term: "epidemiological surveillance" refers to a system for collecting and evaluating information on medical-epidemiological events.
En la presente invención el término: "control de calidad de agua y/o aire", se refiere a las acciones tendentes a regular la calidad del aire o del agua dentro de unos estándares. In the present invention the term: "quality control of water and / or air" refers to the actions aimed at regulating the quality of air or water within standards.
A lo largo de la descripción y las reivindicaciones la palabra "comprende" y sus variantes no pretenden excluir otras características técnicas, aditivos, componentes o pasos. Para los expertos en la materia, otros objetos, ventajas y características de la invención se desprenderán en parte de la descripción y en parte de la práctica de la invención. Las siguientes figuras y ejemplos se proporcionan a modo de ilustración, y no se pretende que sean limitativos de la presente invención. DESCRIPCIÓN DE LAS FIGURAS Throughout the description and the claims the word "comprises" and its variants are not intended to exclude other technical characteristics, additives, components or steps. For those skilled in the art, other objects, advantages and features of the invention will be derived partly from the description and partly from the practice of the invention. The following figures and examples are provided by way of illustration, and are not intended to be limiting of the present invention. DESCRIPTION OF THE FIGURES
FIGURA 1. Representación esquemática del sistema detector. Los servomecanismos de guiado del láser y giro del disco mantienen el haz láser enfocado en el camino en espiral del disco, permitiendo su rotación y escaneado. La luz reflejada es transformada en señal analógica eléctrica. Al mismo tiempo, el fotosensor detecta la marca (disparador), comenzando la adquisición de datos. La tarjeta de amplificación/detección (DAB) está integrada en la unidad grabadora. La tarjeta DAQ digitaliza las señales analógicas procedentes del la DAB y las transfiere al ordenador para procesarlas. El lector-grabador de CD se controla mediante un software (BioDisk) y se conecta al ordenador mediante un interfaz USB2.0. FIGURE 1. Schematic representation of the detector system. The laser guide and disk rotation servomechanisms keep the laser beam focused on the spiral path of the disk, allowing its rotation and scanning. The reflected light is transformed into an electrical analog signal. At the same time, the photosensor detects the mark (trigger), beginning the acquisition of data. The amplification / detection card (DAB) is integrated in the recorder unit. The DAQ card digitizes the analog signals from the DAB and transfers them to the computer for processing. The CD player-recorder is controlled by software (BioDisk) and connected to the computer through a USB2.0 interface.
FIGURA 2. Imágenes obtenidas tras la lectura del disco al analizar serotipos de Strepcococcus pneumoniae en aislamientos microbianos. El panel I corresponde al resultado de la identificación sin mareaje y el panel II a la respuesta obtenida posterior al proceso de tinción. FIGURE 2. Images obtained after reading the disc when analyzing serotypes of Strepcococcus pneumoniae in microbial isolates. Panel I corresponds to the result of identification without marking and panel II to the response obtained after the staining process.
