AU5479599A - Methods and systems for sequencing dna by distinguishing the decay times of fluorescent probes - Google Patents
Methods and systems for sequencing dna by distinguishing the decay times of fluorescent probesInfo
- Publication number
- AU5479599A AU5479599A AU54795/99A AU5479599A AU5479599A AU 5479599 A AU5479599 A AU 5479599A AU 54795/99 A AU54795/99 A AU 54795/99A AU 5479599 A AU5479599 A AU 5479599A AU 5479599 A AU5479599 A AU 5479599A
- Authority
- AU
- Australia
- Prior art keywords
- distinguishing
- systems
- methods
- fluorescent probes
- decay times
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (9)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US12206498P | 1998-08-11 | 1998-08-11 | |
US13255498A | 1998-08-11 | 1998-08-11 | |
US13218198A | 1998-08-11 | 1998-08-11 | |
US09132181 | 1998-08-11 | ||
US60122064 | 1998-08-11 | ||
US09132554 | 1998-08-11 | ||
US09/213,297 US6447724B1 (en) | 1998-08-11 | 1998-12-15 | DNA sequencing using multiple fluorescent labels being distinguishable by their decay times |
US09213297 | 1998-12-15 | ||
PCT/US1999/018294 WO2000009753A1 (en) | 1998-08-11 | 1999-08-11 | Methods and systems for sequencing dna by distinguishing the decay times of fluorescent probes |
Publications (1)
Publication Number | Publication Date |
---|---|
AU5479599A true AU5479599A (en) | 2000-03-06 |
Family
ID=27494406
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AU54795/99A Abandoned AU5479599A (en) | 1998-08-11 | 1999-08-11 | Methods and systems for sequencing dna by distinguishing the decay times of fluorescent probes |
Country Status (3)
Country | Link |
---|---|
EP (1) | EP1104491A4 (en) |
AU (1) | AU5479599A (en) |
WO (1) | WO2000009753A1 (en) |
Families Citing this family (36)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5989402A (en) | 1997-08-29 | 1999-11-23 | Caliper Technologies Corp. | Controller/detector interfaces for microfluidic systems |
US6756019B1 (en) | 1998-02-24 | 2004-06-29 | Caliper Technologies Corp. | Microfluidic devices and systems incorporating cover layers |
US6780591B2 (en) | 1998-05-01 | 2004-08-24 | Arizona Board Of Regents | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US7875440B2 (en) | 1998-05-01 | 2011-01-25 | Arizona Board Of Regents | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
WO1999064836A1 (en) | 1998-06-08 | 1999-12-16 | Caliper Technologies Corp. | Microfluidic devices, systems and methods for performing integrated reactions and separations |
AU3372800A (en) | 1999-02-23 | 2000-09-14 | Caliper Technologies Corporation | Manipulation of microparticles in microfluidic systems |
WO2000070080A1 (en) | 1999-05-17 | 2000-11-23 | Caliper Technologies Corp. | Focusing of microparticles in microfluidic systems |
US6592821B1 (en) | 1999-05-17 | 2003-07-15 | Caliper Technologies Corp. | Focusing of microparticles in microfluidic systems |
EP1185871A4 (en) | 1999-06-01 | 2003-01-15 | Caliper Techn Corp | Microscale assays and microfluidic devices for transporter, gradient induced, and binding activities |
US6613580B1 (en) | 1999-07-06 | 2003-09-02 | Caliper Technologies Corp. | Microfluidic systems and methods for determining modulator kinetics |
US6858185B1 (en) | 1999-08-25 | 2005-02-22 | Caliper Life Sciences, Inc. | Dilutions in high throughput systems with a single vacuum source |
US6613581B1 (en) | 1999-08-26 | 2003-09-02 | Caliper Technologies Corp. | Microfluidic analytic detection assays, devices, and integrated systems |
WO2001027253A1 (en) | 1999-10-08 | 2001-04-19 | Caliper Technologies Corp. | Use of nernstein voltage sensitive dyes in measuring transmembrane voltage |
US6468761B2 (en) | 2000-01-07 | 2002-10-22 | Caliper Technologies, Corp. | Microfluidic in-line labeling method for continuous-flow protease inhibition analysis |
US7037416B2 (en) | 2000-01-14 | 2006-05-02 | Caliper Life Sciences, Inc. | Method for monitoring flow rate using fluorescent markers |
US6556923B2 (en) * | 2000-01-26 | 2003-04-29 | Caliper Technologies Corp. | Software for high throughput microfluidic systems |
US20020012971A1 (en) | 2000-03-20 | 2002-01-31 | Mehta Tammy Burd | PCR compatible nucleic acid sieving medium |
US6733645B1 (en) | 2000-04-18 | 2004-05-11 | Caliper Technologies Corp. | Total analyte quantitation |
EP1281002A4 (en) | 2000-05-11 | 2006-08-09 | Caliper Life Sciences Inc | Microfluidic devices and methods to regulate hydrodynamic and electrical resistance utilizing bulk viscosity enhancers |
