WO2013040562A2 - Microfluidic loading apparatus and methods - Google Patents

Microfluidic loading apparatus and methods Download PDF

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Publication number
WO2013040562A2
WO2013040562A2 PCT/US2012/055769 US2012055769W WO2013040562A2 WO 2013040562 A2 WO2013040562 A2 WO 2013040562A2 US 2012055769 W US2012055769 W US 2012055769W WO 2013040562 A2 WO2013040562 A2 WO 2013040562A2
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WIPO (PCT)
Prior art keywords
droplet
fluid
reservoir
actuator
vessel
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PCT/US2012/055769
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French (fr)
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WO2013040562A3 (en
Inventor
Uichong Yi
Vijay Srinivasan
Andrew White
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Advanced Liquid Logic Inc
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Publication of WO2013040562A2 publication Critical patent/WO2013040562A2/en
Publication of WO2013040562A3 publication Critical patent/WO2013040562A3/en

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    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/02Burettes; Pipettes
    • B01L3/0241Drop counters; Drop formers
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • B01L3/502715Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by interfacing components, e.g. fluidic, electrical, optical or mechanical interfaces
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N35/00Automatic analysis not limited to methods or materials provided for in any single one of groups G01N1/00 - G01N33/00; Handling materials therefor
    • G01N35/10Devices for transferring samples or any liquids to, in, or from, the analysis apparatus, e.g. suction devices, injection devices
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/06Fluid handling related problems
    • B01L2200/0647Handling flowable solids, e.g. microscopic beads, cells, particles
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/06Fluid handling related problems
    • B01L2200/0684Venting, avoiding backpressure, avoid gas bubbles
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/06Fluid handling related problems
    • B01L2200/0689Sealing
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/14Process control and prevention of errors
    • B01L2200/143Quality control, feedback systems
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00Additional constructional details
    • B01L2300/02Identification, exchange or storage of information
    • B01L2300/024Storing results with means integrated into the container
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00Additional constructional details
    • B01L2300/02Identification, exchange or storage of information
    • B01L2300/025Displaying results or values with integrated means
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00Additional constructional details
    • B01L2300/18Means for temperature control
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2400/00Moving or stopping fluids
    • B01L2400/04Moving fluids with specific forces or mechanical means
    • B01L2400/0403Moving fluids with specific forces or mechanical means specific forces
    • B01L2400/0406Moving fluids with specific forces or mechanical means specific forces capillary forces
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2400/00Moving or stopping fluids
    • B01L2400/04Moving fluids with specific forces or mechanical means
    • B01L2400/0403Moving fluids with specific forces or mechanical means specific forces
    • B01L2400/043Moving fluids with specific forces or mechanical means specific forces magnetic forces
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2400/00Moving or stopping fluids
    • B01L2400/04Moving fluids with specific forces or mechanical means
    • B01L2400/0403Moving fluids with specific forces or mechanical means specific forces
    • B01L2400/0457Moving fluids with specific forces or mechanical means specific forces passive flow or gravitation
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01LCHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/50Containers for the purpose of retaining a material to be analysed, e.g. test tubes
    • B01L3/502Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
    • B01L3/5027Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip
    • B01L3/502769Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by multiphase flow arrangements
    • B01L3/502784Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by multiphase flow arrangements specially adapted for droplet or plug flow, e.g. digital microfluidics
    • B01L3/502792Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures by integrated microfluidic structures, i.e. dimensions of channels and chambers are such that surface tension forces are important, e.g. lab-on-a-chip characterised by multiphase flow arrangements specially adapted for droplet or plug flow, e.g. digital microfluidics for moving individual droplets on a plate, e.g. by locally altering surface tension

Definitions

  • the invention relates to apparatuses for delivering fluids to a microfluidic device, methods therewith, and systems therewith. Background
  • a droplet actuator typically includes one or more substrates configured to form a surface or gap for conducting droplet operations.
  • the one or more substrates establish a droplet operations surface or gap for conducting droplet operations and may also include electrodes arranged to conduct the droplet operations.
  • the droplet operations substrate or the gap between the substrates may be coated or filled with a filler fluid that is immiscible with the liquid that forms the droplets.
  • Some assays require large volumes of fluid (e.g., pyrosequencing and wash buffer).
  • space on a droplet actuator is limited. Additional volumes of fluid can be delivered to the droplet actuator from an external reservoir.
  • an external reservoir that uses a micro-pump system.
  • an external system such as the micro-pump system, can be expensive in terms of both cost and space. Therefore, there is a need for other approaches to delivering large volumes of fluid to droplet actuators.
  • Activate means affecting a change in the electrical state of the one or more electrodes which, in the presence of a droplet, results in a droplet operation.
  • Activation of an electrode can be accomplished using alternating or direct current. Any suitable voltage may be used.
  • an electrode may be activated using a voltage which is greater than about 150 V, or greater than about 200 V, or greater than about 250 V, or from about 275 V to about 375 V, or about 300 V.
  • any suitable frequency may be employed.
  • an electrode may be activated using alternating current having a frequency from about 1 Hz to about 100 Hz, or from about 10 Hz to about 60 Hz, or from about 20 Hz to about 40 Hz, or about 30 Hz.
  • Bead with respect to beads on a droplet actuator, means any bead or particle that is capable of interacting with a droplet on or in proximity with a droplet actuator.
  • Beads may be any of a wide variety of shapes, such as spherical, generally spherical, egg shaped, disc shaped, cubical, amorphous and other three dimensional shapes.
  • the bead may, for example, be capable of being subjected to a droplet operation in a droplet on a droplet actuator or otherwise configured with respect to a droplet actuator in a manner which permits a droplet on the droplet actuator to be brought into contact with the bead on the droplet actuator and/or off the droplet actuator.
  • Beads may be provided in a droplet, in a droplet operations gap, or on a droplet operations surface. Beads may be provided in a reservoir that is external to a droplet operations gap or situated apart from a droplet operations surface, and the reservoir may be associated with a fluid path that permits a droplet including the beads to be brought into a droplet operations gap or into contact with a droplet operations surface. Beads may be manufactured using a wide variety of materials, including for example, resins, and polymers. The beads may be any suitable size, including for example, microbeads, microparticles, nanobeads and nanoparticles. In some cases, beads are magnetically responsive; in other cases beads are not significantly magnetically responsive.
  • the magnetically responsive material may constitute substantially all of a bead, a portion of a bead, or only one component of a bead.
  • the remainder of the bead may include, among other things, polymeric material, coatings, and moieties which permit attachment of an assay reagent.
  • suitable beads include flow cytometry microbeads, polystyrene microparticles and nanoparticles, functionalized polystyrene microparticles and nanoparticles, coated polystyrene microparticles and nanoparticles, silica microbeads, fluorescent microspheres and nanospheres, functionalized fluorescent microspheres and nanospheres, coated fluorescent microspheres and nanospheres, color dyed microparticles and nanoparticles, magnetic microparticles and nanoparticles, superparamagnetic microparticles and nanoparticles (e.g., DYNABEADS® particles, available from Invitrogen Group, Carlsbad, CA), fluorescent microparticles and nanoparticles, coated magnetic microparticles and nanoparticles, ferromagnetic microparticles and nanoparticles, coated ferromagnetic microparticles and nanoparticles, and those described in U.S.
  • DYNABEADS® particles available from Invitrogen Group, Carlsbad,
  • Beads may be pre-coupled with a biomolecule or other substance that is able to bind to and form a complex with a biomolecule. Beads may be pre-coupled with an antibody, protein or antigen, DNA/RNA probe or any other molecule with an affinity for a desired target. Examples of droplet actuator techniques for immobilizing magnetically responsive beads and/or non-magnetically responsive beads and/or conducting droplet operations protocols using beads are described in U.S. Patent
  • Droplet means a volume of liquid on a droplet actuator.
  • a droplet is at least partially bounded by a filler fluid.
  • a droplet may be completely surrounded by a filler fluid or may be bounded by filler fluid and one or more surfaces of the droplet actuator.
  • a droplet may be bounded by filler fluid, one or more surfaces of the droplet actuator, and/or the atmosphere.
  • a droplet may be bounded by filler fluid and the atmosphere.
  • Droplets may, for example, be aqueous or non-aqueous or may be mixtures or emulsions including aqueous and non-aqueous components.
  • Droplets may take a wide variety of shapes; nonlimiting examples include generally disc shaped, slug shaped, truncated sphere, ellipsoid, spherical, partially compressed sphere, hemispherical, ovoid, cylindrical, combinations of such shapes, and various shapes formed during droplet operations, such as merging or splitting or formed as a result of contact of such shapes with one or more surfaces of a droplet actuator.
  • droplet fluids that may be subjected to droplet operations using the approach of the invention, see International Patent
  • a droplet may include a biological sample, such as whole blood, lymphatic fluid, serum, plasma, sweat, tear, saliva, sputum, cerebrospinal fluid, amniotic fluid, seminal fluid, vaginal excretion, serous fluid, synovial fluid, pericardial fluid, peritoneal fluid, pleural fluid, transudates, exudates, cystic fluid, bile, urine, gastric fluid, intestinal fluid, fecal samples, liquids containing single or multiple cells, liquids containing organelles, fluidized tissues, fluidized organisms, liquids containing multi- celled organisms, biological swabs and biological washes.
  • a biological sample such as whole blood, lymphatic fluid, serum, plasma, sweat, tear, saliva, sputum, cerebrospinal fluid, amniotic fluid, seminal fluid, vaginal excretion, serous fluid, synovial fluid, pericardial fluid, peritoneal fluid, pleural fluid, transudates, exu
  • a droplet may include a reagent, such as water, deionized water, saline solutions, acidic solutions, basic solutions, detergent solutions and/or buffers.
  • reagents such as a reagent for a biochemical protocol, such as a nucleic acid amplification protocol, an affinity-based assay protocol, an enzymatic assay protocol, a sequencing protocol, and/or a protocol for analyses of biological fluids.
  • Droplet Actuator means a device for manipulating droplets.
  • droplet actuators see Pamula et al., U.S. Patent 6,911,132, entitled “Apparatus for Manipulating
  • Certain droplet actuators will include one or more substrates arranged with a gap therebetween and electrodes associated with (e.g., layered on, attached to, and/or embedded in) the one or more substrates and arranged to conduct one or more droplet operations.
  • certain droplet actuators will include a base (or bottom) substrate, droplet operations electrodes associated with the substrate, one or more dielectric layers atop the substrate and/or electrodes, and optionally one or more hydrophobic layers atop the substrate, dielectric layers and/or the electrodes forming a droplet operations surface.
  • a top substrate may also be provided, which is separated from the droplet operations surface by a gap, commonly referred to as a droplet operations gap.
  • a gap commonly referred to as a droplet operations gap.
  • Various electrode arrangements on the top and/or bottom substrates are discussed in the above-referenced patents and applications and certain novel electrode arrangements are discussed in the description of the invention.
  • droplets During droplet operations it is preferred that droplets remain in continuous contact or frequent contact with a ground or reference electrode.
  • a ground or reference electrode may be associated with the top substrate facing the gap, the bottom substrate facing the gap, in the gap.
  • electrical contacts for coupling the electrodes to a droplet actuator instrument for controlling or monitoring the electrodes may be associated with one or both plates.
  • electrodes on one substrate are electrically coupled to the other substrate so that only one substrate is in contact with the droplet actuator.
  • a conductive material e.g., an epoxy, such as MASTER BONDTM Polymer System EP79, available from Master Bond, Inc., Hackensack, NJ
  • a spacer may be provided between the substrates to determine the height of the gap therebetween and define dispensing reservoirs.
  • the spacer height may, for example, be from about 5 ⁇ to about 600 ⁇ , or about 100 ⁇ to about 400 ⁇ , or about 200 ⁇ to about 350 ⁇ , or about 250 ⁇ to about 300 ⁇ , or about 275 ⁇ .
  • the spacer may, for example, be formed of a layer of projections form the top or bottom substrates, and/or a material inserted between the top and bottom substrates.
  • One or more openings may be provided in the one or more substrates for forming a fluid path through which liquid may be delivered into the droplet operations gap.
  • the one or more openings may in some cases be aligned for interaction with one or more electrodes, e.g., aligned such that liquid flowed through the opening will come into sufficient proximity with one or more droplet operations electrodes to permit a droplet operation to be effected by the droplet operations electrodes using the liquid.
  • the base (or bottom) and top substrates may in some cases be formed as one integral component.
  • One or more reference electrodes may be provided on the base (or bottom) and/or top substrates and/or in the gap. Examples of reference electrode arrangements are provided in the above referenced patents and patent applications.
  • the manipulation of droplets by a droplet actuator may be electrode mediated, e.g., electrowetting mediated or di electrophoresis mediated or Coulombic force mediated.
  • electrode mediated e.g., electrowetting mediated or di electrophoresis mediated or Coulombic force mediated.
  • other techniques for controlling droplet operations include using devices that induce hydrodynamic fluidic pressure, such as those that operate on the basis of mechanical principles (e.g. external syringe pumps, pneumatic membrane pumps, vibrating membrane pumps, vacuum devices, centrifugal forces, piezoelectric/ultrasonic pumps and acoustic forces); electrical or magnetic principles (e.g.
  • thermodynamic principles e.g. gas bubble generation/phase-change-induced volume expansion
  • other kinds of surface-wetting principles e.g. electrowetting, and optoelectrowetting, as well as chemically, thermally, structurally and radioactively induced surface-tension gradients
  • gravity e.g., capillary action
  • electrostatic forces e.g., electroosmotic flow
  • centrifugal flow substrate disposed on a compact disc and rotated
  • magnetic forces e.g., oscillating ions causes flow
  • magnetohydrodynamic forces and vacuum or pressure differential.
