WO2022029011A1 - Binding agents for coronavirus s protein - Google Patents
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- WO2022029011A1 WO2022029011A1 PCT/EP2021/071302 EP2021071302W WO2022029011A1 WO 2022029011 A1 WO2022029011 A1 WO 2022029011A1 EP 2021071302 W EP2021071302 W EP 2021071302W WO 2022029011 A1 WO2022029011 A1 WO 2022029011A1
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Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
- C07K16/1002—Coronaviridae
- C07K16/1003—Severe acute respiratory syndrome coronavirus 2 [SARS‐CoV‐2 or Covid-19]
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/14—Antivirals for RNA viruses
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
- C07K16/1002—Coronaviridae
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
- A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/30—Immunoglobulins specific features characterized by aspects of specificity or valency
- C07K2317/31—Immunoglobulins specific features characterized by aspects of specificity or valency multispecific
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
- C07K2317/71—Decreased effector function due to an Fc-modification
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
- C07K2317/73—Inducing cell death, e.g. apoptosis, necrosis or inhibition of cell proliferation
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
- C07K2317/76—Antagonist effect on antigen, e.g. neutralization or inhibition of binding
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/90—Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
- C07K2317/92—Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value
Definitions
- the present disclosure relates to a binding agent comprising a first and a second binding domain, wherein the first binding domain is capable of binding to a coronavirus spike protein (S protein) and the second binding domain is capable of binding to the coronavirus S protein, and wherein the first and second binding domains bind to different epitopes of the coronavirus S protein.
- the disclosure relates to an antibody capable of binding to a coronavirus spike protein (S protein).
- the binding agent in particular the antibody described herein binds to the SI subunit of the S protein, in particular to the receptor binding domain (RBD) of the SI subunit of the S protein.
- the disclosure also relates to a nucleic acid such as RNA encoding the binding agent, in particular antibody, disclosed herein and a host cell transformed ortransfected with said nucleic acid. Furthermore, the disclosure relates to a medical use of said binding agent, antibody, or nucleic acid.
- the agents and medical uses described herein are, in particular, useful for the prevention or treatment of coronavirus infection in a subject.
- the present disclosure relates to methods comprising administering to a subject RNA encoding the binding agent, in particular antibody, disclosed herein. Administering to the subject RNA encoding the binding agent or antibody disclosed herein may provide (following expression of the RNA by appropriate target cells) the binding agent disclosed herein for blocking or neutralizing coronavirus.
- SARS-CoV-2 severe acute respiratory syndrome coronavirus 2
- MERS Middle East respiratory syndrome
- Coronaviruses are positive-sense, single-stranded RNA ((+)ssRNA) enveloped viruses that encode for a total of four structural proteins, spike protein (S), envelope protein (E), membrane protein (M) and nucleocapsid protein (N).
- the spike protein (S protein) is responsible for receptor-recognition, attachment to the cell, infection via the endosomal pathway, and the genomic release driven by fusion of viral and endosomal membranes. Though sequences between the different family members vary, there are conserved regions and motifs within the S protein making it possible to divide the S protein into two subdomains: S1 and S2. While the S2, with its transmembrane domain, is responsible for membrane fusion, the S1 domain recognizes the virus-specific receptor and binds to the target host cell. Within several coronavirus isolates, the receptor binding domain (RBD) was identified.
- the present invention provides binding agents that are at least bispecific for the binding to coronavirus spike protein (S protein), i.e., they are capable of binding to at least two different epitopes of the coronavirus S protein. Additionally, the present invention provides antibodies such as monospecific, bivalent antibodies that bind to coronavirus S protein.
- the binding agents, including antibodies, described herein may block the interaction of coronavirus S protein with its target receptor, ACE2.
- the binding agents and nucleic acids encoding these binding agents may be used in the treatment or prevention of coronavirus infection in a subject.
- RNA encoding a binding agent disclosed herein may be administered to provide (following expression of the RNA by appropriate target cells) binding agent for targeting coronavirus S protein, in particular SARS-CoV-2 S protein.
- the pharmaceutical composition described herein may comprise as the active principle single-stranded RNA that may be translated into the respective protein upon entering cells of a recipient.
- the RNA may contain one or more structural elements optimized for maximal efficacy of the RNA with respect to stability and translational efficiency (5' cap, 5' UTR, 3' UTR, poly(A)-tail). In one embodiment, the RNA contains all of these elements.
- RNA described herein may be complexed with proteins and/or lipids, preferably lipids, to generate RNA-particles for administration. If a combination of different RNAs is used, the RNAs may be complexed together or complexed separately with proteins and/or lipids to generate RNA-particles for administration.
- the present invention provides a binding agent comprising at least a first binding domain binding to a coronavirus spike protein (S protein) and a second binding domain binding to the coronavirus S protein, wherein the first and second binding domains bind to different epitopes of the coronavirus S protein.
- the binding agent is a multispecific such as a bispecific binding agent.
- the first binding domain comprises a heavy chain variable region (VH).
- VH comprises a HCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 4, 12, 20, 28, 36, 44, 52, 60, 68, 76, 84, 92, 100, 108, 116, and 124.
- the VH comprises a HCDR2 comprising a sequence selected from the group consisting of SEQ ID NO: 3, 11, 19, 27, 35, 43, 51, 59, 67, 75, 83, 91, 99, 107, 115, and 123.
- the VH comprises a HCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 2, 10, 18, 26, 34, 42, 50, 58, 66, 74, 82, 90, 98, 106, 114, and 122. In one embodiment, the VH is selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 58, a HCDR2 comprising the sequence of SEQ ID NO: 59, and a HCDR3 comprising the sequence of SEQ ID NO: 60;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 74, a HCDR2 comprising the sequence of SEQ ID NO: 75, and a HCDR3 comprising the sequence of SEQ ID NO: 76;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprising the sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124.
- the first binding domain comprises a light chain variable region (VL).
- the VL comprises a LCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 8, 16, 24, 32, 40, 48, 56, 64, 72, 80, 88, 96, 104, 112, 120, and 128.
- the VL comprises a LCDR2 comprising a sequence selected from the group consisting of SEQ ID NO: 7, 15, 23, 31, 39, 47, 55, 63, 71, 79, 87, 95, 103, 111, 119, and 127.
- the VL comprises a LCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 6, 14, 22, 30, 38, 46, 54, 62, 70, 78, 86, 94, 102, 110, 118, and 126. In one embodiment, the VL is selected from the group consisting of:
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 62, a LCDR2 comprising the sequence of SEQ ID NO: 63, and a LCDR3 comprising the sequence of SEQ ID NO: 64;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- (x) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 78, a LCDR2 comprising the sequence of SEQ ID NO: 79, and a LCDR3 comprising the sequence of SEQ ID NO: 80;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEO ID NO: 104;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- (xv) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120; and
- a VL comprising a LCDR1 comprisingthe sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128.
- the first binding domain comprises a VH and a VL selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 58, a HCDR2 comprising the sequence of SEQ ID NO: 59, and a HCDR3 comprising the sequence of SEQ ID NO: 60 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 62, a LCDR2 comprising the sequence of SEQ ID NO: 63, and a LCDR3 comprising the sequence of SEQ ID NO: 64;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEQ ID NO: 104;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120; and
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128.
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 1, 9, 17, 25, 33, 41, 49, 57, 65, 73, 81, 89, 97, 105, 113, and 121.
- the first binding domain comprises a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 5, 13, 21, 29, 37, 45, 53, 61, 69, 77, 85, 93, 101, 109, 117, and 125.
- the first binding domain comprises a VH and a VL selected from the group consisting of:
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 1
- VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 5;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 9 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 13;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 25 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 29;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 33 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 37;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 45;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 57 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 61; (ix) a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 65 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO:
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 73 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 77;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 85;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 89 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 93;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 97 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 101;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 113 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 117;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125.
- the first binding domain comprises a VH and a VL of an antibody which competes for coronavirus S protein binding with and/or has the specificity for coronavirus S protein of an antibody comprising a VH or a VL, or a combination thereof as set forth above.
- the second binding domain comprises an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof.
- ECD extracellular domain
- the variant of the ECD of ACE2 protein or the fragment of the ECD of ACE2 protein or the variant thereof binds to the coronavirus S protein.
- the second binding domain comprises a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 129.
- the second binding domain comprises a heavy chain variable region (VH).
- the VH of the second binding domain comprises a HCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 4, 12, 20, 28, 36, 44, 52, 60, 68, 76, 84, 92, 100, 108, 116, and 124.
- the VH of the second binding domain comprises a HCDR2 comprising a sequence selected from the group consisting of SEQ. ID NO: 3, 11, 19, 27, 35, 43, 51, 59, 67, 75, 83, 91, 99, 107, 115, and 123.
- the VH of the second binding domain comprises a HCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 2, 10, 18, 26, 34, 42, 50, 58, 66, 74, 82, 90, 98, 106, 114, and 122. In one embodiment, the VH of the second binding domain is selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52;
- a VH comprising a HCDR1 comprisingthe sequence of SEQ ID NO: 58, a HCDR2 comprising the sequence of SEQ ID NO: 59, and a HCDR3 comprising the sequence of SEQ ID NO: 60;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ. ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 74, a HCDR2 comprising the sequence of SEQ ID NO: 75, and a HCDR3 comprising the sequence of SEQ ID NO: 76;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprising the sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124.
- the second binding domain comprises a light chain variable region (VL).
- the VL of the second binding domain comprises a LCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 8, 16, 24, 32, 40, 48, 56, 64, 72, 80, 88, 96, 104, 112, 120, and 128.
- the VL of the second binding domain comprises a LCDR2 comprising a sequence selected from the group consisting of SEQ ID NO: 7, 15, 23, 31, 39, 47, 55, 63, 71, 79, 87, 95, 103, 111, 119, and 127.
- the VL of the second binding domain comprises a LCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 6, 14, 22, 30, 38, 46, 54, 62, 70, 78, 86, 94, 102, 110, 118, and 126. In one embodiment, the VL of the second binding domain is selected from the group consisting of:
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 62, a LCDR2 comprising the sequence of SEQ ID NO: 63, and a LCDR3 comprising the sequence of SEQ ID NO: 64;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- (x) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 78, a LCDR2 comprising the sequence of SEQ ID NO: 79, and a LCDR3 comprising the sequence of SEQ ID NO: 80;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEQ ID NO: 104;
- a VL comprising a LCDR1 comprisingthe sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- (xv) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120; and
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128.
- the second binding domain comprises a VH and a VL selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 58, a HCDR2 comprising the sequence of SEQ ID NO: 59, and a HCDR3 comprising the sequence of SEQ ID NO: 60 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 62, a LCDR2 comprising the sequence of SEQ ID NO: 63, and a LCDR3 comprising the sequence of SEQ ID NO: 64;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VH comprising a HCDR1 comprisingthe sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEQ ID NO: 104;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- a VH comprising a HCDR1 comprisin the sequence of SEQID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120; and
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128.
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 1, 9, 17, 25, 33, 41, 49, 57, 65, 73, 81, 89, 97, 105, 113, and 121.
- the second binding domain comprises a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 5, 13, 21, 29, 37, 45, 53, 61, 69, 77, 85, 93, 101, 109, 117, and 125.
- the second binding domain comprises a VH and a VL selected from the group consisting of:
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 1
- VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 5;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 9 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 13;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 25 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 29;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 33 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 37;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 45;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 57 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 61; (ix) a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 65 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO:
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 73 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 77;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 85;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 89 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 93;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 97 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 101;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 113 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 117;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125.
- the second binding domain comprises a VH and a VL of an antibody which competes for coronavirus S protein binding with and/or has the specificity for coronavirus S protein of an antibody comprising a VH or a VL, or a combination thereof as set forth above.
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ. ID NO
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 122, a HCDR2 comprisingthe sequence ofSEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprisingthe sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprisingthe sequence of SEQID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 122, a HCDR2 comprisingthe sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprisingthe sequence of SEQID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprisingthe sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence ofSEQID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprisingthe sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprisingthe sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprisingthe sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprisingthe sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprisingthe sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprisingthe sequence of SEQ ID NO: 111, and a LCDR3 comprising the
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprisingthe sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprisingthe sequence ofSEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprisingthe sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprisingthe sequence ofSEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 18, a HCDR2 comprisingthe sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ. ID NO: 24;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 42, a HCDR2 comprisingthe sequence of SEQID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprisingthe sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 42, a HCDR2 comprisingthe sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprisingthe sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 122, a HCDR2 comprising the sequence of SEQ ID NO: 123, and a HCDR3 comprising the sequence of SEQ ID NO: 124 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 126, a LCDR2 comprising the sequence of SEQ ID NO: 127, and a LCDR3 comprising the sequence of SEQ ID NO: 128, and the second binding domain comprises a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 129;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprisingthe sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24, and the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprisingthe sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQID NO: 82, a HCDR2 comprisingthe sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprisingthe sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- the first binding domain comprises a VH comprising a HCDR1 comprising the sequence ofSEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56
- the second binding domain comprises a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprisingthe sequence of SEQID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO:
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 33 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 1 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 9 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 25 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises, a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 33 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 37
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 25 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 29, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 45
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 1 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 5, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 9 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 13, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 45
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 121 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 125, and the second binding domain comprises a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 129;
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21, and the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 85
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 85
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the first binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53
- the second binding domain comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of S
- the binding agent described herein comprises a heavy chain and a light chain forming the first binding domain.
- the binding agent described herein comprises two heavy chains and two light chains, wherein each of the heavy chains together with one of the light chains forms a first binding domain.
- the heavy chain comprises a VH.
- the light chain comprises a VL.
- the heavy chain comprises a fragment crystallizable (Fc) region.
- a heavy chain is associated with a light chain.
- the heavy chains are covalently and/or non-covalently associated.
- the two heavy chains are identical and the two light chains are identical.
- the binding agent comprises a full-length antibody or a full-length antibody-like molecule comprising first binding domains.
- the binding agent comprises two first binding domains. In one embodiment, the two first binding domains bind to the same epitope.
- the second binding domain comprises a single-chain variable fragment (scFv).
- scFv single-chain variable fragment
- the first and second binding domains are covalently linked, either directly or through a linker.
- the linker comprises a glycine-serine (GS) linker.
- the glycine-serine linker comprises a (G 4 S) 1 linker.
- the glycine-serine linker comprises a (G 4 S) 2 linker.
- the glycine-serine linker comprises a (G 4 S) 3 linker.
- the glycine-serine linker comprises a (648)4 linker.
- the glycine-serine linker comprises a (648)5 linker.
- the binding agent comprises two heavy chains and two light chains forming a full-length antibody or a full-length antibody-like molecule comprising two first binding domains, wherein each of the light chains is linked to a second binding domain.
- the C-terminus of each of the light chains is linked to the N-terminus of a second binding domain.
- the N-terminus of each of the light chains is linked to the C-terminus of a second binding domain.
- the binding agent comprises:
- a second polypeptide comprising a light chain (LC) and further comprising an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof.
- LC light chain
- ECD extracellular domain
- the binding agent comprises:
- a second polypeptide comprising a light chain (LC) and further comprising a scFv.
- the binding agent comprises an antibody comprising a first binding arm and a second binding arm, wherein a. the first binding arm comprises:
- a second polypeptide comprising a light chain (LC) and further comprising an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof, and; b. the second binding arm comprises:
- the binding agent comprises an antibody comprising a first binding arm and a second binding arm, wherein a. the first binding arm comprises:
- a second polypeptide comprising a light chain (LC) and further comprising a scFv, and; b.
- the second binding arm comprises:
- a second polypeptide comprising a light chain (LC) and further comprising a scFv.
- first polypeptide of the first binding arm and the first polypeptide of the second binding arm are identical.
- second polypeptide of the first binding arm and the second polypeptide of the second binding arm are identical.
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 133 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 134 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 135 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 136 or a fragment thereof
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 137 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 9 least 97%, at least
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 139 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 140 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 143 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 144 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 145 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 146 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 147 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 148 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 149 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 150 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 153 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 154 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 155 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 156 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 157 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 158 or a fragment thereof
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 159 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 9 least 97%, at least
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 161 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 162 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 163 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 164 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 165 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 166 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 167 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 168 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 169 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 170 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 171 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 172 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 173 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 174 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 175 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 176 or a fragment thereof
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 177 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%,
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 179 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 180 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 181 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 182 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 183 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 184 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 185 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 186 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 187 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 188 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 189 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 190 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 191 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 192 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 193 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 194 or a fragment thereof
- the first polypeptide comprises an amino acid sequence having at least 70% z at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 195 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 205 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 206 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 207 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 208 or a fragment thereof;
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 209 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 210 or a fragment thereof; or
- the first polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 211 or a fragment thereof
- the second polypeptide comprises an amino acid sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 212 or a fragment thereof.
- the heavy chain (HC) comprises a heavy chain variable region (VH) and a heavy chain constant region (CH).
- the heavy chain constant region (CH) comprises a constant region domain 1 region (CH1), a hinge region, a constant region domain 2 region (CH2), and a constant region domain 3 region (CH3).
- the light chain (LC) comprises a light chain variable region (VL) and a light chain constant region (CL).
- a heavy chain variable region (VH) and a light chain variable region (VL) together provide a first binding domain.
- a heavy chain variable region (VH) and a light chain variable region (VL) on the same binding arm together provide a first binding domain.
- an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof provides a second binding domain.
- a scFv provides a second binding domain.
- the present invention provides an antibody, comprising a heavy chain variable region (VH), wherein the VH comprises one or more selected from the group consisting of:
- a HCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 4, 12, 20, 28, 36, 44, 52, 60, 68, 76, 84, 92, 100, 108, and 116;
- a HCDR2 comprising a sequence selected from the group consisting of SEQ ID NO: 3, 11, 19, 27, 35, 43, 51, 59, 67, 75, 83, 91, 99, 107, and 115;
- a HCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 2, 10, 18, 26, 34, 42, 50, 58, 66, 74, 82, 90, 98, 106, and 114.
- the VH is selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36;
- VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 50, a HCDR2 comprising the sequence of SEQ ID NO: 51, and a HCDR3 comprising the sequence of SEQ ID NO: 52;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 58, a HCDR2 comprising the sequence of SEQ ID NO: 59, and a HCDR3 comprising the sequence of SEQ ID NO: 60;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 74, a HCDR2 comprising the sequence of SEQ ID NO: 75, and a HCDR3 comprising the sequence of SEQ ID NO: 76;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprising the sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116.
- the present invention provides an antibody, comprising a light chain variable region (VL), wherein the VL comprises one or more selected from the group consisting of:
- a LCDR3 comprising a sequence selected from the group consisting of SEQ ID NO: 8, 16, 24, 32, 40, 48, 56, 64, 72, 80, 88, 96, 104, 112, and 120;
- a LCDR2 comprising a sequence selected from the group consisting of SEQ ID NO: 7, 15, 23, 31, 39, 47, 55, 63, 71, 79, 87, 95, 103, 111, and 119;
- a LCDR1 comprising a sequence selected from the group consisting of SEQ ID NO: 6, 14, 22, 30, 38, 46, 54, 62, 70, 78, 86, 94, 102, 110, and 118.
- the VL is selected from the group consisting of:
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 54, a LCDR2 comprising the sequence of SEQ ID NO: 55, and a LCDR3 comprising the sequence of SEQ ID NO: 56;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 62, a LCDR2 comprising the sequence of SEQ ID NO: 63, and a LCDR3 comprising the sequence of SEQ ID NO: 64;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- (x) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 78, a LCDR2 comprising the sequence of SEQ ID NO: 79, and a LCDR3 comprising the sequence of SEQ ID NO: 80;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEQ ID NO: 104;
- a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112;
- (xv) a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120.
