Embodiment
One, the screening of bacterial strain
1. screening process
The cud of butchering from the goat of raising, gather bacterium sample, the specified conditions of 37 ± 5 ℃ of external employings, anaerobism, lucifuge carry out directive breeding, repeatedly rule separation and purification to single strain L-01 domestication by agar plate subregion, study its morphology and biological characteristics.Observe colony characteristics, electron microscope observation single strain form and relevant key enzyme vitality test by agar plate culture.
The configuration of 1.1 work mother liquors:
First following table ratio is equipped with nutrition substrate:
Composition | Weight percent (%) |
Corn | 80 |
Dregs of beans | 6 |
Wheat bran | 10 |
Salt | 1 |
Stone flour | 1 |
Secondary calcium phosphate | 2 |
Take nutrition substrate 125g(2600r/min in 5% ratio again and pulverize 1.5min) mix with water, digestion 1h under electromagnetic oven boiling state, after twice of two-layer gauze extracting, after extract 2600r/min liquid making beating 1.5min, 500 order nylon-tissue bag are filtered, finally be settled to 2.5L, obtain work mother liquor.
1.2 artificial medium compositions: the formula with reference to Russell is improved.
Reductive agent (matching while using): 1N NaOH solution 4mL; Na
2s7H
2o 570mg adding distil water is to 100mL.
Major element: Na
2hPO
45.70g; NaH
2pO
46.20g; MgSO
47H
2o 0.60g adding distil water is to 1000mL.
Trace element: CaCl
22H
2o 13.20g; MnCl
24H2O 10.00g; CoCl
26H
2o 1.00g; FeCl
36H
2o 0.8g adding distil water is to 100mL.
Damping fluid: NaHCO
335.00g; NH
4hCO
34.00g; Adding distil water is to 1000mL.
Nutrient solution preparation: major element 237mL; Trace element 0.12mL; Damping fluid 237mL; Reductive agent 49.5mL; Glucose 10g, adding distil water is to 1000mL.
1.3 culture medium prescription
Extractum carnis 0.9g, peptone 3g, NaCI 1.5g, agar 10.5g, adds work mother liquor 300mL, supplements artificial medium to 600mL.
The cultural method of 1.4 bacterium separation and purification
Above-mentioned solid medium is taken in Erlenmeyer flask according to formula, be placed on universal electric furnace and be heated to boiling, cover ventilative sieve and after autoclaving 20min, take out at 121 ℃, a kind of rhyme scheme in Chinese operas serving as the prelude to a complete score for voices after temperature is down to 50 ℃ of left and right, about 10-20min solidifies.
The cud of butchering from the goat of raising, gather bacterium sample, and by sterile saline doubling dilution to 10 for this rumen bacteria liquid
-8power, then separates with transfering loop picking bacterium liquid sectional streak on solid medium, cultivates in 37 ± 5 ℃ of envrionment temperatures, anaerobism lucifuge, and after colony growth goes out, the different bacterium colonies of picking are proceeded to rule and separated, until purifying agaric.
2. the morphology of bacterial strain research
Above-mentioned screening obtained strains on solid medium photo as Fig. 5, MRS substratum, 37 ℃, cultivate colonial morphology 1 day: oyster white, circle, tip-like, smooth surface, projection, opaque, neat in edge.Oil Microscopic observation is spherical, and diameter is about 0.6 μ m, and paired or heap shape is arranged, Gram-positive (as Fig. 4).By 15000 times of known this bacterium diameter of S-4800 field emission scanning electron microscope photo 0.5~0.8um(as Fig. 2,3).
As seen from Figure 1: this bacterium is visible faint yellow circular small colonies on solid medium.
Two, the evaluation of bacterial strain
The molecular biology identification of 1 sequence amplification
The extraction of 1.1 bacterial genomes DNA
Bacterial classification is 12~18 h that grow in enrichment liquid body is cultivated, and get 1.5 mL bacterium liquid and are placed in EP pipe, and centrifugal 5 min of 5000 r/min, extract bacterial genomes DNA.
