IL177586A - Plant cell/tissue culturing system and method - Google Patents

Plant cell/tissue culturing system and method

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Publication number
IL177586A
IL177586A IL177586A IL17758606A IL177586A IL 177586 A IL177586 A IL 177586A IL 177586 A IL177586 A IL 177586A IL 17758606 A IL17758606 A IL 17758606A IL 177586 A IL177586 A IL 177586A
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cells
container
plant
cell
protein
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IL177586A
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IL177586A0 (en
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Yoseph Shaaltiel
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Yoseph Shaaltiel
Protalix Ltd
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Priority claimed from US10/784,295 external-priority patent/US20050032211A1/en
Application filed by Yoseph Shaaltiel, Protalix Ltd filed Critical Yoseph Shaaltiel
Priority to IL177586A priority Critical patent/IL177586A/en
Publication of IL177586A0 publication Critical patent/IL177586A0/en
Publication of IL177586A publication Critical patent/IL177586A/en

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Description

453495 τηχ η^πηχ rr»|?i/D¾w nra-in bn^1? ntru raiyja PLANT CELL/TISSUE CULTURING, SYSTEM AND METHOD PLANT CELL/TISSUE CULTURING, SYSTEM AND METHOD FIELD OF THE INVENTION The invention is of a device, system and method for cell/tissue culture, and particular, of such a device, system and method for plant cell culture.
BACKGROUND OF THE INVENTION Cell and tissue culture techniques have been available for many years and are well known in the art. The prospect of using such culturing techniques economically is for the extraction of secondary metabolites, such as pharmaceutically active compounds, various substances to be used in cosmetics, hormones, enzymes, proteins, antigens, food additives and natural pesticides, from a harvest of the cultured cells or tissues. While potentially lucrative, this prospect has nevertheless not been effectively exploited with industrial scale bioreactors which use slow growing plant and animal cell cultures, because of the high capital costs involved.
Background art technology for the production of cell and/or tissue culture at industrial scale, to be used for the production of such materials, is currently based on glass bioreactors and stainless steel bioreactors, which are expensive capital items. Furthermore, these types of industrial bioreactors comprise complicated and expensive mixing technologies such " as impellers powered through expensive and complicated sterile seals; some expensive fermentors comprise an airlift multipart construction. Successful operation of these bioreactors often requires the implementation of aeration technologies which constantly need to be improved. In addition, such bioreactors are sized according to the peak volume capacity that is required at the time. Thus, problems arise when scaling up from pilot plant fermentors to large-scale fermentors, or when the need arises to increase production beyond the capacity of existing bioreactors. The current alternative to a large-capacity bioreactor, namely to provide a number of smaller glass or stainless steel bioreactors whose total volume capacity matches requirements, while offering a degree of flexibility for increasing or reducing overall capacity, is nevertheless much more expensive than the provision of a single larger bioreactor. Furthermore, running costs associated with most glass and stainless steel bioreactors are also high, due to low yields coupled with the need to sterilize the bioreactors after every culturing cycle. Consequently, the products extracted from cells or tissues grown in such bioreactors are expensive, and cannot at present compete commercially with comparable products produced with alternative techniques. In fact, only one Japanese company is known to use the aforementioned cell/tissue culture technique commercially, using stainless steel bioreactors. This company produces Shikonin, a compound which is used almost exclusively in Japan.
Industrial scale, and even large scale, bioreactor devices are traditionally permanent or semi-permanent components, and no disclosure nor suggestion of the concept of a disposable bioreactor device for solving the aforementioned problems regarding large scale cell/tissue culture production is known of. On the contrary, disposable fermentors and bioreactor devices are well known and exclusively directed to very small scale production volumes, such as in home brewing and for laboratory work. These bioreactor devices generally comprise a disposable bag which is typically cut open in order to harvest the cell/tissue yield, thus destroying any further usefulness of the bag. One such known disposable bioreactor is produced by Osmotec, Israel, (Agritech Israel, issue No. 1, Fall 1997, page 19) for small-scale use such as in laboratory research. This bioreactor comprises a conical bag having an inlet through which culture medium, air, inoculant and other optional additives may be introduced, and has a volume of only about 1.5 liters. Aeration is performed by introducing very small air bubbles which, in many cases, results in damage to cells, particularly in the case of plant cell cultures. In particular, these bags are specifically designed for a single culture/harvest cycle only, and the bag contents are removed by cutting off the bottom of the bag. These bags are therefore not directed towards an economical solution to the question of providing industrial quantities of the materials to be extracted from the culture, as discussed above.
The term "disposable" in the present application means that the devices (bags, bioreactors etc.) are designed to be discarded after use with only negligible loss. Thus devices made from stainless steel or glass are necessarily expensive devices and do not constitute a negligible loss for the operator of such devices. On the other hand, devices made from plastics such as flexible plastics, for example, are relatively inexpensive and may therefore be, and are, disposed of after use with negligible economic loss. Thus, the disposability of these bioreactor devices does not generally present an economic disadvantage to the user, since even the low capital costs of these items is offset against ease of use, storage and other practical considerations. In fact, at the small scale production levels to which these devices are directed, such is the economy of the devices that there is no motivation to increase the complexity of the device or its operation in order to allow such a device to be used repeatedly for more than one culturing/harvesting cycle.
Further, sterile conditions outside the disposable bioreactor devices are neither needed nor possible in many cases, and thus once opened to extract the harvestable yield, it is neither cost-effective, nor practical, nor often possible to maintain the opening sterile, leading to contamination of the bag and whatever contents may remain inside. Thus, these disposable devices have no further use after one culturing cycle.
Disposable bioreactor devices are thus relatively inexpensive for the quantities and production volumes which are typically required by non-industrial-scale users, and are relatively easy to use by non-professional personnel. In fact it is this aspect of simplicity of use and low economic cost, which is related to the low production volumes of the disposable devices, that is a major attraction of disposable bioreactor devices. Thus, the prior art disposable bioreactor devices have very little in common with industrial scale bioreactors— structurally, operationally or in the economics of scale~and in fact teach away from providing a solution to the problems associated with industrial scale bioreactors, rather than in any way disclosing or suggesting such a solution.
US20021 10915 discloses a disposable culture device, for culture of cells and/or tissue, but is silent regarding culture of cells genetically modified to express recombinant proteins, or the identity of such cells.
US6190913 discloses a disposable device for culturing cells, employing a rocking platform to create a wave-like motion for agitation and aeration of the medium, explicitly designed to eliminate air bubbles in the medium.
Another field in which some advances have been made in terms of experimental or laboratory work, while still not being useful for industrial-scale processes, is plant cell culture. Proteins for pharmaceutical use have been traditionally produced in mammalian or bacterial expression systems. In the past decade a new expression system has been developed in plants. This methodology utilizes Agrobacterium, a bacteria capable of inserting single stranded DNA molecules (T-DNA) into the plant genome. Due to the relative simplicity of introducing genes for mass production of proteins and peptides, this methodology is becoming increasingly popular as an alternative protein expression system (Ma, J. K. C, Drake, P.M.W., and Christou, P. (2003) Nature reviews 4, 794-805).
SUMMARY OF THE INVENTION The background art does not teach or suggest a device, system or method for industrial-scale production of materials through plant or animal cell culture with a disposable device. The background art also does not teach or suggest such a device, system or method for industrial-scale plant cell culture.
The present invention overcomes these deficiencies of the background art by providing a system and method for axenically culturing and harvesting cells and/or tissues, including bioreactors and fermentors. The system comprises at least one disposable device for axenically culturing and harvesting cells and/or tissue in at least one cycle, wherein the device comprises a sterilisable disposable container which comprises a reusable harvester which comprises a flow controller for harvesting of at least a desired portion of culture medium containing cells and/or tissues when desired, and wherein the device can be used continuously for at least one further consecutive culturing/harvesting cycle, wherein a remainder of the medium containing cells and/or tissue, remaining from a previous harvested cycle, may serve as inoculant for a next culture and harvest cycle, wherein the cells and/or tissue are plant cells and/or plant tissue and wherein the device comprises at least one air inlet being positioned at or near the bottom end of the device, wherein the bottom of the device is frustro-conical and wherein the air inlets are designed to produce bubbles comprising a mean diameter of between 1 to 10 mm, and wherein the system further comprises plant cells and/or plant tissue expressing a recombinant protein. This invention also relates to batteries of such devices which may be used for large-scale production of cells and tissues.
According to preferred embodiments of the present invention, the present invention is adapted for use with plant cell culture, for example by providing a low shear force while still maintaining the proper flow of gas and/or liquids, and/or while maintaining the proper mixing conditions within the container of the device of the present invention. For example, optionally and preferably the cells are grown in suspension, and aeration (flow of air through the medium, although optionally any other gas or gas combination could be used) is performed such that low shear force is present. To assist the maintenance of low shear force, optionally and preferably the container for containing the cell culture is made from a flexible material and is also at least rounded in shape, and is more preferably cylindrical and/or spherical in shape. These characteristics also optionally provide an optional but preferred aspect of the container, which is maintenance of even flow and even shear forces.
It should be noted that the phrase "plant cell culture" as used herein includes any type of native (naturally occurring) plant cells or genetically modified plant cells (e.g., transgenic and/or otherwise genetically engineered plant cell that is grown in culture) which mass production thereof or of an active ingredient expressed therein is commercially desired for use in the clinic (e.g., therapeutic), food industry (e.g., flavor, aroma), agriculture (e.g., pesticide), cosmetics, etc. The genetic engineering may optionally be stable or transient. In stable transformation, the nucleic acid molecule of the present invention is integrated into the plant genome and as such it represents a stable and inherited trait. In transient transformation, the nucleic acid molecule is expressed by the cell transformed but it is not integrated into the genome and as such it represents a transient trait.
Preferably, the culture features cells that are not assembled to form a complete plant, such that at least one biological structure of a plant is not present. Optionally and preferably, the culture may feature a plurality of different types of plant cells, but preferably the culture features a particular type of plant cell. It should be noted that optionally plant cultures featuring a particular type of plant cell may be originally derived from a plurality of different types of such plant cells.
The plant cell may optionally be any type of plant cell but is optionally and preferably a plant root cell (i.e. a cell derived from, obtained from, or originally based upon, a plant root), more preferably a plant root cell selected from the group consisting of, a celery cell, a ginger cell, a horseradish cell and a carrot cell. It will be appreciated that plant cells originating from structures other than roots can be transformed with Agrobaclerium rhizogenes, inducing hairy root cell development (see, for example, US Patent No. 4,588,693 to Strobel et al). Thus, as described hereinabove, and detailed in the Examples section below, the plant root cell may be an Agrobacterium rhizogenes transformed root cell.
Optionally and preferably, the plant cells are grown in suspension. The plant cell may optionally also be a plant leaf cell or a plant shoot cell, which are respectively cells derived from, obtained from, or originally based upon, a plant leaf or a plant shoot.
In a preferred embodiment, the plant root cell is a carrot cell. It should be noted that the transformed carrot cells of the invention are preferably grown in suspension. As mentioned above and described in the Examples, these cells were transformed with the Agrobacterium tumefaciens cells. According to a preferred embodiment of the present invention, any suitable type of bacterial cell may optionally be used for such a transformation, but preferably, an Agrobacterium tumefaciens cell is used for infecting the preferred plant host cells described below. Alternatively, such a transformation or transfection could optionally be based upon a virus, for example a viral vector and/or viral infection.
According to preferred embodiments of the present invention, there is provided a device for plant cell culture, comprising a disposable container for culturing plant cells. The disposable container is preferably capable of being used continuously for at least one further consecutive culturing/harvesting cycle, such that "disposable" does not restrict the container to only a single culturing/harvesting cycle. More preferably, the device further comprises a reusable harvester comprising a flow controller for enabling harvesting of at least a desired portion of the medium containing cells and/or tissues when desired, thereby enabling the device to be used continuously for at least one further consecutive culturing/harvesting cycle. Optionally and preferably, the flow controller maintains sterility of a remainder of the medium containing cells and/or tissue, such that the remainder of the medium remaining from a previous harvested cycle, serves as inoculant for a next culture and harvest cycle.
According to other embodiments of the present invention, there is provided a device, system and method which are suitable for culturing any type of cell and/or tissue. Preferably, the present invention is used for culturing a host cell. A host cell according to the present invention may optionally be transformed or transfected (permanently and/or transiently) with a recombinant nucleic acid molecule encoding a protein of interest or with an expression vector comprising the nucleic acid molecule. Such nucleic acid molecule comprises a first nucleic acid sequence encoding the protein of interest, optionally operably linked to one or more additional nucleic acid sequences encoding a signal peptide or peptides of interest. It should be noted that as used herein, the term "operably" linked does not necessarily refer to physical linkage.
"Cells", "host cells" or "recombinant host cells" are terms used interchangeably herein. It is understood that such terms refer not only to the particular subject cells but also to the progeny or potential progeny of such a cell. Because certain modifications may occur in succeeding generation due to either mutation or environmental influences, such progeny may not, in fact, be identical to the parent cell, but are still included within the scope of the term as used herein. "Host cell" as used herein refers to cells which can be recombinantly transformed with naked DNA or expression vectors constructed using recombinant DNA techniques. As used herein, the term "transfection" means the introduction of a nucleic acid, e.g., naked DNA or an expression vector, into a recipient cells by nucleic acid-mediated gene transfer. "Transformation", as used herein, refers to a process in which a cell's genotype is changed as a result of the cellular uptake of exogenous DNA or R A, and, for example, the transformed cell expresses a recombinant form of the desired protein.
Both monocotyledonous and dicotyledonous plant cell cultures are suitable for use with the methods and devices of the present invention. There are various methods of introducing foreign genes into both monocotyledonous and dicotyledonous plants (Potrykus, I., Annu. Rev. Plant. Physiol., Plant. Mol. Biol. (1991) 42:205-225; Shimamoto et al., Nature (1989) 338:274-276).
The principle methods of causing stable integration of exogenous DNA into plant genomic DNA include two main approaches: (i) Agrobacterium-mediated gene transfer: Klee et al. (1987) Annu. Rev.
Plant Physiol. 38:467-486; Klee and Rogers in Cell Culture and Somatic Cell Genetics of Plants, Vol. 6, Molecular Biology of Plant Nuclear Genes, eds. Schell, J., and Vasil, L. K., Academic Publishers, San Diego, Calif. (1989) p. 2-25; Gatenby, in Plant Biotechnology, eds. Kung, S. and Arntzen, C. J., Butterworth Publishers, Boston, Mass. (1989) p. 93-112. (ii) direct DNA uptake: Paszkowski et al., in Cell Culture and Somatic Cell Genetics of Plants, Vol. 6, Molecular Biology of Plant Nuclear Genes eds. Schell, J., and Vasil, L. K., Academic Publishers, San Diego, Calif. (1989) p. 52-68; including methods for direct uptake of DNA into protoplasts, Toriyama, K. et al. (1988) Bio/Technology 6: 1072-1074. DNA uptake induced by brief electric shock of plant cells: Zhang et al. Plant Cell Rep. (1988) 7:379-384. Fromm et al. Nature (1986) 319:791-793. DNA injection into plant cells or tissues by particle bombardment, Klein et al. Bio/Technology (1988) 6:559-563; McCabe et al. Bio/Technology (1988) 6:923-926; Sanford, Physiol. Plant. (1990) 79:206-209; by the use of micropipette systems: Neuhaus et al., Theor. Appl. Genet. (1987) 75:30-36; Neuhaus and Spangenberg, Physiol. Plant. (1990) 79:213-217; glass fibers or silicon carbide whisker transformation of cell cultures, embryos or callus tissue, U.S. Pat. No. 5,464,765 or by the direct incubation of DNA with germinating pollen, DeWet et al. in Experimental Manipulation of Ovule Tissue, eds. Chapman, G. P. and Mantell, S. H. and Daniels, W. Longman, London, (1985) p. 197-209; and Ohta, Proc. Natl. Acad. Sci. USA (1986) 83:715-719.
The Agrobacterium system includes the use of plasmid vectors that contain defined DNA segments that integrate into the plant genomic DNA. Methods of inoculation of the plant tissue vary depending upon the plant species and the Agrobacterium delivery system. A widely used approach is the leaf disc procedure which can be performed with any tissue explant that provides a good source for initiation of whole plant differentiation. Horsch et al. in Plant Molecular Biology Manual A5, Kluwer Academic Publishers, Dordrecht (1988) p. 1-9. A supplementary approach employs the Agrobacterium delivery system in combination with vacuum infiltration. The Agrobacterium system is especially viable in the creation of transgenic dicotyledenous plants.
There are various methods of direct DNA transfer into plant cells. In electroporation, the protoplasts are briefly exposed to a strong electric field. In microinjection, the DNA is mechanically injected directly into the cells using very small micropipettes. In microparticle bombardment, the DNA is adsorbed on microprojectiles such as magnesium sulfate crystals or tungsten particles, and the microprojectiles are physically accelerated into cells or plant tissues.
Following stable transformation plant propagation can be exercised. The most common method of plant propagation is by seed, or by micropropagation, which involves tissue culturing, tissue culture multiplication, differentiation and plant formation.
Although stable transformation is presently preferred, transient transformation of leaf cells, root cells, meristematic cells or other cells is also envisaged by the present invention.
Transient transformation can be effected by any of the direct DNA transfer methods described above or by viral infection using modified plant viruses.
Viruses that have been shown to be useful for the transformation of plant hosts include CaMV, TMV and BV. Transformation of plants using plant viruses is described in U.S. Pat. No. 4,855,237 (BGV), EP-A 67,553 (TMV), Japanese Published Application No. 63-14693 (TMV), EPA 194,809 (BV), EPA 278,667 (BV); and Gluzman, Y. et al., Communications in Molecular Biology: Viral Vectors, Cold Spring Harbor Laboratory, New York, pp. 172-189 (1988). Pseudovirus particles for use in expressing foreign DNA in many hosts, including plants, is described in WO 87/06261.
Construction of plant RNA viruses for the introduction and expression of non-viral exogenous nucleic acid sequences in plants is demonstrated by the above references as well as by Dawson, W. O. et al., Virology (1989) 172:285-292; Takamatsu et al. EMBO J. (1987) 6:307-311; French et al. Science (1986) 231 :1294-1297; and Takamatsu et al. FEBS Letters (1990) 269:73-76.
When the virus is a DNA virus, suitable modifications can be made to the virus itself. Alternatively, the virus can first be cloned into a bacterial plasmid for ease of constructing the desired viral vector with the foreign DNA. The virus can then be excised from the plasmid. If the virus is a DNA virus, a bacterial origin of replication can be attached to the viral DNA, which is then replicated by the bacteria. Transcription and translation of this DNA will produce the coat protein which will encapsidate the viral DNA. If the virus is an RNA virus, the virus is generally cloned as a cDNA and inserted into a plasmid. The plasmid is then used to make all of the constructions. The RNA virus is then produced by transcribing the viral sequence of the plasmid and translation of the viral genes to produce the coat protein(s) which encapsidate the viral RNA.
Construction of plant RNA viruses for the introduction and expression in plants of non-viral exogenous nucleic acid sequences such as those included in the construct of the present invention is demonstrated by the above references as well as in U.S. Pat. No. 5,316,931.
The viral vectors are encapsidated by the coat proteins encoded by the recombinant plant viral nucleic acid to produce a recombinant plant virus. The recombinant plant viral nucleic acid or recombinant plant virus is used to infect appropriate host plants. The recombinant plant viral nucleic acid is capable of replication in the host, systemic spread in the host, and transcription or expression of foreign gene(s) (isolated nucleic acid) in the host to produce the desired protein.
A polypeptide can also be expressed in the chromoplast. A technique for introducing exogenous nucleic acid sequences to the genome of the chromoplasts is known. This technique involves the following procedures. First, plant cells are chemically treated so as to reduce the number of chromoplasts per cell to about one. Then, the exogenous nucleic acid is introduced via particle bombardment into the cells with the aim of introducing at least one exogenous nucleic acid molecule into the chromoplasts. The exogenous nucleic acid is selected such that it is integratable into the chromoplast's genome via homologous recombination which is readily effected by enzymes inherent to the chromoplast. To this end, the exogenous nucleic acid includes, in addition to a gene of interest, at least one nucleic acid stretch which is derived from the chromoplast's genome. In addition, the exogenous nucleic acid includes a selectable marker, which serves by sequential selection procedures to ascertain that all or substantially all of the copies of the chromoplast genomes following such selection will include the exogenous nucleic acid. Further details relating to this technique are found in U.S. Pat. Nos. 4,945,050; and 5,693,507 which are incorporated herein by reference. A polypeptide can thus be produced by the protein expression system of the chromoplast and become integrated into the chromoplast's inner membrane.
It should be appreciated that a drug resistance or other selectable marker is intended in part to facilitate the selection of the transformants. Additionally, the presence of a selectable marker, such as drug resistance marker may be of use in detecting the presence of contaminating microorganisms in the culture, and/or in the case of a resistance marker based upon resistance to a chemical or other factor, the selection condition(s) may also optionally and preferably prevent undesirable and/or contaminating microorganisms from multiplying in the culture medium. Such a pure culture of the transformed host cell would be obtained by culturing the cells under conditions which are required for the induced phenotype's survival.