  • combinations of two or more of the foregoing techniques may be employed to conduct a droplet operation in a droplet actuator of the invention.
  • one or more of the foregoing may be used to deliver liquid into a droplet operations gap, e.g., from a reservoir in another device or from an external reservoir of the droplet actuator (e.g., a reservoir associated with a droplet actuator substrate and a fluid path from the reservoir into the droplet operations gap).
  • Droplet operations surfaces of certain droplet actuators of the invention may be made from hydrophobic materials or may be coated or treated to make them hydrophobic.
  • some portion or all of the droplet operations surfaces may be derivatized with low surface-energy materials or chemistries, e.g., by deposition or using in situ synthesis using compounds such as poly- or per-fluorinated compounds in solution or polymerizable monomers.
  • low surface-energy materials or chemistries e.g., by deposition or using in situ synthesis using compounds such as poly- or per-fluorinated compounds in solution or polymerizable monomers. Examples include TEFLON® AF
  • the droplet operations surface may include a hydrophobic coating having a thickness ranging from about 10 nm to about 1,000 nm.
  • the top substrate of the droplet actuator includes an electrically conducting organic polymer, which is then coated with a hydrophobic coating or otherwise treated to make the droplet operations surface hydrophobic.
  • the electrically conducting organic polymer that is deposited onto a plastic substrate may be poly(3,4-ethylenedioxythiophene) poly(styrenesulfonate) (PEDOT:PSS).
  • PDOT:PSS poly(3,4-ethylenedioxythiophene) poly(styrenesulfonate)
  • Other examples of electrically conducting organic polymers and alternative conductive layers are described in Pollack et al., International Patent Application No. PCT/US2010/040705, entitled “Droplet Actuator Devices and Methods," the entire disclosure of which is incorporated herein by reference.
  • One or both substrates may be fabricated using a printed circuit board (PCB), glass, indium tin oxide (ITO)-coated glass, and/or semiconductor materials as the substrate.
  • the ITO coating is preferably a thickness in the range of about 20 to about 200 nm, preferably about 50 to about 150 nm, or about 75 to about 125 nm, or about 100 nm.
  • the top and/or bottom substrate includes a PCB substrate that is coated with a dielectric, such as a polyimide dielectric, which may in some cases also be coated or otherwise treated to make the droplet operations surface hydrophobic.
  • the substrate includes a PCB
  • the following materials are examples of suitable materials: MITSUITM BN-300 (available from MITSUI Chemicals America, Inc., San Jose CA); ARLONTM 1 IN (available from Arlon, Inc, Santa Ana, CA).; NELCO® N4000-6 and N5000-30/32 (available from Park Electrochemical
  • ISOLATM FR406 available from Isola Group, Chandler, AZ), especially IS620; fluoropolymer family (suitable for fluorescence detection since it has low background fluorescence); polyimide family; polyester; polyethylene naphthalate; polycarbonate; polyetheretherketone; liquid crystal polymer; cyclo-olefm copolymer (COC); cyclo-olefm polymer (COP); aramid; THERMOUNT® nonwoven aramid reinforcement
  • vapor deposited dielectric such as PARYLENETM C (especially on glass) and PARYLENETM N (available from Parylene Coating Services, Inc., Katy, TX); TEFLON® AF coatings; cytop; soldermasks, such as liquid photoimageable soldermasks (e.g., on PCB) like TAIYOTM PSR4000 series, TAIYOTM PSR and AUS series (available from Taiyo America, Inc.
  • Droplet transport voltage and frequency may be selected for performance with reagents used in specific assay protocols.
  • Design parameters may be varied, e.g., number and placement of on-actuator reservoirs, number of independent electrode connections, size (volume) of different reservoirs, placement of magnets ead washing zones, electrode size, inter-electrode pitch, and gap height (between top and bottom substrates) may be varied for use with specific reagents, protocols, droplet volumes, etc.
  • a substrate of the invention may derivatized with low surface-energy materials or chemistries, e.g., using deposition or in situ synthesis using poly- or per-fluorinated compounds in solution or polymerizable monomers.
  • the droplet operations surface may be coated with a substance for reducing background noise, such as background fluorescence from a PCB substrate.
  • the noise-reducing coating may include a black matrix resin, such as the black matrix resins available from Toray industries, Inc., Japan. Electrodes of a droplet actuator are typically controlled by a controller or a processor, which is itself provided as part of a system, which may include processing functions as well as data and software storage and input and output capabilities.
  • Reagents may be provided on the droplet actuator in the droplet operations gap or in a reservoir fluidly coupled to the droplet operations gap.
  • the reagents may be in liquid form, e.g., droplets, or they may be provided in a reconstitutable form in the droplet operations gap or in a reservoir fluidly coupled to the droplet operations gap.
  • Reconstitutable reagents may typically be combined with liquids for reconstitution.
  • An example of reconstitutable reagents suitable for use with the invention includes those described in Meathrel, et al., U.S. Patent 7,727,466, entitled “Disintegratable films for diagnostic devices," granted on June 1, 2010.
  • Droplet operation means any manipulation of a droplet on a droplet actuator.
  • a droplet operation may, for example, include: loading a droplet into the droplet actuator; dispensing one or more droplets from a source droplet; splitting, separating or dividing a droplet into two or more droplets; transporting a droplet from one location to another in any direction; merging or combining two or more droplets into a single droplet; diluting a droplet; mixing a droplet; agitating a droplet; deforming a droplet; retaining a droplet in position; incubating a droplet; heating a droplet; vaporizing a droplet; cooling a droplet; disposing of a droplet; transporting a droplet out of a droplet actuator; other droplet operations described herein; and/or any combination of the foregoing.
  • merge “merge,” “merging,” “combine,” “combining” and the like are used to describe the creation of one droplet from two or more droplets. It should be understood that when such a term is used in reference to two or more droplets, any combination of droplet operations that are sufficient to result in the combination of the two or more droplets into one droplet may be used. For example, “merging droplet A with droplet B,” can be achieved by transporting droplet A into contact with a stationary droplet B, transporting droplet B into contact with a stationary droplet A, or transporting droplets A and B into contact with each other.
  • splitting is not intended to imply any particular outcome with respect to volume of the resulting droplets (i.e., the volume of the resulting droplets can be the same or different) or number of resulting droplets (the number of resulting droplets may be 2, 3, 4, 5 or more).
  • mixing refers to droplet operations which result in more homogenous distribution of one or more components within a droplet. Examples of “loading” droplet operations include microdialysis loading, pressure assisted loading, robotic loading, passive loading, and pipette loading. Droplet operations may be electrode-mediated. In some cases, droplet operations are further facilitated by the use of hydrophilic and/or hydrophobic regions on surfaces and/or by physical obstacles.
  • Impedance or capacitance sensing or imaging techniques may sometimes be used to determine or confirm the outcome of a droplet operation. Examples of such techniques are described in Stunner et al., International Patent Pub. No. WO/2008/101194, entitled “Capacitance Detection in a Droplet Actuator,” published on August 21, 2008, the entire disclosure of which is incorporated herein by reference. Generally speaking, the sensing or imaging techniques may be used to confirm the presence or absence of a droplet at a specific electrode. For example, the presence of a dispensed droplet at the destination electrode following a droplet dispensing operation confirms that the droplet dispensing operation was effective.
  • Droplet transport time can be quite fast. For example, in various embodiments, transport of a droplet from one electrode to the next may exceed about 1 sec, or about 0.1 sec, or about 0.01 sec, or about 0.001 sec.
  • the electrode is operated in AC mode but is switched to DC mode for imaging. It is helpful for conducting droplet operations for the footprint area of droplet to be similar to electrowetting area; in other words, lx-, 2x- 3x-droplets are usefully controlled operated using 1, 2, and 3 electrodes, respectively.
  • the difference between the droplet size and the number of electrodes should typically not be greater than 1; in other words, a 2x droplet is usefully controlled using 1 electrode and a 3x droplet is usefully controlled using 2 electrodes.
  • droplets include beads, it is useful for droplet size to be equal to the number of electrodes controlling the droplet, e.g., transporting the droplet.
  • Filler fluid means a fluid associated with a droplet operations substrate of a droplet actuator, which fluid is sufficiently immiscible with a droplet phase to render the droplet phase subject to electrode -mediated droplet operations.
  • the gap of a droplet actuator is typically filled with a filler fluid.
  • the filler fluid may, for example, be a low- viscosity oil, such as silicone oil or hexadecane filler fluid.
  • the filler fluid may fill the entire gap of the droplet actuator or may coat one or more surfaces of the droplet actuator.
  • Filler fluids may be conductive or non-conductive. Filler fluids may, for example, be doped with surfactants or other additives.
  • additives may be selected to improve droplet operations and/or reduce loss of reagent or target substances from droplets, formation of microdroplets, cross contamination between droplets, contamination of droplet actuator surfaces, degradation of droplet actuator materials, etc.
  • Composition of the filler fluid, including surfactant doping may be selected for performance with reagents used in the specific assay protocols and effective interaction or non-interaction with droplet actuator materials. Examples of filler fluids and filler fluid formulations suitable for use with the invention are provided in Srinivasan et al, International Patent Pub. Nos.
  • Immobilize with respect to magnetically responsive beads, means that the beads are substantially restrained in position in a droplet or in filler fluid on a droplet actuator.
  • immobilized beads are sufficiently restrained in position in a droplet to permit execution of a droplet splitting operation, yielding one droplet with substantially all of the beads and one droplet substantially lacking in the beads.
  • Magnetically responsive means responsive to a magnetic field.
  • Magnetically responsive beads include or are composed of magnetically responsive materials. Examples of magnetically responsive materials include paramagnetic materials, ferromagnetic materials, ferrimagnetic materials, and metamagnetic materials. Examples of suitable paramagnetic materials include iron, nickel, and cobalt, as well as metal oxides, such as Fe 3 0 4 , BaFei 2 Oi 9 ,
  • CoO, NiO, Mn 2 0 3 , Cr 2 0 3 , and CoMnP CoO, NiO, Mn 2 0 3 , Cr 2 0 3 , and CoMnP.
  • a droplet actuator system of the invention may include on-cartridge reservoirs and/or off-cartridge reservoirs.
  • On-cartridge reservoirs may be (1) on-actuator reservoirs, which are reservoirs in the droplet operations gap or on the droplet operations surface; (2) off-actuator reservoirs, which are reservoirs on the droplet actuator cartridge, but outside the droplet operations gap, and not in contact with the droplet operations surface; or (3) hybrid reservoirs which have on-actuator regions and off-actuator regions.
  • An example of an off-actuator reservoir is a reservoir in the top substrate.
  • An off-actuator reservoir is typically in fluid communication with an opening or fluid path arranged for flowing liquid from the off-actuator reservoir into the droplet operations gap, such as into an on-actuator reservoir.
  • An off-cartridge reservoir may be a reservoir that is not part of the droplet actuator cartridge at all, but which flows liquid to some portion of the droplet actuator cartridge.
  • an off-cartridge reservoir may be part of a system or docking station to which the droplet actuator cartridge is coupled during operation.
  • an off-cartridge reservoir may be a reagent storage container or syringe which is used to force fluid into an on-cartridge reservoir or into a droplet operations gap.
  • a system using an off-cartridge reservoir will typically include a fluid passage means whereby liquid may be transferred from the off- cartridge reservoir into an on-cartridge reservoir or into a droplet operations gap.
  • Transporting into the magnetic field of a magnet is intended to refer to transporting into a region of a magnetic field capable of substantially attracting magnetically responsive beads in the droplet.
  • transporting away from a magnet or magnetic field is intended to refer to transporting away from a region of a magnetic field capable of substantially attracting magnetically responsive beads in the droplet, whether or not the droplet or magnetically responsive beads is completely removed from the magnetic field. It will be appreciated that in any of such cases described herein, the droplet may be transported towards or away from the desired region of the magnetic field, and/or the desired region of the magnetic field may be moved towards or away from the droplet.
  • references to an electrode, a droplet, or magnetically responsive beads being "within” or “in” a magnetic field, or the like, is intended to describe a situation in which the electrode is situated in a manner which permits the electrode to transport a droplet into and/or away from a desired region of a magnetic field, or the droplet or magnetically responsive beads is/are situated in a desired region of the magnetic field, in each case where the magnetic field in the desired region is capable of substantially attracting any magnetically responsive beads in the droplet.
  • a system, a droplet actuator, or another component of a system may include a magnet, such as one or more permanent magnets (e.g., a single cylindrical or bar magnet or an array of such magnets, such as a Halbach array) or an electromagnet or array of electromagnets, to form a magnetic field for interacting with magnetically responsive beads or other components on chip.
  • a magnet such as one or more permanent magnets (e.g., a single cylindrical or bar magnet or an array of such magnets, such as a Halbach array) or an electromagnet or array of electromagnets, to form a magnetic field for interacting with magnetically responsive beads or other components on chip.
  • Such interactions may, for example, include substantially immobilizing or restraining movement or flow of magnetically responsive beads during storage or in a droplet during a droplet operation or pulling magnetically responsive beads out of a droplet.
  • Washing with respect to washing a bead means reducing the amount and/or concentration of one or more substances in contact with the bead or exposed to the bead from a droplet in contact with the bead.
  • the reduction in the amount and/or concentration of the substance may be partial, substantially complete, or even complete.
  • the substance may be any of a wide variety of substances; examples include target substances for further analysis, and unwanted substances, such as components of a sample, contaminants, and/or excess reagent.
  • a washing operation begins with a starting droplet in contact with a magnetically responsive bead, where the droplet includes an initial amount and initial concentration of a substance. The washing operation may proceed using a variety of droplet operations.
  • the washing operation may yield a droplet including the magnetically responsive bead, where the droplet has a total amount and/or concentration of the substance which is less than the initial amount and/or concentration of the substance.