US6777184B2 (en) | 2000-05-12 | 2004-08-17 | Caliper Life Sciences, Inc. | Detection of nucleic acid hybridization by fluorescence polarization |
EP1315570A4 (en) | 2000-08-03 | 2006-12-13 | Caliper Life Sciences Inc | Methods and devices for high throughput fluid delivery |
CA2425112C (en) | 2000-10-06 | 2011-09-27 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding dna and rna |
US9708358B2 (en) | 2000-10-06 | 2017-07-18 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US20090118139A1 (en) | 2000-11-07 | 2009-05-07 | Caliper Life Sciences, Inc. | Microfluidic method and system for enzyme inhibition activity screening |
US7723123B1 (en) | 2001-06-05 | 2010-05-25 | Caliper Life Sciences, Inc. | Western blot by incorporating an affinity purification zone |
WO2002103210A1 (en) | 2001-06-15 | 2002-12-27 | Hansford Derek J | Nanopump devices and methods |
JP2005502426A (en) | 2001-09-14 | 2005-01-27 | フランシス ジェイ マーティン | Microfabricated nanopore devices for sustained release of therapeutic agents |
US20040126765A1 (en) * | 2002-12-27 | 2004-07-01 | Adams Craig W. | Method and compositions for sequencing nucleic acid molecules |
US7169560B2 (en) | 2003-11-12 | 2007-01-30 | Helicos Biosciences Corporation | Short cycle methods for sequencing polynucleotides |
CA2557177A1 (en) | 2004-02-19 | 2005-09-01 | Stephen Quake | Methods and kits for analyzing polynucleotide sequences |
US7666593B2 (en) | 2005-08-26 | 2010-02-23 | Helicos Biosciences Corporation | Single molecule sequencing of captured nucleic acids |
DE112007002932B4 (en) | 2006-12-01 | 2015-08-06 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable, reversible, fluorescent nucleotide terminators |
EP2940029B1 (en) | 2007-10-19 | 2023-11-29 | The Trustees of Columbia University in the City of New York | Design and synthesis of cleavable fluorescent nucleotides as reversible terminators for dna sequencing by synthesis |
EP2209911B1 (en) | 2007-10-19 | 2013-10-16 | The Trustees of Columbia University in the City of New York | Dna sequencing with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators and a deoxyinosine analogue with a reversible terminator group |
KR102425257B1 (en) * | 2016-06-01 | 2022-07-27 | 퀀텀-에스아이 인코포레이티드 | Pulse Caller and Base Caller |
TWI812671B (en) | 2018-01-26 | 2023-08-21 | 美商寬騰矽公司 | Methods, systems, and non-transitory computer-readable storage media for identifying nucleotides of a nucleic acid, method and system for training a deep learning model |
Family Cites Families (10)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US4849513A (en) * | 1983-12-20 | 1989-07-18 | California Institute Of Technology | Deoxyribonucleoside phosphoramidites in which an aliphatic amino group is attached to the sugar ring and their use for the preparation of oligonucleotides containing aliphatic amino groups |
US5171534A (en) * | 1984-01-16 | 1992-12-15 | California Institute Of Technology | Automated DNA sequencing technique |
US6086737A (en) * | 1984-03-29 | 2000-07-11 | Li-Cor, Inc. | Sequencing near infrared and infrared fluorescence labeled DNA for detecting using laser diodes and suitable labels therefor |
SE8802573D0 (en) * | 1988-07-08 | 1988-07-08 | Wallac Oy | MULTI-LABEL TIME-RESOLVED FLUORESCENCE ANALYSIS OF NUCLEIC ACID SEQUENCES USING LANTHANIDE CHELATES |
JP2821050B2 (en) * | 1991-10-31 | 1998-11-05 | 浜松ホトニクス株式会社 | Nucleic acid base identification method |
IL108497A0 (en) * | 1993-02-01 | 1994-05-30 | Seq Ltd | Methods and apparatus for dna sequencing |
FI93781C (en) * | 1993-03-18 | 1995-05-26 | Wallac Oy | Biospecific multiparametric assay method |
FI101829B1 (en) * | 1995-03-07 | 1998-08-31 | Erkki Juhani Soini | Biospecific assay method |
DE19634873A1 (en) * | 1996-08-29 | 1998-03-12 | Boehringer Mannheim Gmbh | System for the differentiation of fluorescent groups of molecules by time-resolved fluorescence measurement |
EP0971038A4 (en) * | 1996-09-27 | 2000-03-29 | Lab Molecular Biophotonics | Probes for detecting polynucleotides and detection method |
-
1999
- 1999-08-11 AU AU54795/99A patent/AU5479599A/en not_active Abandoned
- 1999-08-11 EP EP99941073A patent/EP1104491A4/en not_active Ceased
- 1999-08-11 WO PCT/US1999/018294 patent/WO2000009753A1/en active Application Filing
Also Published As
Publication number | Publication date |
---|---|
WO2000009753A1 (en) | 2000-02-24 |
EP1104491A4 (en) | 2003-01-29 |
EP1104491A1 (en) | 2001-06-06 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
MK6 | Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase |