AU2001286059A1 - Automated identification of peptides - Google Patents

Automated identification of peptides

Info

Publication number
AU2001286059A1
AU2001286059A1 AU2001286059A AU8605901A AU2001286059A1 AU 2001286059 A1 AU2001286059 A1 AU 2001286059A1 AU 2001286059 A AU2001286059 A AU 2001286059A AU 8605901 A AU8605901 A AU 8605901A AU 2001286059 A1 AU2001286059 A1 AU 2001286059A1
Authority
AU
Australia
Prior art keywords
peptides
automated identification
automated
identification
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2001286059A
Inventor
Andrew William Robinson
Robert Reid Townsend
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Oxford Glycosciences UK Ltd
Original Assignee
Oxford Glycosciences UK Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from GB0022136A external-priority patent/GB0022136D0/en
Application filed by Oxford Glycosciences UK Ltd filed Critical Oxford Glycosciences UK Ltd
Publication of AU2001286059A1 publication Critical patent/AU2001286059A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6848—Methods of protein analysis involving mass spectrometry
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6818—Sequencing of polypeptides
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F2218/00—Aspects of pattern recognition specially adapted for signal processing
    • G06F2218/12—Classification; Matching

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Urology & Nephrology (AREA)
  • Biomedical Technology (AREA)
  • Hematology (AREA)
  • Immunology (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Cell Biology (AREA)
  • Microbiology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Biochemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Peptides Or Proteins (AREA)
AU2001286059A 2000-09-08 2001-09-10 Automated identification of peptides Abandoned AU2001286059A1 (en)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
GB0022136A GB0022136D0 (en) 2000-09-08 2000-09-08 A method for the sequencing indentification and characterization of peptides or proteins and uses thereof
GB0022136.6 2000-09-08
US23227300P 2000-09-13 2000-09-13
US60/232,273 2000-09-13
US72440500A 2000-11-28 2000-11-28
US09/724,405 2000-11-28
PCT/GB2001/004034 WO2002021139A2 (en) 2000-09-08 2001-09-10 Automated identification of peptides

Publications (1)

Publication Number Publication Date
AU2001286059A1 true AU2001286059A1 (en) 2002-03-22

Family

ID=27255879

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2001286059A Abandoned AU2001286059A1 (en) 2000-09-08 2001-09-10 Automated identification of peptides

Country Status (3)

Country Link
EP (1) EP1317765A2 (en)
AU (1) AU2001286059A1 (en)
WO (1) WO2002021139A2 (en)

Families Citing this family (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003038728A2 (en) * 2001-11-01 2003-05-08 Biobridge Computing Ab A computer system and method using mass spectrometry data and a protein database for identifying unknown proteins
GB0212470D0 (en) * 2002-05-30 2002-07-10 Shimadzu Res Lab Europe Ltd Mass spectrometry
EP1520243A1 (en) * 2002-07-10 2005-04-06 Institut Suisse de Bioinformatique Peptide and protein identification method
ATE418729T1 (en) 2002-08-22 2009-01-15 Applera Corp METHOD FOR CHARACTERIZING BIOMOLECULES USING RESULT-DRIVEN STRATEGY
JP3817523B2 (en) * 2003-02-14 2006-09-06 株式会社日立製作所 Mass spectrometry data analysis system
GB0411687D0 (en) * 2004-05-25 2004-06-30 Oxford Gene Tech Ip Ltd Peptide mass spectrometry
DE102004051016A1 (en) * 2004-10-20 2006-05-04 Protagen Ag Method and system for elucidating the primary structure of biopolymers
ATE535535T1 (en) * 2006-02-28 2011-12-15 Phenomenome Discoveries Inc METHODS FOR DIAGNOSING DEMENTIA AND OTHER NEUROLOGICAL DISEASES
DE102006041644B4 (en) * 2006-08-23 2011-12-01 Panatecs Gmbh Method for detecting modifications in a protein or peptide
CA2620274C (en) 2007-02-08 2011-10-04 Phenomenome Discoveries Inc. Methods for the treatment of senile dementia of the alzheimer's type
US10466248B2 (en) * 2013-09-23 2019-11-05 The Trustees Of Columbia University In The City Of New York High-throughput single molecule protein identification
CN103512877B (en) * 2013-10-16 2016-03-30 长春新产业光电技术有限公司 A kind of Quick lookup method for Raman spectrum substance detection sample
US9682123B2 (en) 2013-12-20 2017-06-20 The Trustees Of Columbia University In The City Of New York Methods of treating metabolic disease
WO2017027858A1 (en) 2015-08-12 2017-02-16 The Trustees Of Columbia University In The City Of New York Methods of treating volume depletion and kidney injury
US20210063410A1 (en) * 2017-09-05 2021-03-04 Discerndx, Inc. Automated sample workflow gating and data analysis
EP3794599A4 (en) * 2018-06-11 2022-02-23 Merck Sharp & Dohme Corp. Cut vertex method for identifying complex molecule substructures

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU4228499A (en) * 1998-06-03 1999-12-20 Millennium Pharmaceuticals, Inc. Protein sequencing using tandem mass spectroscopy

Also Published As

Publication number Publication date
WO2002021139A2 (en) 2002-03-14
WO2002021139A3 (en) 2003-02-06
EP1317765A2 (en) 2003-06-11

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