  • suitable washing techniques are described in Pamula et al., U.S. Patent 7,439,014, entitled “Droplet-Based Surface Modification and Washing,” granted on October 21, 2008, the entire disclosure of which is incorporated herein by reference.
  • top bottom
  • over under
  • under on
  • the terms “top,” “bottom,” “over,” “under,” and “on” are used throughout the description with reference to the relative positions of components of the droplet actuator, such as relative positions of top and bottom substrates of the droplet actuator. It will be appreciated that the droplet actuator is functional regardless of its orientation in space.
  • a liquid in any form e.g., a droplet or a continuous body, whether moving or stationary
  • a liquid in any form e.g., a droplet or a continuous body, whether moving or stationary
  • an electrode, array, matrix or surface such liquid could be either in direct contact with the electrode/array/matrix/surface, or could be in contact with one or more layers or films that are interposed between the liquid and the electrode/array /matrix/surface.
  • a droplet When a droplet is described as being “on” or “loaded on” a droplet actuator, it should be understood that the droplet is arranged on the droplet actuator in a manner which facilitates using the droplet actuator to conduct one or more droplet operations on the droplet, the droplet is arranged on the droplet actuator in a manner which facilitates sensing of a property of or a signal from the droplet, and/or the droplet has been subjected to a droplet operation on the droplet actuator.
  • Figure 1 illustrates a top view and a side view of a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators
  • Figure 2 shows a plot of an example of flow rates vs. height H of the gravity-driven constant pressure head dispenser
  • Figures 3A through 3C illustrate examples of fluid delivery methods using the gravity-driven constant pressure head dispenser
  • Figures 4 and 5 illustrate side views of the gravity-driven constant pressure head dispenser and a process of installing the dispenser into a droplet actuator
  • Figure 6 illustrates a functional block diagram of an example of a microfluidics system that includes a droplet actuator.
  • An aspect of an embodiment of the invention may include an apparatus for delivering fluid to a microfluidic device having a vessel, an inlet in fluid communication with the vessel, an outlet in fluid communication with the vessel; and an outlet that is configured to deliver one or more volumes of fluid to one or more microfluidics devices.
  • An aspect of an embodiment of the invention may include an apparatus having an outlet that delivers volumes of fluid to a microfluidics device having a droplet actuator.
  • An aspect of an embodiment of the invention may include an apparatus having a vessel that may be cylindrical.
  • An aspect of an embodiment of the invention may include an apparatus having an outlet that may be in fluid communication with the inlet.
  • An aspect of an embodiment of the invention may include an apparatus having a first end of the vessel that may be enclosed.
  • An aspect of an embodiment of the invention may include an apparatus having a second end of the vessel that may be funnel shaped.
  • An aspect of an embodiment of the invention may include an apparatus having an outlet that may be a hole feeding a tube.
  • An aspect of an embodiment of the invention may include an apparatus having a vessel that may be in fluid communication with a seal.
  • An aspect of an embodiment of the invention may include an apparatus having a seal that may be configured to be opened by one or more of shearing, ripping, puncturing, thermal, electrical and mechanical.
  • An aspect of an embodiment of the invention may include an apparatus where the fluid may be delivered to one or more of an off-actuator reservoir, an on-actuator reservoir, directly onto a droplet operations surface and directly into a droplet operations gap of a droplet actuator.
  • An aspect of an embodiment of the invention may include an apparatus having an off- cartridge reservoir that may be one or more of a reagent storage reservoir or a syringe.
  • An aspect of an embodiment of the invention may include an off-cartridge reservoir that may be one or more of a pipette tip or a well of a multi-well plate.
  • An aspect of an embodiment of the invention may include an apparatus where the vessel may also include one or more of an off-cartridge reservoir and an on-cartridge reservoir.
  • An aspect of an embodiment of the invention may include an apparatus where a seal is configured to be opened during rotational or translational insertion of a dispenser into a receptacle.
  • An aspect of an embodiment of the invention may include an apparatus wherein the top substrate material is glass, injection-molded plastic, or silicon.
  • An aspect of an embodiment of the invention may include a fluid delivery method including providing a dispenser having at least one outlet in fluid communication with a reservoir wherein the dispenser is configured to communicate a fluid to a microfluidics device, and delivering a volume of fluid stored in the vessel from the outlet to the microfluidics device
  • An aspect of an embodiment of the invention may include dispensing the volume of fluid to a droplet actuator.
  • An aspect of an embodiment of the invention may include dispensing the volume of fluid periodically or continuously.
  • An aspect of an embodiment of the invention may include dispensing in drops, dispensing the volume of fluid in bulk, or both.
  • An aspect of an embodiment of the invention may include dispensing one or more volumes of fluid from above the oil interface, dispensing one or more volumes of fluid from below the oil interface, or both.
  • An aspect of an embodiment of the invention may include a system having a dispenser comprising a vessel connected to an outlet and an inlet, a droplet actuator comprising a reservoir electrode in fluid communication with the outlet, and an electrical circuit for controlling the system components electrically connected to the reservoir electrode.
  • An aspect of an embodiment of the invention may include a system where the top substrate may have an insertion slot.
  • An aspect of an embodiment of the invention may include a system where the bottom substrate may have a printed circuit board.
  • An aspect of an embodiment of the invention may include a system that may have an input port integrated into the top substrate.
  • An aspect of an embodiment of the invention may include a system that may have a gravity- driven constant pressure head dispenser.
  • An aspect of an embodiment of the invention may include a system that may have a droplet actuator.
  • An additional aspect of an embodiment of the invention may include a system that may have a top reservoir electrode that is fluidly connected to microfluidic device comprising a droplet actuator.
  • An additional aspect of an embodiment of the invention may include a method of dispensing one or more materials between a dispenser and one or more reservoir electrodes on the surface of a bottom substrate.
  • a further aspect includes dispensing directly into a droplet operations gap of a droplet actuator.
  • a further aspect includes dispensing directly onto a droplet operations surface of a droplet actuator.
  • the invention is a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators.
  • the gravity-driven dispenser of the invention provides a reagent container that is mounted on the top substrate and delivers fluid at the appropriate rate, without use of pumps.
  • the gravity-driven dispenser is a simple and inexpensive design that has no moving parts.
  • the fluid delivery rate of the gravity-driven dispenser may be set by manipulating the diameter of an inlet, the diameter of an outlet, and the distance between the two.
  • fluid may be delivered into an off-actuator reservoir, an on-actuator reservoir, and/or directly into the droplet operations gap of the droplet actuator.
  • the gravity- driven dispenser delivers fluid into an on-actuator reservoir.
  • FIG. 1 illustrates a top view and a side view of a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators.
  • the gravity- driven constant pressure head dispenser is referred to as gravity-driven dispenser 100.
  • Gravity-driven dispenser 100 includes a vessel 110, which is sized to hold a certain volume of fluid, such as fluid 116.
  • Vessel 110 may be, for example, a cylinder- shaped tube.
  • One end of vessel 1 10 is enclosed.
  • the opposite end of vessel 110 is funnel-shaped.
  • An outlet 1 12 is provided at the narrow end of the funnel-shaped portion of vessel 1 10.
  • outlet 1 12 may be a hole or opening.
  • outlet 112 may be a hole feeding a tube.
  • Outlet 112 has a certain diameter D out .
  • inlet 1 14 is provided along the side of vessel 1 10.
  • inlet 1 14 may be a hole or opening. Additionally, inlet 1 14 may be a hole feeding a tube.
  • Inlet 114 has a certain diameter D in . There is a certain height H between outlet 112 and inlet 114.
  • gravity-driven dispenser 100 is filled with a certain amount of fluid 1 16, such as reagent fluid.
  • fluid 1 16 such as reagent fluid.
  • Inlet 114 serves as a vent for allowing air to enter vessel 1 10.
  • Figure 1 shows air bubbles 1 18 entering vessel 110 through inlet 1 14.
  • droplets 120 of fluid 116 are dispensed from outlet 112.
  • gravity-driven dispenser 100 there are two competing pressures in gravity-driven dispenser 100 - (1) hydrostatic pressure Phydmstatic on the fluid inside the main vessel 1 10, which is measured up to inlet 114; and (2) capillary pressures p cap mary at outlet 112.
  • the total pressure gradient in gravity-driven dispenser 100 must be greater than 0. If height H is too small or diameters D out and D in are too small the capillary pressures ⁇ will dominate the system, preventing any dispensing. Therefore, aside from the fluid properties, the fluid delivery rate of gravity-driven dispenser 100 may be set by manipulating the diameter D out of outlet 1 12, the diameter D in of inlet 114, and the height H between outlet 112 and inlet 1 14. Generally, the smaller the diameters D out and D in the slower the flow rate. The larger the diameters D out and ⁇ the faster the flow rate.
  • the operation of gravity-driven dispenser 100 may be according to the following equations.
  • Table 1 shows an example flow rates when holding diameter D out of outlet 112 and diameter D in of inlet 1 14 constant, while varying height H. Additionally, Figure 2 shows a plot 200 of flow rates vs. height H of gravity-driven dispenser 100 according to the information in Table 1.
  • drops do not necessarily dispense at perfect intervals. Instead, they may dispense in clusters of 2-4 drops in between relatively long periods. However, the average drop frequency may remain nearly constant.
  • Figures 3A through 3D illustrate examples of fluid delivery methods using gravity-driven dispenser 100.
  • Figures 3 A through 3D show gravity-driven dispenser 100 in relation to a droplet actuator 300.
  • Droplet actuator 300 may include a bottom substrate 310 and a top substrate 312 that are separated by a gap 314.
  • Bottom substrate 310 may, for example, be a printed circuit board (PCB).
  • Top substrate 312 may, for example, be formed of glass, injection -molded plastic, and/or silicon.
  • Bottom substrate 310 may include a line, path, and/or array of droplet operations electrodes (not shown). Droplet operations are conducted atop droplet operations electrodes on a droplet operations surface.
  • An input port 316 i.e., an opening
  • a port (e.g., input port 316) is an entrance/exit (opening) to the droplet operations gap. Liquid may flow through the port into any portion of the gap. That could be into a reservoir region of the gap or onto a droplet operations pathway.
  • Gap 314 may be filled with filler fluid 318.
  • Filler fluid 318 may, for example, be a low-viscosity oil, such as silicone oil or hexadecane filler fluid.
  • gravity-driven dispenser 100 is used to deliver periodically a single drop from above the oil interface.
  • gravity-driven dispenser 100 is used to deliver periodically a single drop from below the oil interface.
  • gravity-driven dispenser 100 is used to deliver fluid 116 in bulk into gap 314 of droplet actuator 300.
  • outlet 112 of gravity-driven dispenser 100 is positioned close enough to the droplet operations surface of bottom substrate 310 such that the drop of fluid 116 never detaches and fluid 116 is delivered almost continuously into gap
  • Figures 4 and 5 illustrate side views of gravity-driven dispenser 100 and a process of installing the dispenser into a droplet actuator 400.
  • Figures 4 and 5 show gravity-driven dispenser 100 in relation to a droplet actuator 400.
  • Droplet actuator 400 may include a bottom substrate 410 and a top substrate 412 that are separated by a gap 414.
  • Bottom substrate 410 may, for example, be a PCB.
  • Top substrate 412 may, for example, be formed of glass, injection-molded plastic, and/or silicon.
  • a receptacle 416 for receiving gravity-driven dispenser 100 is integrated into top substrate 412. The shape of receptacle 416 substantially corresponds to the shape of gravity-driven dispenser 100.
  • Top substrate 412 also includes an opening (or input port) 418 that substantially aligns with outlet 112 when gravity-driven dispenser 100 is fully installed.
  • Top substrate 412 also includes a vent path 420 that substantially aligns with inlet 114 when gravity-driven dispenser 100 is fully installed.
  • Bottom substrate 410 may include a line, path, and/or array of droplet operations electrodes (not shown) and/or one or more reservoir electrodes.
  • bottom substrate 410 includes at least one reservoir electrode 422 that substantially aligns with opening 418 of top substrate 412. Droplet operations are conducted atop droplet operations electrodes on a droplet operations surface.
  • FIG 4 shows gravity-driven dispenser 100 in position to be installed, but not yet installed in receptacle 416 of droplet actuator 400.
  • Gravity-driven dispenser 100 is filled with fluid 116 and a seal 130 is covering inlet 114 to prevent leakage therethrough. No seal is at outlet 112, but because gravity-driven dispenser 100 is enclosed and currently not vented, no fluid 116 leaks from outlet 112.
  • Figure 5 shows gravity-driven dispenser 100 installed in receptacle 416 of droplet actuator 400.
  • seal 130 may be sheered off, ripped off, and/or punctured, thereby opening inlet 114.
  • seal 130 may be opened by any other means.
  • seal 130 may be opened by thermal means, electrical means, and/or mechanical means. As soon as seal 130 is broken, inlet 1 14 is open to vent path 420 and dispensing begins from outlet 1 12 at a specified flow rate.
  • Figure 6 illustrates a functional block diagram of an example of a microfluidics system 600 that includes a droplet actuator 605.
  • Digital micro fluidic technology conducts droplet operations on discrete droplets in a droplet actuator, such as droplet actuator 605, by electrical control of their surface tension (electrowetting).
  • the droplets may be sandwiched between two substrates of droplet actuator 605, a bottom substrate and a top substrate separated by a gap.
  • the bottom substrate may, for example, be a PCB with an arrangement of electrically addressable electrodes.
  • the top substrate may, for example, be an injection molded plastic substrate that includes a reference electrode plane made, for example, from conductive ink or indium tin oxide (ITO).
  • ITO indium tin oxide
  • the bottom substrate and the top substrate may be coated with a hydrophobic material.
