CN108133512B - Magnetic resonance scanning-based visual three-dimensional imaging method for fetal body surface structure - Google Patents

Magnetic resonance scanning-based visual three-dimensional imaging method for fetal body surface structure Download PDF

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CN108133512B
CN108133512B CN201711380521.4A CN201711380521A CN108133512B CN 108133512 B CN108133512 B CN 108133512B CN 201711380521 A CN201711380521 A CN 201711380521A CN 108133512 B CN108133512 B CN 108133512B
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肖连祥
张翼
丁蕾
魏新红
林祥涛
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Abstract

The invention discloses a magnetic resonance scanning-based visual three-dimensional imaging method for a fetal body surface structure, which comprises the following steps of: s1 fetus magnetic resonance data acquisition, S2 data conversion, S3 three-dimensional post-processing, S4 fetus body surface structure three-dimensional imaging, and volume rendering display is completed by applying a ray projection method, so that the color value of the pixel point on the screen is calculated. The invention utilizes a real steady-state free precession gradient echo sequence and the existing magnetic resonance imaging hardware facility to acquire the three-dimensional data of the tissue structure of the interest of the fetus, generates new data containing the histological characteristics of the fetus by data processing, and utilizes three-dimensional post-processing software to carry out surface reconstruction on the new data to obtain a three-dimensional image of the body surface structure of the fetus.