- the antibody comprises a VH and a VL selected from the group consisting of:
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 2, a HCDR2 comprising the sequence of SEQ ID NO: 3, and a HCDR3 comprising the sequence of SEQ ID NO: 4 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 6, a LCDR2 comprising the sequence of SEQ ID NO: 7, and a LCDR3 comprising the sequence of SEQ ID NO: 8;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 10, a HCDR2 comprising the sequence of SEQ ID NO: 11, and a HCDR3 comprising the sequence of SEQ ID NO: 12 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 14, a LCDR2 comprising the sequence of SEQ ID NO: 15, and a LCDR3 comprising the sequence of SEQ ID NO: 16;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 18, a HCDR2 comprising the sequence of SEQ ID NO: 19, and a HCDR3 comprising the sequence of SEQ ID NO: 20 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 22, a LCDR2 comprising the sequence of SEQ ID NO: 23, and a LCDR3 comprising the sequence of SEQ ID NO: 24;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 26, a HCDR2 comprising the sequence of SEQ ID NO: 27, and a HCDR3 comprising the sequence of SEQ ID NO: 28 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 30, a LCDR2 comprising the sequence of SEQ ID NO: 31, and a LCDR3 comprising the sequence of SEQ ID NO: 32;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 34, a HCDR2 comprising the sequence of SEQ ID NO: 35, and a HCDR3 comprising the sequence of SEQ ID NO: 36 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 38, a LCDR2 comprising the sequence of SEQ ID NO: 39, and a LCDR3 comprising the sequence of SEQ ID NO: 40;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 42, a HCDR2 comprising the sequence of SEQ ID NO: 43, and a HCDR3 comprising the sequence of SEQ ID NO: 44 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 46, a LCDR2 comprising the sequence of SEQ ID NO: 47, and a LCDR3 comprising the sequence of SEQ ID NO: 48;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 66, a HCDR2 comprising the sequence of SEQ ID NO: 67, and a HCDR3 comprising the sequence of SEQ ID NO: 68 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 70, a LCDR2 comprising the sequence of SEQ ID NO: 71, and a LCDR3 comprising the sequence of SEQ ID NO: 72;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 74, a HCDR2 comprising the sequence of SEQ ID NO: 75, and a HCDR3 comprising the sequence of SEQ ID NO: 76 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 78, a LCDR2 comprising the sequence of SEQ ID NO: 79, and a LCDR3 comprising the sequence of SEQ ID NO: 80;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 82, a HCDR2 comprising the sequence of SEQ ID NO: 83, and a HCDR3 comprising the sequence of SEQ ID NO: 84 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 86, a LCDR2 comprising the sequence of SEQ ID NO: 87, and a LCDR3 comprising the sequence of SEQ ID NO: 88;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 90, a HCDR2 comprising the sequence of SEQ ID NO: 91, and a HCDR3 comprising the sequence of SEQ ID NO: 92 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 94, a LCDR2 comprising the sequence of SEQ ID NO: 95, and a LCDR3 comprising the sequence of SEQ ID NO: 96;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 98, a HCDR2 comprising the sequence of SEQ ID NO: 99, and a HCDR3 comprising the sequence of SEQ ID NO: 100 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 102, a LCDR2 comprising the sequence of SEQ ID NO: 103, and a LCDR3 comprising the sequence of SEQ ID NO: 104;
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 106, a HCDR2 comprising the sequence of SEQ ID NO: 107, and a HCDR3 comprising the sequence of SEQ ID NO: 108 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 110, a LCDR2 comprising the sequence of SEQ ID NO: 111, and a LCDR3 comprising the sequence of SEQ ID NO: 112; and
- a VH comprising a HCDR1 comprising the sequence of SEQ ID NO: 114, a HCDR2 comprising the sequence of SEQ ID NO: 115, and a HCDR3 comprising the sequence of SEQ ID NO: 116 and a VL comprising a LCDR1 comprising the sequence of SEQ ID NO: 118, a LCDR2 comprising the sequence of SEQ ID NO: 119, and a LCDR3 comprising the sequence of SEQ ID NO: 120.
- the antibody comprises a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 1, 9, 17, 25, 33, 41, 49, 57, 65, 73, 81, 89, 97, 105, and 113.
- the antibody comprises a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to a sequence selected from the group consisting of SEQ ID NO: 5, 13, 21, 29, 37, 45, 53, 61, 69, 77, 85, 93, 101, 109, and 117.
- the antibody comprises a VH and a VL selected from the group consisting of:
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 1
- VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 5;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 9 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 13;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 17 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 21;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 25 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 29;
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 33 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 37;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 41 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 45;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 49 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 53; (viii) a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 57 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO:
- VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 65 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 69;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 73 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 77;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 81 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 85;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 89 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 93;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 97 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 101;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 105 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 109;
- a VH comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 113 and a VL comprising a sequence having at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 97%, at least 99%, or 100% identity to the sequence of SEQ ID NO: 117.
- the antibody comprises:
- the antibody comprises a first binding arm and a second binding arm, wherein a. the first binding arm comprises:
- a second polypeptide comprising a light chain (ii) a second polypeptide comprising a light chain (LC).
- first polypeptide of the first binding arm and the first polypeptide of the second binding arm are identical.
- second polypeptide of the first binding arm and the second polypeptide of the second binding arm are identical.
- the heavy chain (HC) comprises a heavy chain variable region (VH) and a heavy chain constant region (CH).
- the heavy chain constant region (CH) comprises a constant region domain 1 region (CH1), a hinge region, a constant region domain 2 region (CH2), and a constant region domain 3 region (CH3).
- the light chain (LC) comprises a light chain variable region (VL) and a light chain constant region (CL).
- a heavy chain variable region (VH) and a light chain variable region (VL) together provide a first binding domain.
- a heavy chain variable region (VH) and a light chain variable region (VL) on the same binding arm together provide a first binding domain.
- an antibody described herein which may be part of a binding molecule described herein may be modified to induce Fc-mediated effector function to a lesser extent compared to a parental antibody.
- the heavy chain constant regions are modified so that the antibody induces Fc-mediated effector function to a lesser extent compared to an antibody which is identical except for comprising non-modified heavy chains.
- the Fc-mediated effector function is measured by binding to IgG Fc (Fey) receptors, binding to Clq, or induction of Fc-mediated cross-linking of FcRs. In one embodiment, said Fc-mediated effector function is measured by binding to Clq.
- the heavy chain constant regions have been modified so that binding of Clq to said antibody is reduced compared to a parental antibody, preferably reduced by at least 70%, at least 80%, at least 90%, at least 95%, at least 97%, or 100%, wherein Clq binding is preferably determined by ELISA.
- one or more amino acids in the positions corresponding to positions L234 and L235 in a human IgG1 heavy chain according to EU numbering are not L and L, respectively.
- the positions corresponding to positions L234 and L235 in a human IgG1 heavy chain according to EU numbering are A and A, respectively, in said first and second heavy chain constant regions.
- the present invention provides a recombinant nucleic acid which encodes a binding agent described herein or an antibody described herein.
- the recombinant nucleic acid is RNA.
- the present invention provides a cell transfected with a recombinant nucleic acid described herein.
- the cell expresses the binding agent or the antibody.
- the present invention provides a pharmaceutical composition
- a pharmaceutical composition comprising a binding agent described herein, an antibody described herein, or a recombinant nucleic acid described herein.
- the present invention provides the binding agent described herein, the antibody described herein, or the recombinant nucleic acid described herein for therapeutic use.
- the therapeutic use comprises a therapeutic or prophylactic treatment of a coronavirus infection in a subject.
- the therapeutic use comprises neutralizing coronavirus in a subject.
- the subject is human.
- the coronavirus is a betacoronavirus. In one embodiment of the binding agent described herein, the antibody described herein, the recombinant nucleic acid described herein, the cell described herein, or the pharmaceutical composition described herein, the coronavirus is a sarbecovirus.
- the coronavirus is SARS-CoV-1 and/or SARS-CoV-2.
- the present invention provides a method of treating or preventing a coronavirus infection comprising administering to a subject the binding agent described herein, the antibody described herein, the recombinant nucleic acid described herein, or the pharmaceutical composition described herein.
- a coronavirus infection comprising administering to a subject the binding agent described herein, the antibody described herein, the recombinant nucleic acid described herein, or the pharmaceutical composition described herein.
- Embodiments of the coronavirus are as described herein.
- the invention relates to an agent or composition described herein for use in a method described herein.
- IgG-scFv bispecific binding agents can be expressed in vivo by administering RNA and that IgG-scFv bispecific binding agents were correctly assembled and folded.
- the invention also relates to the following exemplary embodiments:
- composition or medical preparation comprising:
- RNA encoding a second polypeptide chain comprising an immunoglobulin light chain and a single chain Fv (scFv).
- scFv single chain Fv
- VH variable region of a heavy chain
- VL variable region of a light chain
- variable region of a heavy chain (VH) of the immunoglobulin heavy chain interacts with the variable region of a light chain (VL) of the immunoglobulin light chain to form a first binding domain.
- composition or medical preparation of any one of embodiments 1 to 7 wherein the scFv comprises a variable region of a heavy chain (VH) of an immunoglobulin and a variable region of a light chain (VL) of an immunoglobulin.
- VH heavy chain
- VL variable region of a light chain
- composition or medical preparation of embodiment 9 wherein the first binding domain and the second binding domain bind to different epitopes, wherein the different epitopes are present on the same or on different antigens.
- composition or medical preparation of any one of embodiments 1 to 10 wherein two of the first polypeptide chains and two of the second polypeptide chains form a full-length antibody, wherein an scFv is linked to each of the light chains.
- CH1 heavy chain
- CL light chain
- CH2 a heavy chain
- CH3 a heavy chain
- VH-CH1 wherein the CH may optionally be modified.
- composition or medical preparation of embodiment 26, wherein the peptide linker comprises the amino acid sequence (G 4 S) 4 or a functional variant thereof.
- composition or medical preparation of embodiment 29, wherein the modified nucleoside is selected from pseudouridine ( ⁇ ), N1-methyl-pseudouridine (m1 ⁇ ), and 5- methyl-uridine (m5U).
- composition or medical preparation of embodiment 31, wherein the cap comprises m 2 7 ' 3'-O G ppp( m 1 2'-O ) Ap G .
- 33. The composition or medical preparation of any one of embodiments 1 to 32, wherein the first RNA and/or the second RNA comprises a 5' UTR.
- composition or medical preparation of embodiment 33, wherein the 5' UTR comprises the nucleotide sequence of SEQ ID NO: 199, or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 199.
- composition or medical preparation of embodiment 35, wherein the 3' UTR comprises the nucleotide sequence of SEQ ID NO: 201, or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 201.
- composition or medical preparation of embodiment 37, wherein the poly-A sequence comprises at least 100 nucleotides.
- composition or medical preparation of embodiment 37 or 38, wherein the poly-A sequence comprises the nucleotide sequence of SEQ ID NO: 202.
- RNA is formulated or is to be formulated as particles.
- composition or medical preparation of embodiment 50, wherein the particles are lipid nanoparticles (LNP).
- a neutral lipid e.g., a phospholipid
- a polymer-conjugated lipid e.g., a pegylated lipid
- a steroid e.g., cholesterol
- composition or medical preparation of any one of embodiments 1 to 45 which is a pharmaceutical composition.
- composition or medical preparation of embodiment 46, wherein the pharmaceutical composition further comprises one or more pharmaceutically acceptable carriers, diluents and/or excipients.
- composition or medical preparation of any one of embodiments 1 to 49 for pharmaceutical use is provided.
- composition or medical preparation of embodiment 50, wherein the pharmaceutical use comprises a therapeutic or prophylactic treatment of a disease or disorder.
- a method for expressing a binding agent in a subject comprising administering a first RNA and a second RNA as set forth in any one of embodiments 1 to 54 to the subject.
- a method for expressing a binding agent in a subject comprising administering the composition or medical preparation of any one of embodiments 1 to 54 to the subject.
- Figure 1 Overview of anti-S1-antibody fusion constructs with human ACE-2 extracellular domain
- the ECD of ACE-2 (aa 18-615) containing mutations R273Q, H345L, H374N, H378N is either fused N- or C-terminally to the light chain of the anti-S1 antibody and the anti-S1 heavy chain either contains the LS (M428L/N434S) mutation or not (A).
- the modified ACE-2 ACD is fused to an Fc (CH2-CH3) domain either containing the LS (M428L/N434S) mutation or not (B).
- binding of anti-S1-antibody-ACE2 fusion proteins to immobilized SARS-CoV2-S1-RBD protein was tested in an ELISA.
- the anti-S1-antibody (408/413), the anti-S1-antibody-ACE2 fusion proteins and ACE-2-hFc (402/403) as a control were tested in a serial dilution covering a concentration range from 20,000 to 0.013 ng/ml.
- EC50 values are shown as determined after curve fitting using XLfit.
- the anti-S1-antibody (413), ACE-2-hFc (402) and the anti-S1-antibody-ACE2 fusion proteins were tested in a pseudovirus neutralization test (pVNT).
- the graph shows the number of infected cells as measured by the expression of GFP (Y-axis). Concentrations of test samples ranged from 100 to 0.046 pg/ml. IC50 values are displayed as determined after curve fitting using GraphPad Prism.
- Figure 5 Affinities of anti-S1-antibody-ACE2 fusion proteins to active trimer SARS-CoV-2 S and SARS-CoV-2 S1-RBD protein
- Binding of anti-SARS-CoV2-S1 antibodies in B-cell supernatants to immobilized SARS-CoV2-S1 protein was tested in an ELISA.
- A Shown are the rabbit antibody concentrations for each B- cell supernatant measured by a quantification ELISA.
- B-cell supernatants and ACE-2-mFc as a control were tested in a serial dilution of 1:3 and concentrations are plotted according to the determined rlgG content (see example 6A).
- C Table 1: EC50 data of anti-S1 rabbit antibodies from B-cell supernatants in SARS-CoV-2 S1 Binding ELISA with a coating concentration of 3pg/ml.
- Table 2 EC50 data of anti-S1 rabbit antibodies from B-cell supernatants in SARS-CoV-2 S1 Binding ELISA with a coating concentration of 0.85pg/ml. EC50 values are shown as determined after curve fitting using XLfit.
- FIG. 8 SARS-CoV2-S, SARS-CoV2-S1-RBD and SARS-CoV-S1-RBD ELISA with purified antibodies of the invention
- FIG. 10 Pseudovirus neutralization activity by purified antibodies of the invention
- the purified, chimeric antibodies of the invention were tested in a pseudovirus neutralization test (pVNT).
- pVNT pseudovirus neutralization test
- the chimeric antibodies as well as anti-S1-antibody (413), ACE2-hFc (403) and the anti-S1-antibody-ACE2 fusion protein (411) were tested in serial dilution in concentrations from 100 to 0.049 pg/ml or 30 to 0.01 pg/ml.
- the graph shows the number of infected cells per well as measured by the expression of GFP (Y-axis).
- the IC50 and IC90 values for selected antibodies of the invention are summarized in (B).
- Figure 12 Overview of bispecific anti-S1 antibodies scFvs derived from either the anti-S1 antibody or antibodies of the invention (New-scFv) are coupled to the light chain of either the anti-S1 antibody or the antibodies of the invention, respectively. Alternatively, New-scFvs are coupled to the light chain of another antibody of the invention.
- Figure 13 Modular schemes illustrating the RNA-constructs and the encoded anti-S1- antibody-ACE2 fusion RiboMabs.
- A Design of the heavy chain (HC, top) and light chain ACE2 extra cellular domain (ECD) fusion (LC-ACE2, bottom) on IVT-mRNA level.
- B Illustration of the translated anti-S1-antibody-ACE2- RiboMabs, left, RiboMab_411, right, RiboMab_406. Curved lines symbolize the glycine-serine [(Gly4Ser)4] linker.
- ACE2 angiotensin-converting enzyme 2
- a-S1 anti-spike protein 1
- CL constant light chain region
- CH constant heavy chain region
- ECD extracellular domain
- Fc fragment crystallizable region
- GS (Gly4Ser)4 linker
- HC heavy chain
- LC light chain
- LS methionine 428 leucine and asparagine 434 serine substitution
- Poly(A) poly(A) tail
- Sec secretion signal
- UTR untranslated region
- VH variable heavy chain domain
- VL variable light chain domain.
- Figure 14 Expression of anti-S1-antibody-ACE2 fusion RiboMabs in vitro.
- Human embryonic kidney cell line HEK 293T/17 was transiently transfected via electroporation with the indicated IVT-mRNA mass-related ratios of the heavy chain (HC) and the light chain ACE2 ECD fusion (LC-ACE2) for RiboMab_411 or RiboMab_406 or with RNA buffer only (Mock).
- HEK 293T/17 cell culture supernatants (SN) containing secreted RiboMab were harvested 48 hours post electroporation and subjected to (A) Gyros immunoassay quantitation and (B, C) Western Blot analyses.
- RiboMab concentration in SN after transfection of HC:LC-ACE2 ratios as indicated (x-axis) was analyzed with a fluorescently- labeled anti-human IgG detection antibody via Gyros sandwich immunoassay.
- B, C Western Blot analysis was performed for the detection of translated RiboMabs. 22.5 ng of purified reference protein ID 411 (Ref. protein), 7.5 ⁇ L Mock or 7.5 ⁇ L RiboMab-containing SN was loaded and separated by polyacrylamide gradient gel electrophoresis (4-15% polyacrylamide) under (B) non-reducing and (C) reducing conditions. Two different molecular weight standards (MW std. 1 and 2) were applied. Proteins were detected with a mixture of two polyclonal horseradish peroxidase-conjugated goat anti-human IgG, Fcy-fragment specific (1:2,000) and kappa LC-specific (1:200) antibodies.
- Fc fragment crystallizable region of IgG; HC, heavy chain; IB, immunoblot; IgG; immunoglobulin G; LC, light chain; MW std., molecular weight standard; SN, supernatant.
- Figure 15 Estimation of in vivo pharmacokinetics of anti-S1-antibody-ACE2 fusion RiboMabs.
- Figure 16 Western Blot analysis of in vivo expressed anti-S1-antibody-ACE2 fusion RiboMabs.
- Serum was sampled from female Balb/cJRj mice injected with 30 ⁇ g RNA-LNP encoding RiboMab_406 or RiboMab_411 six hours post administration and subjected to Western Blot analysis.
- Purified reference protein ID 411 diluted in buffer (Ref. protein) or serum of untreated mice (Ref. protein in serum) served as positive control.
- Serum of mice injected with luciferase-encoding RNA-LNP was used as negative control.
- 10 ng reference protein or 5 pL of serum sample was separated by polyacrylamide gradient gel electrophoresis (4-15%) under (A) non-reducing and (B) reducing conditions. Two different molecular weight standards (MW std. 1 and 2) were applied. Proteins were detected with a mixture of two polyclonal horseradish peroxidase-conjugated goat anti-human IgG, Fcy-fragment specific (1:2,000) and kappa LC-specific (1:200
- Fc fragment crystallizable region of IgG; h, human; HC, heavy chain; IB, immunoblot; IgG; immunoglobulin G; LC, light chain; MW std., molecular weight standard; SN, supernatant.
- FIG 17 Pseudovirus neutralization activity by RiboMab_411 and 406.
- RiboMab_406 and RiboMab_411 in HEK 293T/17 cell culture SN were tested in a pseudovirus neutralization test.
- SN of cells transfected with the HC only were used as Mock control (Mock 1, HC of RiboMab_406, Mock 2, HC of RiboMab_411).
- the samples were tested in a serial dilution with final concentrations ranging from 30 to 0.23 pg/mL.
- the graph shows the number of infected cells per well as measured by the expression of GFP (Y-axis).
- the table below shows the IC50 values (pg/mL).
- Figure 18 Binding of bispecific anti-S1-antibody-scFv fusion proteins to recombinant SARS- CoV2 S1-RBD protein
- binding of anti-S1-antibody-scFv fusion proteins to immobilized SARS-CoV2-S1-RBD protein was tested in an ELISA.
- the anti-S1-antibody (408), the antibodies of the invention and the anti-S1-antibody-scFv fusion proteins were tested in a serial dilution covering a concentration range from 1,000 to 0.001 ng/ml.