FIGURA 3. Imágenes obtenidas tras la lectura del disco al analizar extractos de serotipos de Salmonella spp. Panel l-V: S. Malmoe 16263.1; S. Typhimurium 15994.3; S. Llandoff; control negativo. FIGURE 3. Images obtained after reading the disc when analyzing sermon extracts of Salmonella spp. Panel l-V: S. Malmoe 16263.1; S. Typhimurium 15994.3; S. Llandoff; negative control
FIGURA 4. Imágenes obtenidas tras la lectura del disco al analizar extractos de serotipos de E. coli. Panel l-IV: E. coli 0157:H7; E. coli O103:H2; E. coli 026:H1 1 ; control negativo. FIGURE 4. Images obtained after reading the disc when analyzing extracts of E. coli serotypes. Panel l-IV: E. coli 0157: H7; E. coli O103: H2; E. coli 026: H1 1; negative control
EJEMPLOS EXAMPLES
Los siguientes ejemplos específicos que se proporcionan en este documento de patente sirven para ilustrar la naturaleza de la presente invención. Estos ejemplos se incluyen solamente con fines ilustrativos y no han deser interpretados como limitaciones a la invención que aquí se reivindica. Por tanto, los ejemplos descritos más adelante ilustran la invención sin limitar el campo de aplicación de la misma. EJEMPLO 1 : Identificación de Strepcococcus pneumoniae The following specific examples provided in this patent document serve to illustrate the nature of the present invention. These examples are included for illustrative purposes only and they have not been interpreted as limitations to the invention claimed herein. Therefore, the examples described below illustrate the invention without limiting its scope of application. EXAMPLE 1: Identification of Strepcococcus pneumoniae
En el presente ejemplo o realización preferente dicho método In the present example or preferred embodiment said method
comprende los siguientes pasos: 1 . Resuspensión de bacterias It comprises the following steps: 1. Resuspension of bacteria
2. Inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz mediante adsorción en disco  2. Immobilization of antibodies contained in antisera in microarray format by disk adsorption
3. Incubación en disco compacto  3. Incubation on compact disk
4. Detección y determinación mediante un lector/grabador de discos 5. Amplificación de señal mediante tinción  4. Detection and determination by a disk reader / writer 5. Signal amplification by staining
6. Determinación  6. Determination
Resuspensión de bacterias En el presente ensayo de identificación y detección sin mareaje se parte de una suspensión de neumococos (Strepcococcus pneumoniae) previamente aislada de una muestra clínica y crecida en medios sólidos. Para ello las bacterias, crecidas previamente en medios sólidos, se recogen y posteriormente se resuspenden en 200 μΙ_ de disolución acuosa tamponada (TBS-T). Resuspension of bacteria In this identification and detection test without marking, we start from a suspension of pneumococci (Strepcococcus pneumoniae) previously isolated from a clinical sample and grown in solid media. For this, the bacteria, previously grown in solid media, are collected and subsequently resuspended in 200 μΙ_ of buffered aqueous solution (TBS-T).
Inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz mediante adsorción en disco La inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz se realiza preferentemente mediante adsorción, sin ser limitante para la invención. En este ejemplo, el anclaje de la bacteria al receptor se produce a través de la formación de enlaces de hidrógeno, fuerzas de van der Valls, enlaces hidrofóbicos entre el receptor y la superficie. En este caso, los receptores reaccionan con la superficie de las bacterias en disoluciones acuosas tamponadas, siendo el pH de las mismas una variable crítica para obtener una inmovilización estable de los antisueros. Immobilization of antibodies contained in antisera in microarray format by disk adsorption. Immobilization of antibodies contained in antiserum in microarray format is preferably performed by adsorption, without being limiting to the invention. In this example, the anchoring of the bacteria to the receptor occurs through the formation of hydrogen bonds, van der Valls forces, hydrophobic bonds between the receptor and the surface. In this case, the receptors react with the surface of the bacteria in buffered aqueous solutions, their pH being a critical variable to obtain a stable immobilization of the antisera.
En este caso, en la cara de policarbonato de un disco DVD se imprimen seis micromatrices de 144 puntos cada una (12 12). Cada matriz contiene puntos de 0,3-0,5 mm de diámetro separados 1 ,0 mm, dispensando disoluciones de antisuero (20-50 nl_), conteniendo los receptores o bioreceptores específicos para detectar e identificar cinco serotipos a nivel de tipo, factor y grupo parcial y puntos utilizados como control positivo. El tampón de impresión es una disolución acuosa de carbonato/bicarbonato 0,1 M, pH 9,5. Tras la impresión, el disco se deja incubar a 4 °C. Transcurridas 16 h el disco se lava con agua y se seca por centrifugación. Así, los seis antisueros se imprimen a cuatro diluciones diferentes con seis réplicas cada una. In this case, six micromatrices of 144 dots each (12 12) are printed on the polycarbonate side of a DVD disc. Each matrix contains 0.3-0.5 mm diameter points 1.0 mm apart, dispensing antiserum solutions (20-50 nl_), containing specific receptors or bioreceptors to detect and identify five serotypes at the type, factor level and partial group and points used as positive control. The printing buffer is an aqueous 0.1 M carbonate / bicarbonate solution, pH 9.5. After printing, the disc is allowed to incubate at 4 ° C. After 16 hours the disc is washed with water and dried by centrifugation. Thus, the six antisera are printed at four different dilutions with six replicates each.