  • the space around the droplets may be filled with an immiscible inert fluid, such as silicone oil, to prevent evaporation of the droplets and to facilitate their transport within the device.
  • an immiscible inert fluid such as silicone oil
  • Other droplet operations may be effected by varying the patterns of voltage activation; examples include merging, splitting, mixing, and dispensing of droplets.
  • Droplet actuator 605 may be designed to fit onto an instrument deck (not shown) of microfluidics system 600.
  • the instrument deck may hold droplet actuator 605 and house other droplet actuator features, such as, but not limited to, one or more magnets and one or more heating devices.
  • the instrument deck may house one or more magnets 610, which may be permanent magnets.
  • the instrument deck may house one or more electromagnets 615. Magnets 610 and/or electromagnets 615 are positioned in relation to droplet actuator 605 for immobilization of magnetically responsive beads.
  • the positions of magnets 610 and/or electromagnets 615 may be controlled by a motor 620.
  • the instrument deck may house one or more heating devices 625 for controlling the temperature within, for example, certain reaction and/or washing zones of droplet actuator 605.
  • heating devices 625 may be heater bars that are positioned in relation to droplet actuator 605 for providing thermal control thereof.
  • a controller 630 of micro fluidics system 600 is electrically coupled to various hardware components of the invention, such as droplet actuator 605, electromagnets 615, motor 620, and heating devices 625, as well as to a detector 635, an impedance sensing system 640, and any other input and/or output devices (not shown). Controller 630 controls the overall operation of microfluidics system 600. Controller 630 may, for example, be a general purpose computer, special purpose computer, personal computer, or other programmable data processing apparatus. Controller 630 serves to provide processing capabilities, such as storing, interpreting, and/or executing software instructions, as well as controlling the overall operation of the system. Controller 630 may be configured and programmed to control data and/or power aspects of these devices. For example, in one aspect, with respect to droplet actuator 605, controller 630 controls droplet manipulation by activating/deactivating electrodes.
  • detector 635 may be an imaging system that is positioned in relation to droplet actuator 605.
  • the imaging system may include one or more light- emitting diodes (LEDs) (i.e., an illumination source) and a digital image capture device, such as a charge-coupled device (CCD) camera.
  • LEDs light- emitting diodes
  • CCD charge-coupled device
  • Impedance sensing system 640 may be any circuitry for detecting impedance at a specific electrode of droplet actuator 605.
  • impedance sensing system 640 may be an impedance spectrometer.
  • Impedance sensing system 640 may be used to monitor the capacitive loading of any electrode, such as any droplet operations electrode, with or without a droplet thereon.
  • suitable capacitance detection techniques see Stunner et al., International Patent Publication No. WO/2008/101194, entitled “Capacitance Detection in a Droplet Actuator," published on Aug. 21, 2008; and Kale et al., International Patent Publication No. WO/2002/080822, entitled “System and Method for Dispensing Liquids,” published on Oct. 17, 2002; the entire disclosures of which are incorporated herein by reference.
  • Droplet actuator 605 may include disruption device 645.
  • Disruption device 645 may include any device that promotes disruption (lysis) of materials, such as tissues, cells and spores in a droplet actuator.
  • Disruption device 645 may, for example, be a sonication mechanism, a heating mechanism, a mechanical shearing mechanism, a bead beating mechanism, physical features incorporated into the droplet actuator 605, an electric field generating mechanism, a thermal cycling mechanism, and any combinations thereof.
  • Disruption device 645 may be controlled by controller 630.
  • aspects of the invention may be embodied as a method, system, computer readable medium, and/or computer program product.
  • aspects of the invention may take the form of hardware embodiments, software embodiments (including firmware, resident software, micro-code, etc.), or embodiments combining software and hardware aspects that may all generally be referred to herein as a "circuit,” “module” or “system.”
  • the methods of the invention may take the form of a computer program product on a computer-usable storage medium having computer-usable program code embodied in the medium.
  • the computer-usable or computer-readable medium may be, for example but not limited to, an electronic, magnetic, optical, electromagnetic, infrared, or semiconductor system, apparatus, device, or propagation medium.
  • the computer readable medium may include transitory and/or non-transitory embodiments.
  • the computer-readable medium would include some or all of the following: an electrical connection having one or more wires, a portable computer diskette, a hard disk, a random access memory (RAM), a read-only memory (ROM), an erasable programmable read-only memory (EPROM or Flash memory), an optical fiber, a portable compact disc read-only memory (CD-ROM), an optical storage device, a transmission medium such as those supporting the Internet or an intranet, or a magnetic storage device.
  • RAM random access memory
  • ROM read-only memory
  • EPROM or Flash memory erasable programmable read-only memory
  • CD-ROM compact disc read-only memory
  • CD-ROM compact disc read-only memory
  • a transmission medium such as those supporting the Internet or an intranet, or a magnetic storage device.
  • the computer- usable or computer-readable medium could even be paper or another suitable medium upon which the program is printed, as the program can be electronically captured, via, for instance, optical scanning of the paper or other medium, then compiled, interpreted, or otherwise processed in a suitable manner, if necessary, and then stored in a computer memory.
  • a computer-usable or computer-readable medium may be any medium that can contain, store, communicate, propagate, or transport the program for use by or in connection with the instruction execution system, apparatus, or device.
  • Program code for carrying out operations of the invention may be written in an object oriented programming language such as Java, Smalltalk, C++ or the like.
  • program code for carrying out operations of the invention may also be written in conventional procedural programming languages, such as the "C” programming language or similar programming languages.
  • the program code may be executed by a processor, application specific integrated circuit (ASIC), or other component that executes the program code.
  • ASIC application specific integrated circuit
  • the program code may be simply referred to as a software application that is stored in memory (such as the computer readable medium discussed above).
  • the program code may cause the processor (or any processor-controlled device) to produce a graphical user interface ("GUI").
  • GUI graphical user interface
  • the graphical user interface may be visually produced on a display device, yet the graphical user interface may also have audible features.
  • the program code may operate in any processor-controlled device, such as a computer, server, personal digital assistant, phone, television, or any processor-controlled device utilizing the processor and/or a digital signal processor.
  • the program code may locally and/or remotely execute.
  • the program code for example, may be entirely or partially stored in local memory of the processor-controlled device.
  • the program code may also be at least partially remotely stored, accessed, and downloaded to the processor-controlled device.
  • a user's computer for example, may entirely execute the program code or only partly execute the program code.
  • the program code may be a stand-alone software package that is at least partly on the user's computer and/or partly executed on a remote computer or entirely on a remote computer or server. In the latter scenario, the remote computer may be connected to the user's computer through a communications network.
  • the invention may be applied regardless of networking environment.
  • the communications network may be a cable network operating in the radio-frequency domain and/or the Internet Protocol (IP) domain.
  • IP Internet Protocol
  • the communications network may also include a distributed computing network, such as the Internet (sometimes alternatively known as the "World Wide Web"), an intranet, a local-area network (LAN), and/or a wide-area network (WAN).
  • the communications network may include coaxial cables, copper wires, fiber optic lines, and/or hybrid- coaxial lines.
  • the communications network may even include wireless portions utilizing any portion of the electromagnetic spectrum and any signaling standard (such as the IEEE 802 family of standards, GSM/CDMA/TDMA or any cellular standard, and/or the ISM band).
  • the communications network may even include powerline portions, in which signals are communicated via electrical wiring.
  • the invention may be applied to any wireless/wireline communications network, regardless of physical componentry, physical configuration, or communications standard(s). Certain aspects of invention are described with reference to various methods and method steps. It will be understood that each method step can be implemented by the program code and/or by machine instructions. The program code and/or the machine instructions may create means for implementing the functions/acts specified in the methods.
  • the program code may also be stored in a computer-readable memory that can direct the processor, computer, or other programmable data processing apparatus to function in a particular manner, such that the program code stored in the computer-readable memory produce or transform an article of manufacture including instruction means which implement various aspects of the method steps.
  • the program code may also be loaded onto a computer or other programmable data processing apparatus to cause a series of operational steps to be performed to produce a processor/computer implemented process such that the program code provides steps for implementing various functions/acts specified in the methods of the invention.

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Abstract

The present invention relates to apparatuses for delivering one or more volumes of fluids to one or more microfluidics devices. The invention further relates to methods for delivering one or more volumes of fluids to one or more microfluidics devices. Additionally, the invention relates to systems that include apparatuses for delivering one or more volumes of fluids to one or more microfluidics devices.

Description

Microfluidic Loading Apparatus and Methods Related Applications
This patent application is related to and claims priority to U.S. Provisional Patent Application No. 61/535,330, filed on September 15, 2011, entitled "Microfluidic Loading Apparatus and Methods," the entire disclosure of which is incorporated herein by reference. Government Interest
This invention was made with government support under Grant No. N10PC20104 awarded by the Dep't of Homeland Security (DHS IAA HSHQDC-lO-X-00190). The United States Government has certain rights in the invention.
Field of the Invention
The invention relates to apparatuses for delivering fluids to a microfluidic device, methods therewith, and systems therewith. Background
A droplet actuator typically includes one or more substrates configured to form a surface or gap for conducting droplet operations. The one or more substrates establish a droplet operations surface or gap for conducting droplet operations and may also include electrodes arranged to conduct the droplet operations. The droplet operations substrate or the gap between the substrates may be coated or filled with a filler fluid that is immiscible with the liquid that forms the droplets.
Some assays require large volumes of fluid (e.g., pyrosequencing and wash buffer). However, space on a droplet actuator is limited. Additional volumes of fluid can be delivered to the droplet actuator from an external reservoir. One example is an external reservoir that uses a micro-pump system. Unfortunately, an external system, such as the micro-pump system, can be expensive in terms of both cost and space. Therefore, there is a need for other approaches to delivering large volumes of fluid to droplet actuators. Definitions
As used herein, the following terms have the meanings indicated.
"Activate," with reference to one or more electrodes, means affecting a change in the electrical state of the one or more electrodes which, in the presence of a droplet, results in a droplet operation. Activation of an electrode can be accomplished using alternating or direct current. Any suitable voltage may be used. For example, an electrode may be activated using a voltage which is greater than about 150 V, or greater than about 200 V, or greater than about 250 V, or from about 275 V to about 375 V, or about 300 V. Where alternating current is used, any suitable frequency may be employed. For example, an electrode may be activated using alternating current having a frequency from about 1 Hz to about 100 Hz, or from about 10 Hz to about 60 Hz, or from about 20 Hz to about 40 Hz, or about 30 Hz.
"Bead," with respect to beads on a droplet actuator, means any bead or particle that is capable of interacting with a droplet on or in proximity with a droplet actuator. Beads may be any of a wide variety of shapes, such as spherical, generally spherical, egg shaped, disc shaped, cubical, amorphous and other three dimensional shapes. The bead may, for example, be capable of being subjected to a droplet operation in a droplet on a droplet actuator or otherwise configured with respect to a droplet actuator in a manner which permits a droplet on the droplet actuator to be brought into contact with the bead on the droplet actuator and/or off the droplet actuator. Beads may be provided in a droplet, in a droplet operations gap, or on a droplet operations surface. Beads may be provided in a reservoir that is external to a droplet operations gap or situated apart from a droplet operations surface, and the reservoir may be associated with a fluid path that permits a droplet including the beads to be brought into a droplet operations gap or into contact with a droplet operations surface. Beads may be manufactured using a wide variety of materials, including for example, resins, and polymers. The beads may be any suitable size, including for example, microbeads, microparticles, nanobeads and nanoparticles. In some cases, beads are magnetically responsive; in other cases beads are not significantly magnetically responsive. For magnetically responsive beads, the magnetically responsive material may constitute substantially all of a bead, a portion of a bead, or only one component of a bead. The remainder of the bead may include, among other things, polymeric material, coatings, and moieties which permit attachment of an assay reagent. Examples of suitable beads include flow cytometry microbeads, polystyrene microparticles and nanoparticles, functionalized polystyrene microparticles and nanoparticles, coated polystyrene microparticles and nanoparticles, silica microbeads, fluorescent microspheres and nanospheres, functionalized fluorescent microspheres and nanospheres, coated fluorescent microspheres and nanospheres, color dyed microparticles and nanoparticles, magnetic microparticles and nanoparticles, superparamagnetic microparticles and nanoparticles (e.g., DYNABEADS® particles, available from Invitrogen Group, Carlsbad, CA), fluorescent microparticles and nanoparticles, coated magnetic microparticles and nanoparticles, ferromagnetic microparticles and nanoparticles, coated ferromagnetic microparticles and nanoparticles, and those described in U.S. Patent Publication Nos. 20050260686, entitled "Multiplex flow assays preferably with magnetic particles as solid phase," published on November 24, 2005; 20030132538, entitled "Encapsulation of discrete quanta of fluorescent particles," published on July 17, 2003; 20050118574, entitled "Multiplexed Analysis of Clinical Specimens Apparatus and Method," published on June 2,
2005; 20050277197. Entitled "Microparticles with Multiple Fluorescent Signals and Methods of Using Same," published on December 15, 2005; 20060159962, entitled "Magnetic Microspheres for use in Fluorescence-based Applications," published on July 20, 2006; the entire disclosures of which are incorporated herein by reference for their teaching concerning beads and magnetically responsive materials and beads. Beads may be pre-coupled with a biomolecule or other substance that is able to bind to and form a complex with a biomolecule. Beads may be pre-coupled with an antibody, protein or antigen, DNA/RNA probe or any other molecule with an affinity for a desired target. Examples of droplet actuator techniques for immobilizing magnetically responsive beads and/or non-magnetically responsive beads and/or conducting droplet operations protocols using beads are described in U.S. Patent
Application No. 11/639,566, entitled "Droplet-Based Particle Sorting," filed on December 15, 2006; U.S. Patent Application No. 61/039,183, entitled "Multiplexing Bead Detection in a Single Droplet," filed on March 25, 2008; U.S. Patent Application No. 61/047,789, entitled "Droplet Actuator Devices and Droplet Operations Using Beads," filed on April 25, 2008; U.S. Patent Application No. 61/086,183, entitled "Droplet Actuator Devices and Methods for
Manipulating Beads," filed on August 5, 2008; International Patent Application No. PCT/US2008/053545, entitled "Droplet Actuator Devices and Methods Employing Magnetic Beads," filed on February 11, 2008; International Patent Application No. PCT/US2008/058018, entitled "Bead-based Multiplexed Analytical Methods and Instrumentation," filed on March 24, 2008; International Patent Application No.