- B EC50 values are shown as determined after curve fitting using XLfit.
- Figure 20 Affinities of S1 targeting antibodies of the invention to SARS-CoV-2 S1-RBD protein
- the purified bispecific antibody constructs 465 and 467 were tested in a pseudovirus neutralization test (pVNT).
- pVNT pseudovirus neutralization test
- A The graph shows the number of infected cells per well as measured by the expression of GFP (Y-axis).
- the IC50 and IC90 values for selected antibodies of the invention are summarized in (B).
- Figure 24 Affinity of S1 targeting antibody 470 of the invention to SARS-CoV-2 S1-RBD protein
- Figure 25 Modular schemes illustrating the RNA-constructs encoding IgG RiboMabs.
- CL constant light chain region
- CH constant heavy chain region
- Fc fragment crystallizable region
- HC heavy chain
- LC light chain
- LALA leucine-to-alanine (codon 234) and leucine-to- alanine (codon 235) substitutions
- LS methionine-to-leucine (codon 428) and asparagine-to- serine (codon 434) substitutions
- Poly(A) poly(A) tail
- Sec secretion signal
- UTR untranslated region
- VH variable heavy chain domain
- VL variable light chain domain.
- FIG. 26 Expression of anti-SARS-CoV-2 IgG RiboMabs in vitro.
- HEK 293T/17 Human embryonic kidney cell line HEK 293T/17 was transiently transfected via electroporation with IVT-mRNA mass-related ratios of the heavy chain (HC) and the light chain of 1.5:1 for the indicated RiboMabs.
- HEK 293T/17 cell culture supernatants (SN) containing secreted RiboMab were harvested 48 hours post electroporation and subjected to Gyros immunoassay quantitation. RiboMab concentration in SN after transfection of HC:LC ratios as indicated (x-axis) was analyzed with a fluorescently-labeled anti-human IgG detection antibody via Gyros sandwich immunoassay.
- Figure 27 Pseudovirus neutralization activity by in vitro expressed anti-SARS-CoV-2 IgG RiboMab candidates.
- HEK 293T/17 cell culture SN containing anti- SARS-CoV-2 RiboMabs as indicated on the x-axis of the respective graphs were tested in pseudovirus neutralization tests. The samples were tested in a serial dilution with final concentrations ranging from 30,000 to 7.3 ng/mL.
- A Graphs show the number of infected cells per well as measured by the expression of luciferase (Y-axis) in relative luminescence units (RLU). Error bars are standard errors of the mean (technical triplicates). Horizontal dotted lines indicate the benchmark (in RLU) for virus control.
- B Table showing the IC50 and IC90 values (ng/mL) of RiboMabs and the RiboMab IgG reference protein.
- IC50 half maximal inhibitory concentration
- IC90 concentration required to inhibit 90% of pseudovirus replication
- ID identification number
- IgG immunoglobulin gamma
- NC not calculable
- ref. reference
- RLU relative luminescence units.
- Figure 28 Estimation of in vivo pharmacokinetics of selected anti-SARS-CoV-2 IgG RiboMabs.
- RNA- LNP RNA- LNP encoding RiboMab_445, RiboMab_447, RiboMab_470, RiboMab_472, anti-SARS-CoV-2 RiboMab IgG reference or luciferase (negative control).
- An anti-S1 antibody (protein ID 408) reference was administered as protein reference at a dose of 100 ⁇ g. Blood samples from four mice per time point were drawn.
- RiboMab concentrations were measured via Gyros immunoassay in serum samples preprared 24, 96, 168, 216, 336 and 504 hours (Days 1 to 21 as indicated on the x-axis) after administration. No protein was detected in the negative control group (luciferase RNA-LNP, data not shown). The concentration is plotted in loglO scale on the y-axis. Error bars represent standard error of the mean (biological quadruplices). ID, identification number; IgG, immunoglobulin gamma.
- Figure 29 Pseudovirus neutralization activity by in vivo expressed anti-SARS-CoV-2 IgG RiboMab candidates.
- Balb/cJ Rj mouse serum samples containing anti- SARS-CoV-2 RiboMabs as indicated on the x- axis of the respective graphs were tested in pseudovirus neutralization tests using the wild- type SARS-CoV-2 spike protein.
- the samples were tested in 12-point, 2-fold (RiboMab_447) or 3-fold (RiboMab_445/470/472) serial dilutions.
- the starting concentration varied from sample to sample and was in the range of approximately 30 to 60 pg/mL.
- Graphs show the number of infected cells per well as measured by the expression of luciferase (Y-axis). Error bars represent the standard error of the mean (technical triplicates).
- B Table showing the IC50 and IC90 values (ng/mL) of RiboMabs and the protein reference (protein ID 408) in serum.
- IC50 half maximal inhibitory concentration
- IC90 concentration required to inhibit 90% of pseudovirus replication
- ID identification number
- ref. reference
- RLU relative luminescence units
- Figure 30 Modular schemes illustrating the RNA-constructs and the encoded bispecific IgG- scFv RiboMab.
- A Design of the heavy chain (HC, top) and light chain (LC-scFv, bottom) anti-SARS-CoV-2 encoding bispecific IgG-scFv RiboMabs on IVT-mRNA level.
- VH#1 and VL#1 use the coding sequences from the first anti-SARS-CoV-2 antibody, while VH#2 and VL#2 coding sequences derive from the second anti-SARS-CoV-2 specific antibody.
- B Illustration of the translated IgG-scFv RiboMab protein. Curved lines symbolize the glycine-serine (GS) linkers. The bold lines between VH#2 and VL#2 indicate the disulfide bridge stabilizing the scFv.
- CL constant light chain region
- CH constant heavy chain region
- ds disulfide bridge
- Fc fragment crystallizable region
- HC heavy chain
- GS glycine-serine linker
- LC light chain
- LALA leucine-to-alanine (codon 234) and leucine-to-alanine (codon 235) substitutions
- LS methionine-to-leucine (codon 428) and asparagine-to-serine (codon 434) substitutions
- Poly(A) poly(A) tail
- Sec secretion signal
- scFv single-chain variable fragment
- UTR untranslated region
- VH variable heavy chain domain
- VL variable light chain domain.
- Figure 31 Estimation of in vivo pharmacokinetics of selected anti-SARS-CoV-2 bispecific IgG- scFv RiboMabs.
- RNA- LNP encoding RiboMab_498, RiboMab_500, RiboMab_502 or luciferase (negative control).
- An anti-S1 antibody (protein ID 408) reference was administered as protein reference at a dose of 250 pg. Blood samples from four mice per time point were drawn. RiboMab concentrations were measured via Gyros immunoassay in serum samples prepared 6, 24, 48, 96, 168, 336 and 504 hours (Days 0.25 to 21 as indicated on the x-axis) after administration. No protein was detected in the negative control group (luciferase RNA-LNP, data not shown). The concentration is plotted in loglO scale on the y-axis. Error bars represent standard error of the mean (biological quadruplices).
- ID identification number
- IgG immunoglobulin gamma
- Figure 32 Pseudovirus neutralization activity by in vivo expressed anti-SARS-CoV-2 bispecific IgG-scFv RiboMab candidates.
- Serum was sampled from female Balb/cJ Rj mice 24 hours after administration with 30 pg RNA- LNP encoding RiboMab_498, RiboMab_500 or RiboMab_502.
- H heavy chain
- ID identification number
- IgG immunoglobulin gamma
- kD kilo dalton
- L light chain
- MW molecular weight
- scFv single chain variable fragment
- std. standard.
- Table 1 List of antibodies described herein based on SEQ ID NOs of heavy chain and light chain variable regions (HC VR, LC VR), and complementarity-determining regions (CDRs).
- the term “comprising” is used in the context of the present document to indicate that further members may optionally be present in addition to the members of the list introduced by “comprising”. It is, however, contemplated as a specific embodiment of the present disclosure that the term “comprising” encompasses the possibility of no further members being present, i.e., for the purpose of this embodiment "comprising” is to be understood as having the meaning of “consisting of” or “consisting essentially of”.
- Terms such as “increase”, “enhance” or “exceed” preferably relate to an increase or enhancement by at least 10%, at least 20%, at least 30%, at least 40%, at least 50%, at least 80%, at least 100%, at least 200%, at least 500%, or even more.
- peptide comprises oligo- and polypeptides and refers to substances which comprise about two or more, about 3 or more, about 4 or more, about 6 or more, about 8 or more, about 10 or more, about 13 or more, about 16 or more, about 20 or more, and up to about 50, about 100 or about 150, consecutive amino acids linked to one another via peptide bonds.
- protein or “polypeptide” refers to large peptides, in particular peptides having at least about 150 amino acids, but the terms "peptide", “protein” and “polypeptide” are used herein usually as synonyms.
- “Fragment” with reference to an amino acid sequence (peptide or protein), relates to a part of an amino acid sequence, i.e. a sequence which represents the amino acid sequence shortened at the N-terminus and/or C-terminus.
- a fragment shortened at the C-terminus is obtainable e.g. by translation of a truncated open reading frame that lacks the 3'-end of the open reading frame.
- a fragment shortened at the N-terminus (C- terminal fragment) is obtainable e.g. by translation of a truncated open reading frame that lacks the 5'-end of the open reading frame, as long as the truncated open reading frame comprises a start codon that serves to initiate translation.
- a fragment of an amino acid sequence comprises e.g. at least 50 %, at least 60 %, at least 70 %, at least 80%, at least 90% of the amino acid residues from an amino acid sequence.
- a fragment of an amino acid sequence preferably comprises at least 6, in particular at least 8, at least 12, at least 15, at least 20, at least 30, at least 50, or at least 100 consecutive amino acids from an amino acid sequence.
- variant herein is meant an amino acid sequence that differs from a parent amino acid sequence by virtue of at least one amino acid modification.
- the parent amino acid sequence may be a naturally occurring or wild type (WT) amino acid sequence, or may be a modified version of a wild type amino acid sequence.
- WT wild type
- the variant amino acid sequence has at least one amino acid modification compared to the parent amino acid sequence, e.g., from 1 to about 20 amino acid modifications, and preferably from 1 to about 10 or from 1 to about 5 amino acid modifications compared to the parent.
- wild type or “WT” or “native” herein is meant an amino acid sequence that is found in nature, including allelic variations.
- a wild type amino acid sequence, peptide or protein has an amino acid sequence that has not been intentionally modified.
- variants of an amino acid sequence comprise amino acid insertion variants, amino acid addition variants, amino acid deletion variants and/or amino acid substitution variants.
- variant includes all mutants, splice variants, posttranslationally modified variants, conformations, isoforms, allelic variants, species variants, and species homologs, in particular those which are naturally occurring.
- variant includes, in particular, fragments of an amino acid sequence.
- Amino acid insertion variants comprise insertions of single or two or more amino acids in a particular amino acid sequence. In the case of amino acid sequence variants having an insertion, one or more amino acid residues are inserted into a particular site in an amino acid sequence, although random insertion with appropriate screening of the resulting product is also possible.
- Amino acid addition variants comprise amino- and/or carboxy-terminal fusions of one or more amino acids, such as 1, 2, 3, 5, 10, 20, 30, 50, or more amino acids.
- Amino acid deletion variants are characterized by the removal of one or more amino acids from the sequence, such as by removal of 1, 2, 3, 5, 10, 20, 30, 50, or more amino acids. The deletions may be in any position of the protein.
- Amino acid deletion variants that comprise the deletion at the N-terminal and/or C-terminal end of the protein are also called N-terminal and/or C- terminal truncation variants.
- Amino acid substitution variants are characterized by at least one residue in the sequence being removed and another residue being inserted in its place. Preference is given to the modifications being in positions in the amino acid sequence which are not conserved between homologous proteins or peptides and/or to replacing amino acids with other ones having similar properties.
- amino acid changes in peptide and protein variants are conservative amino acid changes, i.e., substitutions of similarly charged or uncharged amino acids.
- a conservative amino acid change involves substitution of one of a family of amino acids which are related in their side chains.
- Naturally occurring amino acids are generally divided into four families: acidic (aspartate, glutamate), basic (lysine, arginine, histidine), non-polar (alanine, valine, leucine, isoleucine, proline, phenylalanine, methionine, tryptophan), and uncharged polar (glycine, asparagine, glutamine, cysteine, serine, threonine, tyrosine) amino acids. Phenylalanine, tryptophan, and tyrosine are sometimes classified jointly as aromatic amino acids.
- conservative amino acid substitutions include substitutions within the following groups: glycine, alanine; valine, isoleucine, leucine; aspartic acid, glutamic acid; asparagine, glutamine; serine, threonine; lysine, arginine; and phenylalanine, tyrosine.
- the degree of similarity, preferably identity between a given amino acid sequence and an amino acid sequence which is a variant of said given amino acid sequence will be at least about 60%, 70%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99%.
- the degree of similarity or identity is given preferably for an amino acid region which is at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90% or about 100% of the entire length of the reference amino acid sequence.
- the degree of similarity or identity is given preferably for at least about 20, at least about 40, at least about 60, at least about 80, at least about 100, at least about 120, at least about 140, at least about 160, at least about 180, or about 200 amino acids, in some embodiments continuous amino acids.
- the degree of similarity or identity is given for the entire length of the reference amino acid sequence.
- the alignment for determining sequence similarity, preferably sequence identity can be done with art known tools, preferably using the best sequence alignment, for example, using Align, using standard settings, preferably EMBOSS::needle, Matrix: Blosum62, Gap Open 10.0, Gap Extend 0.5.
- Sequence similarity indicates the percentage of amino acids that either are identical or that represent conservative amino acid substitutions.
- Sequence identity between two amino acid sequences indicates the percentage of amino acids that are identical between the sequences.
- Sequnce identity between two nucleic acid sequences indicates the percentage of nucleotides that are identical between the sequences.
- % identical refers, in particular, to the percentage of nucleotides or amino acids which are identical in an optimal alignment between the sequences to be compared. Said percentage is purely statistical, and the differences between the two sequences may be but are not necessarily randomly distributed over the entire length of the sequences to be compared. Comparisons of two sequences are usually carried out by comparing the sequences, after optimal alignment, with respect to a segment or "window of comparison", in order to identify local regions of corresponding sequences. The optimal alignment for a comparison may be carried out manually or with the aid of the local homology algorithm by Smith and Waterman, 1981, Ads App. Math. 2, 482, with the aid of the local homology algorithm by Neddleman and Wunsch, 1970, J.
- the algorithm parameters used for BLASTN algorithm on the NCBI website include: (i) Expect Threshold set to 10; (ii) Word Size set to 28; (iii) Max matches in a query range set to 0; (iv) Match/Mismatch Scores set to 1, -2; (v) Gap Costs set to Linear; and (vi) the filter for low complexity regions being used.
- the algorithm parameters used for BLASTP algorithm on the NCBI website include: (i) Expect Threshold set to 10; (ii) Word Size set to 3; (iii) Max matches in a query range set to 0; (iv) Matrix set to BLOSUM62; (v) Gap Costs set to Existence: 11 Extension: 1; and (vi) conditional compositional score matrix adjustment.
- Percentage identity is obtained by determining the number of identical positions at which the sequences to be compared correspond, dividing this number by the number of positions compared (e.g., the number of positions in the reference sequence) and multiplying this result by 100.
- the degree of similarity or identity is given for a region which is at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90% or about 100% of the entire length of the reference sequence.
- the degree of identity is given for at least about 100, at least about 120, at least about 140, at least about 160, at least about 180, or about 200 nucleotides, in some embodiments continuous nucleotides.
- the degree of similarity or identity is given for the entire length of the reference sequence.
- Homologous amino acid sequences exhibit according to the disclosure at least 40%, in particular at least 50%, at least 60%, at least 70%, at least 80%, at least 90% and preferably at least 95%, at least 98 or at least 99% identity of the amino acid residues.
- amino acid sequence variants described herein may readily be prepared by the skilled person, for example, by recombinant DNA manipulation.
- the manipulation of DNA sequences for preparing peptides or proteins having substitutions, additions, insertions or deletions, is described in detail in Sambrook et al. (1989), for example.
- the peptides and amino acid variants described herein may be readily prepared with the aid of known peptide synthesis techniques such as, for example, by solid phase synthesis and similar methods.
- a fragment or variant of an amino acid sequence is preferably a "functional fragment” or “functional variant".
- the term "functional fragment” or “functional variant” of an amino acid sequence relates to any fragment or variant exhibiting one or more functional properties identical or similar to those of the amino acid sequence from which it is derived, i.e., it is functionally equivalent.
- sequences of binding agents such as antibodies, one particular function is one or more binding activities displayed by the amino acid sequence from which the fragment or variant is derived.
- the modifications in the amino acid sequence of the parent molecule or sequence do not significantly affect or alter the characteristics of the molecule or sequence.
- the function of the functional fragment or functional variant may be reduced but still significantly present, e.g., binding of the functional variant may be at least 50%, at least 60%, at least 70%, at least 80%, or at least 90% of the parent molecule or sequence.
- binding of the functional fragment or functional variant may be enhanced compared to the parent molecule or sequence.
- amino acid sequence "derived from” a designated amino acid sequence (peptide, protein or polypeptide) refers to the origin of the first amino acid sequence.
- amino acid sequence which is derived from a particular amino acid sequence has an amino acid sequence that is identical, essentially identical or homologous to that particular sequence or a fragment thereof.
- Amino acid sequences derived from a particular amino acid sequence may be variants of that particular sequence or a fragment thereof.
- sequences suitable for use herein may be altered such that they vary in sequence from the naturally occurring or native sequences from which they were derived, while retaining the desirable activity of the native sequences.
- an "instructional material” or “instructions” includes a publication, a recording, a diagram, or any other medium of expression which can be used to communicate the usefulness of the compositions and methods of the invention.
- the instructional material of the kit of the invention may, for example, be affixed to a container which contains the compositions of the invention or be shipped together with a container which contains the compositions. Alternatively, the instructional material may be shipped separately from the container with the intention that the instructional material and the compositions be used cooperatively by the recipient.
- isolated means altered or removed from the natural state.
- a nucleic acid or a peptide naturally present in a living animal is not “isolated”, but the same nucleic acid or peptide partially or completely separated from the coexisting materials of its natural state is “isolated”.
- An isolated nucleic acid or protein can exist in substantially purified form, or can exist in a non-native environment such as, for example, a host cell.
- recombinant in the context of the present invention means "made through genetic engineering”.
- a “recombinant object” such as a recombinant nucleic acid in the context of the present invention is not occurring naturally.
- naturally occurring refers to the fact that an object can be found in nature.
- a peptide or nucleic acid that is present in an organism (including viruses) and can be isolated from a source in nature and which has not been intentionally modified by man in the laboratory is naturally occurring.
- Physiological pH refers to a pH of about 7.5.
- the term “genetic modification” or simply “modification” includes the transfection of cells with nucleic acid.
- the term “transfection” relates to the introduction of nucleic acids, in particular RNA, into a cell.
- the term “transfection” also includes the introduction of a nucleic acid into a cell or the uptake of a nucleic acid by such cell, wherein the cell may be present in a subject, e.g., a patient.
- a cell for transfection of a nucleic acid described herein can be present in vitro or in vivo, e.g. the cell can form part of an organ, a tissue and/or an organism of a patient.
- transfection can be transient or stable. For some applications of transfection, it is sufficient if the transfected genetic material is only transiently expressed. RNA can be transfected into cells to transiently express its coded protein. Since the nucleic acid introduced in the transfection process is usually not integrated into the nuclear genome, the foreign nucleic acid will be diluted through mitosis or degraded. Cells allowing episomal amplification of nucleic acids greatly reduce the rate of dilution. If it is desired that the transfected nucleic acid actually remains in the genome of the cell and its daughter cells, a stable transfection must occur. Such stable transfection can be achieved by using virus-based systems or transposon-based systems for transfection. Generally, nucleic acid encoding a binding agent such as an antibody is transiently transfected into cells. RNA can be transfected into cells to transiently express its coded protein. Coronavirus
- Coronaviruses are enveloped, positive-sense, single-stranded RNA ((+) ssRNA) viruses. They have the largest genomes (26-32 kb) among known RNA viruses and are phylogenetically divided into four genera (a, P, y, and 6), with betacoronaviruses further subdivided into four lineages (A, B, C, and D). Coronaviruses infect a wide range of avian and mammalian species, including humans. Some human coronaviruses generally cause mild respiratory diseases, although severity can be greater in infants, the elderly, and the immunocompromised.