As indicated above, the host cells of the invention may be transfected or transformed with a nucleic acid molecule. As used herein, the term "nucleic acid" refers to polynucleotides such as deoxyribonucleic acid (DNA), and, where appropriate, ribonucleic acid (RNA). The terms should also be understood to include, as equivalents, analogs of either RNA or DNA made from nucleotide analogs, and, as applicable to the embodiment being described, single-stranded (such as sense or antisense) and double-stranded polynucleotides.
In yet another embodiment, the host cell of the invention may be transfected or transformed with an expression vector comprising the recombinant nucleic acid molecule. "Expression Vectors", as used herein, encompass vectors such as plasmids, viruses, bacteriophage, integratable DNA fragments, and other vehicles, which enable the integration of DNA fragments into the genome of the host. Expression vectors are typically self-replicating DNA or RNA constructs containing the desired gene or its fragments, and operably linked genetic control elements that are recognized in a suitable host cell and effect expression of the desired genes. These control elements are capable of effecting expression within a suitable host. Generally, the genetic control elements can include a prokaryotic promoter system or a eukaryotic promoter expression control system. Such system typically includes a transcriptional promoter, an optional operator to control the onset of transcription, transcription enhancers to elevate the level of RNA expression, a sequence that encodes a suitable ribosome binding site, RNA splice junctions, sequences that terminate transcription and translation and so forth. Expression vectors usually contain an origin of replication that allows the vector to replicate independently of the host cell.
Plasmids are the most commonly used form of vector but other forms of vectors which serves an equivalent function and which are, or become, known in the art are suitable for use herein. See, e.g., Pouwels et al. Cloning Vectors: a Laboratory Manual (1985 and supplements), Elsevier, N.Y.; and Rodriquez, et al. (eds.) Vectors: a Survey of Molecular Cloning Vectors and their Uses, Buttersworth, Boston, Mass (1988), which are incorporated herein by reference.
In general, such vectors contain, in addition, specific genes which are capable of providing phenotypic selection in transformed cells. The use of prokaryotic and eukaryotic viral expression vectors to express the genes coding for the polypeptides of the present invention are also contemplated.
In one preferred embodiment, the host cell of the invention may be a eukaryotic or prokaryotic cell.
In a preferred embodiment, the host cell of the invention is a prokaryotic cell, preferably, a bacterial cell. In another embodiment, the host cell is a eukaryotic cell, such as a plant cell as previously described, or a mammalian cell.
The term "operably linked" is used herein for indicating that a first nucleic acid sequence is operably linked with a second nucleic acid sequence when the first nucleic acid sequence is placed in a functional relationship with the second nucleic acid sequence. For instance, a promoter is operably linked to a coding sequence if the promoter affects the transcription or expression of the coding sequence. Optionally and preferably, operably linked DNA sequences are contiguous (e.g. physically linked) and, where necessary to join two protein-coding regions, in the same reading frame. Thus, a DNA sequence and a regulatory sequence(s) are connected in such a way as to permit gene expression when the appropriate molecules (e.g., transcriptional activator proteins) are bound to the regulatory sequence(s).
In another embodiment, this recombinant nucleic acid molecule may optionally further comprise an operably linked terminator which is preferably functional in the host cell, such as a terminator that is functional in plant cells. The recombinant nucleic acid molecule of the invention may optionally further comprise additional control, promoting and regulatory elements and/or selectable markers. It should be noted that these regulatory elements are operably linked to the recombinant molecule.
Regulatory elements that may be used in the expression constructs include promoters which may be either heterologous or homologous to the host cell, preferably a plant cell. The promoter may be a plant promoter or a non-plant promoter which is capable of driving high levels of transcription of a linked sequence in the host cell, such as in plant cells and plants. Non-limiting examples of plant promoters that may be used effectively in practicing the invention include cauliflower mosaic virus (CaMV) 35S, rbcS, the promoter for the chlorophyll a/b binding protein, Adhl, NOS and HMG2, or modifications or derivatives thereof. The promoter may be either constitutive or inducible. For example, and not by way of limitation, an inducible promoter can be a promoter that promotes expression or increased expression of the lysosomal enzyme nucleotide sequence after mechanical gene activation (MGA) of the plant, plant tissue or plant cell.
The expression vectors used for transfecting or transforming the host cells of the invention can be additionally modified according to methods known to those skilled in the art to enhance or optimize heterologous gene expression in plants and plant cells. Such modifications include but are not limited to mutating DNA regulatory elements to increase promoter strength or to alter the protein of interest.
The present invention therefore represents a revolutionary solution to the aforementioned problems of the background art, by providing a disposable bioreactor device for the large-scale production of cell/tissue cultures. The device of the present invention, while essentially disposable, is characterized in comprising a reusable harvesting outlet for enabling harvesting of at least a portion of the medium containing cells and/or tissue when desired, thereby enabling the device to be used continuously for one or more subsequent consecutive culturing/harvesting cycles. In an industrial environment, sterility of the harvesting outlet during and after harvesting may be assured to a significantly high degree at relatively low cost, by providing, for example, a sterile hood in which all the necessary connections and disconnections of services to and from the device may be performed. When eventually the device does become contaminated it may then be disposed of with relatively little economic loss. Such devices may be cheaply manufactured, even for production volumes of 50 or 100 liters or more of culture. Further, the ability to perform a number of culturing/harvesting cycles is economically lucrative, lowering even further the effective cost per device.
A battery of such devices can be economically arranged, and the number of devices in the battery may be controlled to closely match production to demand. Thus, the transition from pilot plant bioreactors to large scale production may also be achieved in a relatively simple and economic manner by adding more devices to the battery. Further, the relatively low production volume of each device, coupled with the lack of solid mixers, results in relatively higher yields as compared to typical stainless steel bioreactors.
The device of the present invention therefore has a number of advantages over the background art, including but not limited to, being disposable; being economical to produce and simple to use; being disposable, but also being usable continuously for a plurality of consecutive cycles of culturing and harvesting desired cells and/or tissues; and optionally being suitable for operation according to a method in which inoculant is only required to be provided for the first culturing cycle, while inoculant for subsequent cycles is provided by a portion of the culture broth which remains in the device after harvesting same in a preceding cycle.
According to the present invention, there is provided a disposable device for axenically culturing and harvesting cells and/or tissue in at least one cycle, the device comprising a sterilisable disposable container having a top end and a bottom end, which container may be at least partially filled with a suitable sterile biological cell and/or tissue culture medium and/or axenic inoculant and/or sterile air and/or required other sterile additives, the container comprising: (i) a gas outlet for removing excess air and/or waste gases from the container; (ii) an additive inlet for introducing the inoculant and/or the culture medium and/or the additives into the container; and characterized in further comprising (iii) a reusable harvester comprising a flow controller for enabling harvesting of at least a desired portion of the medium containing cells and/or tissues when desired, thereby enabling the device to be used continuously for at least one further consecutive culturing/harvesting cycle, wherein a remainder of the medium containing cells and/or tissue, remaining from a previous harvested cycle, may serve as inoculant for a next culture and harvest cycle, wherein the culture medium and/or the required additives are provided.
Optionally, the disposable container is transparent and/or translucent. Also optionally the device further comprises an air inlet for introducing sterile gas in the form of bubbles into the culture medium through a first inlet opening, wherein the air inlet is connectable to a suitable gas supply. Preferably, the air inlet is for introducing sterile gas more than once during culturing. More preferably, the air inlet is for continuously introducing sterile gas. Optionally, a plurality of different gases are introduced at different times and/or concentrations through the air inlet.
Preferably, the harvester comprising a contamination preventer for substantially preventing introduction of contaminants into the container via the harvester.
Optionally, the container is non-rigid. Preferably, the container is made from a non-rigid plastic material. More preferably, the material is selected from the group comprising polyethylene, polycarbonate, a copolymer of polyethylene and nylon, PVC and EVA.
Optionally, the container is made from a laminate of more than one layer of the materials.
Also optionally, the container is formed by fusion bonding two suitable sheets of the material along predetermined seams.
Preferably, the air inlet comprises an air inlet pipe extending from the inlet opening to a location inside the container at or near the bottom end thereof.
Also preferably, the at least one air inlet comprises a least one air inlet pipe connectable to a suitable air supply and in communication with a plurality of secondary inlet pipes, each the secondary inlet pipe extending to a location inside the container, via a suitable inlet opening therein, for introducing sterile air in the form of bubbles into the culture medium. More preferably, the device comprises a substantially box-like geometrical configuration, having an overall length, height and width. Most preferably, the height-to-length ratio is between about 1 and about 3, and preferably about 1.85. Optionally, the height to width ratio is between about 5 and about 30, and preferably about 13.
Preferably, the device comprises a support aperture substantially spanning the depth of the device, the aperture adapted to enable the device to be supported on a suitable pole support.
Optionally, the device further comprises a support structure for supporting the device. Preferably, the support structure comprises a pair of opposed frames, each of the frames comprising upper and lower support members spaced by a plurality of substantially parallel vertical support members suitably joined to the upper and lower support members. More preferably, the plurality of vertical support members consists of at least one the vertical support member at each longitudinal extremity of the upper and lower support members.
Also more preferably, the frames are spaced from each other by a plurality of spacing bars releasably or integrally joined to the frames.
Also more preferably, the spacing bars are strategically located such that the device may be inserted and removed relatively easily from the support structure.
Optionally, the lower support member of each the frame comprises at least one lower support adapted for receiving and supporting a corresponding portion of the bottom end of the device.
Preferably, each the lower support is in the form of suitably shaped tab projecting from each of the lower support members in the direction of the opposed frame.
Optionally, the frames each comprise at least one interpartitioner projecting from each frame in the direction of the opposed frame, for to pushing against the sidewall of the device at a predetermined position, such that opposed pairs of the interpartitioner effectively reduce the width of the device at the predetermined position.
Preferably, the interpartitioner comprises suitable substantially vertical members spaced from the upper and lower support members in a direction towards the opposed frame with suitable upper and lower struts.
Optionally, the support structure may comprise a plurality of castors for transporting the devices.
Optionally, at least some of the air bubbles comprise a mean diameter of between about 1 mm and about 10 mm.
Also optionally, at least some of the air bubbles comprise a mean diameter of about 4 mm.
Optionally, the container comprises a suitable filter mounted on the gas outlet for substantially preventing introduction of contaminants into the container via the gas outlet.
Preferably, the container further comprises a suitable filter mounted on the additive inlet for substantially preventing introduction of contaminants into the container via the additive inlet.
Also preferably, there is a contamination preventer which comprises a U-shaped fluid trap, wherein one arm thereof is aseptically mounted to an external outlet of the harvester by suitable aseptic connector.
Preferably, the harvester is located at the bottom of the bottom end of the container.
Also preferably, the harvester is located near the bottom of the bottom end of the container, such that at the end of each harvesting cycle the remainder of the medium containing cells and/or tissue automatically remains at the bottom end of the container up to a level below the level of the harvester.
Optionally and preferably, the remainder of the medium containing cells and/or tissue is determined at least partially according to a distance d2 from the bottom of the container to the harvester.
Preferably, the remainder of the medium containing cells and/or tissue comprises from about 2.5% to about 45% of the original volume of the culture medium and the inoculant. More preferably, the remainder of the medium containing cells and/or tissue comprises from about 10% to about 20% of the original volume of the culture medium and the inoculant.
Optionally, the bottom end is substantially convex.
Also optionally, the bottom end is substantially frusta-conical.
Preferably, the container comprises an internal tillable volume of between about 5 liters and about 200 liters, preferably between about 50 liters and 150 liters, and preferably about 100 liters.
Optionally, the device further comprises suitable attacher for attaching the device to a suitable support structure. Preferably, the attacher comprises a loop of suitable material preferably integrally attached to the top end of the container.
According to preferred embodiments of the present invention, the device is adapted to plant cell culture. Preferably, the plant cell culture comprises plant cells obtained from a plant root. More preferably, the plant root is selected from the group consisting of Agrobacterium rihzogenes transformed root cell, celery cell, ginger cell, horseradish cell and carrot cell.
Optionally, there is provided a battery of the devices, comprising at least two the disposable devices as previously described. Preferably, the devices are supported by a suitable support structure via the attacher of each the device. Also preferably, the gas outlet of each the device is suitably connected to a common gas outlet piping which optionally comprises a blocker for preventing contaminants from flowing into the devices. Preferably, the blocker comprises a suitable filter.
Optionally, the additive inlet of each the device is suitably connected to a common additive inlet piping having a free end optionally comprising suitable aseptic connector thereat.
Optionally, the free end is connectable to a suitable supply of medium and/or additives.
Preferably, the harvester of each the device is suitably connected to a common harvesting piping having a free end optionally comprising suitable aseptic connector thereat.
More preferably, the battery further comprises a contamination preventer for substantially preventing introduction of contaminants into the container via the common harvesting piping. Preferably, the contamination preventer comprises a U-shaped fluid trap, wherein one arm thereof is free having an opening and wherein the other end thereof is aseptically mountable to the free end of the common harvesting piping via suitable aseptic connector.
More preferably, the free end of the U-tube is connectable to a suitable receiving tank.
Optionally, the air inlet of each the device is suitably connected to a common air inlet piping having a free end optionally comprising suitable aseptic connector thereat. Preferably, the free end is connectable to a suitable air supply.
According to other preferred embodiments of the present invention, there is provided a method for axenically culturing and harvesting cells and/or tissue in a disposable device comprising: providing the device which comprises a sterilisable transparent and/or translucent disposable container having a top end and a bottom end, which container may be at least partially filled with a suitable sterile biological cell and/or tissue culture medium and/or axenic inoculant and/or sterile air and/or other sterile required additives, the container comprising: (i) gas outlet for removing excess air and/or waste gases from the container; (ii) additive inlet for introducing the inoculant and/or the culture medium and/or the additives into the container; (iii) reusable harvester comprising suitable flow controller for enabling harvesting of at least a portion of the medium containing cells and/or tissue when desired, thereby enabling the device to be used continuously for at least one further consecutive cycle, wherein a remainder of the medium containing cells and/or tissue, remaining from a previously harvested cycle may serve as inoculant for a next culture and harvest cycle, wherein the culture medium and/or the required additives are provided; providing axenic inoculant via the harvester; providing sterile the culture medium and/or, sterile the additives via the additive inlet; optionally illuminating the container with external light; and allowing the cells and/or tissue to grow in the medium to a desired yield.
Preferably, the method further comprises: allowing excess air and/or waste gases to leave the container continuously via the gas outlet.
More preferably, the method further comprises: checking for contaminants and/or the quality of the cells/tissues which are produced in the container: if contaminants are found or the cells/tissues which are produced are of poor quality, the device and its contents are disposed of; if contaminants are not found, harvesting the desired portion of the medium containing cells and/or tissue.
Most preferably, while harvesting the desired portion, leaving a remainder of medium containing cells and/or tissue in the container, wherein the remainder of medium serves as inoculant for a next culture/harvest cycle. Also most preferably, the method further comprises: providing sterile the culture medium and/or sterile the additives for the next culture/harvest cycle via the additive inlet; and repeating the growth cycle until the contaminants are found or the cells/tissues which are produced are of poor quality, whereupon the device and its contents are disposed of.
Preferably, the device further comprises an air inlet for introducing sterile air in the form of bubbles into the culture medium through a first inlet opening connectable to a suitable sterile air supply, the method further comprising the step of providing sterile air to the air inlet during the first and each subsequent cycle. More preferably, the sterile air is supplied continuously throughout at least one culturing cycle.
Also more preferably, the sterile air is supplied in pulses during at least one culturing cycle.
According to still other preferred embodiments of the present invention, there is provided a method for axenically culturing and harvesting cells and/or tissue in a battery of disposable devices comprising: providing a battery of devices as described above, and for at least one the device thereof: providing axenic inoculant to the device via the common harvesting piping; providing sterile the culture medium and/or sterile the additives to the device via the common additive inlet piping; optionally illuminating the device with external light; and allowing the cells and/or tissue in the device to grow in the medium to a desired yield.
Preferably, the method further comprises: allowing excess air and/or waste gases to leave the device continuously via the common gas outlet piping; checking for contaminants and/or the quality of the cells/tissues which are produced in the device: if in the device contaminants are found or the cells/tissues which are produced are of poor quality, the harvester of the device is closed off preventing contamination of other the devices of the battery; if in all of the devices of the battery contaminants are found or the cells/tissues which are produced therein are of poor quality, all the devices and their contents are disposed of; if contaminants are not found and the quality of the produced cells/tissues is acceptable, for each harvestable device, harvesting a desired portion of the medium containing cells and/or tissue via the common harvesting piping and the contamination preventer to a suitable receiving tank.
Preferably, a remainder of medium containing cells and/or tissue remains in the container, wherein the remainder serves as inoculant for a next culture/harvest cycle; and the method further comprises: providing sterile the culture medium and/or sterile the additives for the next culture/harvest cycle via the additive inlet.
Also preferably, the growth cycle is repeated until the contaminants are found or the cells/tissues which are produced are of poor quality for all of the devices of the battery, whereupon the contamination preventer is disconnected from the common harvester and the devices and their contents are disposed of.
According to yet other preferred embodiments of the present invention, there is provided a method for axenically culturing and harvesting cells and/or tissue in a battery of disposable devices comprising: providing a battery of devices as described above, and for at least one the device thereof: providing axenic inoculant to the device via the common harvesting piping; providing sterile the culture medium and/or sterile the additives to the device via the common additive inlet piping; providing sterile air to the device via the common air inlet piping; optionally illuminating the device with external light; and allowing the cells and/or tissue in the device to grow in the medium to a desired yield.
Preferably, the method further comprises: allowing excess air and/or waste gases to leave the device continuously via the common gas outlet piping; and checking for contaminants and/or the quality of the cells/tissues which are produced in the device: if in the device contaminants are found or the cells/tissues which are produced are of poor quality, the harvester of the device is closed off preventing contamination of other the devices of the battery; if in all of the devices of the battery contaminants are found or the cells/tissues which are produced therein are of poor quality, all the devices and their contents are disposed of; if contaminants are not found and the quality of the produced cells/tissues is acceptable, the device is considered harvestable.
More preferably, the method further comprises: harvesting at least a desired portion of the medium containing cells and/or tissue for each harvestable device via the common harvesting piping and the contamination preventer to a suitable receiving tank.
Most preferably, a remainder of medium containing cells and/or tissue remains in the container, wherein the remainder serves as inoculant for a next culture/harvest cycle; and the method further comprises: providing sterile the culture medium and/or sterile the additives for the next culture/harvest cycle via the additive inlet.
Also most preferably, the growth cycle is repeated until the contaminants are found or the cells/tissues which are produced are of poor quality for all of the devices of the battery, whereupon the contamination preventer is disconnected from the common harvester and the devices and their contents are disposed of.
According to still other embodiments of the present invention, there is provided a device for plant cell culture, comprising a disposable container for culturing plant cells. Preferably, the disposable container is capable of being used continuously for at least one further consecutive culturing/harvesting cycle. More preferably, the device further comprises: a reusable harvester comprising a flow controller for enabling harvesting of at least a desired portion of the medium containing cells and/or tissues when desired, thereby enabling the device to be used continuously for at least one further consecutive culturing/harvesting cycle. Most preferably, the flow controller maintains sterility of a remainder of the medium containing cells and/or tissue, such that the remainder of the medium remaining from a previous harvested cycle, serves as inoculant for a next culture and harvest cycle.
According to yet other embodiments of the present invention, there is provided a method for culturing plant cells, comprising: culturing plant cells in a disposable container.
Preferably, the disposable container comprises an air inlet for introducing sterile gas or a combination of gases.
More preferably, the sterile gas comprises air. Most preferably, the sterile gas combination comprises a combination of air and additional oxygen.
Preferably, the oxygen is added separately from the air.
More preferably, the oxygen is added a plurality of days after initiating cell culture.
Preferably, the sterile gas or combination of gases is added more than once during culturing.
Also preferably, the air inlet is for continuously introducing sterile gas.
Also preferably, a plurality of different gases are introduced at different times and/or concentrations through the air inlet.
Preferably, the method further comprises: aerating the cells through the inlet. More preferably, the aerating comprises administering at least 1.5 L gas per minute.
Optionally and preferably, the method further comprises: providing sufficient medium for growing the cells. More preferably, sufficient medium is at a concentration of at least about 125% of a normal concentration of medium.
Preferably, the method further comprises: adding media during growth of the cells but before harvesting. More preferably, the method further comprises adding additional media at least about 3 days after starting culturing the cells.
Preferably, the method further comprises: replacing media completely at least about 3 days after starting culturing the cells.
Also preferably, the medium comprises a mixture of sugars.
Also preferably, the medium comprises a larger amount of sucrose than normal for cell culture.
Preferably, the plant cells produce a recombinant protein.
