JP5320692B2 - Yeast and method for producing L-lactic acid - Google Patents

Abstract

<P>PROBLEM TO BE SOLVED: To provide L-1dh gene-transferred yeast producing L-lactic acid in higher yield relative to saccharide than conventional bovine-derived L-1dh gene-transferred yeast, and to provide a method for producing L-lactic acid comprising culturing the above yeast. <P>SOLUTION: L-lactic acid can be produced in higher yield relative to saccharide than ever by culturing frog-derived L-1dh gene-transferred yeast. <P>COPYRIGHT: (C)2008,JPO&amp;INPIT

Description

  The present invention relates to a yeast into which a gene encoding L-lactate dehydrogenase has been introduced and a method for producing L-lactic acid comprising culturing the yeast.

  Recently, attention has been focused on polymers made from plant materials for the establishment of a resource recycling society. Among them, it has become clear that polylactic acid (hereinafter sometimes abbreviated as PLA) has excellent properties as a plant raw material polymer.

  Lactic acid, which is a raw material for PLA, has been conventionally produced by culturing microorganisms collectively called so-called lactic acid bacteria represented by the genus Lactobacillus and the genus Lactococcus. These lactic acid bacteria are excellent in the yield of lactic acid from sugar, but have low resistance to acid. Therefore, in order to accumulate a large amount of lactic acid, which is an acidic substance, calcium carbonate, ammonium hydroxide, or hydroxide Cultivation must be performed while neutralizing with an alkali such as sodium.

  However, in this means, a lactate such as sodium lactate or calcium lactate is generated by the neutralization operation with an alkali, so that an operation for returning the lactate to lactic acid is necessary in the subsequent purification process, and the treatment is costly. .

  In order to reduce the neutralization cost, attempts to produce lactic acid in an acid-resistant yeast have been reported (Patent Documents 1 to 5, Non-Patent Documents 1 to 3). Since yeast originally has no ability to produce lactic acid, in order to enable lactic acid production by yeast, a gene encoding L-lactic acid dehydrogenase (hereinafter referred to as L-lactic acid dehydrogenase), which is an enzyme that converts pyruvate into L-lactic acid. -May be abbreviated as ldh gene)) must be introduced into yeast using genetic recombination techniques.

As L-ldh genes to be introduced into yeast, bovine-derived L-ldh genes have been studied (Patent Document 3, Patent Document 5 and Non-Patent Documents 1 to 3), and from L-ldh genes derived from lactic acid bacteria. Are also reported to be suitable (Non-Patent Document 3).
JP 2001-204464 A JP 2001-204468 A Special table 2001-51658 gazette JP 2003-93060 A JP 2003-259878 A Danilo Porro et al: “Biotechnol.Prog”, 11: p294-298 (1995) Danilo Porro et al .: "Applied and Environmental Microbiology", 65 (9): p4211-4215 (1999) Satoshi Saitoh et al .: "Applied and Environmental Microbiology", 71 (5): p2789-2792 (2005)

  In the production of L-lactic acid by culturing a yeast introduced with a conventional bovine-derived L-ldh gene, for example, the conversion efficiency from a raw sugar such as glucose to L-lactic acid, for example, the yield relative to sugar, In order to be able to produce L-lactic acid at a low cost, it was necessary to increase the yield relative to sugar.

In order to solve the above-mentioned problems, the present inventors have intensively studied. As a result, by culturing yeast introduced with a gene encoding L-lactate dehydrogenase derived from Xenopus laevis , The inventors have found that L-lactic acid can be produced at a higher sugar yield than culturing yeast in which a gene encoding a bovine-derived L-lactic acid dehydrogenase has been introduced, and the present invention has been completed.

That is, the present invention provides a yeast into which a gene encoding L-lactate dehydrogenase derived from Xenopus laevis has been introduced . Ze Nopusu-Rebisu (Xenopus laevis) gene encoding the origin of L- lactate dehydrogenase has been introduced yeast is preferably a yeast gene having a nucleic acid sequence shown in SEQ ID NO: 1 has been introduced.

According to another preferred embodiment of the present invention, the yeast introduced with a gene encoding L-lactate dehydrogenase derived from Xenopus laevis is a yeast belonging to the genus Saccharomyces, more preferably. Is Saccharomyces cerevisiae.

According to another preferred embodiment of the present invention, a gene encoding L-lactate dehydrogenase derived from Xenopus laevis is located downstream of the pyruvate decarboxylase 1 gene (PDC1 gene) promoter on the chromosome. Yeast introduced in an expressible state.

The present invention also provides a method for producing L-lactic acid, comprising culturing yeast introduced with the L-lactic acid dehydrogenase derived from Xenopus laevis .

  According to the present invention, a yeast into which a gene encoding a conventional bovine-derived L-lactate dehydrogenase has been introduced by culturing a yeast into which a gene encoding a frog-derived L-lactate dehydrogenase has been introduced. L-lactic acid can be produced with a higher yield to sugar than by culturing the.

  L-lactic acid can be produced at a higher sugar yield by improving the yeast introduced with the frog-derived L-ldh gene of the present invention by a known method and culturing the yeast.

  The present invention is a yeast into which a gene encoding a frog-derived L-lactate dehydrogenase (L-ldh gene) has been introduced.

  In the present invention, L-ldh gene means L-lactic acid dehydrogenation having an activity of converting reduced nicotinamide adenine dinucleotide (NADH) and pyruvate into L-lactic acid and oxidized nicotinamide adenine dinucleotide (NAD +). A gene encoding an enzyme.