- SARS-CoV-2 severe acute respiratory syndrome coronavirus-2
- SARS-CoV- 2 SARS-CoV- 2
- MN908947.3 belongs to betacoronavirus lineage B. It has at least 70% sequence similarity to SARS-CoV.
- coronaviruses have four structural proteins, namely, envelope (E), membrane (M), nucleocapsid (N), and spike (S).
- E and M proteins have important functions in the viral assembly, and the N protein is necessary for viral RNA synthesis.
- the critical glycoprotein S is responsible for virus binding and entry into target cells.
- the S protein is synthesized as a single- chain inactive precursor that is cleaved by furin-like host proteases in the producing cell into two noncovalently associated subunits, SI and S2.
- the SI subunit contains the receptor- binding domain (RBD), which recognizes the host-cell receptor.
- the S2 subunit contains the fusion peptide, two heptad repeats, and a transmembrane domain, all of which are required to mediate fusion of the viral and host-cell membranes by undergoing a large conformational rearrangement.
- the SI and S2 subunits trimerize to form a large prefusion spike.
- the S precursor protein of SARS-CoV-2 can be proteolytically cleaved into SI (685 aa) and S2 (588 aa) subunits.
- the SI subunit comprises the receptor-binding domain (RBD), which mediates virus entry into sensitive cells through the host angiotensin-converting enzyme 2 (ACE2) receptor.
- the "RBD domain” generally comprises the amino acid sequence of amino acids 327 to 528 of SEQ ID NO: 197.
- the present disclosure describes antibodies such as monospecific, bivalent antibodies capable of binding to an epitope of coronavirus spike protein (S protein). Moreover, the disclosure describes bispecific or multispecific binding agents comprising a first and a second binding domain, wherein the first binding domain is capable of binding to a coronavirus spike protein (S protein) and the second binding domain is capable of binding to the coronavirus S protein, and wherein the first and second binding domains bind to different epitopes of the coronavirus S protein.
- the binding agents, including antibodies described herein bind, in particular, to the RBD domain of coronavirus S protein.
- the binding agent or antibody described herein is isolated. In one embodiment, the binding agent or antibody described herein is a recombinant molecule.
- epitope refers to a part or fragment of a molecule or antigen such as coronavirus S protein that is recognized by a binding agent.
- the epitope may be recognized by an antibody or any other binding protein.
- An epitope may include a continuous or discontinuous portion of the antigen and may be between about 5 and about 100, such as between about 5 and about 50, more preferably between about 8 and about 30, most preferably between about 8 and about 25 amino acids in length, for example, the epitope may be preferably 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, or 25 amino acids in length. In one embodiment, an epitope is between about 10 and about 25 amino acids in length.
- epitope includes structural epitopes.
- immunoglobulin refers to a class of structurally related glycoproteins consisting of two pairs of polypeptide chains, one pair of light (L) low molecular weight chains and one pair of heavy (H) chains, all four inter-connected by disulfide bonds.
- L light
- H heavy
- each heavy chain typically is comprised of a heavy chain variable region (abbreviated herein as VH or VH) and a heavy chain constant region (abbreviated herein as CH or CH).
- VH or VH heavy chain variable region
- CH or CH heavy chain constant region
- the heavy chain constant region typically is comprised of three domains, CH1, CH2, and CH3.
- the hinge region is the region between the CH1 and CH2 domains of the heavy chain and is highly flexible. Disulphide bonds in the hinge region are part of the interactions between two heavy chains in an IgG molecule.
- Each light chain typically is comprised of a light chain variable region (abbreviated herein as VL or VL) and a light chain constant region (abbreviated herein as CL or CL).
- the light chain constant region typically is comprised of one domain, CL.
- the VH and VL regions may be further subdivided into regions of hypervariability (or hypervariable regions which may be hypervariable in sequence and/or form of structurally defined loops), also termed complementarity determining regions (CDRs), interspersed with regions that are more conserved, termed framework regions (FRs).
- CDRs complementarity determining regions
- Each VH and VL is typically composed of three CDRs and four FRs, arranged from amino-terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4 (see also Chothia and Lesk J. Mol. Biol. 196, 901-917 (1987)).
- FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4 see also Chothia and Lesk J. Mol. Biol. 196, 901-917 (1987)
- reference to amino acid positions in the constant regions in the present invention is according to the EU-numbering (Edelman et aL, Proc Natl Acad Sci U S A. 1969 May;63(l):78-85; Kabat et al., Sequences of Proteins of Immunological Interest, Fifth Edition. 1991 NIH Publication No. 91-3242).
- CDRs described herein are Kabat defined.
- amino acid corresponding to position refers to an amino acid position number in a human IgG1 heavy chain. Corresponding amino acid positions in other immunoglobulins may be found by alignment with human IgG1.
- an amino acid or segment in one sequence that "corresponds to" an amino acid or segment in another sequence is one that aligns with the other amino acid or segment using a standard sequence alignment program such as ALIGN, ClustalW or similar, typically at default settings and has at least 50%, at least 80%, at least 90%, or at least 95% identity to a human IgG1 heavy chain. It is considered well-known in the art how to align a sequence or segment in a sequence and thereby determine the corresponding position in a sequence to an amino acid position according to the present invention.
- antibody in the context of the present invention refers to an immunoglobulin molecule, a fragment of an immunoglobulin molecule, or a derivative of either thereof, which has the ability to bind, preferably specifically bind to an antigen.
- binding takes place under typical physiological conditions with a half-life of significant periods of time, such as at least about 30 minutes, at least about 45 minutes, at least about one hour, at least about two hours, at least about four hours, at least about 8 hours, at least about 12 hours, about 24 hours or more, about 48 hours or more, about 3, 4, 5, 6, 7 or more days, etc., or any other relevant functionally-defined period (such as a time sufficient to induce, promote, enhance, and/or modulate a physiological response associated with antibody binding to the antigen).
- the variable regions of the heavy and light chains of the immunoglobulin molecule contain a binding domain that interacts with an antigen.
- antibody refers to the region or domain which interacts with the antigen and typically comprises both a VH region and a VL region.
- the term antibody when used herein comprises not only monospecific antibodies, but also multispecific antibodies which comprise multiple, such as two or more, e.g. three or more, different antigen-binding regions.
- the constant regions of the antibodies (Abs) may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (such as effector cells) and components of the complement system such as Clq, the first component in the classical pathway of complement activation.
- antibody as used herein, unless otherwise stated or clearly contradicted by context, includes fragments of an antibody that are antigen-binding fragments, i.e., retain the ability to specifically bind to the antigen, and antibody derivatives, i.e., constructs that are derived from an antibody. It has been shown that the antigen-binding function of an antibody may be performed by fragments of a full-length antibody.
- antigen-binding fragments encompassed within the term "antibody” include (i) a Fab' or Fab fragment, a monovalent fragment consisting of the VL, VH, CL and CH1 domains, or a monovalent antibody as described in W02007059782 (Genmab); (ii) F(ab’) 2 fragments, bivalent fragments comprising two Fab fragments linked by a disulfide bridge at the hinge region; (iii) a Fd fragment consisting essentially of the VH and CH1 domains; (iv) a Fv fragment consisting essentially of the VL and VH domains of a single arm of an antibody, (v) a dAb fragment (Ward et al., Nature 341, 544- 546 (1989)), which consists essentially of a VH domain and also called domain antibodies (Holt et al; Trends Biotechnol-.
- the two domains of the Fv fragment, VL and VH are coded for by separate genes, they may be joined, using recombinant methods, by a synthetic linker that enables them to be made as a single protein chain in which the VL and VH regions pair to form monovalent molecules (known as single chain antibodies or single chain Fv (scFv), see for instance Bird et al., Science 242, 423-426 (1988) and Huston et al., PNAS USA 85, 5879-5883 (1988)).
- single chain antibodies are encompassed within the term antibody unless otherwise noted or clearly indicated by context.
- fragments are generally included within the meaning of antibody, they collectively and each independently are unique features of the present invention, exhibiting different biological properties and utility.
- antibody also includes polyclonal antibodies, monoclonal antibodies (mAbs), antibody-like polypeptides, such as chimeric antibodies and humanized antibodies, and antibody fragments retaining the ability to specifically bind to the antigen (antigen-binding fragments) provided by any known technique, such as enzymatic cleavage, peptide synthesis, and recombinant techniques.
- mAbs monoclonal antibodies
- antibody-like polypeptides such as chimeric antibodies and humanized antibodies
- antigen-binding fragments provided by any known technique, such as enzymatic cleavage, peptide synthesis, and recombinant techniques.
- single chain Fv or “scFv” refers to an antibody in which the variable domains of the heavy chain and of the light chain (VH and VL) of a traditional two chain antibody have been joined to form one chain.
- a linker usually a peptide is inserted between the two chains to allow for proper folding and creation of an active binding site.
- an antibody can possess any isotype.
- isotype refers to the immunoglobulin class (for instance IgG1, lgG2, lgG3, lgG4, IgD, IgA, IgE, or IgM) that is encoded by heavy chain constant region genes.
- IgG1 immunoglobulin class
- the term is not limited to a specific isotype sequence, e.g. a particular IgG1 sequence, but is used to indicate that the antibody is closer in sequence to that isotype, e.g. IgG1, than to other isotypes.
- an IgG1 antibody of the invention may be a sequence variant of a naturally-occurring IgG1 antibody, including variations in the constant regions.
- an antibody is an IgG1 antibody, more particularly an IgG1, kappa or IgG1, lambda isotype (i.e. IgG1, K, ⁇ ), an lgG2a antibody (e.g. lgG2a, K, ⁇ ), an lgG2b antibody (e.g. lgG2b, K, ⁇ ), an lgG3 antibody (e.g. lgG3, K, X) or an lgG4 antibody (e.g. lgG4, K, ⁇ ).
- IgG1 antibody more particularly an IgG1, kappa or IgG1, lambda isotype (i.e. IgG1, K, ⁇ ), an lgG2a antibody (e.g. lgG2a, K, ⁇ ), an lgG2b antibody (e.g. lgG2b, K, ⁇ ), an lgG3 antibody (e.g. lgG3, K,
- the term "monoclonal antibody” as used herein refers to a preparation of antibody molecules of single molecular composition.
- a monoclonal antibody composition displays a single binding specificity and affinity for a particular epitope.
- the term “human monoclonal antibody” refers to antibodies displaying a single binding specificity which have variable and constant regions derived from human germline immunoglobulin sequences.
- the human monoclonal antibodies may be generated by a hybridoma which includes a B cell obtained from a transgenic or transchromosomal non-human animal, such as a transgenic mouse, having a genome comprising a human heavy chain transgene and a light chain transgene, fused to an immortalized cell.
- chimeric antibody refers to an antibody wherein the variable region is derived from a non-human species (e.g. derived from rodents) and the constant region is derived from a different species, such as human. Chimeric monoclonal antibodies for therapeutic applications are developed to reduce antibody immunogenicity.
- the chimeric antibody may be a genetically or an enzymatically engineered recombinant antibody. It is within the knowledge of the skilled person to generate a chimeric antibody, and thus, generation of the chimeric antibody according to the present invention may be performed by other methods than described herein.
- humanized antibody refers to a genetically engineered non-human antibody, which contains human antibody constant domains and non-human variable domains modified to contain a high level of sequence homology to human variable domains. This can be achieved by grafting of the six non-human antibody complementarity-determining regions (CDRs), which together form the antigen binding site, onto a homologous human acceptor framework region (FR) (see WO92/22653 and EP0629240). In order to fully reconstitute the binding affinity and specificity of the parental antibody, the substitution of framework residues from the parental antibody (i.e. the non-human antibody) into the human framework regions (back-mutations) may be required.
- CDRs complementarity-determining regions
- FR homologous human acceptor framework region
- a humanized antibody may comprise non-human CDR sequences, primarily human framework regions optionally comprising one or more amino acid back-mutations to the non-human amino acid sequence, and fully human constant regions.
- additional amino acid modifications which are not necessarily back- mutations, may be applied to obtain a humanized antibody with preferred characteristics, such as affinity and biochemical properties.
- human antibody refers to antibodies having variable and constant regions derived from human germline immunoglobulin sequences. Human antibodies may include amino acid residues not encoded by human germline immunoglobulin sequences (e.g., mutations introduced by random or site-specific mutagenesis in vitro or by somatic mutation in vivo). However, the term “human antibody”, as used herein, is not intended to include antibodies in which CDR sequences derived from the germline of another mammalian species, such as a mouse or rat, have been grafted onto human framework sequences.
- Human monoclonal antibodies can be produced by a variety of techniques, including conventional monoclonal antibody methodology, e.g., the standard somatic cell hybridization technique of Kohler and Milstein, Nature 256: 495 (1975). Although somatic cell hybridization procedures are preferred, in principle, other techniques for producing monoclonal antibody can be employed, e.g., viral or oncogenic transformation of B-lymphocytes or phage display techniques using libraries of human antibody genes. A suitable animal system for preparing hybridomas that secrete human monoclonal antibodies is the murine system. Hybridoma production in the mouse is a very well established procedure. Immunization protocols and techniques for isolation of immunized splenocytes for fusion are known in the art.
- Fusion partners e.g., murine myeloma cells
- Human monoclonal antibodies can thus e.g. be generated usingtransgenic or transchromosomal mice or rats carrying parts of the human immune system rather than the mouse or rat system.
- a human antibody is obtained from a transgenic animal, such as a mouse or a rat, carrying human germline immunoglobulin sequences instead of animal immunoglobulin sequences.
- the antibody originates from human germline immunoglobulin sequences introduced in the animal, but the final antibody sequence is the result of said human germline immunoglobulin sequences being further modified by somatic hypermutations and affinity maturation by the endogeneous animal antibody machinery, see e.g. Mendez et al. 1997 Nat Genet. 15(2):146-56.
- Fab-arm binding arm
- arm includes one heavy chain-light chain pair and is used interchangeably with “half- molecule” herein.
- full-length when used in the context of an antibody indicates that the antibody is not a fragment, but contains all of the domains of the particular isotype normally found for that isotype in nature, e.g. the VH, CH1, CH2, CH3, hinge, VL and CL domains for an IgG1 antibody.
- Fc region refers to an antibody region consisting of the two Fc sequences of the heavy chains of an immunoglobulin, wherein said Fc sequences comprise at least a hinge region, a CH2 domain, and a CH3 domain.
- binding or “capable of binding” in the context of the binding of an antibody to a predetermined antigen or epitope typically is a binding with an affinity corresponding to a K D of about 10 -7 M or less, such as about 10 -8 M or less, such as about 10 -9 M or less, about 10 -10 M or less, or about 10 -11 M or even less, when determined using Bio- Layer Interferometry (BLI), or, for instance, when determined using surface plasmon resonance (SPR) technology in a BIAcore 3000 instrument using the antigen as the ligand and the antibody as the analyte.
- BLI Bio- Layer Interferometry
- SPR surface plasmon resonance
- the antibody binds to the predetermined antigen with an affinity corresponding to a K D that is at least ten-fold lower, such as at least 100-fold lower, for instance at least 1,000-fold lower, such as at least 10,000-fold lower, for instance at least 100,000-fold lower than its affinity for binding to a non-specific antigen (e.g., BSA, casein) other than the predetermined antigen or a closely-related antigen.
- a non-specific antigen e.g., BSA, casein
- the amount with which the affinity is lower is dependent on the KD of the antibody, so that when the K D of the antibody is very low (that is, the antibody is highly specific), then the degree to which the affinity for the antigen is lower than the affinity for a non-specific antigen may be at least 10,000-fold.
- the term "k d " (sec 1 ), as used herein, refers to the dissociation rate constant of a particular antibody-antigen interaction. Said value is also referred to as the k off value.
- K D (M), as used herein, refers to the dissociation equilibrium constant of a particular antibody-antigen interaction.
- the present invention also envisions antibodies comprising functional variants of the VL regions, VH regions, or one or more CDRs of the antibodies described herein.
- a functional variant of a VL, VH, or CDR used in the context of an antibody still allows the antibody to retain at least a substantial proportion (at least about 50%, 60%, 70%, 80%, 90%, 95% or more) of the affinity and/or the specificity/selectivity of the "reference" or "parent” antibody and in some cases, such an antibody may be associated with greater affinity, selectivity and/or specificity than the parent antibody.
- Such functional variants typically retain significant sequence identity to the parent antibody.
- exemplary variants include those which differ from VH and/or VL and/or CDR regions of the parent antibody sequences mainly by conservative substitutions; for instance, up to 10, such as 9, 8, 7, 6, 5, 4, 3, 2 or 1 of the substitutions in the variant are conservative amino acid residue replacements.
- VL regions, or VH regions Functional variants of antibody sequences described herein such as VL regions, or VH regions, or antibody sequences having a certain degree of homology or identity to antibody sequences described herein such as VL regions, or VH regions preferably comprise modifications or variations in the non-CDR sequences, while the CDR sequences preferably remain unchanged.
- the term "specificity” as used herein is intended to have the following meaning unless contradicted by context. Two antibodies have the "same specificity" if they bind to the same antigen and the same epitope.
- Compets and “competition” may refer to the competition between a first antibody and a second antibody to the same antigen.
- competes and “competition” may also refer to the competition between an antibody and an endogenous ligand for binding to the corresponding receptor of the endogenous ligand. If an antibody prevents the binding of the endogenous ligand to its receptor, such an antibody is said to block the endogenous interaction of the ligand with its receptor and therefore is competing with the endogenous ligand.
- cross-competition assay which may e.g. be performed as an ELISA or by flow- cytometry.
- competition may be determined using biolayer interferometry.
- Antibodies which compete for binding to a target antigen may bind different epitopes on the antigen, wherein the epitopes are so close to each other that a first antibody binding to one epitope prevents binding of a second antibody to the other epitope. In other situations, however, two different antibodies may bind the same epitope on the antigen and would compete for binding in a competition binding assay. Such antibodies binding to the same epitope are considered to have the same specificity herein. Thus, in one embodiment, antibodies binding to the same epitope are considered to bind to the same amino acids on the target molecule.
- That antibodies bind to the same epitope on a target antigen may be determined by standard alanine scanning experiments or antibody-antigen crystallization experiments known to a person skilled in the art.
- antibodies or binding domains binding to different epitopes of coronavirus S protein are not competing with each other for binding to their respective epitopes.
- the binding agent of the invention can in principle comprise an antibody of any isotype.
- the choice of isotype typically will be guided by the desired Fc-mediated effector functions, such as ADCC induction, or the requirement for an antibody devoid of Fc-mediated effector function ("inert" antibody).
- Exemplary isotypes are IgG1, lgG2, lgG3, and lgG4. Either of the human light chain constant regions, kappa or lambda, may be used.
- the effector function of the antibodies of the present invention may be changed by isotype switching to, e.g., an IgG1, lgG2, lgG3, lgG4, IgD, IgA, IgE, or IgM antibody for various therapeutic uses.
- both heavy chains of an antibody of the present invention are of the IgG1 isotype, for instance an lgGl,K.
- the heavy chain may be modified in the hinge and/or CH3 region as described elsewhere herein.
- each of the antigen-binding regions or domains comprises a heavy chain variable region (VH) and a light chain variable region (VL), and wherein said variable regions each comprise three CDR sequences, CDR1, CDR2 and CDR3, respectively, and four framework sequences, FR1, FR2, FR3 and FR4, respectively.
- the antibody comprises two heavy chain constant regions (CH), and two light chain constant regions (CL).