BRIEF DESCRIPTION OF THE DRAWINGS The invention is herein described, by way of example only, with reference to the accompanying drawings, wherein: FIGS. 1A-C illustrate the main components of a first embodiment of the device of the present invention in front elevation and in cross-sectional side view, respectively for Figures 1A and IB, and an exemplary system according to the present invention for Figure 1C; FIGS. 2a and 2b illustrate the main components of a second embodiment of the device of the present invention in front elevation and in cross-sectional side view, respectively; FIG. 3 illustrates the main components of a third embodiment of the device of the present invention in cross-sectional side view; FIG. 4 illustrates the seam lines of the first embodiment of the device of the present invention in front elevation; FIGS. 5a and 5b illustrate the main components of a fourth embodiment of the device of the present invention in side view and in cross-sectional top view, respectively; FIGS. 5(c) and 5(d) illustrate transverse cross-sections of the fourth embodiment taken along lines B-B and C-C in FIG. 5(a); FIGS. 6a and 6b illustrate the main components of a fifth embodiment of the device of the present invention in side view and in cross-sectional top view, respectively; FIGS. 6(c) and 6(d) illustrate transverse cross-sections of the fifth embodiment taken along lines B-B and C-C in FIG. 6(a); FIG. 7 illustrates the embodiment of FIG. 5 in perspective view; FIG. 8 illustrates the embodiment of FIG. 6 in perspective view; FIG. 9 illustrates a support structure for use with the embodiments of FIGS. 5 to 8; FIG. 10 illustrates the main components of a preferred embodiment of the battery of the present invention comprising a plurality of devices of any one of FIGS. 1 to 8; FIGS. 11A and 1 IB show an expression cassette and vector for use with the present invention; FIG. 12 shows growth of transformed (Glucocerebrosidase (GCD)) carrot cell suspension in a device according to the present invention as opposed to an Erlenmeyer flask; FIG. 13 shows the relative amount of GCD produced by the device according to the present invention as opposed" to an Erlenmeyer flask; FIG. 14 shows the start point of 7% and 15% packed cell volume with regard to the growth curves, which are parallel; FIG. 15 shows the amount of GCD protein from a quantitative Western blot for these two growth conditions; FIG. 16 shows growth over an extended period of time (14 days) to find the stationary point; FIG. 17 shows that the maximum amount of GCD (relative to other proteins) is produced by transformed cells through day 8, after which the amount of GCD produced starts to decline; FIG. 18 shows that the replacement of media and/or the addition of fresh media on the fourth day maintains high growth level of cells beyond day 8, while Figures 19 and 20 show the amount of GCD produced under these conditions; FIG. 21 shows the effect of different sugar regimes on cell growth; FIG. 22 shows the effect of different sugar regimes on production of GCD; FIGS. 23 A and 23B show the effect of aeration rate on cell growth in a 10 L device according to the present invention; and FIG. 24 shows the effect 6f adding more oxygen to the device according to the present invention.
FIG. 25 shows the electrophoretic separation of Human Factor X coding sequence (arrow) following amplification by PCR.
FIG. 26 shows the ligated CE-FX-KDEL construct, comprising the Factor X sequence ligated between the CaMV35S omega and OCS Terminator sequences. Location of the recognition sites for restriction enzyme is marked.
FIG. 27 is a map of the pBluescript SK vector, into which the ligated cassette CE-FX-KDEL was introduced.
FIG. 28 is a restriction analysis of the clones transformed with the plasmids pzp-FX-ER and pGREEN nos-kana-FX-ER, showing the cassettes, and plasmids used in cloning and expression of the Human Factor X in plant cells. Lane 1 is clone 3 transformed with the construct pzp-FX-ER, before restriction enzyme digestion. Lane 2 is clone 3 after EcoRl and Hindlll digestion. Lane 3 is clone 4 transformed with the construct pzp-FX-ER, before restriction enzyme digestion. Lane 4 is clone 4 after EcoRl and Hindlll digestion. Lane 5 is the CaMV35S+omega-FX-ER expression cassette. Lane 6 is clone 3 transformed with pGREEN nos-kana-FX-ER, before restriction enzyme digestion. Lane 7 is clone 3 after Asp718 and Xbal digestion. Lane 8 is clone 8 transformed with pGREEN nos-kana-FX-ER, before restriction enzyme digestion. Lane 9 is clone 8 after Asp718 and Xbal digestion. Note the band of the CaMV35S+omega-FX-ER expression cassette in all the transformed clones. MW = molecular weight standards.
FIG. 29 shows the TDNA of the pGREEN-nos-kana-FX-ER construct, comprising the Factor X sequence ligated between the CaMV35S+Omega, OCS Terminator and NPTII sequences. Location of the recognition sites for restriction enzyme is marked.
FIG. 30 shows a Western blot analysis of the cellular contents of a number of transformed carrot cell lines. Factor X expression was detected on the Western blot by purified polyclonal rabbit anti-Human Factor X IgG (Affinity Biologicals, Hamilton, Ontario, Canada). Note the strong expression of Factor X in the line transformed with pGREEN-nos-kana-FX-ER (lanes 1 and 2). MW = molecular weight standards.
FIG. 31 shows the accurate cleavage of the recombinant Human Factor X expressed in plant cells. The endopeptidase furin, which is responsible for propeptide removal and single chain to light/heavy chain processing of Human Factor X, accurately digested the recombinant Human Factor X (see lanes 4 and 5) expressed in plant cells to the size of the active Xa. MW = molecular weight standards.
FIG. 32 is a graph showing the catalytic activity of the recombinant Human Factor X expressed in plant cells. Cell extracts from transformed carrot cells ( ·, A and ■) and untransformed controls (+ , * and ·) were reacted with the chromogenic substrate Pefachrome, and the products monitored by spectrophotometry at OD4o5 nm- FIG. 33 shows the electrophoretic separation of Human Ιίηβ coding sequence (arrow) following amplification by PCR. Lane 1 is the ifnKDEL sequence (targeting to the ER). Lane 2 is the ifnSTOP sequence (targeting to the apoplast). MW = molecular weight standards.
FIG. 34 shows the electrophoretic separation of amplified Human Ιίηβ coding sequence cloned into E coli DH5a, using the CE-K expression cassette. Positive clones were selected by PCR analysis of the inserts using the CaMV35S forward and the Terminator reverse primers (see Figure 29). Lanes 1-7 are positive clones showing the CE-ifn-STOP insert. Lane "fx" is the positive control CE-fx-his, without the ifn insert. Lane "-DNA" is a negative control PCR reaction without DNA.
FIG. 35 shows the electrophoretic separation of amplified Human Ιίηβ coding sequence cloned into E coli DH5a, using the CE-K expression cassette. Positive clones were selected by PCR analysis of the inserts using the CaMV35S+Omega forward and the OCS Terminator reverse primers (see Figure 37). Lanes 1-4 and 6 are positive clones showing the CE-ifn-KDEL insert. Lane 5 is a clone not expressing Human Γίηβ. M = molecular weight standards.
FIG. 36 shows the electrophoretic separation of restriction analysis products of the ifh-positive clones. The left panel shows the electrophoretic separation of restriction analysis products of the positive clones bearing CE-ifn-STOP and CE-ifn-KDEL inserts (arrow), using the restriction enzymes EcoRI+Sall (lanes 1 -5). Lane 1 is CE-ifh-KDEL-positive clone 1 (see FIG. 35) digested with EcoRI+Sall. Lane 2 is CE-ifn-KDEL-positive clone 2 (see FIG. 35) digested with EcoRI+SalI._Lane 3 is CE-ifn-STOP-positive clone 1 (see FIG. 34) digested with EcoRI+Sall. Lane 4 is CE-ifn-STOP-positive clone 2 (see FIG. 34) digested with EcoRI+Sall. Lane 5 is CE-Fx (lacking the "ifn" insert) digested with EcoRI+Sall. M = molecular weight standards. The right panel shows the electrophoretic separation of restriction analysis products of the positive clones bearing CE-ifn-STOP and CE-ifn-KDEL inserts (arrow), using the restriction enzymes Kpnl+Xbal (lanes 6-9). Lane 6 is CE-ifn-KDEL-positive clone 1 (see FIG. 35) digested with Kpnl+Xbal. Lane 7 is CE-ifn-KDEL-positive clone 2 (see FIG. 35) without restriction enzyme digestion. Lane 8 is CE-ifn-STOP-positive clone 1 (see FIG. 34) without restriction enzyme digestion. Lane 9 is CE-ifn-STOP-positive clone 1 (see FIG. 34) digested with Kpnl+Xbal. M = molecular weight standards.
FIG. 37 shows the ligated CE-ifn-KDEL construct, comprising the Human Ιίηβ coding sequence ligated between the CaMV35S+Omega and OCS Terminator sequences. Location of the recognition sites for restriction enzyme is marked.
FIG. 38 is a map of the pzp 11 1 binary vector used for preparation of the pzp-ifn-KDEL and pzp-ifn-STOP plasmids, with the restriction enzyme recognition sites marked.
FIG. 39 is a Western blot showing the immune detection of recombinant Human Ιίηβ expressed in carrot cell clones transformed with agrobacterium LB4404 bearing the pzp-ifn-KDEL and pzp-ifn-STOP plasmids. Calli were grown from the transformed cells in agar with antibiotic selection, and then transferred to individual plates for three months. Cellular contents of the transformed calli (lanes 1-10) were extracted and separated on PAGE, blotted, and the recombinant human ίηίβ detected with affinity purified rabbit anti-iterferonp antibodies. MW = molecular weight standards. St= positive control: 3ng recombinant Human interferon β expressed in CHO cells.
FIG. 40 shows the electrophoretic separation of infectious bursal disease virus viral protein 2 (VPII) coding sequence (arrow) following amplification by PCR. Lanes 1, 2 and 3 are the VPII sequence. Lanes 4 and 5 are negative control PCR reactions, without DNA and without polymerase, respectively. MW1 is λΗΕ molecular weight standards, and MW2 is lbp ladder molecular weight standards.
FIG. 41 shows the electrophoretic separation of amplified VPII coding sequence cloned into E coli DH5a, using the CE-K expression cassette. Positive clones were selected by PCR analysis of the inserts using the CaMV35S+Omega forward and the OCS Terminator reverse primers (see Figure 37). Lanes 1-6 are the tested clones. Lanes 2, 3 and 5 show positive clones with the VPII insert. Lane 7 is a positive control: PCR product of VPIII. Lane 8 is PCR products with DNA of an empty CE cassette. Lanes 9 and 10 are negative control PCR reactions, without DNA and without polymerase, respectively. M = molecular weight standards.
FIG. 42 is a map of the CE binary vector used for preparation of the CE-VPII plasmids, with the restriction enzyme recognition sites marked.
FIG. 43a and 43b are a PAGE analysis (43A) and Western blot (43B) showing electrophoretic separation and immune detection of recombinant VPII expressed in carrot cell clones transformed with agrobacterium LB4404 bearing the pGA492-CE-VPII plasmid. Calli were grown from the transformed cells in agar with antibiotic selection, and then transferred to individual plates for three months. Cellular contents of the transformed calli (lanes 2,3,5,6,7,10,11,13,14, and 15) were extracted and separated on PAGE, blotted, and the recombinant VPII detected with chicken anti-IBDV antibodies (Figure 43b). + = Positive controls (VPII protein). Lanes 1 and 9 are VPII cell suspension (a mixture of transformation events). Lanes 4 and 12 are negative control cells transformed with the "empty" vector alone, and lanes 8 and 16 are the contents of untransformed carrot cells.
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS The present invention is of a device, system and method for axenically culturing and harvesting cells and/or tissues, including bioreactors and fermentors. The device is preferably disposable but nevertheless may be used continuously for a plurality of consecutive culturing/harvesting cycles prior to disposal of same. This invention also relates to batteries of such devices which may be used for large-scale production of cells and tissues.
According to preferred embodiments of the present invention, the present invention is adapted for use with plant cell culture, as described above.
Preferably, the culture features cells that are not assembled to form a complete plant, such that at least one biological structure of a plant is not present. Optionally and preferably, the culture may feature a plurality of different types of plant cells, but preferably the culture features a particular type of plant cell. It should be noted that optionally plant cultures featuring a particular type of plant cell may be originally derived from a plurality of different types of such plant cells. Plant cell cultures suitable for use with the devices and methods of the present invention include, but are not limited to, plant cell cultures derived from plant root cells, alfalfa cells, tobacco cells, and tobacco cell line cells. As used herein, tobacco cell line cells are defined as tobacco cells that have been grown in culture as cells previous to being culturing according to the methods of the present invention. Non-limiting examples of established tobacco cell lines are Nicotiana tabacum L. cv Bright Yellow-2 (BY-2) and Nicotiana tabacum L. cv. Petit Havana.
The plant cell may optionally be any type of plant cell but is optionally and preferably a plant root cell (i.e. a cell derived from, obtained from, or originally based upon, a plant root), more preferably a plant root cell selected from the group consisting of, a celery cell, a ginger cell, a horseradish cell and a carrot cell. As described hereinabove, and detailed in the Examples section below, the plant root cell may be an Agrobacterium rhizogenes transformed root cell. Optionally and preferably, the plant cells are grown in suspension. The plant cell may optionally also be a plant leaf cell or a plant shoot cell, which are respectively cells derived from, obtained from, or originally based upon, a plant leaf or a plant shoot.
In a preferred embodiment, the plant root cell is a carrot cell. It should be noted that the transformed carrot cells of the invention are preferably grown in suspension. As mentioned above and described in the Examples, these cells were transformed with the Agrobacterium tumefaciens cells. According to a preferred embodiment of the present invention, any suitable type of bacterial cell may optionally be used for such a transformation, but preferably, an Agrobacterium tumefaciens cell is used for infecting the preferred plant host cells described below.
It will be appreciated, by one of ordinary skill in the art, that transformation of host cells with Agrobacterium tumefaciens cells can render host cells growing in culture in the devices and by methods of the present invention capable of expressing recombinant proteins. In a preferred embodiment, the recombinant proteins are heterologous proteins. In yet another preferred embodiment, the recombinant proteins are viral, eukaryotic and/or prokaryotic proteins. The transformed cell cultures of the present invention can also express chimeric polypeptides. As used herein, chimeric polypeptides are defined as recombinant polypeptides or proteins encoded by polynucleotides having a fused coding sequence(s) comprising coding sequences from at least two individual and non-identical genes. The expressed polypeptide is preferably a eukaryotic, non-plant protein, especially of mammalian origin, and may be selected from antibody molecules, human serum albumin (Dugaiczyk et al. (1982) PNAS USA 79: 71-75(incorporated herein by reference), erythropoietin, other therapeutic molecules or blood substitutes, proteins within enhanced nutritional value, and may be a modified form of any of these, for instance including one or more insertions, deletions, substitutions and/or additions of one or more amino acids. (The coding sequence is preferably modified to exchange codons that are rare in the host species in accordance with principles for codon usage.). Examples of such heterologous proteins that can be expressed in host cells grown in the devices and by the methods of the present invention include, but are not limited to lysosmal enzymes such as glucocerebrosidase, cytokines and growth factors such as human interferon , serum proteins such as clotting factors, e.g. human coagulation factor X, bacterial and viral proteins, such as VPII.
According to preferred embodiments of the present invention, there is provided a device for plant cell culture, comprising a disposable container for culturing plant cells. The disposable container is preferably capable of being used continuously for at least one further consecutive culturing/harvesting cycle, such that "disposable" does not restrict the container to only a single culturing/harvesting cycle. More preferably, the device further comprises a reusable harvester comprising a flow controller for enabling harvesting of at least a desired portion of the medium containing cells and/or tissues when desired, thereby enabling the device to be used continuously for at least one further consecutive culturing/harvesting cycle. Optionally and preferably, the flow controller maintains sterility of a remainder of the medium containing cells and/or tissue, such that the remainder of the medium remaining from a previous harvested cycle, serves as inoculant for a next culture and harvest cycle.
According to optional embodiments of the present invention, the device, system and method of the present invention are adapted for mammalian cell culture, preferably for culturing mammalian cells in suspension. One of ordinary skill in the art could easily adapt the protocols and device descriptions provided herein for mammalian cell culture.
In one preferred embodiment, the host cell of the invention may be a eukaryotic or prokaryotic cell.
In a preferred embodiment, the host cell of the invention is a prokaryotic cell, preferably, a bacterial cell. In another embodiment, the host cell is a eukaryotic cell, such as a plant cell as previously described, or a mammalian cell.
Disclosed and described, it is to be understood that this invention is not limited to the particular examples, process steps, and materials disclosed herein as such process steps and materials may vary somewhat. It is also to be understood that the terminology used herein is used for the purpose of describing particular embodiments only and not intended to be limiting since the scope of the present invention will be limited only by the appended claims and equivalents thereof.
Throughout this specification and the claims which follow, unless the context requires otherwise, the word "comprise", and variations such as "comprises" and "comprising", will be understood to imply the inclusion of a stated integer or step or group of integers or steps but not the exclusion of any other integer or step or group of integers or steps.
It must be noted that, as used in this specification and the appended claims, the singular forms "a", "an" and "the" include plural referents unless the content clearly dictates otherwise.
The following examples are representative of techniques employed by the inventors in carrying out aspects of the present invention. It should be appreciated that while these techniques are exemplary of preferred embodiments for the practice of the invention, those of skill in the art, in light of the present disclosure, will recognize that numerous modifications can be made without departing from the spirit and intended scope of the invention.
EXAMPLE 1 ILL USTRA TIVE DEVICE The principles and operation of the present invention may be better understood with reference to the drawings and the accompanying description. Figures 1 -9 show schematic illustrations of various exemplary embodiments of the device according to the present invention.
It should be noted that the device according to the present invention, as described in greater detail below, may optionally feature all components during manufacture and/or before use. Alternatively, such components may be generated at the moment of use by conveniently combining these components. For example, any one or more components may optionally be added to the device to generate the complete device at the moment of use.
Referring now to the drawings, Figures 1, 2, and 3, correspond respectively to a first, second and third embodiments of the device, the device, generally designated (10), comprises a transparent and/or translucent container (20), having a top end (26) and a bottom end (28). The container (20) comprises a side wall (22) which is preferably substantially cylindrical, or at least features a rounded shape, though other shapes such as rectangular or polyhedral, for example, may also be suitable. Preferably, the bottom end (28) is suitably shaped to minimize sedimentation thereat. For example, in the first embodiment, the bottom end (28) is substantially frustro-conical or at least comprises upwardly sloping walls. In the second embodiment, the bottom end (28) comprises one upwardly sloping wall (29). In the third embodiment, the bottom end (28) is substantially cylindrical or alternatively convex. The aforementioned configurations of the bottom end (28), in conjunction with the location of the outlet (76) (hereinafter described) near the bottom end (28), enables air supplied via outlet (76) to induce a mixing motion to the container contents at the bottom end (28) which effectively minimizes sedimentation thereat. Nevertheless, the bottom end may be substantially flat in other erribodiments of the present invention. The container (20) comprises an internal fillable volume (30) which is typically between 5 and 50 liters, though device (10) may alternatively have an internal volume greater than 50 liters or less than 5 liters. Internal volume (30) may be filled with a suitable sterile biological cell and/or tissue culture medium (65) and/or axenic inoculant (60) and/or sterile air and/or required other sterile additives such as antibiotics or fungicides for example, as hereinafter described. In the aforementioned embodiments, the container (20) is substantially non-rigid, being made preferably from a non-rigid plastics material chosen from the group comprising polyethylene, polycarbonate, a copolymer of polyethylene and nylon, PVC and EVA, for example. Optionally, the container (20) may be made from a laminate of more than one layer of materials.
As shown for the third embodiment in FIG. 3, the container (20) may optionally comprise two concentric outer walls (24) to enhance mechanical strength and to minimize risk of contamination of the contents via the container walls.
In the first, second and third embodiments, device (10) is for aerobic use.
Thus the container (20) further comprises at least one air inlet for introducing sterile air in the form of bubbles (70) into culture medium (65) through at least one air inlet opening (72). In the aforementioned embodiments, air inlet comprises at least one pipe (74) connectable to a suitable air supply (not shown) and extending from inlet opening (72) to a location inside container (20) at a distance dl from the bottom of bottom end (28), wherein dl may be typically around 1 cm, though it could be greater or smaller than 1 cm. The pipe (74) may be made from silicon or other suitable plastic material and is preferably flexible. The pipe (74) thus comprises an air outlet (76) of suitable diameter to produce air bubbles (70) of a required mean diameter. These bubbles not only aerate the medium (65), but also serve to mix the contents of the container, thereby minimizing sedimentation at the bottom end (28) as well, as hereinbefore described. The size of the bubbles delivered by the air inlet will vary according to the use of the device, ranging from well under 1 mm to over 10 mm in diameter. In some cases, particularly relating to plant cells, small bubbles may actually damage the cell walls, and a mean bubble diameter of not less than 4 mm substantially overcomes this potential problem. In other cases, much smaller bubbles are beneficial, and a sparger may be used at the air outlet (76) to reduce the size of the bubbles. In yet other cases air bubbles of diameter 10 mm or even greater may be optimal. Optionally, outlet (76) may be restrained in position at bottom end (28) through of a tether (not shown) or other means known in the art.