The L-ldh gene derived from Xenopus laevis used in the present invention is preferably an L-ldh gene having the nucleic acid sequence shown in SEQ ID NO: 1.

The L-ldh gene derived from Xenopus laevis used in the present invention includes genetic polymorphisms and mutated genes due to mutagenesis. Here, the genetic polymorphism means that the base sequence of a gene is partially changed due to a natural mutation on the gene. Mutagenesis refers to artificially introducing a mutation into a gene. For example, a method using a site-specific mutagenesis kit (Mutan-K (manufactured by Takara Bio Inc.)) or a random mutagenesis kit. (BD Diversify PCR Random Mutagenesis (manufactured by CLONTECH)).

The yeast to be used in the present invention is not limited as long as it can introduce an L-ldh gene derived from Xenopus laevis, but is not limited thereto. Examples include yeast belonging to the genus Kluyveromyces) or Candida. Saccharomyces cerevisiae is preferable, and specifically, NBRC10505 strain and NBRC10506 strain are preferable.

As a method for introducing a gene encoding L-lactate dehydrogenase derived from Xenopus laevis of the present invention into yeast, for example, an L-ldh gene derived from Xenopus laevis is cloned, Examples include, but are not limited to, a method of transforming an expression vector incorporating the cloned gene into yeast, a method of inserting the cloned gene into a target site on a chromosome by homologous recombination, and the like.

The method for cloning the L-ldh gene derived from Xenopus laevis used in the present invention is not particularly limited, and a known method can be used. For example, based on known gene information, a method for amplifying and obtaining a necessary genetic region using PCR (Polymerase Chain Reaction) method, a method for cloning from a genomic library or cDNA library using homology or enzyme activity as an index, etc. Is mentioned. A method of chemical synthesis or genetic engineering based on known protein information is also possible.

As an expression vector into which the cloned L-ldh gene derived from Xenopus laevis is incorporated, an expression vector generally used in yeast can be used. An expression vector widely used in yeast has a sequence necessary for autonomous replication in yeast cells, a sequence necessary for autonomous replication in E. coli cells, a yeast selection marker, and an E. coli selection marker. In addition, in order to express the L-ldh gene derived from Xenopus laevis , it may also have a so-called regulatory sequence such as an operator, promoter, terminator or enhancer that regulates its expression. desirable.

  Here, the sequence necessary for autonomous replication in yeast cells is, for example, a yeast autonomous replication origin (ARS1) and a centromere sequence pair or the replication origin of a yeast 2 μm plasmid. The sequence necessary for autonomous replication is, for example, the ColE1 replication origin of Escherichia coli. Examples of yeast selection markers include auxotrophic complementary genes such as URA3 or TRP1, or drug resistance genes such as G418 resistance gene or neomycin resistance gene. Examples of selection markers for Escherichia coli include ampicillin resistance gene or kanamycin resistance gene. And antibiotic resistance genes such as

The regulatory sequence is not particularly limited as long as it can express the L-ldh gene derived from Xenopus laevis, but examples include acid phosphatase gene (PHO5), glyceraldehyde-3-phosphate dehydrogenase. Gene (TDH1,2,3), alcohol dehydrogenase gene (ADH1,2,3,4,5,6,7) gene, galactose metabolic gene (GAL1,7,10), cytochrome c gene (CYC1), triose phosphate Promoter sequences such as isomerase gene (TPI1), phosphoglycerate kinase gene (PGK1), phosphofructose kinase gene (PFK1), pyruvine decarboxylase gene (PDC1, 5, 6) and terminator sequences such as TDH3 gene Is mentioned.

By introducing an L-ldh gene derived from Xenopus laevis downstream of the promoter of the above expression vector, a vector capable of expressing the gene can be obtained. The resulting L-ldh gene expression vector derived from Xenopus laevis is transformed into yeast by the method described later, thereby introducing the L-ldh gene derived from Xenopus laevis into the yeast. be able to.

Moreover, the L-ldh gene derived from Xenopus laevis can be introduced into yeast by inserting the L-ldh gene derived from Xenopus laevis onto the chromosome. There is no particular limitation on the method of inserting into the chromosome of the Xenopus Rebisu (Xenopus laevis) L-ldh gene from yeast by the method described below a DNA containing the L-ldh gene from Xenopus Rebisu (Xenopus laevis) transformed, Xenopus Rebisu (Xenopus laevis) and how to insert the L-ldh gene derived from a random position in the chromosome by non-homologous recombination, Xenopus Rebisu (Xenopus laevis) DNA containing the L-ldh gene from Or the like can be used by homologous recombination. A method by homologous recombination is preferable.

As a method of inserting DNA containing the L-ldh gene derived from Xenopus laevis into the target site in the chromosome, preferably downstream of the promoter of the PDC1 gene, by homologous recombination, derived from Xenopus laevis PCR was performed using primers designed to add a homologous portion to the target site upstream and downstream of the DNA containing the L-ldh gene, and the obtained PCR fragment was transformed into yeast by the method described below. Although the method of converting is mentioned, It is not limited to this. In order to facilitate selection of transformants, the PCR fragment preferably contains a yeast selection marker.

  The PCR fragment used here can be prepared, for example, by the steps 1 to 3 in the following (1) to (3). The outline is shown in FIG.