Incubación en disco compacto Incubation on compact disk
Se toman 100 μΙ_ de la suspensión de bacterias, y se dispensan en una de las áreas del disco, dejándose incubar durante 15 min a temperatura ambiente. Finalmente, el disco se lava con agua y se seca por centrifugación. 100 μΙ_ of the bacteria suspension are taken, and dispensed in one of the areas of the disc, allowing to incubate for 15 min at room temperature. Finally, the disc is washed with water and dried by centrifugation.
Detección y determinación mediante un lector/grabador de discos Detection and determination by a disk reader / writer
La detección se realiza escaneando el disco con un lector/grabador de discos. La aparición de puntos en la imagen obtenida en el ordenador identifica el tipo, factor y grupo de bacteria presente en la muestra. Detection is done by scanning the disc with a disc reader / writer. The appearance of points in the image obtained on the computer identifies the type, factor and group of bacteria present in the sample.
Ampliación de señal mediante tinción Alternativamente, las bacterias pueden teñirse previa o posteriormente a la incubación en el disco mediante técnicas de tinción descritas para ello (tinción Gram +), aumentando así la relación señal ruido. Signal extension by staining Alternatively, the bacteria can be stained before or after incubation on the disc by staining techniques described for this (Gram + staining), thereby increasing the signal to noise ratio.
Determinación Determination
Los resultados obtenidos se muestran en la Tabla 1 . Como se puede observar cada antisuero inmovilizado en el disco reconoce al tipo o grupo de bacteria única y específicamente con una relación señal ruido entre 51 (s1 1 C) y 152 (s12). El control positivo se detecta para todas las cepas excepto s1 . The results obtained are shown in Table 1. As can be seen, each antiserum immobilized on the disc recognizes the type or group of bacteria unique and specifically with a signal to noise ratio between 51 (s1 1 C) and 152 (s12). The positive control is detected for all strains except s1.
Tabla 1. Relación señal ruido obtenidas al analizar simultáneamente seis suspensiones de neumococos (Strepcococcus neumoniae) en disco Table 1. Signal to noise ratio obtained by simultaneously analyzing six pneumococcal suspensions (Strepcococcus pneumoniae) on disk
Muestra (cepa) Sample (strain)
Antisuero en disco s1 s11 C s+ s12 s13 s20 s1 120 4 3 1 1 1 s11 1 51 1 1 2 3 s+ 1 49 34 10 21 17 s12 1 3 1 145 7 7 s13 1 4 1 2 69 6 s20 1 2 6 3 1 150  Disk antiserum s1 s11 C s + s12 s13 s20 s1 120 4 3 1 1 1 s11 1 51 1 1 2 3 s + 1 49 34 10 21 17 s12 1 3 1 145 7 7 s13 1 4 1 2 69 6 s20 1 2 6 3 1 150
EJEMPLO 2: Identificación de Salmonella spp. EXAMPLE 2: Identification of Salmonella spp.
En el presente ejemplo o realización preferente dicho método comprende los siguientes pasos: In the present example or preferred embodiment said method comprises the following steps:
1 . Resuspensión de bacterias one . Resuspension of bacteria
2. Inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz mediante adsorción en disco  2. Immobilization of antibodies contained in antisera in microarray format by disk adsorption
3. Incubación en disco compacto  3. Incubation on compact disk
4. Detección y determinación mediante un lector/grabador de discos 5. Amplificación de señal mediante tinción 4. Detection and determination by a disc reader / writer 5. Signal amplification by staining
6. Determinación  6. Determination
Resuspensión de bacterias Resuspension of bacteria
Se parte de una suspensión de Salmonella spp. en tampón TBS-T. It starts from a suspension of Salmonella spp. in TBS-T buffer.
En los apartados 2, 3, 4 y 5 se sigue el mismo procedimiento descrito en el ejemplo 1 con la única diferencia que se utilizan antisueros específicos para esta bacteria. In sections 2, 3, 4 and 5 the same procedure described in example 1 is followed with the only difference that specific antisera are used for this bacterium.
Determinación Determination
Los resultados obtenidos se muestran en la Figura 3. Como se puede observar en todos los casos, se obtuvieron respuestas positivas para el bloque control (matriz de la izquierda). Por otro lado, se obtuvieron resultados positivos (matriz de la derecha) en el bloque con anticuerpos específicos para cada tipo de Salmonella (paneles l-lll), siendo el resultado negativos para el control (panel IV). The results obtained are shown in Figure 3. As can be seen in all cases, positive responses were obtained for the control block (matrix on the left). On the other hand, positive results (right matrix) were obtained in the block with specific antibodies for each type of Salmonella (l-lll panels), the results being negative for the control (panel IV).
EJEMPLO 3: Identificación de Escherichia coli EXAMPLE 3: Identification of Escherichia coli
En el presente ejemplo o realización preferente dicho método comprende los siguientes pasos: In the present example or preferred embodiment said method comprises the following steps:
1 . Resuspensión de bacterias one . Resuspension of bacteria
2. Inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz mediante adsorción en disco  2. Immobilization of antibodies contained in antisera in microarray format by disk adsorption
3. Incubación en disco compacto  3. Incubation on compact disk
4. Detección y determinación mediante un lector/grabador de discos 4. Detection and determination by a disc reader / writer
5. Amplificación de señal mediante tinción 5. Signal amplification by staining
6. Determinación Resuspensión de bacterias 6. Determination Resuspension of bacteria
Se parte de una suspensión de E. coli en tampón TBS-T. It starts from a suspension of E. coli in TBS-T buffer.
Inmovilización de anticuerpos contenidos en antisueros en formato de micromatriz mediante adsorción en disco Immobilization of antibodies contained in antisera in microarray format by disk adsorption
En los apartados 2, 3, 4 y 5 se sigue el mismo procedimiento descrito en el ejemplo 1 , con la única diferencia que se utilizan antisueros específicos para esta bacteria. In sections 2, 3, 4 and 5 the same procedure described in example 1 is followed, with the only difference that specific antisera are used for this bacterium.
Determinación Determination
La selectividad del ensayo fue determinada utilizando diferentes serotipos de E. coli. La Figura 4 muestra las imágenes obtenidas tras la lectura del disco al analizar extractos de colonia pura. Como se puede observar en todos los casos, se obtuvieron respuestas positivas para el bloque control (matriz de la izquierda). Por otro lado, se obtuvieron resultados positivos (matriz de la derecha) en el bloque con anticuerpos específicos para cada serotipo de E. coli (paneles l-lll), siendo el resultado negativos para el control (panel IV). The selectivity of the assay was determined using different E. coli serotypes. Figure 4 shows the images obtained after reading the disc when analyzing extracts of pure colony. As can be seen in all cases, positive responses were obtained for the control block (matrix on the left). On the other hand, positive results (right matrix) were obtained in the block with specific antibodies for each E. coli serotype (l-lll panels), the results being negative for the control (panel IV).

Claims

REIVINDICACIONES
1 . Un método para identificar y/o detectar sin mareaje el tipo y/o grupo de al menos un virus y/o una bacteria previamente aislada e incubada en un medio sólido, caracterizado por comprender los siguientes pasos esenciales: one . A method for identifying and / or detecting without type the group and / or group of at least one virus and / or a bacterium previously isolated and incubated in a solid medium, characterized by comprising the following essential steps:
a) resuspender el virus y/o bacteria;  a) resuspend the virus and / or bacteria;
b) inmovilizar al menos un receptor de una molécula de la superficie del virus y/o bacteria, formando una micromatriz en un disco compacto;  b) immobilize at least one receptor of a molecule from the surface of the virus and / or bacteria, forming a microarray on a compact disk;
c) incubar la suspensión obtenida en el paso a) en el disco compacto obtenido en el paso b),  c) incubate the suspension obtained in step a) on the compact disc obtained in step b),
d) detectar el virus y/o bacteria en el disco compacto mediante la lectura del disco con un lector/grabador de discos compactos; y e) determinar el tipo y/o grupo del virus y/o bacteria.  d) detect the virus and / or bacteria on the compact disc by reading the disc with a compact disc reader / writer; and e) determine the type and / or group of the virus and / or bacteria.