In other embodiments, device (10) is for anaerobic use, and thus does not comprise the air inlet.
In fourth and fifth embodiments of the present invention, and with reference to FIGS. 5 and 6 respectively, the device (10) also comprises a transparent and/or translucent container (20), having a top end (26) and a bottom end (28). The container (20) comprises a side wall (22) which is preferably substantially rectangular in cross-section, having a large length to width aspect ratio, as shown for the fourth embodiment of the present invention (FIG. 5). Thus, the container (20) of the fourth embodiment is substantially box-like, having typical height-length-width dimensions of 130 cm by 70 cm by 10 cm, respectively. The height to length ratio of the device is typically between, for example, about 1 and about 3, and preferably about 1.85. The height-to-width ratio of the device is typically between 5 and about 30, and preferably about 13.
Alternatively, and as shown in FIG. 6 with respect to the fifth embodiment of the present invention, the sidewall (22) may comprise a substantially accordion-shaped horizontal cross-section, having a series of parallel crests (221) intercalated with troughs (222) along the length of the container (20), thereby defining a series of adjacent chambers (223) in fluid communication with each other. Optionally, the sidewall (22) of the fifth embodiment may further comprise a plurality of vertical webs (224), each internally joining pairs of opposed troughs, thereby separating at least a vertical portion of each chamber (223) from adjacent chambers (223). The webs (224) not only provide increased structural integrity to the container (20), but also effectively separate the container (20) into smaller volumes, providing the advantage of enhanced circulation. In other words, the effectiveness of air bubbles in promoting cell circulation is far higher in smaller enclosed volumes than in a larger equivalent volume. In fact, a proportionately higher volume flow rate for the air bubbles is required for promoting air circulation in a large volume than in a number of smaller volumes having the same combined volume of medium. In the fourth and fifth embodiments, bottom end (28) is substantially semi-cylindrical or may be alternatively convex, substantially flat, or any other suitable shape. In the fourth and fifth embodiments, the container (20) comprises an internal fillable volume (30) which is typically between 10 and 100 liters, though device (10) may alternatively have an internal volume greater than 100 liters, and also greater than 200 liters. Internal volume (30) may be filled with a suitable sterile biological cell and/or tissue culture medium (65) and/or axenic inoculant (60) and/or sterile air and/or required other sterile additives such as antibiotics or fungicides for example, as hereinafter described. In the aforementioned fourth and fifth embodiments, the container (20) is substantially non-rigid, being made preferably from a non-rigid plastics material chosen from the group comprising polyethylene, polycarbonate, a copolymer of polyethylene and nylon, PVC and EVA, for example, and, optionally, the container (20) may be made from a laminate of more than one layer of materials.
As for the first, second and third embodiments, device (10) of the fourth and fifth embodiments is also for aerobic use. In the fourth and fifth embodiments, the container (20) further comprises at least one air inlet for introducing sterile air in the form of bubbles (70) into culture medium (65) through a plurality of air inlet openings (72). In the fourth and fifth embodiments, air inlet comprises at least one air inlet pipe (74) connectable to a suitable air supply (not shown) and in communication with a plurality of secondary inlet pipes (741), each secondary inlet pipe (741) extending from inlet opening (72) to a location inside container (20) at a distance dl from the bottom of bottom end (28), wherein dl may be typically around 1 cm, though it could be greater or smaller than 1 cm. The plurality of inlet openings (72), are horizontally spaced one from another by a suitable spacing d5, typically between about 5 cm and about 25 cm, and preferably about 10 cm. The at least one air inlet pipe (74) and secondary inlet pipes (741) may be made from silicon or other suitable plastic material and is preferably flexible. Each of secondary inlet pipes (741) thus comprises an air outlet (76) of suitable diameter to produce air bubbles (70) of a required mean diameter. These bubbles not only aerate the medium (65), but also serve to mix the contents of the container, thereby minimizing sedimentation at the bottom end (28) as well, as hereinbefore described. The size of the bubbles delivered by the air inlet will vary according to the use of the device, ranging from well under 1 mm to over 10 mm in diameter. In some cases, particularly relating to plant cells, small bubbles may actually damage the cell walls, and a mean bubble diameter of not less than 4 mm substantially overcomes this potential problem. In other cases, much smaller bubbles are beneficial, and a sparger may be used at least one of air outlets (76) to reduce the size of the bubbles. In yet other cases air bubbles of diameter 10 mm or even greater may be optimal. Optionally, each outlet (76) may be restrained in position at bottom end (28) by using a tether (not shown) or by another mechanism known in the art.
The fourth and fifth embodiments of the present invention are especially adapted for processing relatively large volumes of inoculant.
In all the aforementioned embodiments, the air inlet optionally comprises a suitable pressure gauge for monitoring the air pressure in the container (20). Preferably, pressure gauge is operatively connected to, or alternatively comprises, a suitable shut-off valve which may be preset to shut off the supply of air to the container (20) if the pressure therein exceeds a predetermined value. Such a system is useful in case of a blockage in the outflow of waste gases, for example, which could otherwise lead to a buildup of pressure inside the container (20), eventually bursting the same.
The container (20) further comprises at least one gas outlet for removing excess air and/or waste gases from container (20). These gases collect at the top end (26) of the container (20). The gas outlet may comprise a pipe (90) having an inlet (96) at or near the top end (26), at a distance d4 from the bottom of the bottom end (28), wherein d4 is typically 90 cm for the first, second and third embodiments, for example. The pipe (90) may be made from silicon or other suitable plastic material and is preferably flexible. Pipe (90) is connectable to a suitable exhaust (not shown) by a known mechanism. The exhaust means further comprises a blocker, such as a suitable one-way valve or filter (typically a 0.2 micro-meter filter), for example, for substantially preventing introduction of contaminants into container via the gas outlet. At least a portion of the top end (26) may be suitably configured to facilitate the collection of waste gases prior to being removed via inlet (96). Thus, in the first and second embodiments, the upper portion of the top end (26) progressively narrows to a minimum cross sectional area near the location of the inlet (96). Alternatively, at least the upper portion of the top end (26) may be correspondingly substantially frustro-conical or convex. In the fourth and fifth embodiments, the top end (26) may be convex, or relatively flat, for example, and the inlet (96) may be conveniently located at or near a horizontal end of the top end (26).
The container (20) further comprises an additive inlet for introducing inoculant and/or culture medium and/or additives into container. In the aforementioned embodiments, the additive inlet comprises a suitable pipe (80) having an outlet (86) preferably at or near the top end (26), at a distance d3 from the bottom of the bottom end (28), wherein d3 for the first embodiment is typically approximately 68 cm, for example. The pipe (80) may be made from silicon or other suitable plastic material and is preferably flexible. Pipe (80) is connectable by a known connector to a suitable sterilized supply of inoculant and/or culture medium and/or additives. The additive inlet further comprises a blocker for substantially preventing introduction of contaminants into container via additive inlet, and comprises, in these embodiments, a suitable one-way valve or filter (84). Typically, the level of contents of the container (20) remains below the level of the outlet (86).
The container (20) further comprises reusable harvester for harvesting at least a desired first portion of the medium containing cells and/or tissue when desired, thereby enabling the device to be used continuously for at least one subsequent culturing cycle. A remaining second portion of medium containing cells and/or tissue serves as inoculant for a next culture and harvest cycle, wherein culture medium and/or required additives provided. The harvester may also be used to introduce the original volume of inoculant into the container, as well as for enabling the harvested material to flow therethrough and out of the container.
In the aforementioned embodiments, the harvester comprises a pipe (50) having an inlet (52) in communication with internal volume (30), and an outlet (56) outside container (20). The pipe (50) may be made from silicon or other suitable plastic material and is preferably flexible. The pipe (50) is of a relatively large diameter, typically about 2 cm, since the harvested cell and/or tissue flow therethrough may contain clumps of cell particles that may clog narrower pipes. Preferably, inlet (52) is located near the bottom end (28) of the container (20), so that only the container contents above inlet (52) are harvested. Thus, at the end of each harvesting cycle, a second portion of medium containing cells and/or tissues automatically remains at the bottom end (28) of the container (20), up to a level below the level (51) of the inlet (52), which is at a distance d2 from the bottom of bottom end (28). Typically but not necessarily, d2 is about 25 cm for the first embodiment.
Optionally and preferably, d2 is selected according to the volume of container (20), such that the portion of medium and cells and/or tissue that remains is the desired fraction of the volume of container (20). Also optionally and preferably, an additional sampling port may be provided (not shown) for removing a sample of the culture media containing cells and/or tissue. The sampling port preferably features an inlet and pipe as for the harvester, and is more preferably located above the harvester. Other port(s) may also optionally be provided.
Alternatively, inlet (52) may be located at the lowest point in the container (20), wherein the operator could optionally manually ensure that a suitable portion of medium containing cells and/or tissue could remain in the container (20) after harvesting a desired portion of medium and cells and/or tissue. Alternatively, all of the medium could optionally be removed. Harvester further comprises flow controller such as a suitable valve (54) and/or an aseptic connector (55) for closing off and for permitting the flow of material into or out of container (20) via harvester. Typically, aseptic connector (55) is made from stainless steel, and many examples thereof are known in the art. Preferably, the harvester further comprises contamination preventer for substantially preventing introduction of contaminants into container via harvester after harvesting.
In the first, second, third, fourth and fifth embodiments, contamination preventer comprises a fluid trap (300). The fluid trap (300) is preferably in the form of a substantially U-shaped hollow tube, one arm of which is mounted to the outlet (56) of the harvester, and the other arm having an external opening (58), as shown for the first embodiment, for example, in FIG. 1(b). Harvested cells/tissue may flow out of the device (10) via harvester, fluid trap (300) and opening (58), to be collected thereafter in a suitable receiving tank as hereinafter described. After harvesting is terminated, air could possibly be introduced into the harvester via opening (56), accompanied by some back-flow of harvested material, thereby potentially introducing contaminants into the device. The U-tube (300) substantially overcomes this potential problem by trapping some harvested material, i.e., cells/tissues, downstream of the opening (56) thereby preventing air, and possible contaminants, from entering the harvester. Once the harvester is closed off via valve (54), the U-tube (300) is removed and typically sterilized for the next use or discarded. The U-tube (300) may be made from stainless steel or other suitable rigid plastic materials. In the aforementioned embodiments, remaining second portion of medium containing cells and/or tissue typically comprises between 10% and 20% of the original volume of culture medium and inoculant, though second portion may be greater than 20%, up to 45% or more, or less than 10%, down to 2.5% or less, of the original volume, if required.
Device (10) optionally further comprises an attacher for attaching same to an overhanging support structure. In the aforementioned embodiments, support structure may comprise a bar (100) (FIGS. 1 , 2, 5) or rings (not shown). In the third embodiment, the attacher may comprise a hook (25) preferably integrally attached to the top end (26) of the container (20). Alternatively, and as shown for the first and second embodiments in FIGS. 1 and 2 respectively, the attacher may comprise a preferably flexible and substantially cylindrical loop (27) of suitable material, typically the same material as is used for the container (20), either integral with or suitably attached (via fusion welding, for example) to the top end (26) of the device. Alternatively, and as shown for the fourth embodiment in FIG. 5, attacher may comprise a preferably flexible and substantially cylindrical aperture (227) made in the sidewall (22) of container (20), extending through the depth thereof. The fifth embodiment may optionally be supported by a series of hooks (not shown) integrally or suitably attached preferably to the top end (26) of the device (10).
Optionally, the containers may be supported in a suitable support jacket. For example, in the fourth embodiment, the device (10) may be supported in a support jacket consisting of a suitable outer support structure comprising an internal volume sized and shaped to complement the datum external geometry of at least the sidewall (22) and bottom end (28) of the device when nominally inflated. The' outer support structure may be substantially continuous, with openings to allow access to the inlets and outlets to the device (10), and further has a suitable door or opening either at the side, top or bottom to allow a device (10) to be inserted into the support jacket or removed therefrom. The datum geometry of the device may be defined as the shape of the device (10) when it is inflated to its design capacity. At this point, its shape is nominally is design shape, and therefore its internal volume is nominally its design volumetric capacity. However, when such a device comprising flexible walls is actually filled with a liquid medium, the geometry of the device tends to deviate from the datum geometry, tending to bulge preferentially at the bottom the device where the pressure is greatest, and increasing stresses in the wall material considerably. A support jacket as described for example and having the required structural attributes also helps in maintaining the geometry of the device, and reduces the wall stresses, minimizing risk of rupture of the sidewall (22), for example and thereby ensuring a longer working life for each device.
Alternatively, the containers may be supported in a suitable support structure. For example, in the fourth and fifth embodiments of the present invention, the device (10) may be supported in a support structure (400) comprising a pair of opposed frames (405), (406), as illustrated, for example, in FIG. 9. Each frame (405), (406) is typically rectangular comprising substantially parallel and horizontal upper and lower load-carrying members (410) and (420) respectively, spaced by a plurality of substantially parallel vertical support members (430), at least at each longitudinal extremity of the load-carrying members (410), (420), and integrally or otherwise suitably joined to the upper and lower load-carrying members, (410) and (420) respectively. The lower support member (420) of each frame (405) and (406) comprises suitably shaped lower supports adapted for receiving and supporting a corresponding portion of the bottom end (28) of the containers (20). Typically, the lower supports may take the form of a suitably shaped platform projecting from each of the lower support-members (420) in the direction of the opposed frame. Alternatively, the lower supports may take the form of a plurality of suitably shaped tabs (460) projecting from each of the lower support members (420) in the direction of the opposed frame. The frames (405), (406) are spaced from each other by strategically located spacing bars (450), such that the container (20) may be removed relatively easily from the support structure (400) and a new container (20) maneuvered into place, i.e., without the need to dismantle the support frame (400). The spacing bars (450) may be integrally connected to the frames (405), (406), as by welding for example. Preferably, though, the spacing bars (450) are releasably connected to the frames (405), (406), such that the frames (405), (406) may be separated one from the other, and also permitting the use of different sized spacing bars to connect the frames (405), (406), thereby enabling the support structure (400) to be used with a range of containers (20) having different widths. Optionally, and preferably, the frames (405), (406) each comprise at least one interpartitioner (470). Interpartitioner (470) may take the form of a vertical web projecting from each frame (405), (406) in the direction of the opposed frame, and serves to push against the sidewall (22) at a predetermined position, such that opposed pairs of interpartitioner (470) effectively reduce the width of the container (20) at the predetermined position, thereby creating, between adjacent opposed pairs of interpartitioner (470), for example, a partitioning or semi partitioning of the internal space (30) of the container (20). Thus, the interpartitioner (470) may typically deform the sidewall (22) of a container (20) according to the fourth embodiment (see FIG. 5) to a shape resembling that of the sidewall (22) of the fifth embodiment (see FIG. 6). Of course, when used with a container (20) according to the fifth embodiment of the present invention, the interpartitioner (470) are located on the frames (405), (406) such as to engage with the troughs (222) of the sidewall (22), and thus particularly useful in maintaining the shape of the containers (20). Thus, adjacent partitioner (470) on each frame are spaced advantageously spaced a distance (d5) one from another. Preferably, interpartitioner (470) comprise suitable substantially vertical members (472) spaced from the upper and lower support members, (410), (420), in a direction towards the opposed frame with suitable upper and lower struts (476), (474) respectively. The support structure F(400) thus not only provides structural support for the containers (20), particularly of the fourth and fifth embodiments, it also provides many open spaces between each of the load carrying members for enabling each of the air inlet, the gas outlet, the harvester and the additive inlet to pass therethrough. Optionally, support structure (400) may comprise rollers or castors (480) for easing transportation of the containers (20) within a factory environment, for example.
The container (20) may optionally be formed by fusion bonding two suitable sheets of suitable material, as hereinbefore exampled, along predetermined seams. Referring to the first and second embodiments for example, two sheets (200) of material may be cut in an approximately elongated rectangular shape and superposed one over the other, FIG. 4. The sheets are then fusion bonded together in a manner well known in the art to form seams along the peripheries (205) and (206) of the two longer sides, and along the periphery of one of the shorter ends (210), and again parallel and inwardly displaced thereto to form a seam (220) at the upper end of the container (20). The fusion weld seams (207) and (208) along the long sides and situated between these parallel short end seams (210) and (220) may be cut off or otherwise removed, effectively leaving a loop of material (27). The bottom end (28) of the container (20) is formed by fusion bonding the remaining short end of the sheets along two sloping seam lines, (230) and (240), mutually converging from the seams (205) and (206) of the long sides. Optionally, the two sloping seam lines (230) and (240) may be joined above the apex by another fusion welded seam line (260) approximately orthogonal to the long side seams (205) and (206). Prior to fusion welding the two sheets together, rigid plastic bosses (270), (290), (280) and (250) may be fusion welded at locations corresponding to the air inlet, gas outlet, additive inlet and harvester, respectively. These bosses provide suitable mechanical attachment points for each of the corresponding input(s) and output(s). The third, fourth and fifth embodiments of the present invention may be manufactured in a similar manner to the first and second embodiments, substantially as described above, mutatis mutandis.
In all embodiments, the device (10) is made from a material or materials that are biologically compatible and which enable the container to be sterilized prior to first use.
EXAMPLE 2 ILL USTRA TJVE SYSTEM The present invention also relates to a battery of disposable devices for axenically culturing and harvesting cells and/or tissue in cycles, wherein each of a plurality of these devices is structurally and operationally similar to device (10), hereinbefore defined and described with reference to the first through the fifth embodiments thereof.
Referring to FIG. 10, a battery (500) comprises a plurality of devices (10), as hereinbefore described with respect to any one of the first tlirough the fifth embodiments, which are held on a frame or frames (not shown) with an attacher or support structure (400), for example. Typically, the battery (500) may be divided into a number of groups, each group comprising a number of devices (10).
In the preferred embodiment of the battery (500), the air inlets of the devices (10) in each group are interconnected. Thus the air inlet pipes (74) of each device (10) of the group are connected to common piping (174) having a free end (170), which is provided with an aseptic connector (175). Sterilized air is provided by a suitable air compressor (130) having a suitable sterilizer or blocker (110) such as one or more filters. The compressor (130) comprises a delivery pipe (101) having an aseptic connector (176) at its free end which is typically connectable to the aseptic connector (175) located at the free end of common piping (174). This connection is made at the beginning of each run of growth/harvesting cycles in a mobile sterile hood (380) to ensure that sterile conditions are maintained during the connection.
The sterile hood (380) provides a simple relatively low-cost system for connecting , the various services, such as air, media, inoculant and harvested cells, to and from the group of devices (10) under substantially sterile conditions. Similarly, at the end of each run of growth/harvesting cycles, the connectors (175) and (176) are disconnected in the sterile hood (380), and the used devices are discarded, allowing the connector (175) at the compressor end to be connected to the connector (176) of a new group of devices. Sterilized air is typically provided continuously, or alternatively in predetermined pulses, during each culturing cycle.
In the preferred embodiment of the battery (500), excess air and/or waste gases from each of the devices (10) is removed to the atmosphere via common piping (290) suitably connected to each corresponding gas outlet (90). Common piping (290) is provided with a suitable contaminant preventer (210), such as one or more filters, for preventing contaminants from flowing into devices (10). Alternatively, the gas outlet (90) of each device (10) may be individually allowed to vent to the atmosphere, preferably via suitable filters which substantially prevent contaminants from flowing into the device (10).
Media and additives are contained in one or more holding tanks (340). For example, micro elements, macro elements and vitamins may be held in different tanks, while additives such as antibiotics and fungicides may also held in yet other separate tanks. A pumper (345) serving each tank enable the desired relative proportions of each component of the media and/or additives to be delivered at a predetermined and controllable flow rate to a static mixer (350), through which water—either distilled or suitably filtered and purified—flows from a suitable supply (360), preferably with the aid of a suitable pumper (365) (FIG. 10). By adjusting the flow rates of pumpers (345) and (365), for example, the concentration of media as well as additives available to be delivered into devices (10) may be controlled. Media and/or additives mixed with water may then be delivered from the static mixer (350) under sterile conditions via a filter (310) and a delivery pipe (370) having an aseptic connector (375) as its free end (390).
In the preferred embodiment of the battery (500), the inlet of additive pipe (80) of each corresponding device (10) in the group of devices, are interconnected via common piping (180), which comprises at its free end a common aseptic connector (376). Common aseptic connector (376) may then be connected, in the sterile hood (380), to the aseptic connector (375) at the free end (390) of the media and additive pipe (370), thus enabling each device (10) of the battery, or of the group, to be supplied with media and additives. At the end of the life of the devices (10), and prior to discarding the same, the aseptic connectors (375) and (376) are disconnected n the sterile hood. The aseptic connector (375) is then ready to be connected to the new aseptic connector (376) of the next sterilized group of new devices (10) of the battery, ready for the next run of culturing/harvesting cycles.
The sterile hood (380) may also optionally be used for connecting the media/additives tank (350) to each one of a number of groups of devices (10) in the battery, in turn, during the useful lives of the devices in these groups. Thus, when one group of devices has been serviced with media/additives, the aseptic connector (376) of this group is aseptically sealed temporarily in the sterile hood (380), which is then moved to the next group of devices where their common aseptic connector (376) is connected to the sterile connector (375) of the pipe (370), thus enabling this group of devices to be serviced with media/additives.
In a different embodiment of the battery (500), a mobile sterile hood (380) may be used to connect together the free end (390) of a preferably flexible delivery pipe connected to static mixing tank (350), to the additive inlet of each device (10) in turn. The sterile hood (380) may then be moved from one device (10) to the next, each time the end (390) being connected to the inlet end of the corresponding pipe (80) to enable media to be provided to each device in turn. The sterile hood (380), together with aseptic connector, preferably made from stainless steel, at end (390) and the inlet of the pipe (80) of the corresponding device (10), respectively, enable each device (10) to be easily connected and subsequently disconnected to the end (390) and thus to the media supply, under sterile conditions. Many other examples of suitable connector for connecting two pipes together are well known in the art. Suitable filters are provided at the end (390) and at the pipe (80), respectively, to prevent or at least minimize potential contamination of the container contents. The sterile hood (380) may thus be automatically or manually moved from device (10) to device (10), and at each device in turn, an operator may connect the device (10) to the media supply using the sterile hood (380), fill the device with a suitable quantity of media and/or additives, and subsequently disconnect the sterile hood (380) from the device, to then move on to the next device. Of course, the end (390) may be adapted to comprise a plurality of connector (375) rather than just a single sterilized connector (375), so that rather than one, a similar plurality of devices (10) having corresponding connector (376) may be connected at a time to the media supply via the trolley (380).
Each time, prior to connecting end (390) to each device or set or group of devices, the corresponding connectors (375) and (376) are typically sterilized, for example through an autoclave.
In yet another embodiment of the battery (500), a single pipe or a set of pipes (not shown) connect static mixer (350), to one device (10) or to a corresponding set of devices (10), respectively, at a time, wherein a conveyor system transports the device (10) or set of devices (10) to the single pipe or set of pipes, respectively, or vice versa. After filling the device (10) or set of devices (10), the conveyor enables a further device (10), or a further set of devices (10) to be connected to the static mixer (350) through the single pipe or set of pipes, respectively.
In the preferred embodiment of the battery (500), the harvesters of each of the devices (10) of the group are interconnected. Thus the harvesting pipes (50) of each device (10) are connected to common harvesting piping (154) having a free end (150), which is provided with an aseptic connector (155). Preferably, each of the harvesting pipes (50) may comprise a valve (54), as hereinbefore described, to close off or permit the flow of harvested cells from each corresponding device (10). Thus, for example, if it is determined that a number of devices in a particular group are contaminated, while the other devices are not, then the cells in these latter devices may be harvested without fear of contamination from the former devices, so long as the valves (54) of the contaminated devices remain closed. Preferably, common piping further comprises a common shut-off valve (259) upstream of the aseptic connector (155). Preferably, a contamination preventer is provided for substantially preventing introduction of contaminants into container via harvester after harvesting.
In the preferred embodiment, the contamination preventer comprises a substantially U-shaped fluid trap (400), having an aseptic connector (156) at one arm thereof, the other arm having an opening (158) in fluid communication with a receiving tank (590). The aseptic connectors (155) and (156) are then interconnected in the mobile sterile hood (380) under sterile conditions. Harvesting is then effected by opening the valves (54) of all the devices in the group which are not contaminated, as well as common valve (259). Cells from the group will then flow into the receiving tank (590), preferably under gravity, though in some cases a suitable pump may be used. After harvesting is completed, the aseptic connectors (155) and (156) may be disconnected in the sterile hood (380), which can then be moved to the next group of devices (10): the corresponding aseptic connector (155) of this group may then be interconnected with aseptic connector (156) of the U-tube (400), and thereby enable the cells of this group of devices to be harvested.
In another embodiment of the battery (500), a single pipe or a set of pipes (not shown) may connect common receiving tank to a device (10) or a corresponding set of devices (10), respectively, at a time, wherein a conveyor system transports the device (10) or set of devices (10) to the single pipe or set of pipes, respectively, or vice versa. After harvesting the device (10) or set of devices (10), the conveyor enables a further device (10) or set of devices (10) to be connected to the- common receiving tank through a single pipe or set of pipes, respectively.
In another embodiment of the battery (500), each device (10) may be individually harvested, wherein the harvester of each device comprises a contamination preventer for substantially preventing introduction of contaminants into container via harvester after harvesting. In this embodiment, the contamination preventer comprises U-shaped fluid trap (400) as hereinbefore described, having an aseptic connector (156) at one arm thereof, the other arm having an opening (158) in fluid communication with a receiving tank (590). The harvester comprises an aseptic connector (55) which may be connected to the aseptic connector (156) of the fluid trap (400) in the mobile sterile hood (380) under sterile conditions. Harvesting is then effected by opening the valve (54) of the device, wherein cells will then flow into the receiving tank, preferably under gravity, though in some cases a suitable pump may be used. After harvesting is completed, these aseptic connectors, (55) and (156), may be disconnected in the sterile hood (380), which can then be moved to the next device (10): the corresponding aseptic connector (55) of the harvester of this device may then be interconnected with aseptic connector (156) of the U-tube (400), and thereby enable the cells of this next device to be harvested.
In the preferred embodiment of the battery (500), the harvester may also be used for initially providing inoculant at the start of a new run of growth/harvesting cycles. Thus, inoculant may be mixed with sterilized medium in a suitable tank having a delivery pipe comprising at its free end an aseptic connector which is connected to the aseptic connector (155) of the common harvesting piping (154) in the sterile hood (380). Inoculant may then be allowed to flow under gravity, or with the aid of a suitable pump, to each of the devices (10) of the group via common harvesting piping (154), after which the aseptic connectors are disconnected in the sterile hood.
Alternatively, the inoculant may be introduced into the devices via the additive inlet, in particular the additive common piping (180), in a similar manner to that hereinbefore described regarding the harvester and the common harvesting piping (155), mutatis mutandis.
According to preferred embodiments of the present invention, the operation of the previously described individual device and/or battery is controlled by a computer (600), as shown with regard to Figure 1 C. The computer is optionally and preferably able to control such parameters of the operation of the battery and/or of a device according to the present invention as one or more of temperature, amount and timing of gas or gas combination entering the container, amount and timing of gas being allowed to exit the container, amount and timing of the addition of at least one - material (such as nutrients, culture medium and so forth), and/or amount of light. The computer may optionally also be able to detect the amount of waste being produced.
The computer is preferably connected to the various measuring instruments present with regard to the operation of the present invention, as an example of a system for automating or semi-automating the operation of the present invention. For example, the computer (600) is preferably connected to a gauge (602) or gauges for controlling the flow of a gas or gas combination. Gauge (602) is preferably connected to a pipe (74) connectable to a suitable air supply (604), and controls the flow of air or other gas(es) to pipe (74).
The computer (600) is also preferably connected to a temperature gauge (606), which is more preferably present in the environment of container (20) but more preferably not within container (20). The computer (600) is also optionally and preferably able to control a mechanism for controlling the temperature (608), such as a heater and/or cooler for example.
The computer (600) is optionally and preferably connected to a gauge (610) for controlling the flow of media and/or other nutrients from a nutrient/media container (612; hereinafter referred to collectively as a nutrient container) to container (20) through pipe (80) of the present invention. Computer (600) may also optionally, additionally or alternatively, control valve (84). Also optionally, only one of valve (84) or gauge (610) is present.
The computer (600) is preferably connected to at least one port of the container, and more preferably (as shown) is connected at least to a harvest port (shown as pipe (50)) and optionally as shown to a sample port (612). Optionally, the sample port and the harvest port may be combined. The computer optionally may control an automated sampler and/or harvester for removing portions of the contents of the container, for testing and/or harvesting (not shown). The computer may also optionally be connected to an analyzer (614) for analyzing these portions of contents, for example in order to provide feedback for operation of the computer.
EXAMPLE 3 ILLUSTRATIVE PLANT CELL CULTURING METHOD The present invention also relates to a method for culturing and harvesting plant cells in a multiple-use disposable device. The device is optionally and preferably configured according to the device and/or system of Examples 1 and 2 above. In this method, plant cells are preferably placed in a container of the device according to the present invention. This container is preferably constructed of plastic, which may optionally be translucent and/or transparent, and which optionally may be rigid or flexible, or may optionally have a degree of rigidity between rigid and flexible (e.g. semi-rigid for example). Any other additional material(s) are then provided, such as sterile gas or a gas combination, and/or a sterile liquid or a liquid combination, or any other suitable additive. Preferably, the device is constructed to feature a reusable harvester, such that material (plant cells and/or one of the previously described additional materials) may be removed while still permitting at least one additional cell culturing/harvesting cycle to be performed. Optionally and more preferably, the plant cells are cultured in suspension.
According to preferred embodiments of the present invention, the plant cells are cultured in suspension in a liquid medium, with at least one sterile gas or gas combination (plurality of gases) added as required. Optionally and preferably, the sterile gas comprises a sterile gas combination which more preferably comprises sterile air. The sterile gas and/or gas combination is preferably added to the container through an air inlet during each cycle, either continuously or in pulses, as previously described.
Sterile culture medium and/or sterile additives are preferably placed in the container through an additive inlet as previously described.
The plant cells (as an example of an axenic inoculant) are optionally and preferably added through the harvester. Optionally and preferably, the plant cells in the container are exposed to light, for example through an external light (a source of illumination external to the container), particularly if the container is transparent and/or translucent.
The cells are allowed to grow to a desired yield of cells and/or the material produced by the cells, such as a protein for example.
According to preferred embodiments, excess air and/or waste gases are preferably allowed to leave the container through a gas outlet, optionally and more preferably continuously and/or intermittently.
Also optionally and preferably, the material in the container (such as the cell culture medium for example) is checked for one or more contaminants and/or the quality of the cells and/or cell product(s) which are produced in the container. More preferably if one or more contaminants are found to be present or the cells and/or cell product(s) which are produced are of poor quality, the device and its contents are disposed of.
At an appropriate time, particularly if contaminant(s) and/or poor quality cells and/or cell product(s) are not found, at least a first portion of the material in the container is preferably harvested, such as medium containing cells and/or cell product(s). More preferably, a remaining second portion of material, such as medium containing cells and/or cell product(s) is allowed to remain in the container, wherein this second portion may optionally serve as inoculant for a next culture/harvest cycle. Next, sterile culture medium and/or sterile additives are provided for the next culture/harvest cycle through the additive inlet.
The previously described cycle is optionally performed more than once. Also, the previously described cycle may optionally be performed with a battery (system) of devices as described with regard to Example 2. Optionally and preferably, the method permits cells to be cultured and/or harvested anaerobically.
For the anaerobic embodiment, a battery (500) of at least one group of devices (10) is provided, wherein the devices do not comprise an air inlet. For at least one device (10) thereof the following process is performed. An axenic inoculant is introduced to device (10) via common harvesting piping. Next, sterile culture medium and/or sterile additives is added to the device via common additive inlet piping. Optionally, the device is illuminated as previously described.
The cells in the device are allowed to grow in medium to a desired yield of cells and/or product(s) of the cells. Optionally and preferably, excess air and/or waste gases are permitted to leave the device, more preferably continuously, via common gas outlet piping.
As for the previous method, the material in the container is monitored for the presence of one or more contaminant(s) and/or poor quality cells and/or poor quality cell product(s), in which case the container and its contents are preferably disposed of. Also as for the previous method, the cells and/or cell product(s) are preferably harvested at a suitable time, for example when a desired amount of cell product(s) has been produced.
The above method may also optionally be performed aerobically in a battery of disposable devices, such that sterile gas and/or combination of gases, such as sterile air, is provided to device via common air inlet piping.
Typically, a water purification system supplies deionised and pyrogen free water to a tank comprising concentrated media, and diluted media is then pumped to the device (10) via additive inlet. Filters, typically 0.2 micrometer, are installed in the feed pipes and also just upstream of the additive inlet to minimize risk of contamination of the container contents in each device (10). Alternatively or additionally, a one-way valve may be also be used to minimize this risk.
For the first culturing cycle of each device (10), inoculant, typically a sample of the type of cell that it is required to harvest in the device (10), is premixed with media or water in a steam sterilized container and is introduced into the device (10) via the harvester. Media is then introduced into the device (10) via additive input. For subsequent cycles, only media and/or additives are introduced, as hereinbefore described.
Typically, an air compressor provides substantially sterilized air to each device (10), via a number of filters: a coarse filter for removing particles, a dryer and humidity filter for removing humidity, and a fine filter, typically 0.2 micro-meter, for removing contaminants. Preferably, another filter just upstream of the air inlet further minimizes the risk of contamination of the container contents.
For each device (10), all connections to the container (20), i.e., to air inlet, to additive inlet, and preferably also to the gas outlet and to the harvester are autoclave sterilized prior to use, and sterility is maintained during connection to peripheral equipment, including, for example, air supply and exhaust by performing the connections in the sterile hood as hereinbefore described.
Temperature control for each device (10) is preferably provided by a suitable air conditioner. Optional illumination of the device may be provided by suitable fluorescent lights suitably arranged around the device (10), when required for cell growth.
During each culturing cycle of each device (10), the contents of each corresponding container (20) are typically aerated and mixed for about 7 to about 14 days, or longer, under controlled temperature and lighting conditions.
At the end of the culturing cycle for each device (10), the corresponding harvester is typically connected to a presterilised 'environment with suitable connectors which are sterilized prior and during connection, as hereinbefore described. Harvesting is then effected, leaving behind between about 2.5% to about 45%, though typically between about 10% to about 20%, of cells and/or tissue to serve as inoculant for the next cycle.
The harvested cells/tissues and/or cell product(s) may then optionally be dried, or extracted, as required.
According to preferred embodiments of the present invention, the process of cell culturing may optionally be adjusted according to one or more of the following. These adjustments are preferably performed for culturing plant cells. According to a first adjustment, for cells being grown in suspension in culture media, the amount of media being initially placed in the container (e.g. on day zero) is preferably at least about 125% of the recommended amount, and more preferably up to about 200% of the recommended amount of media.
Another optional but preferred adjustment is the addition of media during growth of the cells but before harvesting. More preferably, such media is added on day 3 or 4 after starting the culture process. Optionally and more preferably, the media comprises concentrated culture media, concentrated from about 1 to about 10 times and thereby providing a higher concentration of nutrients. It should be noted that preferably a sufficient medium is provided that is more preferably at a concentration of at least about 125% of a normal concentration of medium. Addition of media means that fresh media is added to existing media in the container. When added as a concentrated solution, preferably the resultant media concentration is close to the normal or initial concentration. Alternatively, the media in the container may optionally be completely replaced with fresh media during growth, again more preferably on day 3 or 4 after starting the culture process.
Another optional but preferred adjustment is the use of higher sucrose levels than is normally recommended for plant cell culture, for example by adding sucrose, such that the concentration in the media may optionally be 40g/l rather than 30g/l. One or more other sugars may optionally be added, such as glucose, fructose or other sugars, to complement sucrose. Sucrose (and/or one or more other sugars) is also optionally and preferably added during the cell culture process, more preferably on day 3 or 4 after starting the culture process.
Another optional adjustment is the addition of pure oxygen during the cell culture process, more preferably on day 3 or 4 after starting the culture process.
Another optional adjustment is the use of increased aeration (gas exchange), which as shown in greater detail below, also results in an increased cell growth rate in the device according to the present invention.
EXAMPLE 4 EXPERIMENTAL EXAMPLE WITH VTNCA ROSEA CELLS This experiment was performed with cells from Vinca rosea also known as rose periwinkle.
A group of 10 bioreactors (each a device according to the invention), each with a container made from polyethylene-nylon copolymer, (0.1 mm wall thickness, 20 cm diameter, 1.2 m height), complete with 30 mm ports at 5 cm (for air inlet), 25 cm (for harvester), 68 cm (additive inlet), and 90 cm (gas outlet) from the bottom, effective fillable volume about 10 liters was used. The bioreactors, together with their fittings, were sterilized by gamma irradiation (2.5 mRad).
Nine liters of Schenk & Hildebrandt mineral/vitamin medium, 2 mg/1 each of chlorophenoxy acetic acid and 2,4-dichlorophenoxyacetic acid, 0.2 mg/1 kinetin, 3% sucrose, and 900 ml packed volume initial inoculum of line V24 Catharanthus roseus (Vinca) cells were introduced into each bioreactor. The volume of air above the surface of the medium was 3 1. Aeration was carried out using a flow volume of 1.5 liter/min sterile air, provided through a 4 mm orifice (air inlet), located 1 cm from the bottom of the container.
The bioreactors were mounted in a controlled temperature room (25 ° C) and culturing was continued for 10 days, until the packed volume increased to about 7.5 1 (75% of the total volume; a doubling rate of 2 days during the logarithmic phase). At this time point, cells were harvested by withdrawing 9 liters of medium and cells through the harvester and 9 liters of fresh sterile medium together with the same additives were added via the additive inlet. Cells were again harvested as above at 10-day intervals, for 6 additional cycles, at which time the run was completed.
A total weight of 6.5 kg fresh cells (0.5 kg dry weight) was thus collected over various periods of time, such as seven, ten or fourteen day intervals, from each of the 10 1 capacity bioreactors. These cells had a 0.6% content of total alkaloids, the same as the starting line. Therefore, clearly the device of the present invention was able to maintain and grow the cells in culture in a healthy and productive state, while maintaining similar or identical cell characteristics as for cells from the starting line.
EXAMPLE 5 EXPERIMENTAL EXAMPLE WITH PLANT CELLS Example 5a: Cloning and Large-Scale Expression of Human Glucocerebrosidase in Carrot Cell Suspension This Example provides a description of experiments that were performed with transformed plant cells, cultured in the device of the present invention, according to the method of the present invention.
Materials and Experimental procedures: Plasmid vectors: Plasmid CE-T Plasmid CE-T was constructed from plasmid CE obtained from Prof. Galili [United States Patent 5,367,110 November 22, (1994)].
Plasmid CE was digested with Sail.
The Sail cohesive end was made blunt-ended using the large fragment of DNA polymerase I. Then the plasmid was digested with Pstl and ligated to a DNA fragment coding for the ER targeting signal from the basic endochitinase gene: [Arabidopsis thaliana]ATGAAGACTA ATCTTTTTCT CTTTCTCATC TTTTCACTTC TCCTATCATT ATCCTCGGCC GAATTC (SEQ ID NO: 10), and vacuolar targeting signal from Tobacco chitinase A: GATCTTTTAG TCGATACTAT G (SEQ ID NO: 11) digested with Smal and Pstl.
The Sail cohesive end was made blunt-ended using the large fragment of DNA polymerase I. Then the plasmid was digested with Pstl and ligated to a DNA fragment coding for the ER targeting signal (SEQ ID NO: 1), a non relevant gene, and vacuolar targeting signal (SEQ ID NO: 2), digested with Smal and Pstl. pGREENII was obtained from Dr. P. Mullineaux [Roger P. Hellens et ah, (2000) Plant Mol. Bio. 42:819-832]. Expression from the pGREEN II vector is controlled by the 35S promoter from Cauliflower Mosaic Virus (SEQ ID NO: 9), the TMV (Tobacco Mosaic Virus) omega translational enhancer element and the octopine synthase terminator sequence from Agrobacterium tumefaciens.
CDNA: hGCD - obtained from E. coli containing the human GCD cDNA sequence (GenBank Accession No: M16328)(ATCC Accession No. 65696), as described by Sorge et al (PNAS USA 1985; 82:7289-7293), GC-2.2 [GCS-2kb; lambda-EZZ-gamma3 Homo sapiens] containing glucosidase beta acid [glucocerebrosidase]. Insert lengths (kb): 2.20; Tissue: fibroblast WI-38 cell.
Construction of expression plasmid The cDNA coding for hGCD (SEQ ID NOs: 7 and 8) was amplified using the forward: 5' CAGAATTCGCCCGCCCCTGCA 3'(SEQ ID NO: 3) and the reverse: 5' CTCAGATCTTGGCGATGCCACA 3 '(SEQ ID NO: 4) primers. The purified PCR DNA product was digested with endonucleases EcoRI and BglH (see recognition sequences underlined in the primers) and ligated into an intermediate vector having an expression cassette E-T digested with the same enzymes. The expression cassette was cut and eluted from the intermediate vector and ligated into the binary vector pGREENII using restriction enzymes Smal and Xbal, forming the final expression vector. Kanamycin resistance is conferred by the NPTII gene driven by the nos promoter obtained together with the pGREEN vector (Fig. 1 IB). The resulting expression cassette (SEQ ID NO: 13) is presented by Fig. 11 A.
The resulting plasmid was sequenced to ensure correct in-frame fusion of the signals using the following sequencing primers: 5' 35S promoter: 5' CTCAGAAGACCAGAGGGC 3'(SEQ ID NO: 5), and the 3' terminator: 5' CAAAGCGGCCATCGTGC 3'(SEQ ID NO: 6).