(1) Step 1: L-ldh derived from Xenopus laevis using as a template a plasmid with a terminator connected downstream of the L-ldh gene derived from Xenopus laevis A fragment containing the gene and terminator is amplified by PCR. Primer 1 is designed so as to add a homologous sequence of 40 bp or more upstream of the target introduction site, and primer 2 is designed based on a sequence derived from a plasmid downstream from the terminator. Preferably, the sequence corresponding to the upstream side of the introduction target site added to the primer 1 is a sequence corresponding to the upstream of the pyruvate decarboxylase 1 gene (PDC1 gene).

  (2) Step 2: A fragment containing a yeast selection marker is amplified by PCR using a plasmid having a yeast selection marker, for example, pRS424, pRS426, etc. as a template and primers 3 and 4 as a set. Primer 3 is designed so that a sequence homologous to the sequence downstream of the terminator of the PCR fragment of Step 1 adds 30 bp or more, and primer 4 has a sequence of 40 bp or more corresponding to the downstream side of the introduction target site. Design to add. Preferably, the sequence corresponding to the downstream side of the target introduction site added to the primer 4 is a sequence corresponding to the downstream side of the PDC1 gene.

  (3) Step 3: PCR is carried out using the mixture of the PCR fragments obtained in Steps 1 and 2 as a template and Primers 1 and 4 as a set, so that both ends are upstream and downstream of the introduction target site. A PCR fragment containing a frog-derived L-ldh gene, a terminator and a yeast selection marker, to which the corresponding sequence has been added, is obtained. Preferably, the PCR fragment is a PCR fragment containing a frog-derived L-ldh gene, a terminator, and a marker gene with sequences corresponding to upstream and downstream of the PDC1 gene added to both ends.

In order to introduce the L-ldh gene expression vector or PCR fragment derived from Xenopus laevis obtained above into yeast, a method such as transformation, transduction, transfection, cotransfection or electroporation Can be used. Specific examples include a method using lithium acetate and a protoplast method.

  As a method for culturing the obtained transformant, for example, a known method described in “MD Rose et al.,“ Methods In Yeast Genetics ”, Cold Spring Harbor Laboratory Press (1990)” may be used. it can. Yeast into which a frog-derived L-ldh gene expression vector or PCR fragment has been introduced can be selected by culturing in a nutrient-free medium or a drug-added medium according to the yeast selection marker of the expression vector or PCR fragment.

L-lactic acid can be produced in the medium by culturing the yeast introduced with the L-ldh gene derived from Xenopus laevis of the present invention.

  The lactic acid production medium used in the method for producing L-lactic acid according to the present invention contains a carbon source, a nitrogen source, inorganic salts, and the like that can be assimilated by yeast, and can be used to efficiently culture yeast. Any of a natural medium and a synthetic medium may be used.

  The carbon source contained in the medium is saccharides such as sucrose, fructose, glucose, galactose, lactose, maltose, starch containing these saccharides, starch hydrolysate, sweet potato molasses, sugar beet molasses, high test molasses, cane Juice, cane juice extract or concentrate, raw sugar refined or crystallized from cane juice, refined sugar crystallized or crystallized from cane juice, organic acids such as acetic acid, alcohols such as ethanol, A raw material of sugar such as glycerin, or one containing at least one selected from these is preferable.

  The carbon source may be added all at once at the start of culture, or may be added in portions during culture or continuously.

  In the method for producing L-lactic acid of the present invention, the concentration of the carbon source is preferably 10 g or more and 1000 g or less, more preferably 50 g or more and 300 g or less, and particularly preferably 1 L culture solution. It is 50g or more and 200g or less in 1L culture solution. It is preferable that the concentration of the carbon source is 10 g or more and 1000 g or less in a 1 L culture solution because yeast having lactic acid synthesis ability grows normally and the lactic acid production of the yeast is efficient.

  In the method for producing L-lactic acid of the present invention, the lactic acid production medium to be used is more preferably a lactic acid production medium containing at least one selected from sucrose, fructose, glucose, galactose, lactose, and maltose. The lactic acid production medium used in the method for producing lactic acid is starch, starch hydrolyzate, sweet potato molasses, sugar beet molasses, high test molasses, cane juice, cane juice extract or concentrate, purified from cane juice or It is a lactic acid production medium containing at least one selected from crystallized raw sugar, refined sugar from cane juice or crystallized purified sugar, organic acids such as acetic acid, alcohols such as ethanol, and glycerin, preferable. In the present invention, these fermentation raw materials can be diluted as necessary.

  The nitrogen source contained in the fermentation raw material is ammonia gas, aqueous ammonia, ammonium salts, urea, nitrates, and other auxiliary organic nitrogen sources such as oil cakes, soybean hydrolysates, casein decomposition products, Other amino acids, vitamins, corn steep liquor, yeast or yeast extract, meat extract, peptides such as peptone, various fermented cells and hydrolysates thereof are preferably used.

  Moreover, phosphate, magnesium salt, calcium salt, iron salt, manganese salt etc. can be added suitably as inorganic salt contained in a fermentation raw material.

  The lactic acid production medium used in the method for producing L-lactic acid of the present invention can use an antifoaming agent such as polyether, alcohol or silicon as required.

  If the expression vector to be introduced is to be retained in yeast, it is preferable to use a medium to which a selective pressure is applied by a selection marker. Examples of the medium include a synthetic medium in which an amino acid encoded by a selection marker possessed by a vector is removed. A particularly preferable medium is a synthetic medium containing 1 to 10% of glucose as a carbon source and 0.67% of “Yeast Nitrogen Base without amino acid” (manufactured by DIFCO) as a nitrogen source, to which an appropriate amino acid is added.

  In the production of L-lactic acid, first, the yeast of the present invention is pre-cultured, and the pre-culture liquid is transferred to a new medium and main culture is performed, whereby L-lactic acid can be produced in the culture liquid. The culture temperature is not particularly limited as long as the growth of the strain is not substantially inhibited and can produce lactic acid, but is preferably a temperature in the range of 20 to 40 ° C., more preferably 25 to 35. The temperature is in the range of ° C, more preferably 30 ° C. Any method of standing, stirring or shaking can be employed for the culture.

  By culturing the yeast of the present invention under the above conditions, L-lactic acid is obtained in the culture solution. Although there is no restriction | limiting in particular in the measuring method of obtained L-lactic acid, For example, there exist the method using HPLC, the method using F-kit (made by Roche), etc.

  In the present invention, the L-lactic acid dehydrogenase activity indicates the activity of converting pyruvic acid and NADH into L-lactic acid and NAD +. Moreover, although not necessarily limited, L-lactate dehydrogenase activity can be compared using specific activity as an index. That is, yeast having the same L-ldh gene introduction method and genetic background is cultured under the same conditions, and the change in absorbance at 340 nm accompanying NADH reduction is measured using a protein extracted from the cultured cells. At that time, the specific activity of L-lactate dehydrogenase is expressed by the formula (1) by defining the amount of enzyme that decreases 1 μmol of NADH per minute at room temperature as 1 unit (Unit). Here, Δ340 is the decrease in absorbance at 340 nm per minute, and 6.22 is the mmol molecular extinction coefficient of NADH.

  Hereinafter, although an embodiment of the present invention is described with an example, these are illustrations and do not limit the present invention at all.

(Example 1: Preparation of L-ldh gene expression vector derived from Xenopus laevis )
As Xenopus Rebisu (Xenopus laevis) L-ldh gene from using L-LDH gene that have a nucleic acid sequence shown in SEQ ID NO: 1. Cloning of the L-ldh gene derived from Xenopus laevis was performed by PCR. For PCR, phagemid DNA prepared from a Xenopus laevis kidney-derived cDNA library (manufactured by STRATAGENE) according to the attached protocol was used as a template.

  For the PCR amplification reaction, KOD-Plus polymerase (manufactured by Toyobo Co., Ltd.) was used, and the attached reaction buffer, dNTPmix, etc. were used. A 50 μl reaction system was prepared so that the phagemid DNA prepared as described above was 50 ng / sample, the primer was 50 pmol / sample, and the KOD-Plus polymerase was 1 unit / sample. The reaction solution was thermally denatured at 94 ° C. for 5 minutes with a PCR amplification apparatus iCycler (manufactured by BIO-RAD), then 94 ° C. (thermal denature): 30 seconds, 55 ° C. (primer annealing): 30 seconds, 68 C. (Complementary strand extension): One cycle was performed for 30 cycles, and then cooled to a temperature of 4.degree. The gene amplification primers (SEQ ID NOs: 3 and 4) were prepared such that a SalI recognition sequence was added to the 5 terminal side and a NotI recognition sequence was added to the 3 terminal side.

  The PCR amplified fragment was purified, the end was phosphorylated with T4 polynucleotide Kinase (manufactured by Takara Bio Inc.), and then ligated to the pUC118 vector (cut with the restriction enzyme HincII and the cut surface was dephosphorylated). Ligation was performed using DNA Ligation Kit Ver.2 (Takara Bio Inc.). The ligation solution was transformed into competent cells of Escherichia coli DH5α (manufactured by Takara Bio Inc.) and plated on an LB plate containing 50 μg / mL of the antibiotic ampicillin and cultured overnight. For the grown colonies, plasmid DNA was collected with a miniprep, cut with restriction enzymes SalI and NotI, and a plasmid into which the frog-derived L-ldh gene was inserted was selected. All of these series of operations were performed according to the attached protocol.

The pUC118 vector inserted with the L-ldh gene derived from Xenopus laevis is cleaved with restriction enzymes SalI and NotI, and the DNA fragments are separated by 1% agarose gel electrophoresis. According to a conventional method, Xenopus laevis. The fragment containing the L-ldh gene derived from ) was purified. The obtained fragment containing the L-ldh gene is ligated to the XhoI / NotI cleavage site of the expression vector pTRS11 shown in FIG. Was used to select an expression vector into which the L-ldh gene derived from Xenopus laevis was inserted. Hereinafter, an expression vector incorporating the L-ldh gene derived from Xenopus laevis thus prepared will be referred to as pTRS102.

(Comparative Example 1: Preparation of bovine-derived L-ldh gene expression vector)
As a comparative example, a yeast into which a bovine-derived L-ldh gene was introduced was prepared.

  The bovine L-ldh gene (SEQ ID NO: 2) was cloned by PCR. For PCR, amplification reaction under the same conditions as in Example 1 was carried out using phagemid DNA prepared from a bovine skeletal muscle-derived cDNA library (manufactured by STRATAGENE) according to the attached protocol as a template. The gene amplification primers (SEQ ID NOs: 5 and 6) were prepared such that an XhoI recognition sequence was added to the 5 terminal side and a NotI recognition sequence was added to the 3 terminal side.

  Hereinafter, an expression vector into which a bovine-derived L-ldh gene was inserted was prepared in the same manner as in Example 1 except that the restriction enzyme XhoI was used in the place where the restriction enzyme SalI was used in Example 1. Hereinafter, an expression vector incorporating the bovine-derived L-ldh gene prepared in this manner is referred to as pTRS49.

(Example 2: Introduction of L-ldh gene expression vector derived from Xenopus laevis into yeast)
PTRS102 obtained as in Example 1 was transformed into a strain (hereinafter referred to as 29-1B strain) in which the pdc1 gene of yeast Saccharomyces cerevisiae NBRC10505 was disrupted. Transformation was performed by the lithium acetate method using YEASTMAKER YEAST Transformation System (manufactured by CLONTECH), and the details followed the attached protocol. The 29-1B strain used as a host is a strain lacking the ability to synthesize uracil. By the action of the URA3 gene of pTRS102, it is possible to select a transformant introduced with pTRS102 on a medium without uracil. Confirmation of introduction of the L-ldh gene expression vector derived from Xenopus laevis to the transformant thus obtained was carried out by using Genomic DNA Extraction Kit Gen Toru-kun (manufactured by Takara Bio Inc.) from the transformant. Then, genomic DNA containing plasmid DNA was extracted, and this was performed by PCR using Premix Taq (manufactured by Takara Bio Inc.) as a template. As the confirmation primer, the primer (SEQ ID NOs: 3 and 4) used when cloning the L-ldh gene derived from Xenopus laevis was used. As a result, it was confirmed that the L-ldh gene derived from Xenopus laevis was introduced into the strain transformed with pTRS102 . Hereinafter, the transformed strain into which pTRS102 has been introduced is referred to as 29-1B / pTRS102 strain.

(Comparative Example 2: Introduction of L-ldh gene expression vector derived from bovine into yeast)
PTRS49 obtained as in Comparative Example 1 was transformed into 29-1B in the same manner as in Example 2. Further, the introduction of bovine-derived L-ldh gene was also confirmed by the same method as in Example 2, and the oligonucleotides shown in SEQ ID NOs: 5 and 6 were used as primers. Hereinafter, the transformed strain into which pTRS49 is introduced is referred to as 29-1B / pTRS49 strain.

(Example 3: Introduction of L-ldh gene derived from Xenopus laevis into PDC1 locus)
1 containing an L-ldh gene derived from Xenopus laevis and a TDH3 terminator sequence by PCR using pTRS102 obtained in Example 1 as an amplification template and oligonucleotides (SEQ ID NOs: 7 and 8) as primer sets A .3 kb PCR fragment was amplified (corresponding to step 1 in FIG. 1). Here, SEQ ID NO: 7 was designed such that a sequence corresponding to 65 bp upstream from the start codon of the PDC1 gene was added.

  Next, a 1.2 kb PCR fragment containing the TRP1 gene, which is a yeast selection marker, was amplified by PCR using plasmid pRS424 as an amplification template and oligonucleotides (SEQ ID NOs: 10 and 11) as primer sets (step of FIG. 1). 2). Here, SEQ ID NO: 11 was designed such that a sequence corresponding to 65 bp downstream from the stop codon of the PDC1 gene was added.

  Each DNA fragment was separated by 1% agarose gel electrophoresis and purified according to a conventional method. The frog-derived L-ldh gene was obtained by PCR using a mixture of each 1.3 kb fragment and 1.2 kb fragment obtained here as an amplification template and oligonucleotides (SEQ ID NOs: 7 and 11) as primer sets, An approximately 2.5 kb PCR fragment to which the TDH3 terminator and TRP1 gene were linked was amplified (corresponding to step 3 in FIG. 1).

  The above PCR fragment was separated by 1% agarose gel electrophoresis, purified according to a conventional method, transformed into the yeast Saccharomyces cerevisiae NBRC10505, and cultured in a medium lacking tryptophan, whereby the frog-derived L-ldh gene was A transformant introduced downstream of the above PDC1 gene promoter was selected.

Confirmation that the transformant obtained as described above is a yeast in which the L-ldh gene derived from Xenopus laevis has been introduced downstream of the PDC1 gene promoter on the chromosome is as follows. Went to. First, genomic DNA of a transformant was prepared by a genomic DNA extraction kit Gen Toru-kun (manufactured by Takara Bio Inc.). This was confirmed by obtaining an amplified DNA fragment of 2.8 kb. For non-transformed strains, an amplified DNA fragment of about 2.1 kb can be obtained by the PCR. Hereinafter, a transformant in which the L-ldh gene derived from Xenopus laevis is introduced downstream of the PDC1 gene promoter on the chromosome is referred to as B2 strain. The upstream and downstream sequences of the PDC1 gene can be obtained from Saccharomyces Genome Database (URL: http://www.yeastgenome.org/).

(Comparative Example 3: Introduction of L-ldh gene derived from bovine into PDC1 locus)
A PCR fragment of 1.3 kb containing a bovine L-ldh gene and a TDH3 terminator was amplified by PCR using pTRS49 obtained in Comparative Example 1 as an amplification template and oligonucleotides (SEQ ID NOs: 8 and 9) as a primer set. did. Here, SEQ ID NO: 9 was designed so that a sequence corresponding to 65 bp upstream from the start codon of the PDC1 gene was added in the same manner as SEQ ID NO: 7.

  The above PCR fragment was separated by 1% agarose gel electrophoresis, purified according to a conventional method, mixed with the 1.2 kb PCR fragment containing the TRP1 gene obtained in Example 3, and oligonucleotide (SEQ ID NOs: 9 and 11). The PCR fragment using as a primer set was used to amplify an approximately 2.5 kb PCR fragment in which the bovine L-ldh gene, TDH3 terminator and TRP1 gene were linked.