The amplimer of 1.2 bacterial strain 16SrDNA:
Use 16SrDNA universal primer to increase, by Dalian, precious biotechnology company limited is synthetic.
Reaction system: 0.25uL Taq DNA polysaccharase, 5uLl0 × PCR reaction buffer, 4uL dNTP MasterMix, luLPrimer F (upstream primer), l uL Primer R (downstream primer), 2uL template DNA, ddH
2o supplies 50uL.
PCR reaction conditions: 94 ℃ of denaturation 5 min; 94 ℃ of sex change 30 S, 55 ℃ of annealing 40 S, 72 ℃ are extended 90 S, 30 circulations; 72 ℃ are extended 10 min eventually.
The mensuration of 1.3 PCR products detections and l6S rDNA sequence
After 20g/L agarose gel electrophoresis, under ultraviolet lamp, observe, if there is the single band of 1.5 kb left and right, prove successfully to increase target l6S rDNA sequence.Mail pcr amplification product to Shanghai Sangon Biological Engineering Technology And Service Co., Ltd order-checking, then the 16SrDNA sequence obtaining is submitted to and in NCBI nucleic acid database, carries out BLAST on-line analysis.
2 bacterial strain pheS gene primers and PCR reaction conditions
PheS: primer is synthetic by Dalian precious biotechnology company limited.
pheS-21-F CAYCCNGCHCGYGAYATGC;
pheS-22-R CCWARVCCRAARGCAAARCC。
PCR reaction conditions: 94 ℃ of denaturation 5 min; 94 ℃ of sex change 30 S, 50 ℃ of annealing 40 S, 72 ℃ are extended 40 S, 30 circulations; 72 ℃ are extended 10 min eventually.
The structure of 3 sequential analyses and genealogical tree
Adopt MEGA4.1 software, ortho position connection method shows bacterial classification and the relevant sequential system growth tree of planting, and carries out the Bootstraps statistical test repeating for 1000 times.
4 identification and analysis results
4.1 faecium L-01 grow tree to the 16S rDNA sequential system of relevant kind:
Adopt MEGA4.1 software, ortho position connection method shows L-01 and relevant 16S rDNA phylogenetic tree of planting, and carries out the similarity double counting of 1000 times, in figure, grow tree node and only show that Bootstrap value is greater than 50% numerical value, (
e., Enterococcus).
Shown by Fig. 9 Phylogenetic Analysis: bacterial strain L-01 and enterococcus spp (
enterococcussp.) in multiple kinds gather in a phylogeny branch, sequence homology is more than 98.3%, wherein with
e.faeciumaTCC 19434
t(DQ411813) sequence homology is up to 99.9%.
Through identifying, the 16S rDNA sequence length of faecium L-01 is 1482bp, and qualification result is enterococcus spp.
4.2 faecium L-01 are to relevant kind
pheSgene order phylogenetic tree:
Adopt MEGA4.1 software, ortho position connection method shows L-01 and relevant kind
pheSphylogenetic Tree, carries out the similarity double counting of 1000 times, grows tree node and only show that Bootstrap value is greater than 50% numerical value in figure.
Shown by Figure 10 Phylogenetic Analysis: bacterial strain L-01 and faecium (
enterococcus faecium) gather in a phylogeny branch, sequence homology is 97.4%, with the sequence homology of other enterococcus spp bacterial classification type strain below 86.6%.
Through identifying, faecium L-01's
pheSgene order length is 509bp, and qualification result is faecium.