2. El método según la reivindicación 1 caracterizado por que antes o después del paso c) comprende el siguiente paso adicional: 2. The method according to claim 1 characterized in that before or after step c) comprises the following additional step:
f) teñir el virus y/o bacteria.  f) stain the virus and / or bacteria.
3. El método según las reivindicaciones 1 -2, caracterizado por que la muestra se selecciona de entre el siguiente grupo: sangre, líquido pleural, líquido cefalorraquídeo, saliva, esputo, orina, y secreción lacrimal. 3. The method according to claims 1-2, characterized in that the sample is selected from the following group: blood, pleural fluid, cerebrospinal fluid, saliva, sputum, urine, and tear secretion.
4. El método según las reivindicaciones 1 -3, caracterizado por que la micromatriz del paso b) se inmoviliza en la cara de policarbonato del disco manteniendo las propiedades ópticas y mecánicas del disco. 4. The method according to claims 1 -3, characterized in that the microarray of step b) is immobilized on the polycarbonate face of the disk while maintaining the optical and mechanical properties of the disk.
5. El método según las reivindicaciones 1 -4, caracterizado por que la micromatriz del paso b) comprende entre 50 - 200 puntos que comprenden al menos un receptor de una molécula de la superficie del virus y/o bacteria. 5. The method according to claims 1-4, characterized in that the microarray of step b) comprises between 50-200 points comprising at least one receptor of a surface molecule of the virus and / or bacteria.
6. El método según la reivindicación 5, caracterizado por que los puntos tienen al menos entre 0,3-0,5 mm de diámetro y están separados al menos 1 ,0 mm. 6. The method according to claim 5, characterized in that the points are at least 0.3-0.5 mm in diameter and at least 1.0 mm apart.
7. El método según las reivindicaciones 1 -6, caracterizado por que el lector/grabador de discos compactos definido en el paso d) utiliza el láser del propio grabador como haz de luz interrogante y el fotodiodo propio del cabezal pickup como elemento detector. 7. The method according to claims 1-6, characterized in that the compact disc reader / writer defined in step d) uses the laser of the recorder itself as a beam of questioning light and the photodiode of the pickup head as the detector element.
8. El método según la reivindicación 7, caracterizado por que el haz de luz del láser es absorbido y dispersado por al menos un precipitado producido por la interacción específica del receptor con el virus y/o bacteria, disminuyendo la intensidad de la señal de reflexión que detecta el fotodiodo del cabezal pickup. 8. The method according to claim 7, characterized in that the laser light beam is absorbed and dispersed by at least one precipitate produced by the specific interaction of the receptor with the virus and / or bacteria, decreasing the intensity of the reflection signal which detects the photodiode of the pickup head.
9. El método según la reivindicación 8, caracterizado por que la disminución de señal de reflexión se relaciona directamente con la interacción específica del receptor con el virus y/o bacteria. 9. The method according to claim 8, characterized in that the decrease in reflection signal is directly related to the specific interaction of the receptor with the virus and / or bacteria.
10. El método según las reivindicaciones 1 -9, caracterizado por que la determinación del tipo y/o grupo del virus y/o bacteria definida en el paso e) se realiza visualmente con una plantilla que indica la localización del receptor y de una tabla en la que se encuentran las diferentes combinaciones de señales positivas del receptor, indicándose también a qué tipo y/o grupo de bacteria y/o virus corresponden dichas señales. 10. The method according to claims 1-9, characterized in that the determination of the type and / or group of the virus and / or bacteria defined in step e) is performed visually with a template indicating the location of the receptor and a table in which the different combinations of positive signals of the receptor are found, also indicating to what type and / or group of bacteria and / or viruses these signals correspond.
