AU2001251086A1 - Microchip arrays of regulatory genes - Google Patents

Microchip arrays of regulatory genes

Info

Publication number
AU2001251086A1
AU2001251086A1 AU2001251086A AU5108601A AU2001251086A1 AU 2001251086 A1 AU2001251086 A1 AU 2001251086A1 AU 2001251086 A AU2001251086 A AU 2001251086A AU 5108601 A AU5108601 A AU 5108601A AU 2001251086 A1 AU2001251086 A1 AU 2001251086A1
Authority
AU
Australia
Prior art keywords
regulatory genes
microchip arrays
microchip
arrays
regulatory
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2001251086A
Inventor
Eugenia Wang
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Sir Mortimer B Davis Jewish General Hospita
Original Assignee
Sir Mortimer B Davis Jewish General Hospita
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sir Mortimer B Davis Jewish General Hospita filed Critical Sir Mortimer B Davis Jewish General Hospita
Publication of AU2001251086A1 publication Critical patent/AU2001251086A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
    • B01J2219/00718—Type of compounds synthesised
    • B01J2219/0072—Organic compounds
    • B01J2219/00722—Nucleotides
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • C—CHEMISTRY; METALLURGY
    • C40—COMBINATORIAL TECHNOLOGY
    • C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00—Libraries per se, e.g. arrays, mixtures
    • C40B40/04—Libraries containing only organic compounds
    • C40B40/06—Libraries containing nucleotides or polynucleotides, or derivatives thereof

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Pathology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
AU2001251086A 2000-03-31 2001-03-29 Microchip arrays of regulatory genes Abandoned AU2001251086A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US19388800P 2000-03-31 2000-03-31
US60/193,888 2000-03-31
PCT/US2001/010055 WO2001075159A2 (en) 2000-03-31 2001-03-29 Microchip arrays of regulatory genes

Publications (1)

Publication Number Publication Date
AU2001251086A1 true AU2001251086A1 (en) 2001-10-15

Family

ID=22715426

Family Applications (2)

Application Number Title Priority Date Filing Date
AU2001249600A Abandoned AU2001249600A1 (en) 2000-03-31 2001-03-29 Microarrays to screen regulatory genes
AU2001251086A Abandoned AU2001251086A1 (en) 2000-03-31 2001-03-29 Microchip arrays of regulatory genes

Family Applications Before (1)

Application Number Title Priority Date Filing Date
AU2001249600A Abandoned AU2001249600A1 (en) 2000-03-31 2001-03-29 Microarrays to screen regulatory genes

Country Status (3)

Country Link
US (3) US6759197B2 (en)
AU (2) AU2001249600A1 (en)
WO (2) WO2001075162A2 (en)