Three, faecium L-01 bacterial strain enzymic activity dynamic studies
1. the mensuration of alpha-amylase activity in bacterium liquid
Measuring method: iodine-starch colorimetry determination of amylase test kit (Bioengineering Research Institute is built up in Nanjing)
α-amylase (AMS) unit of activity definition: the amylase (AMS) in 100mL bacterium liquid, 39 ℃ with substrate-function 30 minutes, hydrolysis 10mg starch is 1 unit.Alpha-amylase activity temporal evolution is shown in that Fig. 6 is known, and in the enzyme activity dynamic changing process of 0-12 h, alpha-amylase activity continues to raise in 8-12 h dynamic changing process.
2. the mensuration of α-glucose transglucosidase vigor in bacterium liquid-chromophoric substrate is measured α-glucose transglucosidase vigor
Make reaction substrate with colourless p-NP-alpha-D-glucose glycosides (pNPG), through α-glucose transglucosidase hydrolyzing alpha-1, after 4-glucoside bond, discharge p-NP (pNP), under alkaline condition, the latter is yellow, the finally criterion as the active size of α-Isosorbide-5-Nitrae-glucose transglucosidase by the pNP generation under monitoring 405 or 410 nm.
1) preparation of reagent:
(1) 1.25mmol/L p-NP-alpha-D-glucose glycosides (pNPG) solution: 75.2mg pNPG is dissolved in 200mL
In 0.05mol/L acetate buffer (pH5.6).
(2) 4mmol/L p-NP (pNP) solution: 111.3mg pNP is dissolved in 200mL 0.05mol/L acetate buffer (pH5.6).
(3) 0.05mol/L acetate buffer (pH5.6): 16.4g sodium acetate adds 12mL acetic acid, is settled to 1000mL.
(4) 1mol/L sodium carbonate solution.
2) make p-NP typical curve
Get respectively the p-NP (4mmol/L) of different volumes by upper table, be diluted to a series of concentration with 50mmol/L acetate buffer (pH5.6).Then on spectrophotometer, measure the optical density(OD) at 410nm place, take concentration as X-coordinate, absorption photometric value is that ordinate zou is made curve.
The typical curve of p-NP is as Fig. 7.
3) mensuration of α-Isosorbide-5-Nitrae-glucose transglucosidase vigor
Get 0.8mL p-NP-alpha-D-glucose glycosides (pNPG) (1.25mmol/L), add 0.2mL bacterium liquid, after mixing rapidly, in 58 ℃ of water-baths, be incubated 10min, take out and add immediately the sodium carbonate solution termination reaction of 2mL 1mol/L, by the optical density(OD) at spectrophotometric determination 410nm wavelength place, on typical curve, find the amount that is equivalent to p-NP, and calculate enzyme activity.
Enzyme activity unit is defined as: the α-glucose transglucosidase in 1L bacterium liquid, 58 ℃ with p-NP-α-D glucoside effect 10 minutes, it is 1 unit of activity that per minute catalysis forms the needed enzyme amount of 1umoL p-NP.
Enzyme activity=(A × n)/(V × t);
V-enzyme liquid measure (mL) in formula; N-enzyme liquid extension rate; T-reaction times (min).
α-glucose transglucosidase vigor temporal evolution is shown in Fig. 8, and as shown in Figure 8, in the enzyme activity dynamic changing process of 0-12 h, α-glucose transglucosidase vigor continues to raise in the dynamic changing process of 8-12 h.
Sum up: by above test, prove that faecium L-01 of the present invention has genetic stability good, bacterial strain is energetic, the amylase of secretion and the high characteristic of the enzyme activity of transglucosidase.
Due to above feature, the present invention is expected to be applied to the fodder additives of preparation animal, cultivated animals, and pig, bird, ruminating animal, aquatic animal, can effectively replace microbiotic, performance diseases prevention, resistant effect.