Description

Magnetic resonance scanning-based visual three-dimensional imaging method for fetal body surface structure
Technical Field
The invention relates to the technical field of medical imaging, in particular to a magnetic resonance scanning-based visual three-dimensional imaging method for a fetal body surface structure.
Background
At present, the three-dimensional imaging of the body surface structure of the fetus can be obtained only by means of three-dimensional or four-dimensional ultrasonic imaging, and fig. 1 is a fetus face image obtained by the current three-dimensional ultrasonic imaging; the technical means is single, the ultrasonic imaging condition is influenced by a plurality of factors such as the body position of the fetus, the structural shielding, the amount of amniotic fluid and the like, and a satisfactory three-dimensional image of the body surface of the fetus cannot be obtained sometimes. In addition, positive findings from ultrasound examination also lack the evidence and support of other image examinations.
Magnetic resonance scanning is safe, free of radiation and high in tissue resolution, and is widely applied to prenatal disease diagnosis of fetuses at present, but due to the characteristics of imaging signals, a method for performing surface shielding imaging and maximum intensity projection on a fetal body surface structure in a three-dimensional post-processing process is difficult, so that a magnetic resonance examination-based fetal body surface structure three-dimensional image is difficult to obtain by a conventional method.
Disclosure of Invention
The invention aims to solve the defects in the prior art, and provides a magnetic resonance scanning-based fetal body surface structure visualization three-dimensional imaging method.
In order to achieve the purpose, the invention adopts the following technical scheme:
a magnetic resonance scanning-based visual three-dimensional imaging method for a fetal body surface structure comprises the following steps:
s1, acquiring magnetic resonance data of the fetus, and adding a scanning technology and a scanning direction to a real steady free precession gradient echo sequence; the pregnant woman takes a supine position, feet are advanced or the head is advanced, an abdomen soft coil is adopted to cover the middle abdomen and the lower abdomen, a single-excitation fast spin echo T2 weighted image sequence is adopted to carry out 3 conventional magnetic resonance imaging of the head cross position, the vector position and the coronary position of the fetus, and the three-dimensional scanning positioning and the observation of the facial structure of the fetus are carried out; performing fetal maxillofacial coronal region scanning by using a real steady-state free precession gradient echo sequence, and performing post-processing and reconstruction by using image data of the coronal real steady-state free precession gradient echo sequence;
s2 data conversion, sequentially reading each DICOM image in the MRI scanning sequence, obtaining each pixel gray value g, and counting to obtain the maximum gray value gmaxSetting the gray scale of the image pixel after conversion as g',then g ═ gmax-g, combining the pixel matrix formed by g ' with the ' header information ' of the original DICOM file to regenerate a new DICOM file sequence;
s3, three-dimensional post-processing, namely stacking the new image sequence after data conversion into three-dimensional data by taking the new image sequence as a visual data source;
s4, performing three-dimensional imaging on the body surface structure of the fetus, completing volume rendering display by applying a ray projection method, emitting light from each pixel point on a screen, emitting a ray according to the set viewpoint direction and position, wherein the ray penetrates through a volume data space, performing equidistant sampling between the ray and the intersection point of the volume space, and calculating the opacity value and the color value of each sampling point by performing trilinear interpolation on the color value and the opacity of 8 voxels nearest to the sampling point; after the color values and the opacity values of all sampling points on the ray are calculated, the light intensity in the given optical model is calculated and synthesized with the results of the previous sampling points, so that the color value of the pixel point on the screen is calculated.
Preferably, the sequence parameters of the MRI scan sequence in S1 are: TR/TE: 556.60ms-612.00ms/1.80ms-1.93ms, FOV: 310 × 380, Metrix: 174 × 304, flibangle: 79, Bandwidth: 484HZ/Px, layer thickness 4mm, interval-50% to-80%: scanning time: 12s-18 s. The invention utilizes a real steady-state free precession gradient echo sequence and the existing magnetic resonance imaging hardware facility to acquire the three-dimensional data of the tissue structure of the interest of the fetus, generates new data containing the histological characteristics of the fetus by data processing, and utilizes three-dimensional post-processing software to carry out surface reconstruction on the new data to obtain a three-dimensional image of the body surface structure of the fetus.
The invention provides a new fetus body surface three-dimensional imaging method except ultrasonic; is the innovation of the necessary supplement of the existing ultrasonic three-dimensional imaging and the processing of the magnetic resonance imaging data; has important significance for prenatal diagnosis of fetus (such as facial deformity, cleft lip and palate, etc.). At present, the method is applied to successfully obtain the three-dimensional image of the face of the fetus, the image quality is excellent, the diagnosis of the facial deformity of the fetus can be met, and the image is visual, clear in display and wide in application prospect.
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FIG. 1 is a current three-dimensional ultrasound acquired facial image of a fetus;
figure 2 is a conventional magnetic resonance image;
FIG. 3 is an image obtained by conventional three-dimensional post-processing of magnetic resonance;
fig. 4 is a 26-week normal fetus maxillofacial image obtained by the method of the present invention;
FIG. 5 is a maxillofacial image of a fetus with 22 weeks gestation unilateral cleft labial and palatal, showing the position and size of cleft labial surface by arrows;
FIG. 6 is a schematic view of the present invention using ray casting.
Detailed Description
The technical solutions in the embodiments of the present invention will be clearly and completely described below with reference to the drawings in the embodiments of the present invention, and it is obvious that the described embodiments are only a part of the embodiments of the present invention, and not all of the embodiments.
Referring to fig. 2-5, the invention provides a magnetic resonance scanning-based fetal body surface structure visualization three-dimensional imaging method, which comprises the following steps:
and S1, acquiring magnetic resonance data of the fetus, wherein the magnetic resonance data of the fetus can be acquired by using various existing magnetic resonance scanners, and technicians can master the technical field of scanning through simple training.
MRI scan and data acquisition requirements:
MRI scan sequence: the method comprises the steps that a real steady-state free precession gradient echo sequence is provided, the scanning sequence is configured for each machine type of a mainstream magnetic resonance manufacturer at present, and a scanning technology and a scanning direction are added; magnetic resonance scanning techniques (maxillofacial imaging for example): the pregnant woman takes a supine position, feet are advanced or the head is advanced, the middle abdomen and the lower abdomen are covered by adopting an abdomen flexible coil (adjusted according to the position of an interested region), 3 conventional magnetic resonance imaging of the head transverse position, the vector position and the coronal position of the fetus are carried out by adopting a single-excitation fast spin echo T2 weighted image sequence for observing the facial structure and three-dimensional scanning and positioning of the fetus, and the coronal position of the jaw face of the fetus is scanned by adopting a real steady free precession gradient echo T2 weighted image sequence.
Sequence parameters: TR/TE: 556.60ms-612.00ms/1.80ms-1.93ms, FOV: 310 × 380, Metrix: 174 × 304, flibangle: 79, Bandwidth: 484HZ/Px, layer thickness 4mm, interval-50% to-80%: scanning time: 12s-18 s. And (3) carrying out post-processing and reconstruction by using coronary true steady-state free precession gradient echo T2 weighted image sequence image data.
S2 data conversion: sequentially reading each DICOM image in the MRI scanning sequence, acquiring the gray value g of each pixel, and counting to obtain the maximum gray value gmaxIf the gray scale of the image pixel after conversion is g ', g' is g ═ gmax-g. And combining the pixel matrix formed by g ' with the ' header information ' of the original DICOM file to regenerate a new DICOM file sequence.
And S3, performing three-dimensional post-processing, and stacking the new image sequence after data conversion into three-dimensional data by taking the new image sequence as a visual data source.
S4, performing three-dimensional imaging on the surface structure of the fetus, and completing Volume Rendering (VR) display by using a ray casting method. The principle is as shown in fig. 6, each pixel point on the screen emits light, a ray is emitted according to the set viewpoint direction and position, the ray penetrates through the volume data space, equidistant sampling is carried out between the intersection point of the ray and the volume space, and the opacity value and the color value of each sampling point are calculated by carrying out trilinear interpolation on the color value and the opacity of 8 voxels nearest to the sampling point. After the color values and the opacity values of all sampling points on the ray are calculated, the light intensity in the given optical model is calculated and synthesized with the results of the previous sampling points, so that the color value of the pixel point on the screen is calculated.
According to the light combination mode, the combination is divided into two combination modes from back to front and from front to back. Let c be the light intensity and opacity before the ray passes through the voxelin,αin(ii) a The exit voxel is cout,αoutSampling point is s1,s2......sn。
The combination of light from back to front
cout＝c(si)*α(si)+cin(1-αin)
Wherein C(s)0)＝Cbackground,α(s0)＝1。
The light is combined from front to back into
Figure BDA0001515502260000051
αout＝αin+α(si)(1-αin)
Wherein, during the process of accumulating the light from front to back, when alpha is foundoutWhen the sum is more than 1, accumulation is stopped, and meaningless calculation is avoided.
The above description is only for the preferred embodiment of the present invention, but the scope of the present invention is not limited thereto, and any person skilled in the art should be considered to be within the technical scope of the present invention, and the technical solutions and the inventive concepts thereof according to the present invention should be equivalent or changed within the scope of the present invention.