Establishment of carrot callus and cell suspension culture Establishment of carrot callus (i.e., undifferentiated carrot cells) and cell suspension cultures were performed as described previously by Torres K.C. (Tissue culture techniques for horticular crops, p.p. 1 1 1, 169 ).
Transformation of carrot cells and isolation of transformed cells.
Transformation of carrot cells was preformed using Agrobacterium transformation by an adaptation of a method described previously [Wurtele, E.S. and Bulka, K. Plant Sci. 61 :253-262 (1989)]. Cells growing in liquid media were used throughout the process instead of calli. Incubation and growth times were adapted for transformation of cells in liquid culture. Briefly, Agrobacteria were transformed with the pGREEN II vector by electroporation [den Dulk-Ra, A. and Hooykaas, P.J. (1995) Methods Mol. Biol. 55:63-72] and then selected using 30 mg/ml paromomycine antibiotic. Carrot cells were transformed with Agrobacteria and selected using 60 mg/ml of paromomycine antibiotics in liquid media.
Screening of transformed carrot cells for isolation of calli expressing high levels of GCD 14 days following transformation, cells from culture were plated on solid media at dilution of 3% packed cell volume for the formation of calli from individual clusters of cells. When individual calli reached 1-2 cm in diameter, the cells were homogenized in SDS sample buffer and the resulting protein extracts were separated on SDS-PAGE [Laemmli U., (1970) Nature 227:680-685] and transferred to nitrocellulose membrane (hybond C nitrocellulose, 0.45 micron. Catalog No: RPN203C From Amersham Life Science) as described in greater detail below. Western blot for detection of GCD was preformed using polyclonal anti hGCD antibodies (described herein below). Calli expressing significant levels of GCD were expanded and transferred to growth in liquid media for scale up, protein purification . and analysis.
Large-scale culture growth in a device according to the present invention An about 1cm callus of genetically modified carrot cells containing the rh- GCD gene (SEQ ID NOs: 13 and 14) was plated onto Murashige and Skoog (MS) 9cm diameter agar medium plate containing 4.4gr/l MSD medium (Duchefa), 9.9mg/l thiamin HC1 (Duchefa), 0.5mg folic acid (Sigma) 0.5mg/l biotin (Duchefa), 0.8g/l Casein hydrolisate (Duchefa), sugar 30g/l and hormones 2-4 D (Sigma). The callus was grown for 14 days at 25°C.
Suspension cell culture was prepared by sub-culturing the transformed callus in a MSD (Murashige & Skoog (1962) containing 0.2 mg/1 2,4-dicloroacetic acid) liquid medium, as is well known in the art. The suspension cells were cultivated in 250ml Erlenmeyer flask (working volume starts with 25ml and after 7 days increases to 50ml) at 25°C with shaking speed of 60rpm. Subsequently, cell culture volume was increased to 1L Erlenmeyer by addition of working volume up to 300ml under the same conditions. Inoculum of the small bio-reactor (10L) [see WO 98/13469] containing 4L MSD medium, was obtained by addition of 400ml suspension cells derived from two 1L Erlenmeyer that were cultivated for seven days. After week of cultivation at 25°C with 1L pm airflow, MSD medium was added up to 10L and the cultivation continued under the same conditions. After additional five days of cultivation, most of the cells were harvested and collected by passing the cell media through 80μ net. The extra medium was squeezed out and the packed cell cake was store at -70°C.
In a first experiment, growth of transformed (Glucocerebrosidase (GCD)) carrot cell suspension was measured in a device according to the present invention as opposed to an Erlenmeyer flask. Growth was measured as packed cell volume (4000 rpm) and as dry weight. Measuring growth in the Erlenmeyer flask was performed by starting 21 flasks and harvesting 3 flasks every day. The harvested flasks were measured for wet weight, dry weight and GCD content. Reactor harvest was performed by using the harvest port (harvester); each day 50 ml of suspension were harvested for wet and dry weight measurement.
Figure 12 shows that the cells grown in the flask initially show a higher rate of growth, possibly due to the degree of aeration; however, the rates of growth for cells grown in the device and in the flask were ultimately found to be highly similar, and the experimental results obtained in the below experiments to also be highly similar.
The amount of protein in the transfected plant cells was then measured. GCD was extracted in phosphate buffer 0.5 M pH 7.2 containing 10% w/w PVPP (Poly vinyl poly pyrolidone) and 1% Triton X-100. GCD content was measured in samples from flask grown suspensions and/or with samples taken from cell cultures grown in the device of the present invention, by using quantitative Western blot. The Western blot was performed as follows.
For this assay, proteins from the obtained sample were separated in SDS polyacrylamide gel electrophoresis and transferred to nitrocellulose. For this purpose, SDS polyacrylamide gels were prepared as follows. The SDS gels consist of a stacking gel and a resolving gel (in accordance with Laemmli, UK 1970, Cleavage of structural proteins during assembly of the head of bacteriphage T4, Nature 227, 680-685). The composition of the resolving gels was as follows: 12% acrylamide (Bio-Rad), 4 microliters of TEMED (Ν,Ν,Ν',Ν'-tetramethylethylenediamine; Sigma catalog number T9281) per 10ml of gel solution, 0.1% SDS, 375 mM Tris-HCl, pH 8.8 and ammonium persulfate (APS), 0.1%. TEMED and ammonium persulfate were used in this context as free radical starters for the polymerization. About 20 minutes after the initiation of polymerization, the stacking gel (3% acrylamide, 0.1% SDS, 126 mM Tris-HCl, pH 6.8, 0.1% APS and 5 microliters of TEMED per 5ml of stacking gel solution) was poured above the resolving gel, and a 12 or 18 space comb was inserted to create the wells for samples.
The anode and cathode chambers were filled with identical buffer solution: Tris glycine buffer containing SDS (Biorad, catalog number 161-0772), pH 8.3. The antigen-containing material was treated with 0.5 volume of sample loading buffer (30ml glycerol (Sigma catalog number G9012), 9% SDS, 15 ml mercaptoethanol (Sigma catalog number M6250), 187.5 mM Tris-HCl, pH 6.8, 500 microliters bromophenol blue, all volumes per 100 ml sample buffer), and the mixture was then heated at 100 °C for 5 minutes and loaded onto the stacking gel.
The electrophoresis was performed at room temperature for a suitable time period, for example 45-60 minutes using a constant current strength of 50-70 volts followed by 45-60 min at 180-200 Volt for gels of 13 by 9 cm in size. The antigens were then transferred to nitrocellulose (Schleicher and Schuell, Dassel).
Protein transfer was performed substantially as described herein. The gel was located, together with the adjacent nitrocellulose, between Whatmann 3 MM filter paper, conductive, 0.5 cm-thick foamed material and wire electrodes which conduct the current by way of platinum electrodes. The filter paper, the foamed material and the nitrocellulose were soaked thoroughly with transfer buffer (TG buffer from Biorad, catalog number 161-0771 , diluted 10 times with methanol and water buffer (20% methanol)). The transfer was performed at 100 volts for 90 minutes at 4°C.
After the transfer, free binding sites on the nitrocellulose were saturated, at 4 °C over-night with blocking buffer containing 1% dry milk (Dairy America), and 0.1% Tween 20 (Sigma Cat PI 379) diluted with phosphate buffer (Riedel deHaen, catalog number 30435). The blot strips were incubated with an antibody (dilution, 1 :6500 in phosphate buffer containing 1% dry milk and 0.1% Tween 20 as above, pH 7.5) at 37 °C for 1 hour.
After incubation with the antibody, the blot was washed three times for in each case 10 minutes with PBS (phosphate buffered sodium phosphate buffer (Riedel deHaen, catalog number 30435)). The blot strips were then incubated, at room temperature for 1 h, with a suitable secondary antibody (Goat anti rabbit (whole molecule) HRP (Sigma cat # A-4914)), dilution 1 :3000 in buffer containing 1% dry milk (Dairy America), and 0.1% Tween 20 (Sigma Cat PI 379) diluted with phosphate buffer (Riedel deHaen, catalog number 30435)). After having been washed several times with PBS, the blot strips were stained with ECL developer reagents (Amersham RPN 2209).
After immersing the blots in the ECL reagents the blots were exposed to X-ray film FUJI Super RX 18x24 , and developed with FUJI-ANATOMIX developer and fixer (FUJI-X fix cat# FIXRTU 1 out of 2). The bands featuring proteins that were bound by the antibody became visible after this treatment.
Figure 13 shows the results, indicating that the amount of GCD protein relative to the total protein (plant cell and GCD) was highest on days 3 and 4, after which the relative level of GCD declined again. Results were similar for cells grown in flasks or in the device of the present invention.
Next, the start point of 7% and 15% packed cell volume were compared (again results were similar for cells grown in flasks or in the device of the present invention). By "packed cell volume" it is meant the volume of cells setttling within the device of the present invention after any disturbing factors have been removed, such as aeration of the media. Figure 14 shows the growth curves, which are parallel. Figure 15 shows the amount of GCD protein from a quantitative Western blot, indicating that the amount of GCD protein relative to the total protein (plant cell and GCD) was highest on days 5 and 6, after which the relative level of GCD declined again (it should be noted that samples were taken from cells grown from 15% packed cell volume).
Growth was measured over an extended period of time (14 days) to find the stationary point, where the rate of growth levels off. As shown with regard to Figure 16, this point is reached on day 8, after which growth is reduced somewhat. Therefore, in order to be able to grow cells transfected with a polynucleotide expressing GCD, preferably cells are grown at least until the stationary point, which in this Example is preferably until day 8 (or shortly thereafter).
Figure 17 shows that the maximum amount of GCD (relative to other proteins) is produced by transformed cells through day 8, after which the amount of GCD produced starts to decline.
Adding at least some fresh media to the container was found to increase cell growth and the amount of GCD being produced by the cells. As shown with regard to Figure 18, the addition of fresh (concentrated) media (media addition) and/or replacement of media (media exchange) on the fourth day maintains high growth level of cells beyond day 8. Furthermore, the replacement of media with fresh media on day four clearly enables a much higher amount of GCD to be produced (see Figure 19 for a quantitative Western blot; "refreshing media" refers to replacement of all media with fresh media). Adding concentrated fresh media on day four also results in a higher amount of GCD being produced (see Figure 20 for a quantitative Western blot).
The effect of different sugar regimes on cell growth is shown with regard to Figure 21, and on production of GCD is shown with regard to Figure 22. As previously described, optionally but preferably, higher sucrose levels than normally recommended for plant cell culture are used, for example by adding sucrose, such that the concentration in the media may optionally be 40g/l rather than 30g/l. One or more other sugars may optionally be added, such as glucose, fructose or other sugars, to complement sucrose. Sucrose (and/or one or more other sugars) is also optionally and preferably added during the cell culture process, more preferably on day 3 or 4 after starting the culture process. The effect of these alterations to the cell culture process is described in greater detail below.
In Figure 21 , the label 40g sucrose indicates that 40g of sucrose was added at the start of cell growth; the label "30g sucrose + lOg glucose" indicates that this combination of sugars was present at the start of cell growth; the label "extra sucrose" indicates that 30g/l of sucrose was present at day zero (start of cell growth) and that 30g/l sucrose was added to the medium on day 4; the label "extra MSD" indicates that MSD medium was added; and the label "control" indicates that 30g/l sucrose was present at day zero (start of cell growth). As shown, the presence of extra MSD had the greatest effect by day 7, followed by the use of a higher amount of sucrose (40 g/1), followed by the addition of sucrose mid-way through the growth cycle.
Figure 22 shows that both the use of a higher amount of sucrose (40g/l) in Figure 22A and the addition of sucrose on day four (Figure 22B) increased the amount of GCD produced; however, the latter condition produced a spike of GCD production on day 5, while the former condition provided overall higher amounts of GCD production for several days.
Increased aeration generally (i.e. - the presence of a more rapid gas exchange) and increased oxygen specifically both increased the rate of growth of GCD transformed plant cells. For these experiments, the cultures were initially aerated at a rate of 1 liter of air per minute. Increased aeration was performed by increasing the rate of air flow to 1.5 or 2 liters per minute, as shown with regard to Figure 23. Oxygen was added starting on the fourth day, with up to 300% oxygen added as shown with regard to Figure 24 (solid line without symbols shows the oxygen pressure). Otherwise the conditions were identical.
Figure 23 shows the effect of aeration rate on cell growth in a 10 L device according to the present invention. As shown, increased aeration (greater than the base of 1 L air exchange per minute), provided as 1.5 L per minute (Figure 23 A) or 2 L per minute (Figure 23B) resulted in an increased level of cell growth.
Figure 24 shows the effect of adding more oxygen to the device according to the present invention. Oxygen was added starting on day 4; the pressure of the additional oxygen is shown as a solid black line without symbols. It should be noted that because the cell culture medium becomes increasingly viscous as the cells grow and multiply, the measurement of oxygen pressure can be somewhat variable, even though the flow of oxygen was maintained at a constant level. As shown, cells receiving extra oxygen clearly showed a higher growth rate, particularly after day 7, when the growth rate typically starts to level off, as shown for cells which did not receive oxygen.
Example 5b: Cloning and Expression of Biologically Active Human Coagulation Factor X in Carrot Calli Materials and Experimental Procedures Plasmid vectors: CE-K Plasmid: The backbone of the CE-K plasmid is a Bluescript SK+ plasmid (Stratagene, La Jolla CA)(SEQ ID NO: 15) with an additional cassette in the polycloning site containing all the necessary elements for high level expression and retention in the endoplasmic reticulum of the plant cells. This cassette includes (see sequence (SEQ ID NO: 16 and map, see Figure 26): CaMV35S promoter, omega enhancer, DNA fragment coding for the ER targeting signal from the basic endochitinase gene [Arabidopsis thaliana], EcoRI and Sail restriction sites for fusion of the recombinant gene, KDEL ER retention signal, and the transcription termination and polyadenylation signal of the Agrobacterium tumefaciens octopine synthase (OCS) gene. pGreen vector: Binary plasmid vectors are designed to integrate manipulated DNA into the genome of plants. pGREEN, is a second generation binary vector for plant transformation, a smaller and more flexible plasmid In the pGREEN vector the concept of seperating functions which can act in trans were taken a step further. The RepA gene is not present on the cloning vector, but is provided on a compatible plasmid, which is co-resident within transformed Agrobacterium cells. By removing the RepA function and other unnecssary conjugation functions, the overall plasmid size has been dramaticaly reduced. (Hellens, et al Plant Mol. Bio. 2000; 42: 819-832).
Cloning of the Human Factor X gene: The cDNA for human coagulation factor X (HSFACX, GenBank Accession No: M57285)(SEQ ID N0s:17 and 18XXX was prepared from the plasmid Sig-CEXGLY-FX-HDEL, which includes the complete cDNA for Factor X. The coding region was amplified and restriction sites for EcoRI and Sail added for sub-cloning according to art recognized protocols. Briefly, the coding sequence of mature Human Factor X was amplified using the forward primer: Fx start EcoRI:5' CCGAATTCCGCGTAAGCTCTGCAGCC 3' (SEQ ID NO: 19) And the reverse primer: Fx end Sail kdel: ' GCGTCGACGAAGTAGGCTTG 3' (SEQ ID NO:20); also enabling fusion of signals at the N- and C- terminals of the gene via the incorporated restriction sites, EcoRI and Sail.
The amplification reactions were carried out using the Expand High Fidelity PCR System (Roche-Applied-Science catalogue number: 1732650), according to manufacturers instructions. The PCR products were separated on a 1 % agarose gel for identification of the factor X sequence. Figure 25 shows the predominant amplified HSFACX band (marked by arrow). The band was eluted, cut with the restriction enzymes EcoRI and Sail, and ligated into a purified CE-K expression cassette according to manufacturer's instructions.
The ligation mixture was used to transform E-Coli DH5a and transformed bacteria were selected on agar plates with 100μg/ml ampicilline. Positive clones were selected by PCR analysis using FX forward and reverse primers, and further verified by restriction analysis using Smal + Xbal, Hindlll, and Notl.
The expression cassette was cut from the CEK-FX-ER plasmid using restriction enzymes Asp718 and Xbal. The binary vector pGREEN nos-kana was cut with the same enzymes, dephosphorylated and eluted from 1% agarose gel. The binary vector and the FX-ER expression cassette were ligated, and used to transform E. coli DH5a host cells. After transformation, growth and plasmid extraction, positive clones were verified by PCR and restriction analysis with Hindlll and Bglll. The selected clone pGREENnoskana FX-ER (Figure 28,) was further verified by sequencing.
Plant transformation: Transformation of carrot cells was performed using Agrobacterium transformation by an adaptation of a method described previously [Wurtele, E.S. and Bulka, . Plant Sci. 61 :253-262 (1989)]. Cells growing in liquid media were used throughout the process instead of calli. Incubation and growth times were adapted for transformation of cells in liquid culture. Briefly, Agrobacteria LB4404 were transformed with the pGREEN noskana FX-ER vector by electroporation [den Dulk-Ra, A. and Hooykaas, P.J. (1995) Methods Mol. Biol. 55:63-72] and then selected using 30 mg/ml paromomycine antibiotic. Carrot cells {Daucus carota) were transformed with Agrobacteria and selected using 60 mg/ml of paromomycine antibiotics in liquid media.
Results Expression of Active Recombinant Human Factor X in Cultured Carrot Cells Expression and analysis in carrot cells: Transformed carrot cells were grown in cultures in Murashige & Skoog medium (Physiol. Plant, 15, 473, 1962) supplemented with 0.2 mg/1 2,4 dichloromethoxy acetic acid, as described for GCD hereinabove. Cell were grown for seven days after which the cells were harvested. Excess liquid was separated on a 100 mesh filter. The cell contents were extracted for the evaluation of protein content, as described in detail hereinabove. Carrot cells transformed with the FX cDNA were analysed for FX expression by Western blot analysis using Rabbit anti-Human factor X purified IgG From Affinity Biologicals (Hamilton Ontario, Canada). A number of different cell lines were analysed (Figure 30). Figure 30 (lanes 1 and 2) demonstrate the strong expression of Human factor X in the carrot cells. The different sizes observed are due to partial proccessing of the recombinant human factor X pro-protein.
To confirm the identity of the recombinant protein, it's ability to be cleaved by furin was tested. Furin is a calcium dependent serine protease, and a major processing enzyme of the secretory pathway. Furin cleaves Factor X as well as other clotting factors and growth factors. Furin was purchased from New England Biolabs and the cleavage assay was performed according to the manufacturer's recomendations. Figure 31 shows the accurate digestion of the recombinant factor X by the furin (see lane 5 compared to lane 6).
Activity analysis in carrot cells: Activity assay of the recombinant factor X was performed using Pefachrome FXa (Pefa-5523, Chromogenix, Milano, Italy), a chromogenic peptide substrate for factor Xa. Figure 32 (see solid lines as compared to the broken lines) clearly show accurate Factor X activity in the extracts from carrot cells expressing the recombinant FX grown in large scale culture.
Large-scale culture growth in a device according to the present invention An about 1cm callus of genetically modified carrot cells containing the recombinant human FX gene (SEQ ID NOs:16 and 21) are plated onto Murashige and Skoog (MS) 9cm diameter agar medium plate containing 4.4gr/l MSD medium (Duchefa), 9.9mg/l thiamin HC1 (Duchefa), 0.5mg folic acid (Sigma) 0.5mg/l biotin (Duchefa), 0.8g/l Casein hydrolisate (Duchefa), sugar 30g/l and hormones 2-4 D (Sigma, St Louis, MO). The callus is grown for 14 days at 25°C.
Suspension cell culture is prepared by sub-culturing the transformed callus in a MSD (Murashige & Skoog (1962) containing 0.2 mg/1 2,4-dicloroacetic acid) liquid medium, as is well known in the art. The suspension cells are cultivated in 250ml Erlenmeyer flask (working volume starts with 25ml and after 7 days increases to 50ml) at 25°C with shaking speed of 60rpm. Subsequently, cell culture volume is increased to 1L Erlenmeyer by addition of working volume up to 300ml under the same conditions. Inoculum of the small bio-reactor (10L) [see WO 98/13469] containing 4L MSD medium, is obtained by addition of 400ml suspension cells derived from two 1L Erlenmeyer flasks that was cultivated for seven days. After a week of cultivation at 25°C with ILiter per minute airflow, MSD medium is added up to 10L and the cultivation continued under the same conditions. After additional five days of cultivation, most of the cells are harvested and collected by passing the cell media through 80μ net. The extra medium is squeezed out and the packed cell cake stored at -70°C.
Example 5c: Cloning and Expression of Human Interferon β in Carrot Calli Materials and Experimental Procedures CE-K Plasmid: The backbone of the CE-K plasmid is a Bluescript SK+ plasmid (Stratagene, La Jolla CA)(SEQ ID NO.T5) with an additional cassette in the polycloning site containing all the necessary elements for high level expression and retention in the endoplasmic reticulum of the plant cells. This cassette includes (see sequence (SEQ ID NO:27and map, Figure 37): CaMV35S promoter, omega enhancer, DNA fragment coding for the ER targeting signal from the basic endochitinase gene [Arabidopsis thaliana , EcoRI and Sail restriction sites for fusion of the recombinant gene, KDEL ER retention signal, and the transcription termination and polyadenylation signal of the Agrobacterium tumefaciens octopine synthase (OCS) gene. pPZPlll: Binary vector are designed to integrate manipulated DNA into the genome of plants. The binary Ti vector pPZPl l l (Hajdukiewicz, et al. Plant Mol Biol 1994; 25: 989-994) carries the gene for kanamycin resistance, adjacent to the left border (LB) of the transferred region. A lacZ alpha-peptide, with the pUC18 multiple cloning site (MCS), lies between the plant marker gene and the right border (RB). Thus, since the RB is transferred first, drug resistance is obtained only if the passenger gene is present in the transgenic plants.
Cloning of the Human Interferon β gene The cDNA for Human Interferon β (Ιίηβ, HUMIFNB1, GenBank Accession No. M28622, SEQ ID NOs: 22 and 23) gene was obtained from Haki (Peprotech Inc. Princeton, NJ). The coding region was amplified and restriction sites EcoRI and Sail addition for sub-cloning. Two portions of the coding region of mature Human Interferon β sequences were amplified, alternatively targeted to the endoplasmic reticulum (using primers 1 and 2) or to the apoplast (using primers 1 and 3): 1. Forward primers: Ιίηβ start EcoRI: 5 ' C AG AATTC ATG AGCTATAATC 3 ' (SEQ ID NO: 24) 2. Reverse primer: Ιίηβ end Sail kdel 5'GGATGTCGACTTACGCAGGTAG 3' (SEQ ID NO: 25) 3. Reverse primer II: Ιίηβ end Sail STOP 5'GTGTCGACTTAGTTACGCAGGTAG 3' (SEQ ID NO: 26).
Also enabling fusion of signals at the N- and C- terminals of the gene via the incorporated restriction sites, EcoRI and Sail.
The amplification reactions were carried out using the Expand High Fidelity PCR System (Roche-Applied-Science catalogue number: 1732650), according to the manufacturer's instructions. The PCR products were separated on a 1% agarose gel for identification of the human Interferon β sequence. The PCR product band was eluted as described hereinabove, and 10% of the eluted DNA was separated again on a 1% agarose gel for verification and purification. Figure 33shows the purified cloned Human Interferon β sequence (arrow marks the PCR product).
The PCR product was eluted, cut with the restriction enzymes EcoRI and Sail, and ligated into a CE-K expression cassette according to manufacturer's instructions.
The ligation mixture was used to transform E-Coli DH5a, transformed bacteria were selected on agar plates with 10(^g/ml ampiciline. Positive clones were selected by PCR analysis using 35S forward (SEQ ID NO: 5) and Terminator reverse (SEQ ID NO: 6) primers (Figures 34 and 35). The cloning was further verified by restriction analysis using EcoRI + Sail, and Kpnl + Xbal (Figure 36).
The expression cassettes were cut from the CEK-ifn-ER (Figure 37) and CEK-ifn-STOP plasmids using restriction enzymes Kpnl and Xbal. The binary vector pPZPl 1 1 (Figure 38) was also cut with Kpnl and Xbal, dephosphorylated and eluted from 1% agarose gel. The binary vector and the interferon expression cassettes were ligated. After transformation to E. coli DH5a and plasmid extraction, positive clones were verified by PCR and restriction analysis.
Plant transformation: Transformation of carrot cells was performed using Agrobacterium transformation by an adaptation of a method described previously [Wurtele, E.S. and Bulka, K. Plant Sci. 61 :253-262 (1989)]. Cells growing in liquid media were used throughout the process instead of calli. Incubation and growth times were adapted for transformation of cells in liquid culture. Briefly, Agrobacteria LB4404 were transformed with the "pzp-ifn-KDEL" and pzp-ifn-STOP" vectors by electroporation [den Dulk-Ra, A. and Hooykaas, P.J. (1995) Methods Mol. Biol. 55:63-72] and then selected using 30 mg/ml paromomycine antibiotic. Carrot cells (Daucus car ota) were transformed with Agrobacteria and selected using 60 mg/ml of paromomycine antibiotics in liquid media.
Results Expression of Active Recombinant Human Interferon β in Cultured Carrot Cells Expression and analysis in carrot cells: Initial analysis: Transformed carrot cells were grown in cultures in Murashige & Skoog medium (Physiol. Plant, 15, 473, 1962) supplemented with 0.2 mg/1 2,4 dichloromethoxy acetic acid, as described for GCD hereinabove. Cell were grown for seven days after which the cells were harvested. Excess liquid was separated on a 100 mesh filter. Two weeks following the transformation cell samples were collected for preliminary analysis of interferon expression using a dot blot assay using monoclonal mouse anti human interferon beta antibodies and affinity purified rabbit anti interferon beta antibodies (Calbiochem, La Jolla, CA). Both antibodies gave a strong and specific signal in interferon β transformed cells, and no signal in nontransformed cells.
Selection of best expressing calli: Two weeks after transformation, human interferon β expressing cells were poured over solid agar with selection antibiotics (Kanamycin and Cefotaxime) to isolate calli representing individual transformation events. After the calli were formed they were transferred to individual plates and grown for three months. Enough material was recovered from the resultant calli to analyze the expression levels in individual calli, and identify the calli having strongest expression. Figure 40 shows a sample Western blot for screening the transformed calli for the strongest expression of human interferon β (see, for example, lanes 1 and 2).
Activity analysis in carrot cells: In order to assess the biological activity of the recombinant human interferon β produced in carrot cells, the recombinant expressed protein was assayed for the viral cytopathic inhibition effect (Rubinstein, et al J Virol 1981 ;37:755-758). Briefly, recombinant human interferon β samples were pre-diluted and applied to a pre-formed monolayer of WISH cells (a human amnionic epithelial cell line). The WISH cells were challenged with vesicular stomatitis virus (VSV) and cell viability monitored. The titer (expressed in U/ml) is determined relative to an NIH standard human interferon β. Table 1 shows the results of the viral cytopathic inhibition assay using protein extracts prepared from different transgenic carrot lines.
Table 1- Recombinant Human Interferon β Expressed in Carrot Calli Thus, in view of these results, recombinant human interferon β expressed in carrot calli is clearly demonstrates antigenic and functional identity with native human interferon β.
Large-scale culture growth in a device according to the present invention An about 1cm callus of genetically modified carrot cells containing the recombinant human gene interferon β (SEQ ID NOs: 27 and 28) are plated onto Murashige and Skoog (MS) 9cm diameter agar medium plate containing 4.4gr/l MSD medium (Duchefa), 9.9mg/l thiamin HC1 (Duchefa), 0.5mg folic acid (Sigma) 0.5mg/l biotin (Duchefa), 0.8g/l Casein hydrolysate (Duchefa), sugar 30g/l and hormones 2-4 D (Sigma, St Louis, MO). The callus is grown for 14 days at 25°C.
Suspension cell culture is prepared by sub-culturing the transformed callus in a MSD (Murashige & Skoog (1962) containing 0.2 mg/1 2,4-dicloroacetic acid) liquid medium, as is well known in the art. The suspension cells are cultivated in 250ml Erlenmeyer flask (working volume starts with 25ml and after 7 days increases to 50ml) at 25°C with shaking speed of 60rpm. Subsequently, cell culture volume is increased to 1L Erlenmeyer by addition of working volume up to 300ml under the same conditions. Inoculum of the small bio-reactor (10L) [see WO 98/13469] containing 4L MSD medium, is obtained by addition of 400ml suspension cells derived from two 1L Erlenmeyer flasks that was cultivated for seven days. After a week of cultivation at 25°C with 1 Liter per minute airflow, MSD medium is added up to 10L and the cultivation continued under the same conditions. After additional five days of cultivation, most of the cells are harvested and collected by passing the cell media through 80μ net. The extra medium is squeezed out and the packed cell cake stored at -70°C.
Example 5d: Cloning and Expression of Infectious bursal disease virus viral protein 2 (VPII) in Carrot Calli Materials and Experimental Procedures CE Plasmid: The backbone of the CE plasmid is a Bluescript SK+ plasmid (Stratagene, La Jolla CA)(SEQ ID NO: 15) with an additional cassette in the polycloning site containing all the necessary elements for high level expression and retention in the endoplasmic reticulum of the plant cells. This cassette includes (see sequence (SEQ ID NO: 32and map, Figure XXX): CaMV35S promoter, omega enhancer, DNA fragment coding for the ER targeting signal from the basic endochitinase gene [Arabidopsis thaliana], EcoRI and Sail restriction sites for fusion of the recombinant gene, KDEL ER retention signal, and the transcription termination and polyadenylation signal of the Agrobacterium tumefaciens octopine synthase (OCS) gene. pGA492: Binary vector are designed to integrate manipulated DNA into the genome of plants. The binary Ti vector pGA492 (An, Methods in Enzymol 1987; 153: 292-305) carries the gene for kanamycin resistance.
Cloning of the infectious bursal disease virus viral protein 2 (VPII) gene: The cDNA sequence for infectious bursal disease virus viral protein 2 (VPII) gene (GenBank Accession No. L42284) (SEQ ID NO: 29) was obtained from DR. J.
Pitkovski, MIGAL Kiryat Shemona Israel). The virus genome is formed by two segments of double-stranded RNA. Segment A (3.2 kb) contains two open reading frames (ORFs), Al and A2. ORF Al codes for a polyprotein of 108 kDa that, after proteolytic processing, yields three mature polypeptides: VP2 (VPII) (37 to 40 kDa), VP3 (30 to 32 kDa), and VP4 (22 kDa). VPII and VP3 form the virus capsid, and VP4 is responsible for the cleavage of the polyprotein.
The cDNA coding for VPII was amplified with primers to facilitate cloning and signal fusion. Briefly, the coding sequence of VPII was amplified using the forward primer: VPII- (SEQ ID NO: 30) ' GCCTTCTGATGGCGCATGCAAATGGCAAACCTGCAAGATCAAACC 3' And the reverse primer: VPII-(SEQ ID NO: 31) ' GCCGGTGGTCTCTGCC ATAAGGAGG AT AGCTGTGTAAT AGG AATTCGC 3' Also enabling fusion of signals at the N- terminal of the gene via the incorporated restriction site, SphI.
The amplification reactions were carried out using the Expand High Fidelity PCR System (Roche-Applied-Science catalogue number: 1732650), according to manufacturer's instructions. The PCR products were separated on a 1% agarose gel for identification of the VPII sequence. Figure 40 shows the predominant VPII band (marked by the arrow). The band was eluted, cut with the restriction enzymes EcoRI and SphI, and ligated into purified CE expression cassette according to the manufacturer's instructions.
The ligation mixture was used to transform E-Coli DH5a, and transformed bacteria were selected on agar plates with 10(^g/ml ampiciline. Positive clones were selected by PCR analysis using 35S forward and Terminator reverse primers: Forward primer from the 35S promoter: 5' CTCAGAAGACCAGAGGGCT 3' (SEQ ID NO: 5) Backward primer from the terminator: 5' CAAAGCGGCCATCGTGC 3' (SEQ ID NO: 6) The expression cassettes were cut from the CE-VPII plasmids using restriction enzymes BamHI and Xbal. The pGA492 vector was cut with Bglll and Xbal (Bglll and BamHI have compatible sticky ends), and eluted from 1% agarose gel. The binary vector and the VPII expression cassettes were ligated and used to transform E. coli DH5a host cells. After transformation, growth and plasmid extraction, positive clones were verified by PCR and restriction analysis.
Plant transformation: Transformation of carrot cells was performed using Agrobacterium transformation by an adaptation of a method described previously [Wurtele, E.S. and Bulka, K. Plant Sci. 61 :253-262 (1989)]. Cells growing in liquid media were used throughout the process instead of calli. Incubation and growth times were adapted for transformation of cells in liquid culture. Briefly, Agrobacteria LB4404 were transformed with the "pGA492-CE-VPII" vector by electroporation [den Dulk-Ra, A. and Hooykaas, P.J. (1995) Methods Mol. Biol. 55:63-72] and then selected using 30 mg/ml paromomycine antibiotic. Carrot cells (Daucus carota) were transformed with Agrobacteria and selected using 60 mg/ml of paromomycine antibiotics in liquid media.
Results Expression of Recombinant VPII in Cultured Carrot Cells Expression and analysis in carrot cells: Initial analysis: Transformed carrot cells were grown in cultures in Murashige & Skoog medium (Physiol. Plant, 15, 473, 1962) supplemented with 0.2 mg/1 2,4 dichloromethoxy acetic acid, as described for GCD hereinabove. Cell were grown for seven days after which the cells were harvested. Excess liquid was separated on a 100 mesh filter. Two weeks following the transformation cell samples were collected for preliminary analysis of VPII expression using a dot blot assay using chicken anti-IBDV and rabbit anti- IBDV antibodies. Both antibodies gave a strong and specific signal in VBII transformed cells, and no signal in nontransformed cells.
Selection of best expressing calli: Two weeks after transformation, human interferon β expressing cells were poured over solid agar with selection antibiotics (kanamycin and cefotaxime) to isolate calli representing individual transformation events. After the calli were formed they were transferred to individual plates and grown for three months. Enough material was recovered from the resultant calli to analyze the expression levels in individual calli by Western blot analysis, and identify the calli having strongest expression. Figure 44 shows a sample Western blot for screening the transformed calli for the strongest expression of VP 11 (see, for example, lanes 2 and 11 ). Following the screening the best expressing callus (vp2R21) was selected and transferred to liquid media for expansion.
Recombinant VP11- Chicken vaccination assay: Recombinant VP 1 1 was assayed for effectiveness as a vaccine against infectious bursal disease in chickens. Total protein extract was prepared from calli from line vp2R21, and administered (to 10 4 weeks old chickens in each group) by injection (lmg ) or orally (3 X 100μg). Oral administration was performed by feeding 2 grams of filtered cell suspension per chicken on three successive days. The protective effects of vaccination with recombinant VPII are shown in Table 2: Table 2: Vaccination with VPII expressed in Carrot Cells In a second experiment 800μg vpll were administered orally, resulting in immunization of 17% of the chickens (resuts not shown). Thus, recombinant Vpl l expressed in carrot cells is effective as an injected vaccine.
Large-scale culture growth in a device according to the present invention An about 1cm callus of genetically modified carrot cells containing the recombinant VPII (SEQ ID NOs: 32 and 33) are plated onto Murashige and Skoog (MS) 9cm diameter agar medium plate containing 4.4gr/l MSD medium (Duchefa), 9.9mg/l thiamin HC1 (Duchefa), 0.5mg folic acid (Sigma) 0.5mg/l biotin (Duchefa), 0.8g/l Casein hydrolisate (Duchefa), sugar 30g/l and hormones 2-4 D (Sigma, St Louis, MO). The callus is grown for 14 days at 25°C.
Suspension cell culture is prepared by sub-culturing the transformed callus in a MSD (Murashige & Skoog (1962) containing 0.2 mg/1 2,4-dicloroacetic acid) liquid medium, as is well known in the art. The suspension cells are cultivated in 250ml Erlenmeyer flask (working volume starts with 25ml and after 7 days increases to 50ml) at 25°C with shaking speed of 60rpm. Subsequently, cell culture volume is increased to 1L Erlenmeyer by addition of working volume up to 300ml under the same conditions. Inoculum of the small bio-reactor (10L) [see WO 98/13469] containing 4L MSD medium, is obtained by addition of 400ml suspension cells derived from two 1L Erlenmeyer flasks that was cultivated for seven days. After a week of cultivation at 25°C with 1 Liter per minute airflow, MSD medium is added up to 10L and the cultivation continued under the same conditions. After additional five days of cultivation, most of the cells are harvested and collected by passing the cell media through 80μ net. The extra medium is squeezed out and the packed cell cake stored at -70°C.
It is appreciated that certain features of the invention, which are, for clarity, described in the context of separate embodiments, may also be provided in combination in a single embodiment. Conversely, various features of the invention, which are, for brevity, described in the context of a single embodiment, may also be provided separately or in any suitable subcombination.
Although the invention has been described in conjunction with specific embodiments thereof, it is evident that many alternatives, modifications and variations will be apparent to those skilled in the art. Accordingly, it is intended to embrace all such alternatives, modifications and variations that fall within the spirit and broad scope of the appended claims. In addition, citation or identification of any reference in this application shall not be construed as an admission that such reference is available as prior art to the present invention.