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US6692916B2 (en) 1999-06-28 2004-02-17 Source Precision Medicine, Inc. Systems and methods for characterizing a biological condition or agent using precision gene expression profiles
US6960439B2 (en) 1999-06-28 2005-11-01 Source Precision Medicine, Inc. Identification, monitoring and treatment of disease and characterization of biological condition using gene expression profiles
US20060115826A1 (en) * 1999-06-28 2006-06-01 Michael Bevilacqua Gene expression profiling for identification monitoring and treatment of multiple sclerosis
US20080183395A1 (en) * 1999-06-28 2008-07-31 Michael Bevilacqua Gene expression profiling for identification, monitoring and treatment of multiple sclerosis
US20030099973A1 (en) * 2001-07-18 2003-05-29 University Of Louisville Research Foundation, Inc. E-GeneChip online web service for data mining bioinformatics
US20050064446A1 (en) * 2001-11-01 2005-03-24 Minerva Biotechnologies Corporation Detection of binding species with colloidal and non-colloidal structures
KR20040064275A (en) 2001-11-09 2004-07-16 소스 프리시전 메디슨, 인코포레이티드 Identification, monitoring and treatment of disease and characterization of biological condition using gene expression profiles
DK1918386T3 (en) * 2002-03-13 2012-01-02 Genomic Health Inc Gene expression profiles in tumor tissue biopsies
WO2003081201A2 (en) * 2002-03-21 2003-10-02 Yissum Research Development Company Of The Hebrew University Of Jerusalem Peripheral blood cell markers useful for diagnosing multiple sclerosis and methods and kits utilizing same
US20040072274A1 (en) * 2002-05-09 2004-04-15 Lebrun Stewart J. System and method for visualization and digital analysis of protein and other macromolecule microarrays
EP1570080A4 (en) * 2002-11-15 2006-03-01 Genomic Health Inc Gene expression profiling of egfr positive cancer
US20040231909A1 (en) 2003-01-15 2004-11-25 Tai-Yang Luh Motorized vehicle having forward and backward differential structure
CA2515096A1 (en) * 2003-02-06 2004-08-26 Genomic Health, Inc. Gene expression markers for response to egfr inhibitor drugs
AU2004213871B9 (en) * 2003-02-20 2009-09-03 Genomic Health, Inc. Use of intronic RNA to measure gene expression
US6970240B2 (en) * 2003-03-10 2005-11-29 Applera Corporation Combination reader
US20040265281A1 (en) * 2003-04-07 2004-12-30 Denis Rodgerson System capable of treating and defining various diseases using stem cells
JP2007507222A (en) * 2003-05-28 2007-03-29 ゲノミック ヘルス， インコーポレイテッド Gene expression markers for predicting response to chemotherapy
DE10324912A1 (en) * 2003-05-30 2005-01-05 Siemens Ag Method for the detection of DNA point mutations (SNP analysis) and associated arrangement
US20050164218A1 (en) * 2003-05-30 2005-07-28 David Agus Gene expression markers for response to EGFR inhibitor drugs
EP3470535B1 (en) 2003-06-24 2020-04-01 Genomic Health, Inc. Prediction of likelihood of cancer recurrence
US7526387B2 (en) * 2003-07-10 2009-04-28 Genomic Health, Inc. Expression profile algorithm and test for cancer prognosis
WO2005040396A2 (en) * 2003-10-16 2005-05-06 Genomic Health, Inc. qRT-PCR ASSAY SYSTEM FOR GENE EXPRESSION PROFILING
JP4718490B2 (en) 2003-12-23 2011-07-06 ジェノミック ヘルス， インコーポレイテッド General amplification of fragmented RNA
DK2163650T3 (en) * 2004-04-09 2015-11-02 Genomic Health Inc Genekspressionsmarkører for prediction of response to chemotherapy
US8173367B2 (en) * 2004-10-18 2012-05-08 Sherri Boucher In situ dilution of external controls for use in microarrays
CA2585561C (en) 2004-11-05 2018-07-17 Genomic Health, Inc. Esr1, pgr, bcl2 and scube2 group score as indicators of breast cancer prognosis and prediction of treatment response
HUE051605T2 (en) * 2004-11-05 2021-03-01 Nsabp Found Inc Predicting response to chemotherapy using gene expression markers
US20070072175A1 (en) * 2005-05-13 2007-03-29 Biogen Idec Ma Inc. Nucleotide array containing polynucleotide probes complementary to, or fragments of, cynomolgus monkey genes and the use thereof
WO2006132982A2 (en) * 2005-06-03 2006-12-14 Aviaradx, Inc. Normalization genes
US20100184614A1 (en) * 2007-05-23 2010-07-22 Zheng Ye Microarray systems and methods for identifying dna-binding proteins
ES2567094T3 (en) 2007-07-12 2016-04-19 The Brigham And Women's Hospital, Inc. Compositions and methods to diagnose and evaluate inflammatory myopathies
JP5175569B2 (en) * 2008-02-07 2013-04-03 ルネサスエレクトロニクス株式会社 Synchronous motor drive system
US20130296183A1 (en) 2010-09-17 2013-11-07 President And Fellows Of Harvard College Functional genomics assay for characterizing pluripotent stem cell utility and safety
EP3008229B1 (en) 2013-06-10 2020-05-27 President and Fellows of Harvard College Early developmental genomic assay for characterizing pluripotent stem cell utility and safety
EP3743518A4 (en) * 2018-01-24 2021-09-29 Freenome Holdings, Inc. Methods and systems for abnormality detection in the patterns of nucleic acids