Claims (2)

1. The magnetic resonance scanning-based visual three-dimensional imaging method for the fetal body surface structure is characterized by comprising the following steps of:
s1, acquiring magnetic resonance data of the fetus, and adding a scanning technology and a scanning direction to a real steady free precession gradient echo sequence; the pregnant woman takes a supine position, feet are advanced or the head is advanced, the abdomen soft coil is adopted to cover the middle abdomen and the lower abdomen, a single-excitation fast spin echo T2 weighted image sequence is adopted to carry out 3 orthogonal magnetic resonance imaging of the head cross position, the vector position and the coronal position of the fetus, and the three-dimensional scanning positioning and the observation of the facial structure of the fetus are realized; performing fetal maxillofacial coronal region scanning by using a real steady-state free precession gradient echo sequence, and performing post-processing and reconstruction by using image data of the coronal real steady-state free precession gradient echo sequence;
s2 data conversion, sequentially reading each DICOM image in the MRI scanning sequence, obtaining each pixel gray value g, and counting to obtain the maximum gray value gmaxIf the gray scale of the image pixel after conversion is g ', g' is g ═ gmax-g, combining the pixel matrix formed by g ' with the ' header information ' of the original DICOM file to regenerate a new DICOM file sequence;
s3, three-dimensional post-processing, namely stacking the new image sequence after data conversion into three-dimensional data by taking the new image sequence as a visual data source;
s4, performing three-dimensional imaging on the body surface structure of the fetus, completing volume rendering display by applying a ray projection method, emitting light from each pixel point on a screen, emitting a ray according to the set viewpoint direction and position, wherein the ray penetrates through a volume data space, performing equidistant sampling between the ray and the intersection point of the volume space, and calculating the opacity value and the color value of each sampling point by performing trilinear interpolation on the color value and the opacity of 8 voxels nearest to the sampling point; after the color values and the opacity values of all sampling points on the ray are calculated, the light intensity in the given optical model is calculated and synthesized with the results of the previous sampling points, so that the color value of the pixel point on the screen is calculated;
according to the light combination mode, the combination is divided into two combination modes from back to front and from front to back, and the light intensity and opacity value before the light ray passes through the voxel are set as cin,αin(ii) a The exit voxel is cout,αoutSampling point is s1,s2......sn；
The combination of light from back to front
cout＝c(si)*α(si)+cin(1-αin)
Wherein c(s)0)＝cbackground,α(s0)＝1；
The light is combined from front to back into
Figure FDA0003015708120000021
αout＝αin+α(si)(1-αin)
Wherein, during the process of accumulating the light from front to back, when alpha is foundoutWhen > 1, stop accumulating.
2. The method for three-dimensional visualization of the body surface structure of the fetus based on the magnetic resonance scanning as claimed in claim 1, wherein the sequence parameters of the MRI scanning sequence in S1 are as follows: TR/TE: 556.60ms-612.00ms/1.80ms-1.93ms, FOV: 310 × 380, Metrix: 174 × 304, flibangle: 79, Bandwidth: 484HZ/Px, layer thickness 4mm, interval-50% to-80%: scanning time: 12s-18 s.
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