PCT/US2008/058047, "Bead Sorting on a Droplet Actuator," filed on March 23, 2008; and International Patent Application No. PCT/US2006/047486, entitled "Droplet-based Biochemistry," filed on December 11, 2006; the entire disclosures of which are incorporated herein by reference. Bead characteristics may be employed in the multiplexing aspects of the invention. Examples of beads having characteristics suitable for multiplexing, as well as methods of detecting and analyzing signals emitted from such beads, may be found in U.S. Patent Publication No. 20080305481, entitled "Systems and Methods for Multiplex Analysis of PCR in Real Time," published on December 11, 2008; U.S. Patent Publication No. 20080151240, "Methods and Systems for Dynamic Range Expansion," published on June 26, 2008; U.S. Patent Publication No. 20070207513, entitled "Methods, Products, and Kits for Identifying an Analyte in a Sample," published on September 6, 2007; U.S. Patent Publication
No. 20070064990, entitled "Methods and Systems for Image Data Processing," published on March 22, 2007; U.S. Patent Publication No. 20060159962, entitled "Magnetic Microspheres for use in Fluorescence-based Applications," published on July 20, 2006; U.S. Patent Publication No. 20050277197, entitled "Microparticles with Multiple Fluorescent Signals and Methods of Using Same," published on December 15, 2005; and U.S. Patent Publication No.
20050118574, entitled "Multiplexed Analysis of Clinical Specimens Apparatus and Method," published on June 2, 2005.
"Droplet" means a volume of liquid on a droplet actuator. Typically, a droplet is at least partially bounded by a filler fluid. For example, a droplet may be completely surrounded by a filler fluid or may be bounded by filler fluid and one or more surfaces of the droplet actuator.
As another example, a droplet may be bounded by filler fluid, one or more surfaces of the droplet actuator, and/or the atmosphere. As yet another example, a droplet may be bounded by filler fluid and the atmosphere. Droplets may, for example, be aqueous or non-aqueous or may be mixtures or emulsions including aqueous and non-aqueous components. Droplets may take a wide variety of shapes; nonlimiting examples include generally disc shaped, slug shaped, truncated sphere, ellipsoid, spherical, partially compressed sphere, hemispherical, ovoid, cylindrical, combinations of such shapes, and various shapes formed during droplet operations, such as merging or splitting or formed as a result of contact of such shapes with one or more surfaces of a droplet actuator. For examples of droplet fluids that may be subjected to droplet operations using the approach of the invention, see International Patent
Application No. PCT/US 06/47486, entitled, "Droplet-Based Biochemistry," filed on December 11, 2006. In various embodiments, a droplet may include a biological sample, such as whole blood, lymphatic fluid, serum, plasma, sweat, tear, saliva, sputum, cerebrospinal fluid, amniotic fluid, seminal fluid, vaginal excretion, serous fluid, synovial fluid, pericardial fluid, peritoneal fluid, pleural fluid, transudates, exudates, cystic fluid, bile, urine, gastric fluid, intestinal fluid, fecal samples, liquids containing single or multiple cells, liquids containing organelles, fluidized tissues, fluidized organisms, liquids containing multi- celled organisms, biological swabs and biological washes. Moreover, a droplet may include a reagent, such as water, deionized water, saline solutions, acidic solutions, basic solutions, detergent solutions and/or buffers. Other examples of droplet contents include reagents, such as a reagent for a biochemical protocol, such as a nucleic acid amplification protocol, an affinity-based assay protocol, an enzymatic assay protocol, a sequencing protocol, and/or a protocol for analyses of biological fluids.
"Droplet Actuator" means a device for manipulating droplets. For examples of droplet actuators, see Pamula et al., U.S. Patent 6,911,132, entitled "Apparatus for Manipulating
Droplets by Electrowetting-Based Techniques," issued on June 28, 2005; Pamula et al., U.S. Patent Application No. 11/343,284, entitled "Apparatuses and Methods for Manipulating Droplets on a Printed Circuit Board," filed on filed on January 30, 2006; Pollack et al., International Patent Application No. PCT/US2006/047486, entitled "Droplet-Based Biochemistry," filed on December 11, 2006; Shenderov, U.S. Patents 6,773,566, entitled
"Electrostatic Actuators for Microfluidics and Methods for Using Same," issued on August 10, 2004 and 6,565,727, entitled "Actuators for Microfluidics Without Moving Parts," issued on January 24, 2000; Kim and/or Shah et al., U.S. Patent Application Nos. 10/343,261, entitled "Electrowetting-driven Micropumping," filed on January 27, 2003, 11/275,668, entitled "Method and Apparatus for Promoting the Complete Transfer of Liquid Drops from a
Nozzle," filed on January 23, 2006, 11/460,188, entitled "Small Object Moving on Printed Circuit Board," filed on January 23, 2006, 12/465,935, entitled "Method for Using Magnetic Particles in Droplet Microfluidics," filed on May 14, 2009, and 12/513,157, entitled "Method and Apparatus for Real-time Feedback Control of Electrical Manipulation of Droplets on Chip," filed on April 30, 2009; Velev, U.S. Patent 7,547,380, entitled "Droplet Transportation
Devices and Methods Having a Fluid Surface," issued on June 16, 2009; Sterling et al., U.S. Patent 7,163,612, entitled "Method, Apparatus and Article for Microfluidic Control via Electrowetting, for Chemical, Biochemical and Biological Assays and the Like," issued on January 16, 2007; Becker and Gascoyne et al., U.S. Patent Nos. 7,641,779, entitled "Method and Apparatus for Programmable fluidic Processing," issued on January 5, 2010, and
6,977,033, entitled "Method and Apparatus for Programmable fluidic Processing," issued on December 20, 2005; Deere et al., U.S. Patent 7,328,979, entitled "System for Manipulation of a Body of Fluid," issued on February 12, 2008; Yamakawa et al., U.S. Patent Pub. No. 20060039823, entitled "Chemical Analysis Apparatus," published on February 23, 2006; Wu, International Patent Pub. No. WO/2009/003184, entitled "Digital Microfluidics Based
Apparatus for Heat-exchanging Chemical Processes," published on December 31, 2008; Fouillet et al., U.S. Patent Pub. No. 20090192044, entitled "Electrode Addressing Method," published on July 30, 2009; Fouillet et al., U.S. Patent 7,052,244, entitled "Device for Displacement of Small Liquid Volumes Along a Micro-catenary Line by Electrostatic Forces," issued on May 30, 2006; Marchand et al., U.S. Patent Pub. No. 20080124252, entitled "Droplet Microreactor," published on May 29, 2008; Adachi et al., U.S. Patent Pub. No. 20090321262, entitled "Liquid Transfer Device," published on December 31, 2009; Roux et al., U.S. Patent Pub. No. 20050179746, entitled "Device for Controlling the Displacement of a Drop Between two or Several Solid Substrates," published on August 18, 2005; Dhindsa et al., "Virtual Electrowetting Channels: Electronic Liquid Transport with Continuous
Channel Functionality," Lab Chip, 10:832-836 (2010); the entire disclosures of which are incorporated herein by reference, along with their priority documents. Certain droplet actuators will include one or more substrates arranged with a gap therebetween and electrodes associated with (e.g., layered on, attached to, and/or embedded in) the one or more substrates and arranged to conduct one or more droplet operations. For example, certain droplet actuators will include a base (or bottom) substrate, droplet operations electrodes associated with the substrate, one or more dielectric layers atop the substrate and/or electrodes, and optionally one or more hydrophobic layers atop the substrate, dielectric layers and/or the electrodes forming a droplet operations surface. A top substrate may also be provided, which is separated from the droplet operations surface by a gap, commonly referred to as a droplet operations gap. Various electrode arrangements on the top and/or bottom substrates are discussed in the above-referenced patents and applications and certain novel electrode arrangements are discussed in the description of the invention. During droplet operations it is preferred that droplets remain in continuous contact or frequent contact with a ground or reference electrode. A ground or reference electrode may be associated with the top substrate facing the gap, the bottom substrate facing the gap, in the gap. Where electrodes are provided on both substrates, electrical contacts for coupling the electrodes to a droplet actuator instrument for controlling or monitoring the electrodes may be associated with one or both plates. In some cases, electrodes on one substrate are electrically coupled to the other substrate so that only one substrate is in contact with the droplet actuator. In one embodiment, a conductive material (e.g., an epoxy, such as MASTER BOND™ Polymer System EP79, available from Master Bond, Inc., Hackensack, NJ) provides the electrical connection between electrodes on one substrate and electrical paths on the other substrates, e.g., a ground electrode on a top substrate may be coupled to an electrical path on a bottom substrate by such a conductive material. Where multiple substrates are used, a spacer may be provided between the substrates to determine the height of the gap therebetween and define dispensing reservoirs. The spacer height may, for example, be from about 5 μιη to about 600 μιη, or about 100 μιη to about 400 μιη, or about 200 μιη to about 350 μιη, or about 250 μιη to about 300 μιη, or about 275 μιη. The spacer may, for example, be formed of a layer of projections form the top or bottom substrates, and/or a material inserted between the top and bottom substrates. One or more openings may be provided in the one or more substrates for forming a fluid path through which liquid may be delivered into the droplet operations gap. The one or more openings may in some cases be aligned for interaction with one or more electrodes, e.g., aligned such that liquid flowed through the opening will come into sufficient proximity with one or more droplet operations electrodes to permit a droplet operation to be effected by the droplet operations electrodes using the liquid. The base (or bottom) and top substrates may in some cases be formed as one integral component. One or more reference electrodes may be provided on the base (or bottom) and/or top substrates and/or in the gap. Examples of reference electrode arrangements are provided in the above referenced patents and patent applications. In various embodiments, the manipulation of droplets by a droplet actuator may be electrode mediated, e.g., electrowetting mediated or di electrophoresis mediated or Coulombic force mediated. Examples of other techniques for controlling droplet operations that may be used in the droplet actuators of the invention include using devices that induce hydrodynamic fluidic pressure, such as those that operate on the basis of mechanical principles (e.g. external syringe pumps, pneumatic membrane pumps, vibrating membrane pumps, vacuum devices, centrifugal forces, piezoelectric/ultrasonic pumps and acoustic forces); electrical or magnetic principles (e.g. electroosmotic flow, electrokinetic pumps, ferrofluidic plugs, electrohydrodynamic pumps, attraction or repulsion using magnetic forces and magnetohydrodynamic pumps); thermodynamic principles (e.g. gas bubble generation/phase-change-induced volume expansion); other kinds of surface-wetting principles (e.g. electrowetting, and optoelectrowetting, as well as chemically, thermally, structurally and radioactively induced surface-tension gradients); gravity; surface tension (e.g., capillary action); electrostatic forces (e.g., electroosmotic flow); centrifugal flow (substrate disposed on a compact disc and rotated); magnetic forces (e.g., oscillating ions causes flow); magnetohydrodynamic forces; and vacuum or pressure differential. In certain embodiments, combinations of two or more of the foregoing techniques may be employed to conduct a droplet operation in a droplet actuator of the invention. Similarly, one or more of the foregoing may be used to deliver liquid into a droplet operations gap, e.g., from a reservoir in another device or from an external reservoir of the droplet actuator (e.g., a reservoir associated with a droplet actuator substrate and a fluid path from the reservoir into the droplet operations gap). Droplet operations surfaces of certain droplet actuators of the invention may be made from hydrophobic materials or may be coated or treated to make them hydrophobic. For example, in some cases some portion or all of the droplet operations surfaces may be derivatized with low surface-energy materials or chemistries, e.g., by deposition or using in situ synthesis using compounds such as poly- or per-fluorinated compounds in solution or polymerizable monomers. Examples include TEFLON® AF
(available from DuPont, Wilmington, DE), members of the cytop family of materials, coatings in the FLUOROPEL® family of hydrophobic and superhydrophobic coatings (available from Cytonix Corporation, Beltsville, MD), silane coatings, fluorosilane coatings, hydrophobic phosphonate derivatives (e.g.., those sold by Aculon, Inc), and NOVEC™ electronic coatings (available from 3M Company, St. Paul, MN), and other fluorinated monomers for plasma-enhanced chemical vapor deposition (PECVD). In some cases, the droplet operations surface may include a hydrophobic coating having a thickness ranging from about 10 nm to about 1,000 nm. Moreover, in some embodiments, the top substrate of the droplet actuator includes an electrically conducting organic polymer, which is then coated with a hydrophobic coating or otherwise treated to make the droplet operations surface hydrophobic. For example, the electrically conducting organic polymer that is deposited onto a plastic substrate may be poly(3,4-ethylenedioxythiophene) poly(styrenesulfonate) (PEDOT:PSS). Other examples of electrically conducting organic polymers and alternative conductive layers are described in Pollack et al., International Patent Application No. PCT/US2010/040705, entitled "Droplet Actuator Devices and Methods," the entire disclosure of which is incorporated herein by reference. One or both substrates may be fabricated using a printed circuit board (PCB), glass, indium tin oxide (ITO)-coated glass, and/or semiconductor materials as the substrate. When the substrate is ITO-coated glass, the ITO coating is preferably a thickness in the range of about 20 to about 200 nm, preferably about 50 to about 150 nm, or about 75 to about 125 nm, or about 100 nm. In some cases, the top and/or bottom substrate includes a PCB substrate that is coated with a dielectric, such as a polyimide dielectric, which may in some cases also be coated or otherwise treated to make the droplet operations surface hydrophobic. When the substrate includes a PCB, the following materials are examples of suitable materials: MITSUI™ BN-300 (available from MITSUI Chemicals America, Inc., San Jose CA); ARLON™ 1 IN (available from Arlon, Inc, Santa Ana, CA).; NELCO® N4000-6 and N5000-30/32 (available from Park Electrochemical
Corp., Melville, NY); ISOLA™ FR406 (available from Isola Group, Chandler, AZ), especially IS620; fluoropolymer family (suitable for fluorescence detection since it has low background fluorescence); polyimide family; polyester; polyethylene naphthalate; polycarbonate; polyetheretherketone; liquid crystal polymer; cyclo-olefm copolymer (COC); cyclo-olefm polymer (COP); aramid; THERMOUNT® nonwoven aramid reinforcement