It is important to note that those portions of the specification which do not fall within the scope of the claims do not belong to the invention. 1 SEQUENCE LISTING <110> Protalix Ltd. <120> CELL/TISSUE COLTORING DEVICE, SYSTEM AND METHOD <130> 32406 <160> 14 <170> Patentln version 3.2 <210> 1 <211> 22 <212> PRT <213> Artificial sequence <220> <223> Signal Peptide for the ER <400> 1 Met Lys Thr Asn Leu Phe Leu Phe Leu He Phe Ser Leu Leu Leu Ser 1 5 10 15 Leu Ser Ser Ala Glu Phe <210> 2 <211> 7 <212> PRT <213> Artificial sequence <220> <223> Vacuolar targeting signal from Tobacco chitinase A <400> 2 Asp Leu Leu Val Asp Thr Met 1 5 <210> 3 <211> 21 <212> DNA <213> Artificial sequence <220> <223> Single strand DNA oligonucleotide <400> 3 cagaattcgc ccgcccctgc a <210> 4 <211> 22 <212> DNA <213> Artificial sequence <220> <223> Single strand DNA oligonucleotide <400> 4 ctcagatctt ggcgatgcca ca 22 <210> 5 <211> 19 <212> DNA <213> Artificial sequence <220> <223> Single strand DNA oligonucleotide 2 <400> 5 ctcagaagac cagagggct 19 <210> 6 <211> 17 <212> DNA <213> Artificial sequence <220> <223> Single strand DNA oligonucleotide <400> 6 caaagcggcc atcgtgc 17 <210> 7 <211> 1491 <212> DNA <213> Homo sapiens <400> 7 gcccgcccct gcatccctaa aagcttcggc tacagctcgg tggtgtgtgt ctgcaatgcc 60 acatactgtg actcctttga ccccccgacc tttcctgccc ttggtacctt cagccgctat 120 gagagtacac gcagtgggcg acggatggag ctgagtatgg ggcccatcca ggctaatcac 180 acgggcacag gcctgctact gaccctgcag ccagaacaga agttccagaa agtgaaggga 240 tttggagggg ccatgacaga tgctgctgct ctcaacatcc ttgccctgtc accccctgcc 300 caaaatttgc tacttaaatc gtacttctct gaagaaggaa tcggatataa catcatccgg 360 gtacccatgg ccagctgtga cttctccatc cgcacctaca cctatgcaga cacccctgat 420 gatttccagt tgcacaactt cagcctccca gaggaagata ccaagctcaa gatacccctg 480 attcaccgag ccctgcagtt ggcccagcgt cccgtttcac tccttgccag cccctggaca 540 tcacccactt ggctcaagac caatggagcg gtgaatggga aggggtcact caagggacag 600 cccggagaca tctaccacca gacctgggcc agatactttg tgaagttcct ggatgcctat 660 gctgagcaca agttacagtt ctgggcagtg acagctgaaa atgagccttc tgctgggctg 720 ttgagtggat accccttcca gtgcctgggc ttcacccctg aacatcagcg agacttcatt 780 gcccgtgacc taggtcctac cctcgccaac agtactcacc acaatgtccg cctactcatg 840 ctggatgacc aacgcttgct gctgccccac tgggcaaagg tggtactgac agacccagaa 900 gcagctaaat atgttcatgg cattgctgta cattggtacc tggactttct ggctccagcc 960 aaagccaccc taggggagac acaccgcctg ttccccaaca ccatgctctt tgcctcagag 1020 gcctgtgtgg gctccaagtt ctgggagcag agtgtgcggc taggctcctg ggatcgaggg 1080 atgcagtaca gccacagcat catcacgaac ctcctgtacc atgtggtcgg ctggaccgac 1140 tggaaccttg ccctgaaccc cgaaggagga cccaattggg tgcgtaactt tgtcgacagt 1200 cccatcattg tagacatcac caaggacacg ttttacaaac agcccatgtt ctaccacctt 1260 ggccacttca gcaagttcat tcctgagggc tcccagagag tggggctggt tgccagtcag 1320 aagaacgacc tggacgcagt ggcactgatg catcccgatg gctctgctgt tgtggtcgtg 1380 ctaaaccgct cctctaagga tgtgcctctt accatcaagg atcctgctgt gggcttcctg 1440 gagacaatct cacctggcta ctccattcac acctacctgt ggcatcgcca g 1491 <210> 8 3 <211> 497 <212> PRT <213> Homo sapiens <400> 8 Ala Arg Pro Cys He Pro Lys Ser Phe Gly Tyr Ser Ser Val Val Cys 1 5 10 15 Val Cys Asn Ala Thr Tyr Cys Asp Ser Phe Asp Pro Pro Thr Phe Pro 25 30 Ala Leu Gly Thr Phe Ser Arg Tyr Glu Ser Thr Arg Ser Gly Arg Arg 35 40 45 Met Glu Leu Ser Met Gly Pro He Gin Ala Asn His Thr Gly Thr Gly 50 55 60 Leu Leu Leu Thr Leu Gin Pro Glu Gin Lys Phe Gin Lys Val Lys Gly 65 70 75 80 Phe Gly Gly Ala Met Thr Asp Ala Ala Ala Leu Asn He Leu Ala Leu 85 90 95 Ser Pro Pro Ala Gin Asn Leu Leu Leu Lys Ser Tyr Phe Ser Glu Glu 100 105 110 Gly He Gly Tyr Asn He He Arg Val Pro Met Ala Ser Cys Asp Phe 115 120 125 Ser He Arg Thr Tyr Thr Tyr Ala Asp Thr Pro Asp Asp Phe Gin Leu 130 135 140 · His Asn Phe Ser Leu Pro Glu Glu Asp Thr Lys Leu Lys He Pro Leu 145 150 155 160 He His Arg Ala Leu Gin Leu Ala Gin Arg Pro Val Ser Leu Leu Ala 165 170 175 Ser Pro Trp Thr Ser Pro Thr Trp Leu Lys Thr Asn Gly Ala Val Asn 180 185 190 Gly Lys Gly Ser Leu Lys Gly Gin Pro Gly Asp He Tyr His Gin Thr 195 200 205 Trp Ala Arg Tyr Phe Val Lys Phe Leu Asp Ala Tyr Ala Glu His Lys 210 215 220 Leu Gin Phe Trp Ala Val Thr Ala Glu Asn Glu Pro Ser Ala Gly Leu 225 230 235 240 Leu Ser Gly Tyr Pro Phe Gin Cys Leu Gly Phe Thr Pro Glu His Gin 245 250 255 Arg Asp Phe He Ala Arg Asp Leu Gly Pro Thr Leu Ala Asn Ser Thr 260 265 270 His His Asn Val Arg Leu Leu Met Leu Asp Asp Gin Arg Leu Leu Leu 4 275 280 285 Pro His Trp Ala Lys Val Val Leu Thr Asp Pro Glu Ala Ala Lys Tyr 290 295 300 Val His Gly lie Ala Val His Trp Tyr Leu Asp Phe Leu Ala Pro Ala 305 310 315 320 Lys Ala Thr Leu Gly Glu Thr His Arg Leu Phe Pro Asn Thr. Met Leu 325 330 335 Phe Ala Ser Glu Ala Cys Val Gly Ser Lys Phe Trp Glu Gin Ser Val 340 345 350 Arg Leu Gly Ser Trp Asp Arg Gly Met Gin Tyr Ser His Ser He He 355 360 365 Thr Asn Leu Leu Tyr His Val Val Gly Trp Thr Asp Trp Asn Leu Ala 370 375 380 Leu Asn Pro Glu Gly Gly Pro Asn Trp Val Arg Asn Phe Val Asp 385 390 395 Pro He He Val Asp He Thr Lys Asp Thr Phe Tyr Lys Gin Pro Met 405 410 * 415 Phe Tyr His Leu Gly His Phe Ser Lys Phe He Pro Glu Gly Ser Gin 420 425 430 Arg Val Gly Leu Val Ala Ser Gin Lys Asn Asp Leu Asp Ala Val Ala 435 440 445 Leu Met His Pro Asp Gly Ser Ala Val Val Val Val Leu Asn Arg Ser 450 455 460 Lys Asp Val Pro Leu Thr He Lys Asp Pro Ala Val Gly Phe Leu 470 475 480 Glu Thr He Ser Pro Gly Tyr Ser He His Thr Tyr Leu Trp His Arg 485 490 495 Gin <210> 9 <211> 338 <212> DNA <213> Artificial sequence <220> <223> CaMV 35S Promoter nucleic acid sequence <400> 9 ttttcacaaa gggtaatatc gggaaacctc ctcggattcc attgcccagc tatctgtcac 60 ttcatcgaaa ggacagtaga aaaggaaggt ggctcctaca aatgccatca ttgcgataaa 120 ggaaaggcta tcgttcaaga tgcctctacc gacagtggtc ccaaagatgg acccccaccc 180 acgaggaaca tcgtggaaaa agaagacgtt ccaaccacgt cttcaaagca agtggattga 240 tgtgatatct ccactgacgt aagggatgac gcacaatccc actatccttc gcaagaccct 300 tcctctatat aaggaagttc atttcatttg gagaggac 338 <210> 10 <211> 66 <212> DNA <213> Artificial sequence <220> <223> Nucleic acid sequence <400> 10 atgaagacta atctttttct ctttctcatc ttttcacttc tcctatcatt atcctcggcc gaattc <210> 11 <211> 21 <212> DNA <213> Artificial sequence <220> <223> Nucleic acid sequence <400> 11 gatcttttag tcgatactat g 21 <210> 12 <211> 167 <212> DNA <213> Artificial sequence <220> <223> Sequence for terminator <220> <221> misc_feature <222> (162) .. (162) <223> n is a, c, g, or t <400> 12 taatttcatg atctgttttg ttgtattccc ttgcaatgca gggcctaggg ctatgaataa 60 agttaatgtg tgaatgtgtg aatgtgtgat tgtgacctga agggatcacg actataatcg 120 tttataataa acaaagactt tgtcccaaaa accccccccc cngcaga 167 <210> 13 <211> 2186 <212> DNA <213> Artificial sequence <220> <223> Nucleic acid encoding recombinant GCD fused to signal peptides <220> <221> misc_feature <222> (2181) .. (2181) <223> n is a, c, g, or t <400> 13 ttttcacaaa gggtaatatc gggaaacctc ctcggattcc attgcccagc tatctgtcac 60 ttcatcgaaa ggacagtaga aaaggaaggt ggctcctaca aatgccatca ttgcgataaa 120 ggaaaggcta tcgttcaaga tgcctctacc gacagtggtc ccaaagatgg acccccaccc 180 6 acgaggaaca tcgtggaaaa agaagacgtt ccaaccacgt cttcaaagca agtggattga 240 tgtgatatct ccactgacgt aagggatgac gcacaatccc actatccttc gcaagaccct 300 tcctctatat aaggaagttc atttcatttg gagaggacag gcttcttgag atccttcaac 36.0 aattaccaac aacaacaaac aacaaacaac attacaatta ctatttacaa ttacagtcga 420 gggatccaag gagatataac aatgaagact aatctttttc tctttctcat cttttcactt 480 ctcctatcat tatcctcggc cgaattcgcc cgcccctgca tccctaaaag cttcggctac 540 agctcggtgg tgtgtgtctg caatgccaca tactgtgact cctttgaccc cccgaccttt 600 cctgcccttg gtaccttcag ccgctatgag agtacacgca gtgggcgacg gatggagctg 660 agtatggggc ccatccaggc taatcacacg ggcacaggcc tgctactgac cctgcagcca 720 gaacagaagt tccagaaagt gaagggattt ggaggggcca tgacagatgc tgctgctctc 780 aacatccttg ccctgtcacc ccctgcccaa aatttgctac ttaaatcgta cttctctgaa 840 gaaggaatcg gatataacat catccgggta cccatggcca gctgtgactt ctccatccgc 900 acctacacct atgcagacac ccctgatgat ttccagttgc acaacttcag cctcccagag 960 gaagatacca agctcaagat acccctgatt caccgagccc tgcagttggc ccagcgtccc 1020 gtttcactcc ttgccagccc ctggacatca cccacttggc tcaagaccaa tggagcggtg 1080 aatgggaagg ggtcactcaa gggacagccc ggagacatct accaccagac ctgggccaga 1140 tactttgtga agttcctgga tgcctatgct gagcacaagt tacagttctg ggcagtgaca 1200 gctgaaaatg agccttctgc tgggctgttg agtggatacc ccttccagtg cctgggcttc 1260 acccctgaac atcagcgaga cttcattgcc cgtgacctag gtcctaccct cgccaacagt 1320 actcaccaca atgtccgcct actcatgctg gatgaccaac gcttgctgct gccccactgg 1380 gcaaaggtgg tactgacaga cccagaagca gctaaatatg ttcatggcat tgctgtacat 1440 tggtacctgg actttctggc tccagccaaa gccaccctag gggagacaca ccgcctgttc 1500 cccaacacca tgctctttgc ctcagaggcc tgtgtgggct ccaagttctg ggagcagagt 1560 gtgcggctag gctcctggga tcgagggatg cagtacagcc acagcatcat cacgaacctc 1620 ctgtaccatg tggtcggctg gaccgactgg aaccttgccc tgaaccccga aggaggaccc 1680 aattgggtgc gtaactttgt cgacagtccc atcattgtag acatcaccaa ggacacgttt 1740 tacaaacagc ccatgttcta ccaccttggc cacttcagca agttcattcc tgagggctcc 1800 cagagagtgg ggctggttgc cagtcagaag aacgacctgg acgcagtggc actgatgcat 1860 cccgatggct ctgctgttgt ggtcgtgcta aaccgctcct ctaaggatgt gcctcttacc 1920 atcaaggatc ctgctgtggg cttcctggag acaatctcac ctggctactc cattcacacc 1980 tacctgtggc atcgccaaga tcttttagtc gatactatgt aatttcatga tctgttttgt 2040 tgtattccct tgcaa.tgcag ggcctagggc tatgaataaa gttaatgtgt gaatgtgtga 2100 atgtgtgatt gtgacctgaa gggatcacga ctataatcgt ttataataaa caaagacttt 2160 gtcccaaaaa cccccccccc ngcaga 2186 <210> 14 <211> 526 <212> PRT <213> Artificial sequence <220> ■J <223> Recombinant GCD fused to signal peptides <400> 14 Met Lys Thr Asn Leu Phe Leu Phe Leu He Phe Ser Leu Leu Leu 1 5 10 15 Leu Ser Ser Ala Glu Phe Ala Arg Pro Cys He Pro Lys Ser Phe Gly 25 ■ 30 Tyr Ser Ser Val Val Cys Val Cys Asn Ala Thr Tyr Cys Asp Ser Phe 35 40 45 Asp Pro Pro Thr Phe Pro Ala Leu Gly Thr Phe Ser Arg Tyr Glu Ser 50 55 60 Thr Arg Ser Gly Arg Arg Met Glu Leu Ser Met Gly Pro He Gin Ala 65 70 75 80 Asn His Thr Gly Thr Gly Leu Leu Leu Thr Leu Gin Pro Glu Gin Lys 85 ' 90 95 Phe Gin Lys Val Lys Gly Phe Gly Gly Ala Met Thr Asp Ala Ala Ala 100 105 110 Leu Asn He Leu Ala Leu Ser Pro Pro Ala Gin Asn Leu Leu Leu Lys 115 120 125 Ser Tyr Phe Ser Glu Glu Gly He Gly Tyr Asn He He Arg Val Pro 130 135 140 Met Ala Ser Cys Asp Phe Ser He Arg Thr Tyr Thr Tyr Ala Asp Thr 145 150 _ 155 160 Pro Asp Asp Phe Gin Leu His Asn Phe Ser Leu Pro Glu Glu Asp Thr 165 170 175 Lys Leu Lys He Pro Leu He His Arg Ala Leu Gin Leu Ala Gin Arg 180 185 190 Pro Val Ser Leu Leu Ala Ser Pro Trp Thr Ser Pro Thr Trp Leu Lys 195 200 205 Thr Asn Gly Ala Val Asn Gly Lys Gly Ser Leu Lys Gly Gin Pro Gly 210 215 220 Asp He Tyr His Gin Thr Trp Ala Arg Tyr Phe Val Lys Phe Leu Asp 225 230 235 240 Ala Tyr Ala Glu His Lys Leu Gin Phe Trp Ala Val Thr Ala Glu Asn 245 250 255 Glu Pro Ser Ala Gly Leu Leu Ser Gly Tyr Pro Phe Gin Cys Leu Gly 260 265 270 Phe Thr Pro Glu His Gin Arg Asp Phe He Ala Arg Asp Leu Gly 275 280 285 8 Thr Leu Ala Asn Ser Thr His His Asn Val Arg Leu Leu Met Leu Asp 290 295 300 Asp Gin Arg Leu Leu Leu Pro His Trp Ala Lys Val Val Leu Thr Asp 305 310 315 320 Pro Glu Ala Ala Lys Tyr Val His Gly He Ala Val His Trp Tyr Leu 325 330 335 Asp Phe Leu Ala Pro Ala Lys Ala Thr Leu Gly Glu Thr His Arg Leu 340 345 350 Phe Pro Asn Thr Met Leu Phe Ala Ser Glu Ala Cys Val Gly Ser Lys 355 360 365 Phe Trp Glu Gin Ser Val Arg Leu Gly Ser Trp Asp Arg Gly Met Gin 370 375 380 Tyr Ser His Ser He He Thr Asn Leu Leu Tyr His Val Val Gly Trp 385 390 395 400 Thr Asp Trp Asn Leu Ala Leu Asn Pro Glu Gly Gly Pro Asn Trp Val 405 410 415 Arg Asn Phe Val Asp Ser Pro He He Val Asp He Thr Lys Asp Thr 420 425 430 Phe Tyr Lys Gin Pro Met Phe Tyr His Leu Gly His Phe Ser Lys Phe 435 440 445 He Pro Glu Gly Ser Gin Arg Val Gly Leu Val Ala Ser Gin Lys Asn 450 455 460 Asp Leu Asp Ala Val Ala Leu Met His Pro Asp Gly Ser Ala Val Val 465 470 475 480 Val Val Leu Asn Arg Ser Ser Lys Asp Val Pro Leu Thr He Lys Asp 485 490 495 Pro Ala Val Gly Phe Leu Glu Thr He Ser Pro Gly Tyr Ser He His 500 505 510 Thr Tyr Leu Trp His Arg Gin Asp Leu Leu Val Asp Thr Met 515 520 525

Claims (45)

72 177586/3 WHAT IS CLAIMED IS:
1. A system for culturing cells and or tissue, the system comprising at least one disposable device for axenically culturing and harvesting cells and/or tissue in at least one cycle, wherein said device comprises a sterilisable disposable container which comprises a reusable harvester which comprises a flow controller for harvesting of at least a desired portion of culture medium containing cells and/or tissues when desired, and wherein said device can be used continuously for at least one further consecutive culturing/harvesting cycle, wherein a remainder of said medium containing cells and/or tissue, remaining from a previous harvested cycle, may serve as inoculant for a next culture and harvest cycle, wherein said cells and/or tissue are plant cells and/or plant tissue and wherein said device comprising at least one air inlet being positioned at or near the bottom end of said device, wherein said bottom of said device is frustro-conical and wherein said air inlets are designed to produce bubbles comprising a mean diameter of between 1 to 10 mm, and wherein said system further comprises plant cells and/or plant tissue expressing a recombinant protein.
2. The system of claim 1, wherein said container is made from a material selected from the group comprising polyethylene, polycarbonate, a copolymer of polyethylene and nylon, PVC and EVA.
3. The system of claim 2, wherein said container is made from a laminate of more than one layer of said materials.
4. The system of claim 1, wherein said air inlets comprise at least one air inlet pipe connectable to a suitable air supply and in communication with a plurality of secondary inlet pipes, each said secondary inlet pipe extending to a location inside said container, via a suitable inlet opening therein, for introducing sterile gas in the form of bubbles into said culture medium.
5. The system of claim 1, wherein said device comprises a box-like geometrical configuration, having an overall length, height and width, and having a 73 177586/3 height-to-length ratio between about 1 and about 3, and preferably about 1.85, and a height to width ratio between about 5 and about 30, and preferably about 13.
6. The system of claim 1, wherein said device comprises a cylindrical geometrical configuration.
7. The system of claim 1, wherein at least some of said gas bubbles comprise a mean diameter of about 4 mm.
8. The system of claim 1, wherein said harvester is located near the bottom of a bottom end of said container, such that at the end of each harvesting cycle said remainder of said medium containing cells and/or tissue automatically remains at said bottom end of said container up to a level below the level of said harvester.
9. The system of claim 1 , wherein said container comprises an internal fillable volume of between about 50 liters and 200 liters or more, and most preferably about 100 liters.
10. The system of claim 1, further comprising a support structure for supporting said device.
11. 1 1. The system of claim 10, wherein said support structure having opposed frames, parallel vertical support members and a lower support member adapted for receiving and supporting a corresponding portion of the bottom end of the device.
12. The system of claim 1, which comprises a battery of at least two said disposable devices.
13. The system of claim 12, wherein said devices are supported by a suitable support structure via an attacher of each said device.
14. The system of claim 12, wherein an additive inlet of each said device is suitably connected to a common additive inlet piping having a free end comprising a suitable aseptic connector thereat. 74 177586/3
15. The system of claim 12, wherein said harvester of each said device is suitably connected to a common harvesting piping having a free end comprising a suitable aseptic connector thereat.
16. The system of claim 12, wherein said air inlet of each said device is suitably connected to a common air inlet piping having a free end comprising suitable a aseptic connector thereat.
17. The system of claim 16, wherein said free end is connectable to a suitable air supply.
18. The system of claim 1, wherein said plant cells are selected from the group consisting of celery cells, ginger cells, horseradish cells, carrot cells, Agrobacterium rhizogenes transformed root cells, alfalfa cells, tobacco cells, and tobacco cell line cells.
19. The system of claim 18, wherein said plant cells are carrot cells.
20. The system of claim 1, wherein said recombinant protein is selected from the group consisting of a prokaryotic protein, a viral protein, a eukaryotic protein and a chimeric protein.
21. The system of claim 20 wherein said viral protein is the infectious bursal disease virus viral protein VPII.
22. The system of claim 20, wherein said eukaryotic protein is Human interferon β.
23. The system of claim 20, wherein said eukaryotic protein is a Human clotting factor.
24. The system of claim 23, wherein said clotting factor is Human Factor X. 75 177586/3
25. The system of claim 20, wherein said eukaryotic protein is a Human lysosomal enzyme.
26. The system of claim 25, wherein said lysosomal enzyme is a Human glucocerebrosidase.
27. The system of claim 26, wherein said human glucocerebrosidase has an amino acid sequence as set forth in SEQ ID NO: 8.
28. The system of claim 26, wherein said human glucocerebrosidase further comprises an N-terminus endoplasmic reticulum signal peptide.
29. The system of claim 26, wherein said human glucocerebrosidase further comprises a C-terminus vacuolar targeting signal peptide.
30. The system of claim 26, wherein said human glucocerebrosidase has an amino acid sequence as set forth in SEQ ID NO: 14.
31. A method for producing a recombinant protein in plant cells axenically cultured in at least one disposable device, the method comprising: providing the system of any of claims 1-18; and; providing axenic inoculant via said harvester; providing sterile said culture medium and/or, sterile additives; illuminating said container with external light; and allowing said cells to grow in said medium to a desired yield; and harvesting said cells expressing said recombinant protein from said cells or medium, wherein said recombinant protein is selected from the group consisting of a prokaryotic protein, a viral protein a eukaryotic protein and a chimeric protein.
32. The method of claim 31 , wherein said plant cells are carrot cells.
33. The method of claim 31 wherein said viral protein is the infectious bursal disease virus viral protein VPII. 76 177586/3
34. The method of claim 31, wherein said eukaryotic protein is Human interferon β.
35. The method of claim 31, wherein said eukaryotic protein is a Human clotting factor.
36. The method of claim 31, wherein said clotting factor is Human Factor X.
37. The method claim 31, wherein said eukaryotic protein is a Human lysosomal enzyme.
38. The method of claim 37, wherein said human lysosomal enzyme is glucocerebrosidase.
39. The method of claim 38, wherein said human glucocerebrosidase has an amino acid sequence as set forth in SEQ ID NO: 8.
40. The method of claim 38, wherein said human glucocerebrosidase further comprises an N-terminus endoplasmic reticulum signal peptide.
41. The method of claim 38, wherein said human glucocerebrosidase further comprises a C-terminus vacuolar targeting signal peptide.
42. The method of claim 38, wherein said human glucocerebrosidase has an amino acid sequence as set forth in SEQ ID NO: 14.
43. An axenic culture of plant cells genetically modified to express a recombinant protein cultured according to the method of any of claims 31-42.
44. The system of any one of claims 26 to 30, wherein said said plant cells are carrot cells. 77 177586/3
45. The method of any one of claims 38 to 42, wherein said plant cells are carrot cells. Patent Attorney G. E. Ehrlich (1995) Ltd. 11 Menachem Begin Street 52 521 Ramat-Gan
IL177586A 2004-02-24 2006-08-20 Plant cell/tissue culturing system and method IL177586A (en)

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US10/784,295 US20050032211A1 (en) 1996-09-26 2004-02-24 Cell/tissue culturing device, system and method
PCT/IL2005/000228 WO2005080544A2 (en) 2004-02-24 2005-02-24 Cell/tissue culturing device, system and method
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