  The above PCR fragment was transformed into NBRC10505 strain in the same manner as in Example 3, and cultured in a medium not containing tryptophan, so that the bovine L-ldh gene was introduced downstream of the PDC1 gene promoter on the chromosome. Transformants were selected.

  Confirmation that the transformant obtained as described above is a yeast in which the bovine-derived L-ldh gene has been introduced downstream of the PDC1 gene promoter on the chromosome is the same as in Example 3. went. Hereinafter, the transformed strain in which the bovine-derived L-ldh gene is introduced downstream of the PDC1 gene promoter on the chromosome is referred to as L5 strain.

(Example 4, comparative example 4: L-lactic acid productivity test 1)
L-lactic acid productivity test was performed using 29-1B / pTRS102 strain and 29-1B / pTRS49 strain obtained as in Example 2 and Comparative Example 2.

  10 mL of a medium having the composition shown in Table 1 (hereinafter abbreviated as SC3-Ura medium) is placed in a test tube, and a small amount of 29-1B / pTRS102 strain and 29-1B / pTRS49 strain are inoculated therein, and 30 ° C. Overnight culture (pre-culture). Next, 100 mL of SC3-Ura medium was placed in a 500 ml Erlenmeyer flask, and each pre-culture solution was inoculated in its entirety and cultured with shaking at 30 ° C. for 24 hours (pre-culture). Subsequently, a pre-culture solution 24 hours after the start of pre-culture was inoculated in a mini jar fermenter (manufactured by Maruhishi Bio-Engineering Co., Ltd., volume 5 L) into which 1 L of SC3-Ura medium was added, and the stirring speed (120 rpm ), Aeration (0.1 L / min), temperature (30 ° C.), and pH (pH 5) were kept constant (main culture). The culture solution for 40 hours after the start of the main culture was centrifuged, the obtained supernatant was subjected to membrane filtration, and the amount of L-lactic acid was measured by HPLC under the conditions shown below.

Column: Shim-Pack SPR-H (manufactured by Shimadzu Corporation)
Mobile phase: 5 mM p-toluenesulfonic acid (flow rate 0.8 mL / min)
Reaction solution: 5 mM p-toluenesulfonic acid, 20 mM Bistris, 0.1 mM EDTA · 2Na (flow rate 0.8 mL / min)
Detection method: electrical conductivity Temperature: 45 ° C.

  Table 2 shows the sugar yield of L-lactic acid calculated from the measurement results.

(Example 5, Comparative Example 5: L-lactic acid productivity test 2)
Using the B2 strain and the L5 strain obtained as in Example 3 and Comparative Example 3, an L-lactic acid productivity test was performed in the same manner as in Example 4. As a medium, a medium obtained by adding 152 mg / L uracil to the one shown in Table 1 (hereinafter abbreviated as SC3 medium) was used.

  A small amount of B2 and L5 strains were inoculated into 10 mL of SC3 medium in a test tube, and cultured overnight at 30 ° C. (pre-culture). Next, 100 mL of SC3 medium was placed in a 500-mL Erlenmeyer flask, and the entire culture solution was inoculated before shaking and cultured with shaking at 30 ° C. for 24 hours (preculture). Subsequently, a pre-culture solution 24 hours after the start of the pre-culture was inoculated in a mini jar fermenter (manufactured by Maruhishi Bio-Engineering Co., Ltd., volume 5 L) into which 1 L of SC3 medium was added, and the stirring speed (120 rpm) and aeration were performed. The culture was carried out with the amount (0.1 L / min), temperature (30 ° C.), and pH (pH 5) being constant (main culture). The culture solution for 30 hours after the start of the main culture was centrifuged, the obtained supernatant was subjected to membrane filtration, and the amount of L-lactic acid was measured by HPLC under the same conditions as in Example 4. Table 3 shows the sugar yield of L-lactic acid calculated from the measurement results.

From the results of Table 2 and Table 3, by cultivating the yeast introduced with the L-ldh gene derived from Xenopus laevis , culturing the yeast introduced with the L-ldh gene derived from bovine. In addition, L-lactic acid could be produced with a high yield to sugar.

(Example 6: Introduction of L-ldh gene derived from Xenopus laevis into TDH3 locus)
It was examined whether lactic acid productivity could be improved by introducing an L-ldh gene derived from Xenopus laevis inserted into the chromosome downstream of the TDH3 promoter.

In order to introduce the L-ldh gene derived from Xenopus laevis into the TDH3 locus in the same manner as in Example 3, a plasmid was prepared in which the TDH3 terminator of pTRS102 was changed to an ADH1 terminator.

  First, genomic DNA was extracted from the NBRC10505 strain using a genomic DNA extraction kit Gen Toru-kun (manufactured by Takara Bio Inc.), and the ADH1 terminator was cloned by PCR using the extracted genomic DNA as a template. For the PCR amplification reaction, KOD-Plus polymerase (manufactured by Toyobo Co., Ltd.) was used, and the attached reaction buffer, dNTPmix, etc. were used. A 50 μl reaction system was prepared so that the genomic DNA prepared as described above was 50 ng / sample, the primer was 50 pmol / sample, and the KOD-Plus polymerase was 1 unit / sample. The reaction solution was thermally denatured at 94 ° C. for 5 minutes with a PCR amplification device iCycler (manufactured by BIO-RAD), then 94 ° C. (thermal denature): 30 seconds, 60 ° C. (primer annealing): 30 seconds, 68 C. (Complementary strand extension): One cycle was performed for 30 cycles, and then cooled to a temperature of 4.degree. The gene amplification primers (SEQ ID NOs: 13 and 14) were prepared such that a NotI recognition sequence was added to the 5 terminal side and a HindIII recognition sequence was added to the 3 terminal side.