(available from DuPont, Wilmington, DE); NOMEX® brand fiber (available from DuPont, Wilmington, DE); and paper. Various materials are also suitable for use as the dielectric component of the substrate. Examples include: vapor deposited dielectric, such as PARYLENE™ C (especially on glass) and PARYLENE™ N (available from Parylene Coating Services, Inc., Katy, TX); TEFLON® AF coatings; cytop; soldermasks, such as liquid photoimageable soldermasks (e.g., on PCB) like TAIYO™ PSR4000 series, TAIYO™ PSR and AUS series (available from Taiyo America, Inc. Carson City, NV) (good thermal characteristics for applications involving thermal control), and PROBIMER™ 8165 (good thermal characteristics for applications involving thermal control (available from Huntsman Advanced Materials Americas Inc., Los Angeles, CA); dry film soldermask, such as those in the VACREL® dry film soldermask line (available from DuPont, Wilmington, DE); film dielectrics, such as polyimide film (e.g., KAPTON® polyimide film, available from DuPont, Wilmington, DE), polyethylene, and fluoropolymers (e.g., FEP), polytetrafluoroethylene; polyester; polyethylene naphthalate; cyclo-olefm copolymer (COC); cyclo-olefm polymer (COP); any other PCB substrate material listed above; black matrix resin; and polypropylene. Droplet transport voltage and frequency may be selected for performance with reagents used in specific assay protocols. Design parameters may be varied, e.g., number and placement of on-actuator reservoirs, number of independent electrode connections, size (volume) of different reservoirs, placement of magnets ead washing zones, electrode size, inter-electrode pitch, and gap height (between top and bottom substrates) may be varied for use with specific reagents, protocols, droplet volumes, etc. In some cases, a substrate of the invention may derivatized with low surface-energy materials or chemistries, e.g., using deposition or in situ synthesis using poly- or per-fluorinated compounds in solution or polymerizable monomers. Examples include TEFLON® AF coatings and FLUOROPEL® coatings for dip or spray coating, and other fluorinated monomers for plasma-enhanced chemical vapor deposition (PECVD). Additionally, in some cases, some portion or all of the droplet operations surface may be coated with a substance for reducing background noise, such as background fluorescence from a PCB substrate. For example, the noise-reducing coating may include a black matrix resin, such as the black matrix resins available from Toray industries, Inc., Japan. Electrodes of a droplet actuator are typically controlled by a controller or a processor, which is itself provided as part of a system, which may include processing functions as well as data and software storage and input and output capabilities. Reagents may be provided on the droplet actuator in the droplet operations gap or in a reservoir fluidly coupled to the droplet operations gap. The reagents may be in liquid form, e.g., droplets, or they may be provided in a reconstitutable form in the droplet operations gap or in a reservoir fluidly coupled to the droplet operations gap. Reconstitutable reagents may typically be combined with liquids for reconstitution. An example of reconstitutable reagents suitable for use with the invention includes those described in Meathrel, et al., U.S. Patent 7,727,466, entitled "Disintegratable films for diagnostic devices," granted on June 1, 2010.
"Droplet operation" means any manipulation of a droplet on a droplet actuator. A droplet operation may, for example, include: loading a droplet into the droplet actuator; dispensing one or more droplets from a source droplet; splitting, separating or dividing a droplet into two or more droplets; transporting a droplet from one location to another in any direction; merging or combining two or more droplets into a single droplet; diluting a droplet; mixing a droplet; agitating a droplet; deforming a droplet; retaining a droplet in position; incubating a droplet; heating a droplet; vaporizing a droplet; cooling a droplet; disposing of a droplet; transporting a droplet out of a droplet actuator; other droplet operations described herein; and/or any combination of the foregoing. The terms "merge," "merging," "combine," "combining" and the like are used to describe the creation of one droplet from two or more droplets. It should be understood that when such a term is used in reference to two or more droplets, any combination of droplet operations that are sufficient to result in the combination of the two or more droplets into one droplet may be used. For example, "merging droplet A with droplet B," can be achieved by transporting droplet A into contact with a stationary droplet B, transporting droplet B into contact with a stationary droplet A, or transporting droplets A and B into contact with each other. The terms "splitting," "separating" and "dividing" are not intended to imply any particular outcome with respect to volume of the resulting droplets (i.e., the volume of the resulting droplets can be the same or different) or number of resulting droplets (the number of resulting droplets may be 2, 3, 4, 5 or more). The term "mixing" refers to droplet operations which result in more homogenous distribution of one or more components within a droplet. Examples of "loading" droplet operations include microdialysis loading, pressure assisted loading, robotic loading, passive loading, and pipette loading. Droplet operations may be electrode-mediated. In some cases, droplet operations are further facilitated by the use of hydrophilic and/or hydrophobic regions on surfaces and/or by physical obstacles. For examples of droplet operations, see the patents and patent applications cited above under the definition of "droplet actuator." Impedance or capacitance sensing or imaging techniques may sometimes be used to determine or confirm the outcome of a droplet operation. Examples of such techniques are described in Stunner et al., International Patent Pub. No. WO/2008/101194, entitled "Capacitance Detection in a Droplet Actuator," published on August 21, 2008, the entire disclosure of which is incorporated herein by reference. Generally speaking, the sensing or imaging techniques may be used to confirm the presence or absence of a droplet at a specific electrode. For example, the presence of a dispensed droplet at the destination electrode following a droplet dispensing operation confirms that the droplet dispensing operation was effective. Similarly, the presence of a droplet at a detection spot at an appropriate step in an assay protocol may confirm that a previous set of droplet operations has successfully produced a droplet for detection. Droplet transport time can be quite fast. For example, in various embodiments, transport of a droplet from one electrode to the next may exceed about 1 sec, or about 0.1 sec, or about 0.01 sec, or about 0.001 sec. In one embodiment, the electrode is operated in AC mode but is switched to DC mode for imaging. It is helpful for conducting droplet operations for the footprint area of droplet to be similar to electrowetting area; in other words, lx-, 2x- 3x-droplets are usefully controlled operated using 1, 2, and 3 electrodes, respectively. If the droplet footprint is greater than the number of electrodes available for conducting a droplet operation at a given time, the difference between the droplet size and the number of electrodes should typically not be greater than 1; in other words, a 2x droplet is usefully controlled using 1 electrode and a 3x droplet is usefully controlled using 2 electrodes. When droplets include beads, it is useful for droplet size to be equal to the number of electrodes controlling the droplet, e.g., transporting the droplet.
"Filler fluid" means a fluid associated with a droplet operations substrate of a droplet actuator, which fluid is sufficiently immiscible with a droplet phase to render the droplet phase subject to electrode -mediated droplet operations. For example, the gap of a droplet actuator is typically filled with a filler fluid. The filler fluid may, for example, be a low- viscosity oil, such as silicone oil or hexadecane filler fluid. The filler fluid may fill the entire gap of the droplet actuator or may coat one or more surfaces of the droplet actuator. Filler fluids may be conductive or non-conductive. Filler fluids may, for example, be doped with surfactants or other additives. For example, additives may be selected to improve droplet operations and/or reduce loss of reagent or target substances from droplets, formation of microdroplets, cross contamination between droplets, contamination of droplet actuator surfaces, degradation of droplet actuator materials, etc. Composition of the filler fluid, including surfactant doping, may be selected for performance with reagents used in the specific assay protocols and effective interaction or non-interaction with droplet actuator materials. Examples of filler fluids and filler fluid formulations suitable for use with the invention are provided in Srinivasan et al, International Patent Pub. Nos. WO/2010/027894, entitled "Droplet Actuators, Modified Fluids and Methods," published on March 11, 2010, and WO/2009/021173, entitled "Use of Additives for Enhancing Droplet Operations," published on February 12, 2009; Sista et al., International Patent Pub. No. WO/2008/098236, entitled "Droplet Actuator Devices and Methods Employing Magnetic Beads," published on August 14, 2008; and Monroe et al., U.S. Patent Publication No. 20080283414, entitled
"Electrowetting Devices," filed on May 17, 2007; the entire disclosures of which are incorporated herein by reference, as well as the other patents and patent applications cited herein. "Immobilize" with respect to magnetically responsive beads, means that the beads are substantially restrained in position in a droplet or in filler fluid on a droplet actuator. For example, in one embodiment, immobilized beads are sufficiently restrained in position in a droplet to permit execution of a droplet splitting operation, yielding one droplet with substantially all of the beads and one droplet substantially lacking in the beads.
"Magnetically responsive" means responsive to a magnetic field. "Magnetically responsive beads" include or are composed of magnetically responsive materials. Examples of magnetically responsive materials include paramagnetic materials, ferromagnetic materials, ferrimagnetic materials, and metamagnetic materials. Examples of suitable paramagnetic materials include iron, nickel, and cobalt, as well as metal oxides, such as Fe304, BaFei2Oi9,
CoO, NiO, Mn203, Cr203, and CoMnP.
"Reservoir" means an enclosure or partial enclosure configured for holding, storing, or supplying liquid. A droplet actuator system of the invention may include on-cartridge reservoirs and/or off-cartridge reservoirs. On-cartridge reservoirs may be (1) on-actuator reservoirs, which are reservoirs in the droplet operations gap or on the droplet operations surface; (2) off-actuator reservoirs, which are reservoirs on the droplet actuator cartridge, but outside the droplet operations gap, and not in contact with the droplet operations surface; or (3) hybrid reservoirs which have on-actuator regions and off-actuator regions. An example of an off-actuator reservoir is a reservoir in the top substrate. An off-actuator reservoir is typically in fluid communication with an opening or fluid path arranged for flowing liquid from the off-actuator reservoir into the droplet operations gap, such as into an on-actuator reservoir. An off-cartridge reservoir may be a reservoir that is not part of the droplet actuator cartridge at all, but which flows liquid to some portion of the droplet actuator cartridge. For example, an off-cartridge reservoir may be part of a system or docking station to which the droplet actuator cartridge is coupled during operation. Similarly, an off-cartridge reservoir may be a reagent storage container or syringe which is used to force fluid into an on-cartridge reservoir or into a droplet operations gap. A system using an off-cartridge reservoir will typically include a fluid passage means whereby liquid may be transferred from the off- cartridge reservoir into an on-cartridge reservoir or into a droplet operations gap. "Transporting into the magnetic field of a magnet," "transporting towards a magnet," and the like, as used herein to refer to droplets and/or magnetically responsive beads within droplets, is intended to refer to transporting into a region of a magnetic field capable of substantially attracting magnetically responsive beads in the droplet. Similarly, "transporting away from a magnet or magnetic field," "transporting out of the magnetic field of a magnet," and the like, as used herein to refer to droplets and/or magnetically responsive beads within droplets, is intended to refer to transporting away from a region of a magnetic field capable of substantially attracting magnetically responsive beads in the droplet, whether or not the droplet or magnetically responsive beads is completely removed from the magnetic field. It will be appreciated that in any of such cases described herein, the droplet may be transported towards or away from the desired region of the magnetic field, and/or the desired region of the magnetic field may be moved towards or away from the droplet. Reference to an electrode, a droplet, or magnetically responsive beads being "within" or "in" a magnetic field, or the like, is intended to describe a situation in which the electrode is situated in a manner which permits the electrode to transport a droplet into and/or away from a desired region of a magnetic field, or the droplet or magnetically responsive beads is/are situated in a desired region of the magnetic field, in each case where the magnetic field in the desired region is capable of substantially attracting any magnetically responsive beads in the droplet. Similarly, reference to an electrode, a droplet, or magnetically responsive beads being
"outside of or "away from" a magnetic field, and the like, is intended to describe a situation in which the electrode is situated in a manner which permits the electrode to transport a droplet away from a certain region of a magnetic field, or the droplet or magnetically responsive beads is/are situated away from a certain region of the magnetic field, in each case where the magnetic field in such region is not capable of substantially attracting any magnetically responsive beads in the droplet or in which any remaining attraction does not eliminate the effectiveness of droplet operations conducted in the region. In various aspects of the invention, a system, a droplet actuator, or another component of a system may include a magnet, such as one or more permanent magnets (e.g., a single cylindrical or bar magnet or an array of such magnets, such as a Halbach array) or an electromagnet or array of electromagnets, to form a magnetic field for interacting with magnetically responsive beads or other components on chip. Such interactions may, for example, include substantially immobilizing or restraining movement or flow of magnetically responsive beads during storage or in a droplet during a droplet operation or pulling magnetically responsive beads out of a droplet.