- the binding agent comprises a full-length antibody, such as a full-length IgG1 antibody.
- the binding agent comprises an antibody fragment, such as a Fab' or Fab fragment, a monovalent fragment consisting of the VL, VH, CL and CH1 domains, a monovalent antibody as described in W02007059782 (Genmab), a F(ab')2 fragment, a Fd fragment, a Fv fragment, a dAb fragment, camelid or nanobodies, or an isolated complementarity determining region (CDR).
- an antibody fragment such as a Fab' or Fab fragment, a monovalent fragment consisting of the VL, VH, CL and CH1 domains, a monovalent antibody as described in W02007059782 (Genmab), a F(ab')2 fragment, a Fd fragment, a Fv fragment, a dAb fragment, camelid or nanobodies, or an isolated complementarity determining region (CDR).
- an antibody fragment such as a Fab' or Fab fragment, a monovalent fragment consisting of the VL, VH, CL
- binding agent in the context of the present invention refers to any agent capable of binding to desired antigens.
- the binding agent is or comprises an antibody, antibody fragment, or any other binding protein, or any combination thereof.
- One preferred combination is a combination of an antibody, e.g., a full- length antibody, binding to a first epitope of the coronavirus S protein coupled, in particularly covalently, to one or more, such as two binding proteins binding to a different epitope of the coronavirus S protein.
- the binding protein comprises an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof.
- ECD extracellular domain
- the binding protein comprises an antibody fragment such as scFv.
- the binding agent may also comprise synthetic, modified or non- naturally occurring moieties, in particular non-peptide moieties. Such moieties may, for example, link desired antigen-binding functionalities or regions such as antibodies or antibody fragments.
- the binding agent is a synthetic construct comprising antigen- binding CDRs or variable regions.
- Naturally occurring antibodies are generally monospecific, i.e. they bind to a single antigen.
- the present invention provides binding agents binding to different epitopes on coronavirus S protein. Such binding agents are at least bispecific or multispecific such as trispecific, tetraspecific and so on.
- the binding agent may comprise two or more antibodies as described herein or fragments thereof.
- a binding agent described herein may be an artificial protein that is composed of two different antibodies, an antibody and a fragment of a different antibody, and fragments of two different antibodies (said fragments of two different antibodies forming two binding domains).
- a bispecific binding agent in particular a bispecific protein, such as a bispecific antibody is a molecule that has two different binding specificities and thus may bind to two epitopes.
- a bispecific antibody refers to an antibody comprising two antigen-binding sites, a first binding site having affinity for a first epitope and a second binding site having binding affinity for a second epitope distinct from the first.
- bispecific in the context of the present invention refers to an agent having two different antigen-binding regions binding to different epitopes, in particular different epitopes on the same antigen, e.g. coronavirus S protein.
- Multispecific binding agents are molecules which have more than two different binding specificities.
- a bispecific binding agent according to the present invention is not limited to any particular bispecific format or method of producing it.
- bispecific antibody molecules which may be used in the present invention comprise (i) a single antibody that has two arms comprising different antigen-binding regions; (ii) a single chain antibody that has specificity to two different epitopes, e.g., via two scFvs linked in tandem by an extra peptide linker; (iii) a dual-variable-domain antibody (DVD-lg), where each light chain and heavy chain contains two variable domains in tandem through a short peptide linkage (Wu et al., Generation and Characterization of a Dual Variable Domain Immunoglobulin (DVD-lgTM) Molecule, In: Antibody Engineering, Springer Berlin Heidelberg (2010)); (iv) a chemically-linked bispecific (Fab')2 fragment; (v) a Tandab, which is a fusion of two single chain diabodies resulting in a tetravalent
- the binding agent of the present invention is a diabody or a cross-body.
- the binding agent of the invention is a bispecific antibody obtained via a controlled Fab-arm exchange (such as described in WO2011131746 (Genmab)).
- binding agents include but are not limited to (i) IgG-like molecules with complementary CH3 domains to force heterodimerization; (ii) recombinant IgG-like dual targeting molecules, wherein the two sides of the molecule each contain the Fab fragment or part of the Fab fragment of at least two different antibodies; (iii) IgG fusion molecules, wherein full length IgG antibodies are fused to extra Fab fragment or parts of Fab fragment; (iv) Fc fusion molecules, wherein single chain Fv molecules or stabilized diabodies are fused to heavy-chain constant-domains, Fc regions or parts thereof; (v) Fab fusion molecules, wherein different Fab-fragments are fused together, fused to heavy-chain constant-domains, Fc regions or parts thereof; and (vi) ScFv- and diabody-based and heavy chain antibodies (e.g., domain antibodies, nanobodies) wherein different single chain Fv molecules or different diabodies or different heavy-chain antibodies
- IgG-like molecules with complementary CH3 domain molecules include but are not limited to the Triomab/Quadroma molecules (Trion Pharma/Fresenius Biotech; Roche, W02011069104), the so-called Knobs-into-Holes molecules (Genentech, WO9850431), CrossMAbs (Roche, W02011117329) and the electrostatically-matched molecules (Amgen, EP1870459 and W02009089004; Chugai, US201000155133; Oncomed, W02010129304), the LUZ-Y molecules (Genentech, Wranik et al. J. Biol. Chem.
- IgG-like dual targeting molecules examples include but are not limited to Dual Targeting (DT)-lg molecules (W02009058383), Two-in-one Antibody (Genentech; Bostrom, et al 2009. Science 323, 1610-1614.), Cross-linked Mabs (Karmanos Cancer Center), mAb2 (F- Star, W02008003116), Zybody molecules (Zyngenia; LaFleur et al. MAbs.
- DT Dual Targeting
- W02009058383 Two-in-one Antibody
- mAb2 F- Star, W02008003116
- Zybody molecules Zyngenia; LaFleur et al. MAbs.
- IgG fusion molecules include but are not limited to Dual Variable Domain (DVD)- Ig molecules (Abbott, US7,612,181), Dual domain double head antibodies (Unilever; Sanofi Aventis, W020100226923), IgG-like Bispecific molecules (ImClone/Eli Lilly, Lewis et al. Nat BiotechnoL 2014 Feb;32(2):191-8), Ts2Ab (Medlmmune/AZ; Dimasi et al. J Mol Biol.
- DVD Dual Variable Domain
- BsAb molecules Zymogenetics, W02010111625), HERCULES molecules (Biogen personal, US007951918), scFv fusion molecules (Novartis), scFv fusion molecules (Changzhou Adam Biotech Inc, CN 102250246) and TvAb molecules (Roche, WO2012025525, W02012025530).
- Fc fusion molecules include but are not limited to ScFv/Fc Fusions (Pearce et al., Biochem Mol Biol Int. 1997 Sep;42(6):1179-88), SCORPION molecules (Emergent BioSolutions/Trubion, Blankenship JW, et al. AACR 100th Annual meeting 2009 (Abstract # 5465); Zymogenetics/BMS, W02010111625), Dual Affinity Retargeting Technology (Fc-DART) molecules (MacroGenics, WO2008157379, W02010080538) and Dual(ScFv)2-Fab molecules (National Research Center for Antibody Medicine - China).
- Fab fusion bispecific antibodies include but are not limited to F(ab)2 molecules (Medarex/AMGEN; Deo et al J Immunol. 1998 Feb 15;160(4):1677-86.), Dual-Action or Bis-Fab molecules (Genentech, Bostrom, et al 2009. Science 323, 1610-1614.), Dock-and-Lock (DNL) molecules (ImmunoMedics, W02003074569, W02005004809), Bivalent Bispecific molecules (Biotecnol, Schoonjans, J Immunol. 2000 Dec 15;165(12):7050-7.) and Fab-Fv molecules (UCB- Celltech, WO 2009040562 Al).
- ScFv-, diabody-based and domain antibodies include but are not limited to Bispecific T Cell Engager (BiTE) molecules (Micromet, W02005061547), Tandem Diabody molecules (TandAb) (Affimed) Le Gall et aL, Protein Eng Des Sei. 2004 Apr;17(4):357-66.), Dual Affinity Retargeting Technology (DART) molecules (MacroGenics, WO2008157379, W02010080538), Single-chain Diabody molecules (Lawrence, FEBS Lett.
- BiTE Bispecific T Cell Engager
- TandAb Tandem Diabody molecules
- DART Dual Affinity Retargeting Technology
- TCR-like Antibodies AIT, ReceptorLogics
- Human Serum Albumin ScFv Fusion Merrimack, W02010059315
- COMBODY molecules Epigen Biotech, Zhu et al. Immunol Cell Biol. 2010 Aug;88(6):667-75.
- dual targeting nanobodies Ablynx, Hmila et aL, FASEB J. 2010
- dual targeting heavy chain only domain antibodies
- the bispecific antibody of the invention comprises a first Fc sequence comprising a first CH3 region, and a second Fc sequence comprising a second CH3 region, wherein the sequences of the first and second CH3 regions are different and are such that the heterodimeric interaction between said first and second CH3 regions is stronger than each of the homodimeric interactions of said first and second CH3 regions. More details on these interactions and how they can be achieved are provided in WO2011131746 and W02013060867 (Genmab), which are hereby incorporated by reference.
- Another strategy to promote formation of heterodimers over homodimers is a "knob-into-hole” strategy in which a protuberance is introduced on a first heavy-chain polypeptide and a corresponding cavity in a second heavy- chain polypeptide, such that the protuberance can be positioned in the cavity at the interface of these two heavy chains so as to promote heterodimer formation and hinder homodimer formation.
- protuberances are constructed by replacing small amino-acid side-chains from the interface of the first polypeptide with larger side chains.
- Compensatory "cavities" of identical or similar size to the protuberances are created in the interface of the second polypeptide by replacing large amino-acid side-chains with smaller ones (US patent 5,731,168).
- EP1870459 Chougai
- W02009089004 Amgen
- EP1870459 Chougai
- W02009089004 Amgen
- one or more residues that make up the CH3-CH3 interface in both CH3 domains are replaced with a charged amino acid such that homodimer formation is electrostatically unfavorable and heterodimerization is electrostatically favorable.
- W02007110205 Merck
- W02007110205 describe yet another strategy, wherein differences between IgA and IgG CH3 domains are exploited to promote heterodimerization.
- bispecific antibodies Another in vitro method for producing bispecific antibodies has been described in WO2008119353 (Genmab), wherein a bispecific antibody is formed by "Fab-arm” or "half- molecule” exchange (swapping of a heavy chain and attached light chain) between two monospecific lgG4- or lgG4-like antibodies upon incubation under reducing conditions.
- the resulting product is a bispecific antibody having two Fab arms which may comprise different sequences.
- bispecific antibody includes diabodies.
- Diabodies are bivalent, bispecific antibodies in which VH and VL domains are expressed on a single polypeptide chain, but using a linker that is too short to allow for pairing between the two domains on the same chain, thereby forcing the domains to pair with complementary domains of another chain and creating two antigen binding sites (see e.g. , Holliger, P., et al. (1993) Proc. Natl. Acad. Sci. USA 90: 6444- 6448; Poljak, R. J., et al. (1994) Structure 2: 1121-1123).
- Bispecific antibodies also include bispecific single chain antibodies.
- bispecific single chain antibody denotes a single polypeptide chain comprising two binding domains.
- the term “bispecific single chain antibody” or “single chain bispecific antibody” or related terms in accordance with the present invention preferably mean antibody constructs resulting from joining at least two antibody variable regions in a single polypeptide chain devoid of the constant and/or Fc portion(s) present in full immunoglobulins.
- a bispecific single chain antibody may be a construct with a total of two antibody variable regions, for example two VH regions, each capable of specifically binding to a separate epitope, and connected with one another through a short polypeptide spacer such that the two antibody variable regions with their interposed spacer exist as a single contiguous polypeptide chain.
- bispecific single chain antibody may be a single polypeptide chain with three antibody variable regions.
- two antibody variable regions for example one VH and one VL, may make up an scFv, wherein the two antibody variable regions are connected to one another via a synthetic polypeptide linker, the latter often being genetically engineered so as to be minimally immunogenic while remaining maximally resistant to proteolysis.
- This scFv is capable of specifically binding to a particular epitope, and is connected to a further antibody variable region, for example a VH region, capable of binding to a different epitope than that bound by the scFv.
- Yet another example of a bispecific single chain antibody may be a single polypeptide chain with four antibody variable regions.
- the first two antibody variable regions may form one scFv capable of binding to one epitope, whereas the second VH region and VL region may form a second scFv capable of binding to another epitope.
- individual antibody variable regions of one specificity may advantageously be separated by a synthetic polypeptide linker, whereas the respective scFvs may advantageously be separated by a short polypeptide spacer as described above.
- the first binding domain of the bispecific antibody comprises one antibody variable domain, preferably a VHH domain.
- the first binding domain of the bispecific antibody comprises two antibody variable domains, preferably a scFv, i.e. VH-VL or VL-VH.
- the second binding domain of the bispecific antibody comprises one antibody variable domain, preferably a VHH domain.
- the second binding domain of the bispecific antibody comprises two antibody variable domains, preferably a scFv, i.e. VH-VL or VL-VH.
- the total number of antibody variable regions in the bispecific antibody according to the invention is thus only two. For example, such an antibody could comprise two VH or two VHH domains.
- the first binding domain and the second binding domain of the bispecific antibody each comprise one antibody variable domain, preferably a VHH domain.
- the first binding domain and the second binding domain of the bispecific antibody each comprise two antibody variable domains, preferably a scFv, i.e. VH- VL or VL-VH.
- the binding agent preferably comprises (i) a heavy chain variable domain (VH) of a first antibody, (ii) a light chain variable domain (VL) of a first antibody, (iii) a heavy chain variable domain (VH) of a second antibody and (iv) a light chain variable domain (VL) of a second antibody.
- the bispecific molecules according to the invention comprises two Fab regions, each being directed against different epitopes of coronavirus S protein.
- the molecule of the invention is an antigen binding fragment (Fab)2 complex.
- the Fab2 complex is composed of two Fab fragments, one Fab fragment comprising a Fv domain, i.e. VH and VL domains, specific for one epitope of coronavirus S protein, and the other Fab fragment comprising a Fv domain specific for another epitope of coronavirus S protein.
- Each of the Fab fragments may be composed of two single chains, a VL-CL module and a VH-CH module.
- each of the individual Fab fragments may be arranged in a single chain, preferably, VL-CL-CH-VH, and the individual variable and constant domains may be connected with a peptide linker.
- the individual single chains and Fab fragments may be connected via disulfide bonds, adhesive domains, chemically linked and/or peptide linker.
- the bispecific molecule may also comprise more than two Fab fragments, in particular, the molecule may be a Fab3, Fab4, or a multimeric Fab complex with specificity for 2, 3, 4, or more different epitopes.
- the invention also includes chemically linked Fabs.
- the binding agent according to the invention includes various types of bivalent and trivalent single-chain variable fragments (scFvs), fusion proteins mimicking the variable domains of two antibodies.
- Divalent (or bivalent) single-chain variable fragments di- scFvs, bi-scFvs
- di- scFvs, bi-scFvs can be engineered by linking two scFvs. This can be done by producing a single peptide chain with two VH and two VL regions, yielding tandem scFvs.
- the invention also includes multispecific molecules comprising more than two scFvs binding domains.
- the molecule comprises either multiple antigen specificities and is a trispecific, tetraspecific, or multispecific molecule, or the molecule is a bispecific molecule comprising more than one scFv binding domain with specificity for the same antigen.
- the molecule of the invention may be a multispecific single chain Fv.
- a particularly preferred example of a bispecific antibody fragment is a diabody (Kipriyanov, Int. J. Cancer 77 (1998), 763-772), which is a small bivalent and bispecific antibody fragment.
- Diabodies comprise a heavy chain variable domain (VH) and a light chain variable domain (VL) on the same polypeptide chain (VH-VL) connected by a peptide linker that is too short to allow pairing between the two domains on the same chain. This forces pairing with the complementary domains of another chain and promotes the assembly of a dimeric molecule with two functional antigen binding sites.
- the bispecific or multispecific molecule according to the invention comprises variable (VH, VL) and constant domains (C) of immunoglobulins.
- the bispecific molecule is a minibody, preferably, a minibody comprising two single VH-VL-C chains that are connected with each other via the constant domains (C) of each chain.
- variable heavy chain regions VH
- VL variable light chain regions
- constant domains C
- VH variable heavy chain regions
- VL variable light chain regions
- C constant domains
- Epitope 1 refers to a first epitope of coronavirus S protein
- Epitope 2 refers to a second epitope of coronavirus S protein. Pairing of the constant domains results in formation of the minibody.
- the bispecific binding agent of the invention is in the format of a bispecific single chain antibody construct, whereby said construct comprises or consists of at least two binding domains.
- each binding domain comprises one variable region from an antibody heavy chain ("VH region"), wherein the VH region of the first binding domain specifically binds to Epitope 1 of a coronavirus S protein, and the VH region of the second binding domain specifically binds to Epitope 2 of a coronavirus S protein.
- VH region antibody heavy chain
- the two binding domains are optionally linked to one another by a short polypeptide spacer.
- Each binding domain may additionally comprise one variable region from an antibody light chain ("VL region"), the VH region and VL region within each of the first and second binding domains being linked to one another via a polypeptide linker long enough to allow the VH region and VL region of the first binding domain and the VH region and VL region of the second binding domain to pair with one another.
- VL region an antibody light chain
- the binding agent described herein comprises an antibody, e.g., a full- length antibody, comprising the first binding domain.
- the binding agent described herein comprises an antibody fragment such as scFv comprising the second binding domain which is covalently linked to the antibody comprising the first binding domain.
- the binding agent comprises the antibody fragment such as scFv covalently linked to the N-terminus or C-terminus of the light chain of the antibody.
- the binding agent described herein comprises an antibody, e.g., a full- length antibody, comprising the first binding domain.
- the binding agent described herein comprises an extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein orthe variant thereof comprisingthe second binding domain which is covalently linked to the antibody comprising the first binding domain.
- the binding agent comprises the extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof covalently linked to the N-terminus or C-terminus of the light chain of the antibody.
- the antibody and antibody fragment or extracellular domain (ECD) of ACE2 protein or a variant thereof, or a fragment of the ECD of ACE2 protein or the variant thereof may be linked by a GS-linker such as (Gly4Ser)l, (Gly4Ser)2, (Gly4Ser)3, (Gly4Ser)4 or (Gly4Ser)5.
- Angiotensin-converting enzyme 2 (ACE2) belongs to the angiotensin-converting enzyme family of dipeptidyl carboxypeptidases and is a transmembrane protein that is present in most organs, with the highest levels of ACE2 being detected in the cardiovascular system, gut, kidneys, and lungs.
- ACE2 is attached to the cell membrane of lung type II alveolar cells, enterocytes of the small intestine, arterial and venous endothelial cells, and arterial smooth muscle cells.
- ACE2 is a key regulator of the renin-angiotensin system (RAS) and serves as a counterbalance to Angiotensin-converting enzyme 1 (ACE) activity.
- RAS renin-angiotensin system
- ACE Angiotensin-converting enzyme 1
- ACE2 catalyzes the cleavage of angiotensin II into angiotensin 1-7, with angiotensin 1-7 activity resulting in a counterbalance to the detrimental effects of angiotensin II by promoting vasodilation and cardioprotection. Therefore, ACE2 protects against RAS-induced injuries, and partial loss of ACE2 has been linked to increased susceptibility to heart disease, while clinical trials with intravenous infusion of recombinant human ACE2 in patients with pulmonary arterial hypertension results in a decrease in plasma angiotensin ll/angiotensin 1-7 ratios and a therapeutic effect. In addition, ACE2 has been shown to play a protective role in lung injury.
- Murine acute respiratory distress syndrome (ARDS) models have shown that loss of ACE2 expression results in enhanced vascular permeability, increased lung edema, and worsened lung function, while treatment with catalytically active recombinant ACE2 protein improves symptoms of acute lung injury in wild-type and in ACE2 knockout mice. Furthermore, ACE2 and other components of the renin-angiotensin system may play a central role in controlling the severity of acute lung failure once a respiratory disease process has started.