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US5474796A (en) * 1991-09-04 1995-12-12 Protogene Laboratories, Inc. Method and apparatus for conducting an array of chemical reactions on a support surface
US5605662A (en) * 1993-11-01 1997-02-25 Nanogen, Inc. Active programmable electronic devices for molecular biological analysis and diagnostics
US5753431A (en) * 1993-10-13 1998-05-19 Northeastern Ohio University Cholesterol 7 α-hydroxdylase gene regulatory elements and transcription factors
US6015880A (en) * 1994-03-16 2000-01-18 California Institute Of Technology Method and substrate for performing multiple sequential reactions on a matrix
US6444463B1 (en) * 1994-05-06 2002-09-03 Fred Hutchinson Cancer Research Center Neurogenic differentiation gene neurod3 and methods for inducing differentiation of cells
US5807522A (en) * 1994-06-17 1998-09-15 The Board Of Trustees Of The Leland Stanford Junior University Methods for fabricating microarrays of biological samples
JP2001500741A (en) * 1996-09-19 2001-01-23 アフィメトリックス，インコーポレイテッド Identification of molecular sequence signatures and methods related thereto
US6013437A (en) 1996-11-12 2000-01-11 Qbi Enterprises, Ltd. Method for identifying translationally regulated genes
EP0942969A1 (en) * 1996-11-12 1999-09-22 Qbi Enterprises Ltd. Method for identifying translationally regulated genes
US6028189A (en) * 1997-03-20 2000-02-22 University Of Washington Solvent for oligonucleotide synthesis and methods of use
US5880261A (en) * 1997-04-03 1999-03-09 Waeber; Gerard Transcription factor Islet-Brain 1 (IB1)
EP0988398A4 (en) * 1997-05-21 2005-05-18 Clontech Lab Inc Nucleic acid arrays
US6444421B1 (en) * 1997-11-19 2002-09-03 The United States Of America As Represented By The Department Of Health And Human Services Methods for detecting intermolecular interactions in vivo and in vitro
AU1926899A (en) * 1997-12-19 1999-07-12 Affymetrix, Inc. Exploiting genomics in the search for new drugs
US6168915B1 (en) * 1998-04-24 2001-01-02 Diagnostic Hybrids, Inc. Mixed cell diagnostic systems
US6136541A (en) 1999-02-22 2000-10-24 Vialogy Corporation Method and apparatus for analyzing hybridized biochip patterns using resonance interactions employing quantum expressor functions
JP2004502129A (en) * 1999-04-08 2004-01-22 サー　モーティマー　ビー．　デイビス　ジュウィッシュ　ゼネラル　ホスピタル Quantitative assays for gene expression on microarrays
US6653102B2 (en) * 2000-10-17 2003-11-25 Myriad Genetics, Inc. Nucleic acid encoding a phosphatase 2C that interacts with Fe 65
KR20060002010A (en) * 2003-03-28 2006-01-06 미츠루 후루사와 Method and system for rapidly conferring a desired trait to an organism

Also Published As

Publication number Publication date
AU2001249600A1 (en) 2001-10-15
US20020009736A1 (en) 2002-01-24
WO2001075159A3 (en) 2003-01-16
US6759197B2 (en) 2004-07-06
WO2001075162A3 (en) 2003-01-16
US20040265886A1 (en) 2004-12-30
US20020012932A1 (en) 2002-01-31
WO2001075162A2 (en) 2001-10-11
US7157227B2 (en) 2007-01-02
WO2001075159A2 (en) 2001-10-11

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