Lv Bao bio tech ltd, <110> Yangzhou
<120> faecium L-01 and preparation method thereof
<160>2
<210>1
<211>1482
<212>DNA
<213> artificial sequence
<220>
The 16S rDNA sequence of <223> faecium L-01 bacterial strain
<400>1
gacgaacgct ggcggcgtgc ctaatacatg caagtcgaac gcttcttttt ccaccggagc 60
ttgctccacc ggaaaaagag gagtggcgaa cgggtgagta acacgtgggt aacctgccca 120
tcagaagggg ataacacttg gaaacaggtg ctaataccgt ataacaatcn aaaccgcatg 180
gttttgattt gaaaggcgct ttcgggtgtc gctgatggat ggacccgcgg tgcattagct 240
agttggtgag gtaacggctc accaaggcca cgatgcatag ccgacctgag agggtgatcg 300
gccacattgg gactgagaca cggcccaaac tcctacggga ggcagcagta gggaatcttc 360
ggcaatggac gaaagtctga ccgagcaacg ccgcgtgagt gaagaaggtt ttcggatcgt 420
aaaactctgt tgttagagaa gaacaaggat gagagtaact gttcatccct tgacggtatc 480
taaccagaaa gccacggcta actacgtgcc agcagccgcg gtaatacgta ggtggcaagc 540
gttgtccgga tttattgggc gtaaagcgag cgcaggcggt ttcttaagtc tgatgtgaaa 600
gcccccggct caaccgggga gggtcattgg aaactgggag acttgagtgc agaagaggag 660
agtggaattc catgtgtagc ggtgaaatgc gtagatatat ggaggaacac cagtggcgaa 720
ggcggctctc tggtctgtaa ctgacgctga ggctcgaaag cgtggggagc aaacaggatt 780
agataccctg gtagtccacg ccgtaaacga tgagtgctaa gtgttggagg gtttccgccc 840
ttcagtgctg cagctaacgc attaagcact ccgcctgggg agtacgaccg caaggttgaa 900
actcaaagga attgacgggg gcccgcacaa gcggtggagc atgtggttta attcgaagca 960
acgcgaagaa ccttaccagg tcttgacatc ctttgaccac tctagagata gagcttcccc 1020
ttcgggggca aagtgacagg tggtgcatgg ttgtcgtcag ctcgtgtcgt gagatgttgg 1080
gttaagtccc gcaacgagcg caacccttat tgttagttgc catcattcag ttgggcactc 1140
tagcaagact gccggtgaca aaccggagga aggtggggat gacgtcaaat catcatgccc 1200
cttatgacct gggctacaca cgtgctacaa tgggaagtac aacgagttgc gaagtcgcga 1260
ggttaagcta atctcttaaa gcttttctca gttcggattg caggctgcaa ctcgcctgca 1320
tgaagccgga atcgctagta atcgcggatc agcacgccgc ggtgaatacg ttcccgggcc 1380
ttgtacacac cgcccgtcac accacgagag tttgtaacac ccgaagtcgg tgaggtaacc 1440
ttttgagcca gccgcctaag gtgggataga tgattggggt gg
<210>2
<211>509
<212>DNA
<213> artificial sequence
<220>
The pheS gene order of <223> faecium L-01 bacterial strain
<400>2
catattatat atgacccgag tattatcatc cgggcccgat atgcaagata ctttctatat 60
ttcagacgag atattgattc ggacacatac ttcaccagtc caagcacgga caatggaaaa 120
gcatgatttc tctaagggtg ctctacgaat gatctcgcct ggaaaagttt tccgcagaga 180
tacagatgat gcgacccaca gccatcagtt ccatcaaatt gaagggctag ttgttgataa 240
aaacatcacg atgggcgatc ttaaaggaac attagaagtc gtaatgaaaa aaatgtttgg 300
ggaagatcgt gaaatccgtt tgcgtccaag ttatttccca tttacggagc catcagtaga 360
agtagatgtc agttgtttca aatgtggtgg tgccggttgt aacgtatgta aatacactgg 420
atggatcgag attttaggag ctggcatggt gcacccgaat gtgttgaaga tgtcaggaat 480
cgatccagaa gaatattcag gttttgctt