1 1 . El método según las reivindicaciones 1 -10, caracterizado por que el paso b) se realiza mediante la inmovilización de anticuerpos contenidos en antisueros mediante adsorción en disco. eleven . The method according to claims 1-10, characterized in that step b) is performed by immobilizing antibodies contained in antisera by disk adsorption.
12. El método según la reivindicación 1 1 , caracterizado por que la inmovilización de anticuerpos contenidos en antisueros mediante adsorción en disco comprende los siguientes pasos: 12. The method according to claim 1, characterized in that the immobilization of antibodies contained in antisera by disk adsorption comprises the following steps:
i) imprimir el disco con al menos una disolución de antisuero en presencia de un tampón de impresión,  i) print the disc with at least one antiserum solution in the presence of a printing buffer,
ii) incubar al menos a 4 °C durante un periodo de tiempo de al menos 16 horas,  ii) incubate at least 4 ° C for a period of at least 16 hours,
iii) lavar y secar el disco.  iii) wash and dry the disc.
13. El método según la reivindicación 12, caracterizado por que la disolución de antisuero del paso i) contiene al menos un anticuerpo del virus y/o bacteria. 13. The method according to claim 12, characterized in that the antiserum solution of step i) contains at least one virus and / or bacterial antibody.
14. Un método para inmovilizar al menos un receptor de una molécula de la superficie de al menos un virus y/o una bacteria, caracterizado por emplear como soporte un disco compacto, dicho método comprende los siguientes pasos: i) imprimir la cara de policarbonato del disco con al menos una disolución de antisuero en presencia de un tampón de impresión, 14. A method for immobilizing at least one receptor of a molecule of the surface of at least one virus and / or a bacterium, characterized by using a compact disc as support, said method comprises the following steps: i) printing the polycarbonate face of the disk with at least one antiserum solution in the presence of a printing buffer,
ii) incubar al menos a 4 °C durante un periodo de tiempo de al menos 16 horas, y  ii) incubate at least 4 ° C for a period of at least 16 hours, and
iii) lavar y secar el disco, donde se mantienen las propiedades ópticas y mecánicas del disco.  iii) wash and dry the disc, where the optical and mechanical properties of the disc are maintained.
15. Un disco compacto caracterizado por comprender al menos un receptor inmovilizado de una molécula de la superficie de al menos un virus y/o una bacteria, formando una micromatriz para ser leído por un lector/grabador de discos compactos. 15. A compact disc characterized by comprising at least one immobilized receptor of a surface molecule of at least one virus and / or a bacterium, forming a microarray to be read by a compact disc reader / writer.
16. El disco según la reivindicación 15, caracterizado porque se obtiene mediante el método definido en la reivindicación 14. 16. The disk according to claim 15, characterized in that obtained by the method defined in claim 14.
17. Uso del disco definido en las reivindicaciones 15-16, para identificar y/o detectar sin mareaje el tipo y/o grupo de al menos un virus y/o una bacteria previamente aislada e incubada en un medio sólido. 17. Use of the disk defined in claims 15-16, to identify and / or detect without typesetting the type and / or group of at least one virus and / or a bacterium previously isolated and incubated in a solid medium.
18. Uso según la reivindicación 17, caracterizado por que la identificación y/o detección sin mareaje del tipo y/o grupo de al menos un virus y/o una bacteria es para vigilancia epidemiológica. 18. Use according to claim 17, characterized in that the identification and / or detection without marking of the type and / or group of at least one virus and / or a bacterium is for epidemiological surveillance.
19. Uso según la reivindicación 17, caracterizado por que la identificación y/o detección sin mareaje del tipo y/o grupo de al menos un virus y/o una bacteria es para control de calidad de agua y/o aire. 19. Use according to claim 17, characterized in that the identification and / or detection without marking of the type and / or group of at least one virus and / or a bacterium is for quality control of water and / or air.
PCT/ES2013/070158 2012-03-13 2013-03-12 Method for the label-free identification of viruses and bacteria, using compact disc technology WO2013135933A1 (en)

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Citations (1)

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