"Washing" with respect to washing a bead means reducing the amount and/or concentration of one or more substances in contact with the bead or exposed to the bead from a droplet in contact with the bead. The reduction in the amount and/or concentration of the substance may be partial, substantially complete, or even complete. The substance may be any of a wide variety of substances; examples include target substances for further analysis, and unwanted substances, such as components of a sample, contaminants, and/or excess reagent. In some embodiments, a washing operation begins with a starting droplet in contact with a magnetically responsive bead, where the droplet includes an initial amount and initial concentration of a substance. The washing operation may proceed using a variety of droplet operations. The washing operation may yield a droplet including the magnetically responsive bead, where the droplet has a total amount and/or concentration of the substance which is less than the initial amount and/or concentration of the substance. Examples of suitable washing techniques are described in Pamula et al., U.S. Patent 7,439,014, entitled "Droplet-Based Surface Modification and Washing," granted on October 21, 2008, the entire disclosure of which is incorporated herein by reference.
The terms "top," "bottom," "over," "under," and "on" are used throughout the description with reference to the relative positions of components of the droplet actuator, such as relative positions of top and bottom substrates of the droplet actuator. It will be appreciated that the droplet actuator is functional regardless of its orientation in space.
When a liquid in any form (e.g., a droplet or a continuous body, whether moving or stationary) is described as being "on", "at", or "over" an electrode, array, matrix or surface, such liquid could be either in direct contact with the electrode/array/matrix/surface, or could be in contact with one or more layers or films that are interposed between the liquid and the electrode/array /matrix/surface.
When a droplet is described as being "on" or "loaded on" a droplet actuator, it should be understood that the droplet is arranged on the droplet actuator in a manner which facilitates using the droplet actuator to conduct one or more droplet operations on the droplet, the droplet is arranged on the droplet actuator in a manner which facilitates sensing of a property of or a signal from the droplet, and/or the droplet has been subjected to a droplet operation on the droplet actuator.
Brief Description of the Drawings
Figure 1 illustrates a top view and a side view of a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators;
Figure 2 shows a plot of an example of flow rates vs. height H of the gravity-driven constant pressure head dispenser; Figures 3A through 3C illustrate examples of fluid delivery methods using the gravity-driven constant pressure head dispenser;
Figures 4 and 5 illustrate side views of the gravity-driven constant pressure head dispenser and a process of installing the dispenser into a droplet actuator; and
Figure 6 illustrates a functional block diagram of an example of a microfluidics system that includes a droplet actuator.
Description
An aspect of an embodiment of the invention may include an apparatus for delivering fluid to a microfluidic device having a vessel, an inlet in fluid communication with the vessel, an outlet in fluid communication with the vessel; and an outlet that is configured to deliver one or more volumes of fluid to one or more microfluidics devices.
An aspect of an embodiment of the invention may include an apparatus having an outlet that delivers volumes of fluid to a microfluidics device having a droplet actuator.
An aspect of an embodiment of the invention may include an apparatus having a vessel that may be cylindrical.
An aspect of an embodiment of the invention may include an apparatus having an outlet that may be in fluid communication with the inlet.
An aspect of an embodiment of the invention may include an apparatus having a first end of the vessel that may be enclosed.
An aspect of an embodiment of the invention may include an apparatus having a second end of the vessel that may be funnel shaped.
An aspect of an embodiment of the invention may include an apparatus having an outlet that may be a hole feeding a tube.
An aspect of an embodiment of the invention may include an apparatus having a vessel that may be in fluid communication with a seal. An aspect of an embodiment of the invention may include an apparatus having a seal that may be configured to be opened by one or more of shearing, ripping, puncturing, thermal, electrical and mechanical.
An aspect of an embodiment of the invention may include an apparatus where the fluid may be delivered to one or more of an off-actuator reservoir, an on-actuator reservoir, directly onto a droplet operations surface and directly into a droplet operations gap of a droplet actuator.
An aspect of an embodiment of the invention may include an apparatus having an off- cartridge reservoir that may be one or more of a reagent storage reservoir or a syringe.
An aspect of an embodiment of the invention may include an off-cartridge reservoir that may be one or more of a pipette tip or a well of a multi-well plate.
An aspect of an embodiment of the invention may include an apparatus where the vessel may also include one or more of an off-cartridge reservoir and an on-cartridge reservoir.
An aspect of an embodiment of the invention may include an apparatus where a seal is configured to be opened during rotational or translational insertion of a dispenser into a receptacle.
An aspect of an embodiment of the invention may include an apparatus wherein the top substrate material is glass, injection-molded plastic, or silicon.
An aspect of an embodiment of the invention may include a fluid delivery method including providing a dispenser having at least one outlet in fluid communication with a reservoir wherein the dispenser is configured to communicate a fluid to a microfluidics device, and delivering a volume of fluid stored in the vessel from the outlet to the microfluidics device
An aspect of an embodiment of the invention may include dispensing the volume of fluid to a droplet actuator.
An aspect of an embodiment of the invention may include dispensing the volume of fluid periodically or continuously.
An aspect of an embodiment of the invention may include dispensing in drops, dispensing the volume of fluid in bulk, or both. An aspect of an embodiment of the invention may include dispensing one or more volumes of fluid from above the oil interface, dispensing one or more volumes of fluid from below the oil interface, or both.
An aspect of an embodiment of the invention may include a system having a dispenser comprising a vessel connected to an outlet and an inlet, a droplet actuator comprising a reservoir electrode in fluid communication with the outlet, and an electrical circuit for controlling the system components electrically connected to the reservoir electrode.
An aspect of an embodiment of the invention may include a system where the top substrate may have an insertion slot.
An aspect of an embodiment of the invention may include a system where the bottom substrate may have a printed circuit board.
An aspect of an embodiment of the invention may include a system that may have an input port integrated into the top substrate.
An aspect of an embodiment of the invention may include a system that may have a gravity- driven constant pressure head dispenser.
An aspect of an embodiment of the invention may include a system that may have a droplet actuator.
An additional aspect of an embodiment of the invention may include a system that may have a top reservoir electrode that is fluidly connected to microfluidic device comprising a droplet actuator.
An aspect of an embodiment of the invention may include a system including a top reservoir electrode that is fluidly connected to microfluidic device comprising a droplet actuator
An additional aspect of an embodiment of the invention may include a method of dispensing one or more materials between a dispenser and one or more reservoir electrodes on the surface of a bottom substrate.
A further aspect includes dispensing directly into a droplet operations gap of a droplet actuator. A further aspect includes dispensing directly onto a droplet operations surface of a droplet actuator.
The invention is a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators. For example, the gravity-driven dispenser of the invention provides a reagent container that is mounted on the top substrate and delivers fluid at the appropriate rate, without use of pumps. Accordingly, the gravity-driven dispenser is a simple and inexpensive design that has no moving parts. The fluid delivery rate of the gravity-driven dispenser may be set by manipulating the diameter of an inlet, the diameter of an outlet, and the distance between the two. Using the gravity-driven dispenser of the invention, fluid may be delivered into an off-actuator reservoir, an on-actuator reservoir, and/or directly into the droplet operations gap of the droplet actuator. Preferably, the gravity- driven dispenser delivers fluid into an on-actuator reservoir.
Figure 1 illustrates a top view and a side view of a gravity-driven constant pressure head dispenser for delivering large volumes of fluid to droplet actuators. Hereafter the gravity- driven constant pressure head dispenser is referred to as gravity-driven dispenser 100. Gravity-driven dispenser 100 includes a vessel 110, which is sized to hold a certain volume of fluid, such as fluid 116. Vessel 110 may be, for example, a cylinder- shaped tube. One end of vessel 1 10 is enclosed. The opposite end of vessel 110 is funnel-shaped. An outlet 1 12 is provided at the narrow end of the funnel-shaped portion of vessel 1 10. In its simplest form, outlet 1 12 may be a hole or opening. Additionally, outlet 112 may be a hole feeding a tube. Outlet 112 has a certain diameter Dout. An inlet 1 14 is provided along the side of vessel 1 10. In its simplest form, inlet 1 14 may be a hole or opening. Additionally, inlet 1 14 may be a hole feeding a tube. Inlet 114 has a certain diameter Din. There is a certain height H between outlet 112 and inlet 114.
In operation, gravity-driven dispenser 100 is filled with a certain amount of fluid 1 16, such as reagent fluid. Inlet 114 serves as a vent for allowing air to enter vessel 1 10. For example, Figure 1 shows air bubbles 1 18 entering vessel 110 through inlet 1 14. As air bubbles 1 18 displace fluid 116 in vessel 110, droplets 120 of fluid 116 are dispensed from outlet 112.
Primarily, there are two competing pressures in gravity-driven dispenser 100 - (1) hydrostatic pressure Phydmstatic on the fluid inside the main vessel 1 10, which is measured up to inlet 114; and (2) capillary pressures pcapmary at outlet 112. For dispensing to occur, the total pressure gradient in gravity-driven dispenser 100 must be greater than 0. If height H is too small or diameters Dout and Din are too small the capillary pressures ρ will dominate the system, preventing any dispensing. Therefore, aside from the fluid properties, the fluid delivery rate of gravity-driven dispenser 100 may be set by manipulating the diameter Dout of outlet 1 12, the diameter Din of inlet 114, and the height H between outlet 112 and inlet 1 14. Generally, the smaller the diameters Dout and Din the slower the flow rate. The larger the diameters Dout and κ the faster the flow rate.
The operation of gravity-driven dispenser 100 may be according to the following equations.
' total = hydrostatic ~
Figure imgf000021_0001
~ out hydrostatic = PS^ .
where
4 cos <
, and
4r cos Θ
APout =—
out
Table 1 below shows an example flow rates when holding diameter Dout of outlet 112 and diameter Din of inlet 1 14 constant, while varying height H. Additionally, Figure 2 shows a plot 200 of flow rates vs. height H of gravity-driven dispenser 100 according to the information in Table 1.
Table 1 Example flow rates of gravity-driven dispenser 100
Diameter
Diameter Height H Volume Test Average
D0ut Number
Din (mm) (mm) dispensed uL/Drop duration flow rate
(mm) of Drops
(uL) (Sec) (uL/min)
0.51 2.06 8 645 69 9.35 2540 15.24
0.51 2.06 9 1135 1 10 10.32 563 120.96
0.51 2.06 10 1045 102 10.25 773 8 i . i 1
0.51 2.06 10 11 13 1 13 9.85 200 333.90
0.51 2.06 10.5 11 10 120 9.25 11 10 60.00
0.51 2.06 11 1072 96 1 1.17 164 392.20
0.51 2.06 11.5 976 103 9.48 101 579.80
0.51 2.06 14.5 860 83 10.36 65 793.85
0.51 2.06 16.5 760 73 10.41 49 930.61
0.51 2.06 20.5 642 63 10.19 35 1100.57
Referring again to Table 1 and Figure 2, drops do not necessarily dispense at perfect intervals. Instead, they may dispense in clusters of 2-4 drops in between relatively long periods. However, the average drop frequency may remain nearly constant.
Figures 3A through 3D illustrate examples of fluid delivery methods using gravity-driven dispenser 100. Figures 3 A through 3D show gravity-driven dispenser 100 in relation to a droplet actuator 300. Droplet actuator 300 may include a bottom substrate 310 and a top substrate 312 that are separated by a gap 314. Bottom substrate 310 may, for example, be a printed circuit board (PCB). Top substrate 312 may, for example, be formed of glass, injection -molded plastic, and/or silicon. Bottom substrate 310 may include a line, path, and/or array of droplet operations electrodes (not shown). Droplet operations are conducted atop droplet operations electrodes on a droplet operations surface. An input port 316 (i.e., an opening) may be integrated into top substrate 312. A port (e.g., input port 316) is an entrance/exit (opening) to the droplet operations gap. Liquid may flow through the port into any portion of the gap. That could be into a reservoir region of the gap or onto a droplet operations pathway. Gap 314 may be filled with filler fluid 318. Filler fluid 318 may, for example, be a low-viscosity oil, such as silicone oil or hexadecane filler fluid.
In one fluid delivery method and referring to Figure 3 A, gravity-driven dispenser 100 is used to deliver periodically a single drop from above the oil interface. In another fluid delivery method and referring to Figure 3B, gravity-driven dispenser 100 is used to deliver periodically a single drop from below the oil interface. In yet another fluid delivery method and referring to Figure 3C, gravity-driven dispenser 100 is used to deliver fluid 116 in bulk into gap 314 of droplet actuator 300. For example, outlet 112 of gravity-driven dispenser 100 is positioned close enough to the droplet operations surface of bottom substrate 310 such that the drop of fluid 116 never detaches and fluid 116 is delivered almost continuously into gap
314.
Figures 4 and 5 illustrate side views of gravity-driven dispenser 100 and a process of installing the dispenser into a droplet actuator 400. Figures 4 and 5 show gravity-driven dispenser 100 in relation to a droplet actuator 400. Droplet actuator 400 may include a bottom substrate 410 and a top substrate 412 that are separated by a gap 414. Bottom substrate 410 may, for example, be a PCB. Top substrate 412 may, for example, be formed of glass, injection-molded plastic, and/or silicon. A receptacle 416 for receiving gravity-driven dispenser 100 is integrated into top substrate 412. The shape of receptacle 416 substantially corresponds to the shape of gravity-driven dispenser 100. Top substrate 412 also includes an opening (or input port) 418 that substantially aligns with outlet 112 when gravity-driven dispenser 100 is fully installed. Top substrate 412 also includes a vent path 420 that substantially aligns with inlet 114 when gravity-driven dispenser 100 is fully installed.
Bottom substrate 410 may include a line, path, and/or array of droplet operations electrodes (not shown) and/or one or more reservoir electrodes. In one example, bottom substrate 410 includes at least one reservoir electrode 422 that substantially aligns with opening 418 of top substrate 412. Droplet operations are conducted atop droplet operations electrodes on a droplet operations surface.
Figure 4 shows gravity-driven dispenser 100 in position to be installed, but not yet installed in receptacle 416 of droplet actuator 400. Gravity-driven dispenser 100 is filled with fluid 116 and a seal 130 is covering inlet 114 to prevent leakage therethrough. No seal is at outlet 112, but because gravity-driven dispenser 100 is enclosed and currently not vented, no fluid 116 leaks from outlet 112. Figure 5 shows gravity-driven dispenser 100 installed in receptacle 416 of droplet actuator 400. In one example, in the process of sliding gravity-driven dispenser 100 into receptacle 416 of droplet actuator 400, seal 130 may be sheered off, ripped off, and/or punctured, thereby opening inlet 114. Additionally, seal 130 may be opened by any other means. For example, seal 130 may be opened by thermal means, electrical means, and/or mechanical means. As soon as seal 130 is broken, inlet 1 14 is open to vent path 420 and dispensing begins from outlet 1 12 at a specified flow rate.
Systems
Figure 6 illustrates a functional block diagram of an example of a microfluidics system 600 that includes a droplet actuator 605. Digital micro fluidic technology conducts droplet operations on discrete droplets in a droplet actuator, such as droplet actuator 605, by electrical control of their surface tension (electrowetting). The droplets may be sandwiched between two substrates of droplet actuator 605, a bottom substrate and a top substrate separated by a gap. The bottom substrate may, for example, be a PCB with an arrangement of electrically addressable electrodes. The top substrate may, for example, be an injection molded plastic substrate that includes a reference electrode plane made, for example, from conductive ink or indium tin oxide (ITO). The bottom substrate and the top substrate may be coated with a hydrophobic material. The space around the droplets (i.e., the gap between bottom and top substrates) may be filled with an immiscible inert fluid, such as silicone oil, to prevent evaporation of the droplets and to facilitate their transport within the device. Other droplet operations may be effected by varying the patterns of voltage activation; examples include merging, splitting, mixing, and dispensing of droplets.
Droplet actuator 605 may be designed to fit onto an instrument deck (not shown) of microfluidics system 600. The instrument deck may hold droplet actuator 605 and house other droplet actuator features, such as, but not limited to, one or more magnets and one or more heating devices. For example, the instrument deck may house one or more magnets 610, which may be permanent magnets. Optionally, the instrument deck may house one or more electromagnets 615. Magnets 610 and/or electromagnets 615 are positioned in relation to droplet actuator 605 for immobilization of magnetically responsive beads. Optionally, the positions of magnets 610 and/or electromagnets 615 may be controlled by a motor 620.
Additionally, the instrument deck may house one or more heating devices 625 for controlling the temperature within, for example, certain reaction and/or washing zones of droplet actuator 605. In one example, heating devices 625 may be heater bars that are positioned in relation to droplet actuator 605 for providing thermal control thereof.
A controller 630 of micro fluidics system 600 is electrically coupled to various hardware components of the invention, such as droplet actuator 605, electromagnets 615, motor 620, and heating devices 625, as well as to a detector 635, an impedance sensing system 640, and any other input and/or output devices (not shown). Controller 630 controls the overall operation of microfluidics system 600. Controller 630 may, for example, be a general purpose computer, special purpose computer, personal computer, or other programmable data processing apparatus. Controller 630 serves to provide processing capabilities, such as storing, interpreting, and/or executing software instructions, as well as controlling the overall operation of the system. Controller 630 may be configured and programmed to control data and/or power aspects of these devices. For example, in one aspect, with respect to droplet actuator 605, controller 630 controls droplet manipulation by activating/deactivating electrodes.
In one example, detector 635 may be an imaging system that is positioned in relation to droplet actuator 605. In one example, the imaging system may include one or more light- emitting diodes (LEDs) (i.e., an illumination source) and a digital image capture device, such as a charge-coupled device (CCD) camera.
Impedance sensing system 640 may be any circuitry for detecting impedance at a specific electrode of droplet actuator 605. In one example, impedance sensing system 640 may be an impedance spectrometer. Impedance sensing system 640 may be used to monitor the capacitive loading of any electrode, such as any droplet operations electrode, with or without a droplet thereon. For examples of suitable capacitance detection techniques, see Stunner et al., International Patent Publication No. WO/2008/101194, entitled "Capacitance Detection in a Droplet Actuator," published on Aug. 21, 2008; and Kale et al., International Patent Publication No. WO/2002/080822, entitled "System and Method for Dispensing Liquids," published on Oct. 17, 2002; the entire disclosures of which are incorporated herein by reference.
Droplet actuator 605 may include disruption device 645. Disruption device 645 may include any device that promotes disruption (lysis) of materials, such as tissues, cells and spores in a droplet actuator. Disruption device 645 may, for example, be a sonication mechanism, a heating mechanism, a mechanical shearing mechanism, a bead beating mechanism, physical features incorporated into the droplet actuator 605, an electric field generating mechanism, a thermal cycling mechanism, and any combinations thereof. Disruption device 645 may be controlled by controller 630.
It will be appreciated that various aspects of the invention may be embodied as a method, system, computer readable medium, and/or computer program product. Aspects of the invention may take the form of hardware embodiments, software embodiments (including firmware, resident software, micro-code, etc.), or embodiments combining software and hardware aspects that may all generally be referred to herein as a "circuit," "module" or "system." Furthermore, the methods of the invention may take the form of a computer program product on a computer-usable storage medium having computer-usable program code embodied in the medium.
Any suitable computer useable medium may be utilized for software aspects of the invention. The computer-usable or computer-readable medium may be, for example but not limited to, an electronic, magnetic, optical, electromagnetic, infrared, or semiconductor system, apparatus, device, or propagation medium. The computer readable medium may include transitory and/or non-transitory embodiments. More specific examples (a non-exhaustive list) of the computer-readable medium would include some or all of the following: an electrical connection having one or more wires, a portable computer diskette, a hard disk, a random access memory (RAM), a read-only memory (ROM), an erasable programmable read-only memory (EPROM or Flash memory), an optical fiber, a portable compact disc read-only memory (CD-ROM), an optical storage device, a transmission medium such as those supporting the Internet or an intranet, or a magnetic storage device. Note that the computer- usable or computer-readable medium could even be paper or another suitable medium upon which the program is printed, as the program can be electronically captured, via, for instance, optical scanning of the paper or other medium, then compiled, interpreted, or otherwise processed in a suitable manner, if necessary, and then stored in a computer memory. In the context of this document, a computer-usable or computer-readable medium may be any medium that can contain, store, communicate, propagate, or transport the program for use by or in connection with the instruction execution system, apparatus, or device. Program code for carrying out operations of the invention may be written in an object oriented programming language such as Java, Smalltalk, C++ or the like. However, the program code for carrying out operations of the invention may also be written in conventional procedural programming languages, such as the "C" programming language or similar programming languages. The program code may be executed by a processor, application specific integrated circuit (ASIC), or other component that executes the program code. The program code may be simply referred to as a software application that is stored in memory (such as the computer readable medium discussed above). The program code may cause the processor (or any processor-controlled device) to produce a graphical user interface ("GUI").
The graphical user interface may be visually produced on a display device, yet the graphical user interface may also have audible features. The program code, however, may operate in any processor-controlled device, such as a computer, server, personal digital assistant, phone, television, or any processor-controlled device utilizing the processor and/or a digital signal processor.
The program code may locally and/or remotely execute. The program code, for example, may be entirely or partially stored in local memory of the processor-controlled device. The program code, however, may also be at least partially remotely stored, accessed, and downloaded to the processor-controlled device. A user's computer, for example, may entirely execute the program code or only partly execute the program code. The program code may be a stand-alone software package that is at least partly on the user's computer and/or partly executed on a remote computer or entirely on a remote computer or server. In the latter scenario, the remote computer may be connected to the user's computer through a communications network. The invention may be applied regardless of networking environment. The communications network may be a cable network operating in the radio-frequency domain and/or the Internet Protocol (IP) domain. The communications network, however, may also include a distributed computing network, such as the Internet (sometimes alternatively known as the "World Wide Web"), an intranet, a local-area network (LAN), and/or a wide-area network (WAN). The communications network may include coaxial cables, copper wires, fiber optic lines, and/or hybrid- coaxial lines. The communications network may even include wireless portions utilizing any portion of the electromagnetic spectrum and any signaling standard (such as the IEEE 802 family of standards, GSM/CDMA/TDMA or any cellular standard, and/or the ISM band). The communications network may even include powerline portions, in which signals are communicated via electrical wiring. The invention may be applied to any wireless/wireline communications network, regardless of physical componentry, physical configuration, or communications standard(s). Certain aspects of invention are described with reference to various methods and method steps. It will be understood that each method step can be implemented by the program code and/or by machine instructions. The program code and/or the machine instructions may create means for implementing the functions/acts specified in the methods.
The program code may also be stored in a computer-readable memory that can direct the processor, computer, or other programmable data processing apparatus to function in a particular manner, such that the program code stored in the computer-readable memory produce or transform an article of manufacture including instruction means which implement various aspects of the method steps.
The program code may also be loaded onto a computer or other programmable data processing apparatus to cause a series of operational steps to be performed to produce a processor/computer implemented process such that the program code provides steps for implementing various functions/acts specified in the methods of the invention.
Concluding Remarks
The foregoing detailed description of embodiments refers to the accompanying drawings, which illustrate specific embodiments of the invention. Other embodiments having different structures and operations do not depart from the scope of the present invention. The term "the invention" or the like is used with reference to certain specific examples of the many alternative aspects or embodiments of the applicants' invention set forth in this specification, and neither its use nor its absence is intended to limit the scope of the applicants' invention or the scope of the claims. This specification is divided into sections for the convenience of the reader only. Headings should not be construed as limiting of the scope of the invention. The definitions are intended as a part of the description of the invention. It will be understood that various details of the present invention may be changed without departing from the scope of the present invention. Furthermore, the foregoing description is for the purpose of illustration only, and not for the purpose of limitation.

Claims

The Claims
We claim:
1. An apparatus for delivering fluid to a microfluidic device, comprising: a vessel;
an inlet in fluid communication with the vessel;
an outlet in fluid communication with the vessel; and
wherein the outlet is configured to deliver one or more volumes of fluid to one or more microfluidics devices.
2. The apparatus according to claim 1, wherein the outlet delivers volumes of fluid to a microfluidics device having a droplet actuator.
3. The apparatus according to claim 1, wherein the vessel is cylindrical.
4. The apparatus according to claim 1, wherein the outlet is in fluid communication with the inlet.
5. The apparatus according to claim 1, wherein a first end of the vessel is enclosed.
6. The apparatus according to claim 1, wherein a second end of the vessel is funnel shaped.
7 The apparatus according to claim 1 , wherein the outlet is a hole feeding a tube.
8. The apparatus according to claim 1, wherein the vessel is in fluid communication with a seal.
9. The apparatus according to claim 1, wherein the seal is configured to be opened by a means selected from the group consisting of shearing, ripping, puncturing, thermal, electrical and mechanical.
10. The apparatus according to any of claims 1-29, wherein the fluid is delivered to one or more of an off-actuator reservoir, an on-actuator reservoir, directly onto a droplet operations surface and directly into a droplet operations gap of a droplet actuator.
11. The apparatus according any of claims 1-15, wherein the off-cartridge reservoir further comprises one of a reagent storage reservoir or a syringe.
12. The apparatus according to claim 1, wherein the off-cartridge reservoir further comprises one of a pipette tip or a well of a multi-well plate.
13. The apparatus according to claim 1, wherein the vessel further comprises a member selected from the group consisting of an off-cartridge reservoir and an on-cartridge reservoir.
14. The apparatus according to claim 1, wherein a seal is configured to be opened during rotational or translational insertion of a dispenser into a receptacle .
15. The apparatus according to claim 1, wherein the top substrate material is glass, injection-molded plastic, or silicon.
16. A fluid delivery method, comprising: providing a dispenser having at least one outlet in fluid communication with a reservoir wherein the dispenser is configured to communicate a fluid to a microfiuidics device; and
delivering a volume of fluid stored in the vessel from the outlet to the microfiuidics device
17. The method according to claim 15, further comprising dispensing the volume of fluid to a droplet actuator.
18. The method according to claim 15, further comprising dispensing the volume of fluid periodically or continuously.
18. The method according to claim 15, wherein the dispensing is selected from the group consisting of dispensing the volume of fluid in drops and dispensing the volume of fluid in bulk.
20. The method according to claim 15, wherein the dispensing is selected from the group consisting of dispensing the volume of fluid from above the oil interface and dispensing the volume of fluid from below the oil interface.
21. A system comprising :
a dispenser comprising a vessel, connected to an outlet, and an inlet; a droplet actuator comprising a reservoir electrode in fluid communication with the outlet; and
an electrical circuit for controlling said system components electrically connected to the reservoir electrode.
22. The system according to claim 20, wherein the top substrate further comprises an insertion slot.
23. The system according to claim 20, wherein the bottom substrate further comprises a printed circuit board.
24. The system according to claim 20, further comprising an input port integrated into the top substrate.
25. The system according to claim 20, wherein the dispenser is a gravity-driven constant pressure head dispenser.
25. The system according to claim 20, further comprising a droplet actuator.
26. The system according to claim 20, wherein the dispenser is a gravity-driven constant pressure head dispenser.
28. The system according to claim 20, wherein the top reservoir electrode is fluidly connected to microfluidic device comprising a droplet actuator.
29. The system according to claim 20, wherein the top a reservoir electrode is fluidly connected to microfluidic device comprising a droplet actuator.
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