  The PCR amplified fragment was purified, the end was phosphorylated with T4 polynucleotide Kinase (manufactured by Takara Bio Inc.), and then ligated to the pUC118 vector (cut with the restriction enzyme HincII and the cut surface was dephosphorylated). Ligation was performed using DNA Ligation Kit Ver.2 (Takara Bio Inc.). The ligation solution was transformed into competent cells of Escherichia coli DH5α (manufactured by Takara Bio Inc.) and plated on an LB plate containing 50 μg / mL of the antibiotic ampicillin and cultured overnight. For the grown colonies, plasmid DNA was collected with a miniprep, cut with restriction enzymes NotI and HindIII, and a plasmid in which the ADH1 terminator was inserted was selected. All of these series of operations were performed according to the attached protocol. The prepared plasmid is designated as pUC118-ADH1t.

  Next, pUC118-ADH1t was cleaved with restriction enzymes NotI and HindIII, DNA fragments were separated by 1% agarose gel electrophoresis, and a fragment containing ADH1 terminator was purified according to a conventional method. The obtained fragment containing the ADH1 terminator was ligated to the NotI / HindIII cleavage site of pTRS102, and plasmid DNA was recovered by the same method as described above, and then cleaved with the restriction enzymes NotI and HindIII. Modified plasmids were selected. Hereinafter, the plasmid thus prepared is designated as pTRS150.

A 1.3 kb PCR fragment containing the L-ldh gene derived from Xenopus laevis and the ADH1 terminator sequence was amplified by PCR using this pTRS150 as a template and oligonucleotides (SEQ ID NOs: 8, 15) as a primer set. did. Here, the primer of SEQ ID NO: 15 was designed such that a sequence corresponding to 60 bp upstream from the start codon of the TDH3 gene was added.

  Next, a 1.2 kb PCR fragment containing the URA3 gene as a yeast selection marker was amplified by PCR using plasmid pRS426 as an amplification template and oligonucleotides (SEQ ID NOs: 10 and 16) as primer sets. Here, the primer of SEQ ID NO: 16 was designed such that a sequence corresponding to 60 bp downstream from the stop codon of the TDH3 gene was added.

Each PCR fragment was separated by 1% agarose gel electrophoresis and purified according to a conventional method. A mixture of each 1.3 kb fragment and 1.2 kb fragment obtained here was used as an amplification template, and derived from Xenopus laevis by a PCR method using oligonucleotides (SEQ ID NOs: 15 and 16) as primer sets. A PCR fragment of about 2.5 kb to which the L-ldh gene, ADH1 terminator and URA3 gene were ligated was amplified.

The above PCR fragment was separated by 1% agarose gel electrophoresis, purified according to a conventional method, transformed into the B2 strain into which the L-ldh gene derived from Xenopus laevis was introduced at the pdc1 locus, and uracil-free. By culturing in an additional medium, a transformant in which the L-ldh gene derived from Xenopus laevis was introduced downstream of the TDH3 gene promoter on the chromosome was selected.

Confirmation that the transformant obtained as described above is a yeast in which the L-ldh gene derived from Xenopus laevis is introduced downstream of the TDH3 gene promoter on the chromosome is as follows. Went to. First, the genomic DNA of the transformant was prepared using a genomic DNA extraction kit Gen Toru-kun (manufactured by Takara Bio Inc.). This was confirmed by obtaining an amplified DNA fragment of 2.8 kb. For non-transformed strains, an amplified DNA fragment of about 2.1 kb can be obtained by the PCR. Hereinafter, a transformant in which the L-ldh gene derived from Xenopus laevis is introduced downstream of the TDH3 gene promoter on the chromosome is referred to as B3 strain. The upstream and downstream sequences of the TDH3 locus can be obtained from Saccharomyces Genome Database (URL: http://www.yeastgenome.org/).

(Example 7: L-lactic acid productivity test 3)
Using the B3 strain obtained as in Example 6, an L-lactic acid productivity test was conducted in the same manner as in Examples 4 and 5. As the medium, SC3 medium was used as in Example 5.

  10 mL of SC3 medium was taken in a test tube, a small amount of B3 strain was inoculated therein, and cultured overnight at 30 ° C. (pre-culture). Next, 100 mL of SC3 medium was placed in a 500-mL Erlenmeyer flask, and the entire culture solution was inoculated before shaking and cultured with shaking at 30 ° C. for 24 hours (preculture). Subsequently, a pre-culture solution 24 hours after the start of the pre-culture was inoculated in a mini jar fermenter (manufactured by Maruhishi Bio-Engineering Co., Ltd., volume 5 L) into which 1 L of SC3 medium was added, and the stirring speed (120 rpm) and aeration were performed. The culture was carried out with the amount (0.1 L / min), temperature (30 ° C.), and pH (pH 5) being constant (main culture). The culture solution for 30 hours after the start of the main culture was centrifuged, the obtained supernatant was subjected to membrane filtration, and the amount of L-lactic acid was measured by HPLC under the same conditions as in Example 4. Table 4 shows the sugar yield of L-lactic acid calculated from the measurement results and the sugar yield of the B2 strain obtained in Example 5.

From the results of Table 4, by improving the yeast in which the gene encoding L-lactate dehydrogenase derived from Xenopus laevis was introduced in a state that can be expressed downstream of the promoter of the PDC1 gene on the chromosome A yeast capable of producing L-lactic acid with a higher yield to sugar could be produced.

Furthermore, the yeast in which the L-ldh gene derived from Xenopus laevis of the present invention has been introduced is further improved by a known method, and the yeast is cultured to obtain L-lactic acid at a higher sugar yield. It is possible to manufacture.

(Example 8, Comparative Example 6: Activity of L-lactate dehydrogenase)
Using the 29-1B / pTRS102 and 29-1B / pTRS49 strains obtained in Example 2 and Comparative Example 2, the L-lactate dehydrogenase activity derived from Xenopus laevis at pH 5 to 7 and bovine The derived L-lactate dehydrogenase activities were compared.

(A) Protein extraction from bacterial cells 10 mL of SC-Ura medium was put into a test tube, and a small amount of 29-1B / pTRS102 strain and 29-1B / pTRS49 strain were inoculated therein and cultured at 30 ° C. overnight ( Pre-culture). Next, 20 mL of SC-Ura medium was placed in a 100 mL Sakaguchi flask, and 2% of the preculture was inoculated there, followed by shaking culture for 24 hours (main culture). 10 mL of the main culture was collected by centrifugation, washed with 10 mL of phosphate buffer, and then suspended in 1 mL of phosphate buffer. The bacterial cell suspension was transferred to an Eppendorf tube, an equal amount of glass beads (SIGMA, 0.6 mm in diameter) was added, and the bacterial cells were crushed at 4 ° C. using a Micro Tube Mixer (TOMY). After disrupting the cells as described above, the supernatant obtained by centrifugation was used as an L-lactic acid dehydrogenase solution (hereinafter abbreviated as L-LDH enzyme solution).

(B) Measurement of L-lactate dehydrogenase activity A calibration curve prepared using bovine IgG (1.38 mg / mL, manufactured by BIO-RAD) as a standard for the concentration of the L-LDH enzyme solution obtained in (a). It was originally measured by BCA Protein Assay Kit (manufactured by PIERCE), and diluted with sterilized water so that each L-LDH enzyme solution was 0.5 mg / mL. Next, a 6-level mixed solution (excluding L-LDH enzyme solution and NADH) at the ratio shown in Table 5 was dispensed into a semi-micro cuvette, and the L-LDH enzyme solution and NADH were added and mixed immediately before the start of measurement. . Here, the 2 × BR buffer is a buffer buffer in which 0.08M acetic acid, phosphoric acid, and boric acid solutions are adjusted to pH 5, 6, and 7 with 5N NaOH, respectively.

  The decrease in absorbance at 340 nm at each level was measured with a spectrophotometer (Ultrospec 3300Pro Amersham), and the obtained Δ340 value was applied to equation (1) to calculate the specific activity. The measurement was performed at three levels of pH 5, 6, and 7. In the above measurement, when the specific activity of L-lactate dehydrogenase to be compared is higher than the specific activity of bovine-derived L-lactate dehydrogenase at two or more of the three pH levels, the L to be compared -Lactate dehydrogenase has higher activity than bovine-derived L-lactate dehydrogenase at pH 5-7. Table 6 shows the calculation results.

From this result, it was found that at pH 5 to 7, the L-lactate dehydrogenase activity derived from Xenopus laevis was higher than the activity of the L-lactate dehydrogenase derived from bovine. Further, from the results of Tables 2 and 3, by culturing the yeast into which the L-ldh gene derived from Xenopus laevis of the present invention was introduced, the yeast into which the bovine-derived L-ldh gene was introduced It was found that L-lactic acid can be produced at a higher sugar yield than that obtained by culturing.

  From the results shown in Table 2, Table 3 and Table 6, a gene encoding L-lactate dehydrogenase having an L-lactate dehydrogenase activity at pH 5 to 7 higher than that of bovine L-lactate dehydrogenase was introduced. By culturing the yeast thus produced, L-lactic acid can be produced at a higher sugar yield than by culturing yeast introduced with a bovine-derived L-ldh gene.

FIG. 1 is a schematic diagram illustrating a method for introducing an L-ldh gene downstream of the PDC1 gene promoter. FIG. 2 is a diagram showing a physical map of the yeast expression vector pTRS11 used in the present invention.

Claims (7)

A yeast introduced with a gene encoding L-lactate dehydrogenase derived from Xenopus laevis . The yeast according to claim 1, wherein the gene encoding the L-lactate dehydrogenase is a gene having the nucleic acid sequence shown in SEQ ID NO: 1. The yeast according to claim 1 or 2 , wherein the yeast belongs to the genus Saccharomyces. Wherein the yeast is Saccharomyces Serebise (Saccharomyces cerevisiae), yeast according to any one of claims 1-3. The yeast according to any one of claims 1 to 4 , wherein a gene encoding the L-lactate dehydrogenase is introduced downstream of a promoter that enables expression of the gene. The gene encoding the L-lactate dehydrogenase is introduced in a state that can be expressed downstream of a promoter of pyruvate decarboxylase 1 gene (PDC1 gene) on a chromosome. 5. The yeast according to any one of the items. A method for producing L-lactic acid, comprising culturing the yeast according to any one of claims 1 to 6 .

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