- ACE2 is a type I transmembrane protein of 805 amino acids and contains a short cytoplasmic domain, a transmembrane domain, and a large ectodomain.
- the catalytic domain of ACE2 is found in the extracellular domain (ECD) of the ectodomain, resulting in the ACE2 active site being poised to metabolize circulating peptides such as angiotensin II.
- the extracellular region of human ACE2 is comprised of two domains, a zinc metallopeptidase domain (residues 19 to 611) and a second domain located at the C-terminus (residues 612 to 740).
- the metallopeptidase domain can be further divided into two catalytic subdomains, an N-terminal subdomain I and a C-terminal subdomain II, with these two subdomains being connected at the floor of the active site cleft.
- Multiple amino acid residues have been identified as playing an important role in ACE2 substrate binding and activity.
- Arg273 makes a salt- bridge with the C-terminus of ACE2 inhibitor, MLN-4760, and is therefore proposed to be involved in binding the C-terminus of ACE2 substrates.
- Arg273 results in a change from a positive to neutral charge in the side chain at this position, resulting in loss of ACE2 activity and showing that a positive side chain of Arg273 is critical to substrate binding.
- Another amino acid residue, His345 plays an important role in ACE2 activity by acting as a key hydrogen bond donor/acceptor and has been shown to form hydrogen bonds with both the C-terminus and the secondary amine group of MLN-4760. Mutating His345 to a leucine (H345L), results in approximately 300-fold less activity when compared to wild-type ACE2.
- His374 and His378 are two of three amino acids that comprise the zinc coordination sphere, and thus play a crucial role in coordinating the zinc binding site of ACE2.
- ACE2 was identified as a receptor for the severe acute respiratory syndrome coronavirus (SARS-CoV-1) and an important factor in severe acute respiratory syndrome (SARS) pathogenesis.
- SARS-CoV-1 severe acute respiratory syndrome coronavirus
- a region of the ACE2 ECD which includes the first a-helix and Lys353 and proximal residues of the N-terminus of ⁇ -sheet 5, interacts with high affinity with the receptor-binding domain (RBD) of a SARS-CoV-1 spike protein.
- RBD receptor-binding domain
- This interaction between a SARS-CoV-1 spike protein and a cell-associated ACE2 protein is a key component of SARS-CoV- 1 activity, and correlates with infection of human airway epithelia by SARS-CoV-1.
- SARS-CoV-1 binding of SARS-CoV-1 to ACE2 leads to a reduction of cell surface ACE2 by ACE2 endocytosis with SARS-CoV-1 and ACE2 shedding, thus resulting in a loss of ACE2-mediated tissue protection.
- the novel, severe acute respiratory syndrome coronavirus 2 shows a 73% similarity in its RBD when compared to the SARS-CoV-1 RBD, and has also been shown to bind to ACE2 to promote viral entry into cells. Similar to SARS-CoV-1, SARS-CoV-2 binds to the ACE2 protein through the RBD of its spike protein.
- the SARS-CoV-2 RBM forms a larger binding interface and more contacts with ACE2 and more favourable binding, with some studies suggesting that it has a 10-20 fold higher binding affinity for ACE2 when compared to SARS-CoV-1 RBM.
- ACE2 or "ACE2 protein” relates to human ACE2 or a variant thereof, or a fragment of the ACE2 or the variant thereof.
- “ACE2” or “ACE2 protein” comprises the amino acid sequence of SEQ ID NO: 130, an amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of SEQ ID NO: 130, or a fragment of the amino acid sequence of SEQ ID NO: 130, or the amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of SEQ ID NO: 130.
- “ACE2” or “ACE2 protein” comprises the amino acid sequence of SEQ ID NO: 130.
- extracellular domain of ACE2 refers to an extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof.
- extracellular domain of ACE2 relates to an extracellular domain of human ACE2 or a variant thereof, or a fragment of the extracellular domain of human ACE2 or the variant thereof.
- an extracellular domain of ACE2 comprises the amino acid sequence of amino acids 18 to 615 of SEQ ID NO: 130, an amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of amino acids 18 to 615 of SEQ ID NO: 130, or a fragment of the amino acid sequence of amino acids 18 to 615 of SEQ ID NO: 130, or the amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of amino acids 18 to 615 of SEQ ID NO: 130.
- an extracellular domain of ACE2 comprises the amino acid sequence of amino acids 18 to 615 of SEQ ID NO: 130.
- An extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof may comprise modifications that, for example, avoid enzymatic activity and/or substrate binding.
- an extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof is modified so that the extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof exerts enzymatic activity and/or binds substrate to a lesser extent relative to an extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof which is identical, except for not comprising the modifications.
- amino acid positions that may be modified include positions R273, H345, H374, and H378.
- the amino acid in at least one position corresponding to R273, H345, H374, and H378 may be Q, L, N, and N, respectively.
- the amino acids in the positions corresponding to R273, H345, H374, and H378 are Q, L, N, and N.
- an extracellular domain of ACE2 comprises the amino acid sequence of SEQ ID NO: 129, an amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of SEQ ID NO: 129, or a fragment of the amino acid sequence of SEQ ID NO: 129, or the amino acid sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the amino acid sequence of of SEQ ID NO: 129.
- an extracellular domain of ACE2 comprises the amino acid sequence of SEQ ID NO: 129.
- an extracellular domain of ACE2 or a variant thereof, or a fragment of the extracellular domain of ACE2 or the variant thereof binds to a coronavirus S protein.
- the binding agent according to the present invention comprises, in addition to the antigen-binding regions, an Fc region consisting of the Fc sequences of the two heavy chains.
- the first and second Fc sequences may each be of any isotype, including, but not limited to, IgG1, lgG2, lgG3 and lgG4, and may comprise one or more mutations or modifications.
- each of the first and second Fc sequences is of the lgG4 isotype or derived therefrom, optionally with one or more mutations or modifications.
- each of the first and second Fc sequences is of the IgG1 isotype or derived therefrom, optionally with one or more mutations or modifications.
- one of the Fc sequences is of the IgG1 isotype and the other of the lgG4 isotype, or is derived from such respective isotypes, optionally with one or more mutations or modifications.
- one or both Fc sequences are effector-function- deficient.
- the Fc sequence(s) may be of an lgG4 isotype, or a non-lgG4 type, e.g. IgG1, lgG2 or lgG3, which has been mutated such that the ability to mediate effector functions, such as ADCC, has been reduced or even eliminated.
- Such mutations have e.g. been described in Dall'Acqua WF et al., J Immunol. 177(2):1129-1138 (2006) and Hezareh M, J Virol.; 75(24):12161-12168 (2001).
- one or both Fc sequences comprise an IgG1 wildtype sequence.
- effector functions in the context of the present invention includes any functions mediated by components of the immune system that result, for example, in the killing of diseased cells such as tumor cells, or in the inhibition of tumor growth and/or inhibition of tumor development, including inhibition of tumor dissemination and metastasis.
- the effector functions in the context of the present invention are T cell mediated effector functions.
- Such functions comprise ADCC, ADCP or CDC.
- ADCC Antibody-dependent cell-mediated cytotoxicity
- cytotoxic effector cell through a nonphagocytic process, characterised by the release of the content of cytotoxic granules or by the expression of cell death-inducing molecules.
- ADCC is independent of the immune complement system that also lyses targets but does not require any other cell.
- ADCC is triggered through interaction of target-bound antibodies (belonging to IgG or IgA or IgE classes) with certain Fc receptors (FcRs), glycoproteins present on the effector cell surface that bind the Fc region of immunoglobulins (Ig).
- ADCC effectsor cells that mediate ADCC include natural killer (NK) cells, monocytes, macrophages, neutrophils, eosinophils and dendritic cells.
- NK natural killer
- ADCC is a rapid effector mechanism whose efficacy is dependent on a number of parameters (density and stability of the antigen on the surface of the target cell; antibody affinity and FcR-binding affinity).
- ADCC involving human IgG1, the most used IgG subclass for therapeutic antibodies, is highly dependent on the glycosylation profile of its Fc portion and on the polymorphism of Fey receptors.
- ADCP Antibody-dependent cellular phagocytosis
- Complement-dependent cytotoxicity is another cell-killing method that can be directed by antibodies.
- IgM is the most effective isotype for complement activation.
- IgG1 and lgG3 are also both very effective at directing CDC via the classical complement-activation pathway.
- the formation of antigen-antibody complexes results in the uncloaking of multiple Clq binding sites in close proximity on the CH2 domains of participating antibody molecules such as IgG molecules (Clq is one of three subcomponents of complement Cl).
- these uncloaked Clq binding sites convert the previously low-affinity Clq-IgG interaction to one of high avidity, which triggers a cascade of events involving a series of other complement proteins and leads to the proteolytic release of the effector-cell chemotactic/activating agents C3a and C5a.
- the complement cascade ends in the formation of a membrane attack complex, which creates pores in the cell membrane that facilitate free passage of water and solutes into and out of the cell.
- Antibodies may comprise modifications in the Fc region.
- an antibody may become an inert, or non-activating, antibody.
- inertness refers to an Fc region which is at least not able to bind any Fey receptors, induce Fc-mediated cross-linking of FcRs, or induce FcR-mediated cross-linking of target antigens via two Fc regions of individual antibodies, or is not able to bind Clq.
- the inertness of an Fc region of a humanized or chimeric CD137 or PD-L1 antibody is advantageously tested using the antibody in a monospecific format.
- variants can be constructed to make the Fc region of an antibody inactive for interactions with Fey (gamma) receptors and Clq for therapeutic antibody development. Examples of such variants are described herein.
- an antibody comprises a first and a second heavy chain, wherein one or both heavy chains are modified so that the antibody induces Fc-mediated effector function to a lesser extent relative to an antibody which is identical, except for comprising non-modified first and second heavy chains.
- Said Fc-mediated effector function may be measured by determining binding to Fey receptors, binding to Clq, or induction of Fc- mediated cross-linking of FcRs.
- the heavy and light chain constant sequences have been modified so that binding of Clq to said antibody is reduced compared to an unmodified antibody by at least 70%, at least 80%, at least 90%, at least 95%, at least 97%, or 100%, wherein Clq binding is determined by ELISA.
- amino acids in the Fc region that play a dominant role in the interactions with Clq and the Fey receptors may be modified.
- amino acid positions that may be modified, e.g. in an IgG1 isotype antibody, include positions L234, and L235.
- the amino acid in at least one position corresponding to L234, and L235 may be A, and A, respectively.
- L234F and L235E amino acid substitutions can result in Fc regions with abrogated interactions with Fey receptors and Clq (Canfield et al., 1991, J. Exp. Med. (173):1483-91; Duncan et al., 1988, Nature (332):738-40).
- the amino acids in the positions corresponding to L234 and L235 may be F and E, respectively.
- a D265A amino acid substitution can decrease binding to all Fey receptors and prevent ADCC (Shields et al., 2001, J. Biol. Chem. (276):6591-604).
- the amino acid in the position corresponding to D265 may be A. Binding to C1q can be abrogated by mutating positions D270, K322, P329, and P331. Mutating these positions to either D270A or K322A or P329A or P331A can make the antibody deficient in CDC activity (Idusogie EE, et al., 2000, J Immunol. 164: 4178-84).
- the amino acids in at least one position corresponding to D270, K322, P329 and P331, may be A, A, A, and A, respectively.
- N297 may be G, Q, A or E (Leabman et al., 2013, MAbs; 5(6):896-903).
- human lgG2 and lgG4 subclasses are considered naturally compromised in their interactions with C1q and Fc gamma receptors although interactions with Fey receptors were reported (Parren et al., 1992, J. Clin Invest. 90: 1537-1546; Bruhns et al., 2009, Blood 113: 3716-3725). Mutations abrogating these residual interactions can be made in both isotypes, resulting in reduction of unwanted side-effects associated with FcR binding.
- these include L234A and G237A, and for lgG4, L235E.
- the amino acid in a position corresponding to L234 and G237 in a human lgG2 heavy chain may be A and A, respectively.
- the amino acid in a position corresponding to L235 in a human lgG4 heavy chain may be E.
- the hinge region of the antibody can also be of importance with respect to interactions with Fey receptors and complement (Brekke et al., 2006, J Immunol 177:1129-1138; Dall'Acqua WF, et al., 2006, J Immunol 177:1129-1138). Accordingly, mutations in or deletion of the hinge region can influence effector functions of an antibody.
- the antibody comprises a first and a second immunoglobulin heavy chain, wherein in at least one of said first and second immunoglobulin heavy chains one or more amino acids in the positions corresponding to positions L234, L235, D265, N297, and P331 in a human IgG1 heavy chain, are not L, L, D, N, and P, respectively.
- one or more amino acids in the position corresponding to positions L234, L235, D265, N297, and P331 in a human IgG1 heavy chain are not L, L, D, N, and P, respectively.
- the amino acid in the position corresponding to position D265 in a human IgG1 heavy chain is not D.
- the amino acid in the position corresponding to position D265 in a human IgG1 heavy chain are selected from the group consisting of: A and E.
- the amino acids in the positions corresponding to positions L234 and L235 in a human IgG1 heavy chain are not L and L, respectively.
- the amino acids in the positions corresponding to positions L234 and L235 in a human IgG1 heavy chain are F and E, respectively.
- the amino acids in the positions corresponding to positions L234 and L235 in a human IgG1 heavy chain are F and E, respectively.
- the amino acids in the positions corresponding to positions L234, L235, and D265 in a human IgG1 heavy chain are F, E, and A, respectively.
- the amino acids in the positions corresponding to positions L234, L235, and D265 in a human IgG1 heavy chain are F, E, and A, respectively.
- Antibodies according to the present invention may comprise modifications, in particular in the Fc region, increasing stability of the antibody.
- an antibody comprises a first and a second heavy chain, wherein one or both heavy chains are modified so that stability of the antibody is increased relative to an antibody which is identical, except for comprising non-modified first and second heavy chains.
- amino acid positions that may be modified, e.g. in an IgG1 isotype antibody, include positions M428, and N434.
- the amino acid in at least one position corresponding to M428, and N434 may be L, and S, respectively.
- the amino acid in positions corresponding to M428, and N434 are L, and S.
- the polypeptide chain(s) of a binding agent or antibody described herein may comprise a signal peptide.
- signal peptides are sequences, which typically exhibit a length of about 15 to 30 amino acids and are preferably located at the N-terminus of a polypeptide chain, without being limited thereto.
- Signal peptides as defined herein preferably allow the transport of the polypeptide chain(s), e.g., as encoded by RNA, into a defined cellular compartment, preferably the cell surface, the endoplasmic reticulum (ER) or the endosomal-lysosomal compartment.
- the signal peptide sequence as defined herein includes, without being limited thereto, the signal peptide sequence of an immunoglobulin, e.g., the signal peptide sequence of an immunoglobulin heavy chain variable region or the signal peptide sequence of an immunoglobulin light chain variable region, wherein the immunoglobulin may be human immunoglobulin.
- the binding agents or antibodies described herein are linked or conjugated to one or more therapeutic moieties, such as a cytokine, an immune-suppressant, an immune-stimulatory molecule and/or a radioisotope.
- therapeutic moieties such as a cytokine, an immune-suppressant, an immune-stimulatory molecule and/or a radioisotope.
- conjugates are referred to herein as “immunoconjugates” or “drug conjugates”.
- Immunoconjugates which include one or more cytotoxins are referred to as "immunotoxins”.
- the first and/or second Fc sequence is conjugated to a drug or a prodrug or contains an acceptor group for the same.
- acceptor group may e.g. be an unnatural amino acid.
- polynucleotide or “nucleic acid”, as used herein, is intended to include DNA and RNA such as genomic DNA, cDNA, mRNA, recombinantly produced and chemically synthesized molecules.
- a nucleic acid may be single-stranded or double-stranded.
- RNA includes in vitro transcribed RNA (IVT RNA) or synthetic RNA. According to the invention, a polynucleotide is preferably isolated.
- Nucleic acids may be comprised in a vector.
- vector includes any vectors known to the skilled person including plasmid vectors, cosmid vectors, phage vectors such as lambda phage, viral vectors such as retroviral, adenoviral or baculoviral vectors, or artificial chromosome vectors such as bacterial artificial chromosomes (BAC), yeast artificial chromosomes (YAC), or Pl artificial chromosomes (PAC). Said vectors include expression as well as cloning vectors.
- Expression vectors comprise plasmids as well as viral vectors and generally contain a desired coding sequence and appropriate DNA sequences necessary for the expression of the operably linked coding sequence in a particular host organism (e.g., bacteria, yeast, plant, insect, or mammal) or in in vitro expression systems.
- Cloning vectors are generally used to engineer and amplify a certain desired DNA fragment and may lack functional sequences needed for expression of the desired DNA fragments.
- the RNA encoding the binding agent e.g., antibody or bispecific or multispecific binding agent, described herein is expressed in cells of the subject treated to provide the binding agent. If a binding agent comprises more than one polypeptide chain the different polypeptide chains may be encoded by the same or different RNA molecules.
- nucleic acids described herein may be recombinant and/or isolated molecules.
- RNA relates to a nucleic acid molecule which includes ribonucleotide residues. In preferred embodiments, the RNA contains all or a majority of ribonucleotide residues.
- ribonucleotide refers to a nucleotide with a hydroxyl group at the 2'-position of a P-D-ribofuranosyl group.
- RNA encompasses without limitation, double stranded RNA, single stranded RNA, isolated RNA such as partially purified RNA, essentially pure RNA, synthetic RNA, recombinantly produced RNA, as well as modified RNA that differs from naturally occurring RNA by the addition, deletion, substitution and/or alteration of one or more nucleotides. Such alterations may refer to addition of non- nucleotide material to internal RNA nucleotides or to the end(s) of RNA. It is also contemplated herein that nucleotides in RNA may be non-standard nucleotides, such as chemically synthesized nucleotides or deoxynucleotides.
- the RNA is messenger RNA (mRNA) that relates to a RNA transcript which encodes a peptide or protein.
- mRNA messenger RNA
- mRNA generally contains a 5' untranslated region (5'-UTR), a peptide coding region and a 3' untranslated region (3'-UTR).
- the RNA is produced by in vitro transcription or chemical synthesis.
- the mRNA is produced by in vitro transcription using a DNA template where DNA refers to a nucleic acid that contains deoxyribonucleotides.
- RNA is in vitro transcribed RNA (IVT-RNA) and may be obtained by in vitro transcription of an appropriate DNA template.
- the promoter for controlling transcription can be any promoter for any RNA polymerase.
- a DNA template for in vitro transcription may be obtained by cloning of a nucleic acid, in particular cDNA, and introducing it into an appropriate vector for in vitro transcription.
- the cDNA may be obtained by reverse transcription of RNA.
- the RNA is "replicon RNA” or simply a “replicon”, in particular "self-replicating RNA” or “self-amplifying RNA”.
- the replicon or self-replicating RNA is derived from or comprises elements derived from a ssRNA virus, in particular a positive-stranded ssRNA virus such as an alphavirus.
- Alphaviruses are typical representatives of positive-stranded RNA viruses.
- Alphaviruses replicate in the cytoplasm of infected cells (for review of the alphaviral life cycle see Jose et al., Future Microbiol., 2009, vol. 4, pp. 837-856).
- the total genome length of many alphaviruses typically ranges between 11,000 and 12,000 nucleotides, and the genomic RNA typically has a 5'-cap, and a 3' poly(A) tail.
- the genome of alphaviruses encodes non-structural proteins (involved in transcription, modification and replication of viral RNA and in protein modification) and structural proteins (forming the virus particle). There are typically two open reading frames (ORFs) in the genome.
- the four non-structural proteins (nsPl-nsP4) are typically encoded together by a first ORF beginning near the 5' terminus of the genome, while alphavirus structural proteins are encoded together by a second ORF which is found downstream of the first ORF and extends near the 3' terminus of the genome.
- the first ORF is larger than the second ORF, the ratio being roughly 2:1.
- the genomic RNA In cells infected by an alphavirus, only the nucleic acid sequence encoding non-structural proteins is translated from the genomic RNA, while the genetic information encoding structural proteins is translatable from a subgenomic transcript, which is an RNA molecule that resembles eukaryotic messenger RNA (mRNA; Gould et al., 2010, Antiviral Res., vol. 87 pp. 111-124). Following infection, i.e. at early stages of the viral life cycle, the (+) stranded genomic RNA directly acts like a messenger RNA for the translation of the open reading frame encoding the non-structural poly-protein (nsP1234).
- mRNA eukaryotic messenger RNA
- Alphavirus-derived vectors have been proposed for delivery of foreign genetic information into target cells or target organisms.
- the open reading frame encoding alphaviral structural proteins is replaced by an open reading frame encoding a protein of interest.
- Alphavirus-based trans-replication systems rely on alphavirus nucleotide sequence elements on two separate nucleic acid molecules: one nucleic acid molecule encodes a viral replicase, and the other nucleic acid molecule is capable of being replicated by said replicase in trans (hence the designation trans-replication system).
- Trans-replication requires the presence of both these nucleic acid molecules in a given host cell.
- the nucleic acid molecule capable of being replicated by the replicase in trans must comprise certain alphaviral sequence elements to allow recognition and RNA synthesis by the alphaviral replicase.
- the RNA described herein may have modified nucleosides.
- the RNA comprises a modified nucleoside in place of at least one (e.g. every) uridine.
- uracil describes one of the nucleobases that can occur in the nucleic acid of RNA.
- uridine describes one of the nucleosides that can occur in RNA.
- uridine The structure of uridine is:
- UTP (uridine 5'-triphosphate) has the following structure:
- Pseudo-UTP (pseudouridine 5'-triphosphate) has the following structure:
- Pseudouridine is one example of a modified nucleoside that is an isomer of uridine, where the uracil is attached to the pentose ring via a carbon-carbon bond instead of a nitrogen- carbon glycosidic bond.
- N1-methyl-pseudouridine (m1 ⁇ ) which has the structure:
- N1-methyl-pseudo-UTP has the following structure:
- m5U 5-methyl-uridine
- one or more uridine in the RNA described herein is replaced by a modified nucleoside.
- the modified nucleoside is a modified uridine.
- RNA comprises a modified nucleoside in place of at least one uridine. In some embodiments, RNA comprises a modified nucleoside in place of each uridine.
- the modified nucleoside is independently selected from pseudouridine (ip), N1-methyl-pseudouridine (mlip), and 5-methyl-uridine (m5U).
- the modified nucleoside comprises pseudouridine ( ⁇ ).
- the modified nucleoside comprises N1-methyl-pseudouridine (m1 ⁇ ).
- the modified nucleoside comprises 5-methyl-uridine (m5U).
- RNA may comprise more than one type of modified nucleoside, and the modified nucleosides are independently selected from pseudouridine ( ⁇ ), N1-methyl-pseudouridine (mlip), and 5-methyl-uridine (m5U).
- the modified nucleosides comprise pseudouridine (ip) and Nl- methyl-pseudouridine (m1 ⁇ ). In some embodiments, the modified nucleosides comprise pseudouridine ( ⁇ ) and 5-methyl-uridine (m5U). In some embodiments, the modified nucleosides comprise N1-methyl-pseudouridine (m1 ⁇ ) and 5-methyl-uridine (m5U). In some embodiments, the modified nucleosides comprise pseudouridine ( ⁇ ), N1-methyl- pseudouridine (m1 ⁇ ), and 5-methyl-uridine (m5U).
- the modified nucleoside replacing one or more, e.g., all, uridine in the RNA may be any one or more of 3-methyl-uridine (m 3 U), 5-methoxy-uridine (mo 5 U), 5-aza- uridine, 6-aza-uridine, 2-thio-5-aza-uridine, 2-thio-uridine (s 2 U), 4-thio-uridine (s 4 U), 4-thio- pseudouridine, 2-thio-pseudouridine, 5-hydroxy-uridine (ho 5 U), 5-aminoallyl-uridine, 5-halo- uridine (e.g., 5-iodo-uridine or 5-bromo-uridine), uridine 5-oxyacetic acid (cmo 5 U), uridine 5- oxyacetic acid methyl ester (mcmo 5 U), 5-carboxymethyl-uridine (cm 5 U), 1-carboxymethyl- pseudouridine, 5-carboxyhydroxymethyl-uridine (chm 5 U), 5-carbox
- the RNA comprises other modified nucleosides or comprises further modified nucleosides, e.g., modified cytidine.
- modified cytidine in the RNA 5- methylcytidine is substituted partially or completely, preferably completely, for cytidine.
- the RNA comprises 5-methylcytidine and one or more selected from pseudouridine ( ⁇ ), N1-methyl-pseudouridine (mlip), and 5-methyl-uridine (m5U).
- the RNA comprises 5-methylcytidine and N1-methyl-pseudouridine (m1 ⁇ ).
- the RNA comprises 5-methylcytidine in place of each cytidine and N1- methyl-pseudouridine (m1 ⁇ ) in place of each uridine.
- the RNA according to the present disclosure comprises a 5'-cap.
- the RNA of the present disclosure does not have uncapped 5'-triphosphates.
- the RNA may be modified by a 5'- cap analog.
- the term "5'-cap” refers to a structure found on the 5'-end of an mRNA molecule and generally consists of a guanosine nucleotide connected to the mRNA via a 5'- to 5'-triphosphate linkage. In one embodiment, this guanosine is methylated at the 7-position.
- RNA with a 5'-cap or 5'-cap analog may be achieved by in vitro transcription, in which the 5'-cap is co-transcriptionally expressed into the RNA strand, or may be attached to RNA post-transcriptionally using capping enzymes.
- the building block cap for RNA is m 2 7 ' 3'-O Gppp (m 1 2'-O )ApG (also sometimes referred to as m 2 7 ' 3'O G(5')ppp(5')m 2'-O ApG), which has the following structure:
- Cap1 RNA which comprises RNA and m2 7 ' 3'-O G(5')ppp(5')m 2'-O ApG:
- the RNA is modified with "CapO" structures using, in one embodiment, the cap analog anti-reverse cap (ARCA Cap (m 2 7 ' 3'O G(5')ppp(5')G)) with the structure:
- CapO RNA comprising RNA and m 2 7 ' 3'O G(5')ppp(5')G:
- the "CapO" structures are generated usingthe cap analog Beta-S-ARCA (m2 7 ' 2 °G(5')ppSp(5')G) with the structure:
- CapO RNA comprising Beta-S-ARCA (m2 7 ' 2 °G(5')ppSp(5')G) and RNA:
- the "DI" diastereomer of beta-S-ARCA or "beta-S-ARCA(Dl)” is the diastereomer of beta-S- ARCA which elutes first on an HPLC column compared to the D2 diastereomer of beta-S-ARCA (beta-S-ARCA(D2)) and thus exhibits a shorter retention time (cf., WO 2011/015347, herein incorporated by reference).
- a particularly preferred cap is beta-S-ARCA(Dl) (m2 7,2'-O GppSpG) or m2 7 ’ 3'-O Gppp(m 1 2'-O )ApG.
- RNA according to the present disclosure comprises a 5'-UTR and/or a 3'-UTR.
- the term "untranslated region" or “UTR” relates to a region in a DNA molecule which is transcribed but is not translated into an amino acid sequence, or to the corresponding region in an RNA molecule, such as an mRNA molecule.
- An untranslated region (UTR) can be present 5' (upstream) of an open reading frame (5'-UTR) and/or 3' (downstream) of an open reading frame (3'-UTR).
- a 5'-UTR if present, is located at the 5' end, upstream of the start codon of a protein-encoding region.
- a 5'-UTR is downstream of the 5'-cap (if present), e.g. directly adjacent to the 5'-cap.
- a 3'-UTR if present, is located at the 3 ' end, downstream of the termination codon of a protein-encoding region, but the term "3'-UTR" does preferably not include the poly(A) sequence.
- the 3'-UTR is upstream of the poly(A) sequence (if present), e.g. directly adjacent to the poly(A) sequence.
- RNA comprises a 5'-UTR comprising the nucleotide sequence of SEQ ID NO: 199, or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 199.
- RNA comprises a 3'-UTR comprising the nucleotide sequence of SEQ ID NO: 200 or 201, or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 200 or 201.
- a particularly preferred 5'-UTR comprises the nucleotide sequence of SEQ ID NO: 199.
- a particularly preferred 3'-UTR comprises the nucleotide sequence of SEQ ID NO: 200 or 201.
- the RNA according to the present disclosure comprises a 3’-poly(A) sequence.
- poly(A) sequence or "poly-A tail” refers to an uninterrupted or interrupted sequence of adenylate residues which is typically located at the 3’-end of an RNA molecule.
- Poly(A) sequences are known to those of skill in the art and may follow the 3'-UTR in the RNAs described herein.
- An uninterrupted poly(A) sequence is characterized by consecutive adenylate residues. In nature, an uninterrupted poly(A) sequence is typical.
- RNAs disclosed herein can have a poly(A) sequence attached to the free 3'-end of the RNA by a template-independent RNA polymerase after transcription or a poly(A) sequence encoded by DNA and transcribed by a template-dependent RNA polymerase.
- a poly(A) sequence of about 120 A nucleotides has a beneficial influence on the levels of RNA in transfected eukaryotic cells, as well as on the levels of protein that is translated from an open reading frame that is present upstream (5') of the poly(A) sequence (Holtkamp et aa., 2006, Blood, vol. 108, pp. 4009-4017).
- the poly(A) sequence may be of any length.
- a poly(A) sequence comprises, essentially consists of, or consists of at least 20, at least 30, at least 40, at least 80, or at least 100 and up to 500, up to 400, up to 300, up to 200, or up to 150 A nucleotides, and, in particular, about 120 A nucleotides.
- nucleotides in the poly(A) sequence typically at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, or at least 99% by number of nucleotides in the poly(A) sequence are A nucleotides, but permits that remaining nucleotides are nucleotides other than A nucleotides, such as U nucleotides (uridylate), G nucleotides (guanylate), or C nucleotides (cytidylate).
- consists of means that all nucleotides in the poly(A) sequence, i.e., 100% by number of nucleotides in the poly(A) sequence, are A nucleotides.
- a nucleotide or “A” refers to adenylate.
- a poly(A) sequence is attached during RNA transcription, e.g., during preparation of in vitro transcribed RNA, based on a DNA template comprising repeated dT nucleotides (deoxythymidylate) in the strand complementary to the coding strand.
- the DNA sequence encoding a poly(A) sequence (coding strand) is referred to as poly(A) cassette.
- the poly(A) cassette present in the coding strand of DNA essentially consists of dA nucleotides, but is interrupted by a random sequence of the four nucleotides (dA, dC, dG, and dT). Such random sequence may be 5 to 50, 10 to 30, or 10 to 20 nucleotides in length.
- a cassette is disclosed in WO 2016/005324 Al, hereby incorporated by reference. Any poly(A) cassette disclosed in WO 2016/005324 Al may be used in the present invention.
- a poly(A) cassette that essentially consists of dA nucleotides, but is interrupted by a random sequence having an equal distribution of the four nucleotides (dA, dC, dG, dT) and having a length of e.g., 5 to 50 nucleotides shows, on DNA level, constant propagation of plasmid DNA in E. coli and is still associated, on RNA level, with the beneficial properties with respect to supporting RNA stability and translational efficiency is encompassed. Consequently, in some embodiments, the poly(A) sequence contained in an RNA molecule described herein essentially consists of A nucleotides, but is interrupted by a random sequence of the four nucleotides (A, C, G, U). Such random sequence may be 5 to 50, 10 to 30, or 10 to 20 nucleotides in length.
- no nucleotides other than A nucleotides flank a poly(A) sequence at its 3'-end, i.e., the poly(A) sequence is not masked or followed at its 3'-end by a nucleotide other than A.
- the poly(A) sequence may comprise at least 20, at least 30, at least 40, at least 80, or at least 100 and up to 500, up to 400, up to 300, up to 200, or up to 150 nucleotides. In some embodiments, the poly(A) sequence may essentially consist of at least 20, at least 30, at least 40, at least 80, or at least 100 and up to 500, up to 400, up to 300, up to 200, or up to 150 nucleotides. In some embodiments, the poly(A) sequence may consist of at least 20, at least 30, at least 40, at least 80, or at least 100 and up to 500, up to 400, up to 300, up to 200, or up to 150 nucleotides. In some embodiments, the poly(A) sequence comprises at least 100 nucleotides. In some embodiments, the poly(A) sequence comprises about 150 nucleotides. In some embodiments, the poly(A) sequence comprises about 120 nucleotides.
- RNA comprises a poly(A) sequence comprising the nucleotide sequence of SEQ ID NO: 202, or a nucleotide sequence having at least 99%, 98%, 97%, 96%, 95%, 90%, 85%, or 80% identity to the nucleotide sequence of SEQ ID NO: 202.
- a particularly preferred poly(A) sequence comprises comprises the nucleotide sequence of SEQ ID NO: 202.
- a binding agent is preferably administered as single-stranded, 5'-capped mRNA that is translated into the respective protein upon entering cells of a subject being administered the RNA.
- the RNA contains structural elements optimized for maximal efficacy of the RNA with respect to stability and translational efficiency (5'-cap, 5'-UTR, 3'-UTR, poly(A) sequence).
- beta-S-ARCA(Dl) is utilized as specific capping structure at the 5'-end of the RNA.
- m 2 7 ' 3'-O Gppp(m 1 2'-O )ApG is utilized as specific capping structure at the 5'-end of the RNA.
- the 5'-UTR sequence is derived from the human alpha-globin mRNA and optionally has an optimized 'Kozak sequence' to increase translational efficiency.
- a combination of two sequence elements derived from the "amino terminal enhancer of split" (AES) mRNA (called F) and the mitochondrial encoded 12S ribosomal RNA (called I) are placed between the coding sequence and the poly(A) sequence to assure higher maximum protein levels and prolonged persistence of the mRNA. These were identified by an ex vivo selection process for sequences that confer RNA stability and augment total protein expression (see WO 2017/060314, herein incorporated by reference).
- two re-iterated 3'-UTRs derived from the human beta-globin mRNA are placed between the coding sequence and the poly(A) sequence to assure higher maximum protein levels and prolonged persistence of the mRNA.
- a poly(A) sequence measuring 110 nucleotides in length, consisting of a stretch of 30 adenosine residues, followed by a 10 nucleotide linker sequence and another 70 adenosine residues is used. This poly(A) sequence was designed to enhance RNA stability and translational efficiency.
- RNA encoding a binding agent is expressed in cells of the subject treated to provide the binding agent. In one embodiment of all aspects of the invention, the RNA is transiently expressed in cells of the subject. In one embodiment of all aspects of the invention, the RNA is in vitro transcribed RNA. In one embodiment of all aspects of the invention, expression of the binding agent is into the extracellular space, i.e., the binding agent is secreted.
- transcription relates to a process, wherein the genetic code in a DNA sequence is transcribed into RNA. Subsequently, the RNA may be translated into peptide or protein.
- the term “transcription” comprises “in vitro transcription”, wherein the term “in vitro transcription” relates to a process wherein RNA, in particular mRNA, is in vitro synthesized in a cell-free system, preferably using appropriate cell extracts.
- cloning vectors are applied for the generation of transcripts. These cloning vectors are generally designated as transcription vectors and are according to the present invention encompassed by the term "vector”.
- the RNA used in the present invention preferably is in vitro transcribed RNA (IVT-RNA) and may be obtained by in vitro transcription of an appropriate DNA template.
- the promoter for controlling transcription can be any promoter for any RNA polymerase.
- RNA polymerases are the T7, T3, and SP6 RNA polymerases.
- the in vitro transcription according to the invention is controlled by a T7 or SP6 promoter.
- a DNA template for in vitro transcription may be obtained by cloning of a nucleic acid, in particular cDNA, and introducing it into an appropriate vector for in vitro transcription.
- the cDNA may be obtained by reverse transcription of RNA.
- RNA With respect to RNA, the term "expression” or “translation” relates to the process in the ribosomes of a cell by which a strand of mRNA directs the assembly of a sequence of amino acids to make a peptide or protein.
- the present disclosure also relates to a method for delivering RNA to a target cell in a subject comprising the administration of the RNA particles described herein to the subject.
- the RNA is delivered to the cytosol of the target cell.
- the RNA is translated by the target cell to produce the peptide or protein encoded by the RNA.
- Encoding refers to the inherent property of specific sequences of nucleotides in a polynucleotide, such as a gene, a cDNA, or an mRNA, to serve as templates for synthesis of other polymers and macromolecules in biological processes having either a defined sequence of nucleotides (i.e., rRNA, tRNA and mRNA) or a defined sequence of amino acids and the biological properties resulting therefrom.
- a gene encodes a protein if transcription and translation of mRNA corresponding to that gene produces the protein in a cell or other biological system.
- Both the coding strand the nucleotide sequence of which is identical to the mRNA sequence and is usually provided in sequence listings, and the non-coding strand, used as the template for transcription of a gene or cDNA, can be referred to as encoding the protein or other product of that gene or cDNA.
- the RNA encoding binding agent to be administered according to the invention is non-immunogenic.
- non-immunogenic RNA refers to RNA that does not induce a response by the immune system upon administration, e.g., to a mammal, or induces a weaker response than would have been induced by the same RNA that differs only in that it has not been subjected to the modifications and treatments that render the non-immunogenic RNA non-immunogenic, i.e., than would have been induced by standard RNA (stdRNA).
- stdRNA standard RNA
- non-immunogenic RNA which is also termed modified RNA (modRNA) herein, is rendered non-immunogenic by incorporating modified nucleosides suppressing RNA-mediated activation of innate immune receptors into the RNA and removing double-stranded RNA (dsRNA).
- modified RNA dsRNA
- any modified nucleoside may be used as long as it lowers or suppresses immunogenicity of the RNA.
- Particularly preferred are modified nucleosides that suppress RNA-mediated activation of innate immune receptors.
- the modified nucleosides comprises a replacement of one or more uridines with a nucleoside comprising a modified nucleobase.
- the modified nucleobase is a modified uracil.
- the nucleoside comprising a modified nucleobase is selected from the group consisting of 3-methyl-uridine (m 3 U), 5-methoxy-uridine (mo 5 U), 5-aza-uridine, 6-aza-uridine, 2-thio-5-aza-uridine, 2-thio-uridine (s 2 U), 4-thio-uridine (s 4 U), 4-thio-pseudouridine, 2-thio- pseudouridine, 5-hydroxy-uridine (ho 5 U), 5-aminoallyl-uridine, 5-halo-uridine (e.g., 5-iodo- uridine or 5-bromo-uridine), uridine 5-oxyacetic acid (cmo 5 U), uridine 5-oxyacetic acid methyl ester (mcmo 5 U), 5-carboxymethyl-uridine (cm 5 U), 1-carboxymethyl-pseudouridine, 5- carboxyhydroxymethyl-uridine (chm 5 U), 5-carboxyhydroxymethyl-uridine methyl ester (
- the nucleoside comprising a modified nucleobase is pseudouridine ( ⁇ ), N1-methyl-pseudouridine (m1 ⁇ ) or 5-methyl-uridine (m5U), in particular N1-methyl-pseudouridine.
- the replacement of one or more uridines with a nucleoside comprising a modified nucleobase comprises a replacement of at least 1%, at least 2%, at least 3%, at least 4%, at least 5%, at least 10%, at least 25%, at least 50%, at least 75%, at least 90%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% of the uridines.
- dsRNA double-stranded RNA
- IVT in vitro transcription
- dsRNA double-stranded RNA
- dsRNA induces inflammatory cytokines and activates effector enzymes leading to protein synthesis inhibition.
- dsRNA can be removed from RNA such as IVT RNA, for example, by ion-pair reversed phase HPLC using a non-porous or porous C-18 polystyrene-divinylbenzene (PS-DVB) matrix.
- PS-DVB polystyrene-divinylbenzene
- E enzymatic based method using E.
- dsRNA can be separated from ssRNA by using a cellulose material.
- an RNA preparation is contacted with a cellulose material and the ssRNA is separated from the cellulose material under conditions which allow binding of dsRNA to the cellulose material and do not allow binding of ssRNA to the cellulose material.
- remove or “removal” refers to the characteristic of a population of first substances, such as non-immunogenic RNA, being separated from the proximity of a population of second substances, such as dsRNA, wherein the population of first substances is not necessarily devoid of the second substance, and the population of second substances is not necessarily devoid of the first substance.
- a population of first substances characterized by the removal of a population of second substances has a measurably lower content of second substances as compared to the non-separated mixture of first and second substances.
- the removal of dsRNA from non-immunogenic RNA comprises a removal of dsRNA such that less than 10%, less than 5%, less than 4%, less than 3%, less than 2%, less than 1%, less than 0.5%, less than 0.3%, or less than 0.1% of the RNA in the non-immunogenic RNA composition is dsRNA.
- the non-immunogenic RNA is free or essentially free of dsRNA.
- the non-immunogenic RNA composition comprises a purified preparation of single-stranded nucleoside modified RNA.
- the purified preparation of single-stranded nucleoside modified RNA is substantially free of double stranded RNA (dsRNA).
- the purified preparation is at least 90%, at least 91%, at least 92%, at least 93 %, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99%, at least 99.5%, or at least 99.9% single stranded nucleoside modified RNA, relative to all other nucleic acid molecules (DNA, dsRNA, etc.).
- the non-immunogenic RNA is translated in a cell more efficiently than standard RNA with the same sequence.
- translation is enhanced by a factor of 2-fold relative to its unmodified counterpart.
- translation is enhanced by a 3-fold factor.
- translation is enhanced by a 4-fold factor.
- translation is enhanced by a 5-fold factor.
- translation is enhanced by a 6-fold factor.
- translation is enhanced by a 7-fold factor.
- translation is enhanced by an 8-fold factor.
- translation is enhanced by a 9-fold factor.
- translation is enhanced by a 10-fold factor.
- translation is enhanced by a 15-fold factor.
- translation is enhanced by a 20-fold factor. In one embodiment, translation is enhanced by a 50-fold factor. In one embodiment, translation is enhanced by a 100-fold factor. In one embodiment, translation is enhanced by a 200-fold factor. In one embodiment, translation is enhanced by a 500-fold factor. In one embodiment, translation is enhanced by a 1000-fold factor. In one embodiment, translation is enhanced by a 2000-fold factor. In one embodiment, the factor is 10-1000-fold. In one embodiment, the factor is 10-100-fold. In one embodiment, the factor is 10-200-fold. In one embodiment, the factor is 10-300-fold. In one embodiment, the factor is 10-500-fold. In one embodiment, the factor is 20-1000-fold. In one embodiment, the factor is 30-1000-fold. In one embodiment, the factor is 50-1000-fold. In one embodiment, the factor is 100-1000-fold. In one embodiment, the factor is 200-1000-fold. In one embodiment, translation is enhanced by any other significant amount or range of amounts.
- the non-immunogenic RNA exhibits significantly less innate immunogenicity than standard RNA with the same sequence. In one embodiment, the non- immunogenic RNA exhibits an innate immune response that is 2-fold less than its unmodified counterpart. In one embodiment, innate immunogenicity is reduced by a 3-fold factor. In one embodiment, innate immunogenicity is reduced by a 4-fold factor. In one embodiment, innate immunogenicity is reduced by a 5-fold factor. In one embodiment, innate immunogenicity is reduced by a 6-fold factor. In one embodiment, innate immunogenicity is reduced by a 7-fold factor. In one embodiment, innate immunogenicity is reduced by a 8-fold factor. In one embodiment, innate immunogenicity is reduced by a 9-fold factor.
- innate immunogenicity is reduced by a 10-fold factor. In one embodiment, innate immunogenicity is reduced by a 15-fold factor. In one embodiment, innate immunogenicity is reduced by a 20- fold factor. In one embodiment, innate immunogenicity is reduced by a 50-fold factor. In one embodiment, innate immunogenicity is reduced by a 100-fold factor. In one embodiment, innate immunogenicity is reduced by a 200-fold factor. In one embodiment, innate immunogenicity is reduced by a 500-fold factor. In one embodiment, innate immunogenicity is reduced by a 1000-fold factor. In one embodiment, innate immunogenicity is reduced by a 2000-fold factor.
- the term "exhibits significantly less innate immunogenicity" refers to a detectable decrease in innate immunogenicity.
- the term refers to a decrease such that an effective amount of the non-immunogenic RNA can be administered without triggering a detectable innate immune response.
- the term refers to a decrease such that the non-immunogenic RNA can be repeatedly administered without eliciting an innate immune response sufficient to detectably reduce production of the protein encoded by the non-immunogenic RNA.
- the decrease is such that the non-immunogenic RNA can be repeatedly administered without eliciting an innate immune response sufficient to eliminate detectable production of the protein encoded by the non-immunogenic RNA.
- Immunogenicity is the ability of a foreign substance, such as RNA, to provoke an immune response in the body of a human or other animal.
- the innate immune system is the component of the immune system that is relatively unspecific and immediate. It is one of two main components of the vertebrate immune system, along with the adaptive immune system.
- endogenous refers to any material from or produced inside an organism, cell, tissue or system.
- exogenous refers to any material introduced from or produced outside an organism, cell, tissue or system.
- expression is defined as the transcription and/or translation of a particular nucleotide sequence.
- Codon-optimization I Increase in G/C content
- the amino acid sequence of a binding agent described herein is encoded by a coding sequence which is codon-optimized and/or the G/C content of which is increased compared to wild type coding sequence.
- a coding sequence which is codon-optimized and/or the G/C content of which is increased compared to wild type coding sequence.
- This also includes embodiments, wherein one or more sequence regions of the coding sequence are codon-optimized and/or increased in the G/C content compared to the corresponding sequence regions of the wild type coding sequence.
- the codon-optimization and/or the increase in the G/C content preferably does not change the sequence of the encoded amino acid sequence.
- coding regions are preferably codon-optimized for optimal expression in a subject to be treated using the RNA molecules described herein. Codon-optimization is based on the finding that the translation efficiency is also determined by a different frequency in the occurrence of tRNAs in cells. Thus, the sequence of RNA may be modified such that codons for which frequently occurring tRNAs are available are inserted in place of "rare codons".
- the guanosine/cytosine (G/C) content of the coding region of the RNA described herein is increased compared to the G/C content of the corresponding coding sequence of the wild type RNA, wherein the amino acid sequence encoded by the RNA is preferably not modified compared to the amino acid sequence encoded by the wild type RNA.
- This modification of the RNA sequence is based on the fact that the sequence of any RNA region to be translated is important for efficient translation of that mRNA. Sequences having an increased G (guanosine)/C (cytosine) content are more stable than sequences having an increased A (adenosine)/U (uracil) content.
- codons which contain A and/or U nucleotides can be modified by substituting these codons by other codons, which code for the same amino acids but contain no A and/or U or contain a lower content of A and/or U nucleotides.
- the G/C content of the coding region of the RNA described herein is increased by at least 10%, at least 20%, at least 30%, at least 40%, at least 50%, at least 55%, or even more compared to the G/C content of the coding region of the wild type RNA.
- Nucleic acids described herein such as RNA encoding a binding agent may be administered formulated as particles.
- the term “particle” relates to a structured entity formed by molecules or molecule complexes.
- the term “particle” relates to a micro- or nano-sized structure, such as a micro- or nano-sized compact structure dispersed in a medium.
- a particle is a nucleic acid containing particle such as a particle comprising DNA, RNA or a mixture thereof.
- a nucleic acid particle is a nanoparticle.
- nanoparticle refers to a particle having an average diameter suitable for parenteral administration.
- a “nucleic acid particle” can be used to deliver nucleic acid to a target site of interest (e.g., cell, tissue, organ, and the like).
- a nucleic acid particle may be formed from at least one cationic or cationically ionizable lipid or lipid-like material, at least one cationic polymer such as protamine, or a mixture thereof and nucleic acid.
- Nucleic acid particles include lipid nanoparticle (LNP)-based and lipoplex (LPX)-based formulations.
- the cationic or cationically ionizable lipid or lipid-like material and/or the cationic polymer combine together with the nucleic acid to form aggregates, and this aggregation results in colloidally stable particles.
- particles described herein further comprise at least one lipid or lipid-like material other than a cationic or cationically ionizable lipid or lipid-like material, at least one polymer other than a cationic polymer, or a mixture thereof
- nucleic acid particles comprise more than one type of nucleic acid molecules, where the molecular parameters of the nucleic acid molecules may be similar or different from each other, like with respect to molar mass or fundamental structural elements such as molecular architecture, capping, coding regions or other features,
- Nucleic acid particles described herein may have an average diameterthat in one embodiment ranges from about 30 nm to about 1000 nm, from about 50 nm to about 800 nm, from about 70 nm to about 600 nm, from about 90 nm to about 400 nm, or from about 100 nm to about 300 nm.
- Nucleic acid particles described herein may exhibit a polydispersity index less than about 0.5, less than about 0.4, less than about 0.3, or about 0.2 or less.
- the nucleic acid particles can exhibit a polydispersity index in a range of about 0.1 to about 0.3 or about 0.2 to about 0.3.
- the N/P ratio gives the ratio of the nitrogen groups in the lipid to the number of phosphate groups in the RNA. It is correlated to the charge ratio, as the nitrogen atoms (depending on the pH) are usually positively charged and the phosphate groups are negatively charged.
- the N/P ratio where a charge equilibrium exists, depends on the pH. Lipid formulations are frequently formed at N/P ratios larger than four up to twelve, because positively charged nanoparticles are considered favorable for transfection. In that case, RNA is considered to be completely bound to nanoparticles.
- Nucleic acid particles described herein can be prepared using a wide range of methods that may involve obtaining a colloid from at least one cationic or cationically ionizable lipid or lipid- like material and/or at least one cationic polymer and mixing the colloid with nucleic acid to obtain nucleic acid particles.
- colloids as used herein relates to a type of homogeneous mixture in which dispersed particles do not settle out.
- the insoluble particles in the mixture are microscopic, with particle sizes between 1 and 1000 nanometers.
- the mixture may be termed a colloid or a colloidal suspension.
- the term “colloid” only refers to the particles in the mixture and not the entire suspension.
- colloids comprising at least one cationic or cationically ionizable lipid or lipid-like material and/or at least one cationic polymer methods are applicable herein that are conventionally used for preparing liposomal vesicles and are appropriately adapted.
- lipids are firstly dissolved in a suitable organic solvent, and dried down to yield a thin film at the bottom of the flask.
- the obtained lipid film is hydrated using an appropriate aqueous medium to produce a liposomal dispersion.
- an additional downsizing step may be included.
- Reverse phase evaporation is an alternative method to the film hydration for preparing liposomal vesicles that involves formation of a water-in-oil emulsion between an aqueous phase and an organic phase containing lipids. A brief sonication of this mixture is required for system homogenization. The removal of the organic phase under reduced pressure yields a milky gel that turns subsequently into a liposomal suspension.
- ethanol injection technique refers to a process, in which an ethanol solution comprising lipids is rapidly injected into an aqueous solution through a needle. This action disperses the lipids throughout the solution and promotes lipid structure formation, for example lipid vesicle formation such as liposome formation.
- the RNA lipoplex particles described herein are obtainable by adding RNA to a colloidal liposome dispersion. Using the ethanol injection technique, such colloidal liposome dispersion is, in one embodiment, formed as follows: an ethanol solution comprising lipids, such as cationic lipids and additional lipids, is injected into an aqueous solution under stirring.
- the RNA lipoplex particles described herein are obtainable without a step of extrusion.
- extruding refers to the creation of particles having a fixed, cross- sectional profile. In particular, it refers to the downsizing of a particle, whereby the particle is forced through filters with defined pores.
- Other methods having organic solvent free characteristics may also be used according to the present disclosure for preparing a colloid.
- LNPs typically comprise four components: ionizable cationic lipids, neutral lipids such as phospholipids, a steroid such as cholesterol, and a polymer conjugated lipid such as polyethylene glycol (PEG)-lipids. Each component is responsible for payload protection, and enables effective intracellular delivery.
- LNPs may be prepared by mixing lipids dissolved in ethanol rapidly with nucleic acid in an aqueous buffer.
- average diameter refers to the mean hydrodynamic diameter of particles as measured by dynamic laser light scattering (DLS) with data analysis using the so-called cumulant algorithm, which provides as results the so-called Zaverage with the dimension of a length, and the polydispersity index (PI), which is dimensionless (Koppel, D., J. Chem. Phys. 57, 1972, pp 4814-4820, ISO 13321).
- PI polydispersity index
- the "polydispersity index” is preferably calculated based on dynamic light scattering measurements by the so-called cumulant analysis as mentioned in the definition of the "average diameter". Under certain prerequisites, it can be taken as a measure of the size distribution of an ensemble of nanoparticles.
- nucleic acid containing particles have been described previously to be suitable for delivery of nucleic acid in particulate form (e.g. Kaczmarek, J. C. et al., 2017, Genome Medicine 9, 60).
- nanoparticle encapsulation of nucleic acid physically protects nucleic acid from degradation and, depending on the specific chemistry, can aid in cellular uptake and endosomal escape.
- the present disclosure describes particles comprising nucleic acid, at least one cationic or cationically ionizable lipid or lipid-like material, and/or at least one cationic polymer which associate with nucleic acid to form nucleic acid particles and compositions comprising such particles.
- the nucleic acid particles may comprise nucleic acid which is complexed in different forms by non-covalent interactions to the particle.
- the particles described herein are not viral particles, in particular infectious viral particles, i.e., they are not able to virally infect cells.
- Suitable cationic or cationically ionizable lipids or lipid-like materials and cationic polymers are those that form nucleic acid particles and are included by the term "particle forming components" or “particle forming agents".
- the term “particle forming components” or “particle forming agents” relates to any components which associate with nucleic acid to form nucleic acid particles. Such components include any component which can be part of nucleic acid particles.
- polymers are commonly used materials for nanoparticle-based delivery.
- cationic polymers are used to electrostatically condense the negatively charged nucleic acid into nanoparticles.
- These positively charged groups often consist of amines that change their state of protonation in the pH range between 5.5 and 7.5, thought to lead to an ion imbalance that results in endosomal rupture.
- Polymers such as poly-L-lysine, polyamidoamine, protamine and polyethyleneimine, as well as naturally occurring polymers such as chitosan have all been applied to nucleic acid delivery and are suitable as cationic polymers herein.
- some investigators have synthesized polymers specifically for nucleic acid delivery. Poly( ⁇ -amino esters), in particular, have gained widespread use in nucleic acid delivery owing to their ease of synthesis and biodegradability.
- Such synthetic polymers are also suitable as cationic polymers herein.
- a "polymer,” as used herein, is given its ordinary meaning, i.e., a molecular structure comprising one or more repeat units (monomers), connected by covalent bonds.
- the repeat units can all be identical, or in some cases, there can be more than one type of repeat unit present within the polymer.
- the polymer is biologically derived, i.e., a biopolymer such as a protein.
- additional moieties can also be present in the polymer, for example targeting moieties such as those described herein. If more than one type of repeat unit is present within the polymer, then the polymer is said to be a "copolymer.” It is to be understood that the polymer being employed herein can be a copolymer.
- the repeat units forming the copolymer can be arranged in any fashion.
- the repeat units can be arranged in a random order, in an alternating order, or as a "block" copolymer, i.e., comprising one or more regions each comprising a first repeat unit (e.g., a first block), and one or more regions each comprising a second repeat unit (e.g., a second block), etc.
- Block copolymers can have two (a diblock copolymer), three (a triblock copolymer), or more numbers of distinct blocks.
- the polymer is biocompatible.
- Biocompatible polymers are polymers that typically do not result in significant cell death at moderate concentrations.
- the biocompatible polymer is biodegradable, i.e., the polymer is able to degrade, chemically and/or biologically, within a physiological environment, such as within the body.
- polymer may be protamine or polyalkyleneimine, in particular protamine.
- protamine refers to any of various strongly basic proteins of relatively low molecular weight that are rich in arginine and are found associated especially with DNA in place of somatic histones in the sperm cells of various animals (as fish).
- protamine refers to proteins found in fish sperm that are strongly basic, are soluble in water, are not coagulated by heat, and yield chiefly arginine upon hydrolysis. In purified form, they are used in a long-acting formulation of insulin and to neutralize the anticoagulant effects of heparin.
- the term "protamine” as used herein is meant to comprise any protamine amino acid sequence obtained or derived from natural or biological sources including fragments thereof and multimeric forms of said amino acid sequence or fragment thereof as well as (synthesized) polypeptides which are artificial and specifically designed for specific purposes and cannot be isolated from native or biological sources.
- the polyalkyleneimine comprises polyethylenimine and/or polypropylenimine, preferably polyethyleneimine.
- a preferred polyalkyleneimine is polyethyleneimine (PEI).
- the average molecular weight of PEI is preferably 0.75-10 2 to 10 7 Da, preferably 1000 to 10 5 Da, more preferably 10000 to 40000 Da, more preferably 15000 to 30000 Da, even more preferably 20000 to 25000 Da.
- linear polyalkyleneimine such as linear polyethyleneimine (PEI).
- Cationic polymers contemplated for use herein include any cationic polymers which are able to electrostatically bind nucleic acid.
- cationic polymers contemplated for use herein include any cationic polymers with which nucleic acid can be associated, e.g. by forming complexes with the nucleic acid or forming vesicles in which the nucleic acid is enclosed or encapsulated.
- Particles described herein may also comprise polymers other than cationic polymers, i.e., non- cationic polymers and/or anionic polymers. Collectively, anionic and neutral polymers are referred to herein as non-cationic polymers.
- Lipid and lipid-like material Lipid and lipid-like material
- lipid and "lipid-like material” are broadly defined herein as molecules which comprise one or more hydrophobic moieties or groups and optionally also one or more hydrophilic moieties or groups. Molecules comprising hydrophobic moieties and hydrophilic moieties are also frequently denoted as amphiphiles. Lipids are usually poorly soluble in water. In an aqueous environment, the amphiphilic nature allows the molecules to self- assemble into organized structures and different phases. One of those phases consists of lipid bilayers, as they are present in vesicles, multilamellar/unilamellar liposomes, or membranes in an aqueous environment.
- Hydrophobicity can be conferred by the inclusion of apolar groups that include, but are not limited to, long-chain saturated and unsaturated aliphatic hydrocarbon groups and such groups substituted by one or more aromatic, cycloaliphatic, or heterocyclic group(s).
- the hydrophilic groups may comprise polar and/or charged groups and include carbohydrates, phosphate, carboxylic, sulfate, amino, sulfhydryl, nitro, hydroxyl, and other like groups.
- amphiphilic refers to a molecule having both a polar portion and a non-polar portion. Often, an amphiphilic compound has a polar head attached to a long hydrophobic tail. In some embodiments, the polar portion is soluble in water, while the non- polar portion is insoluble in water. In addition, the polar portion may have either a formal positive charge, or a formal negative charge. Alternatively, the polar portion may have both a formal positive and a negative charge, and be a zwitterion or inner salt.
- the amphiphilic compound can be, but is not limited to, one or a plurality of natural or non-natural lipids and lipid-like compounds.
- lipid-like material lipid-like compound or “lipid-like molecule” relates to substances that structurally and/or functionally relate to lipids but may not be considered as lipids in a strict sense.
- the term includes compounds that are able to form amphiphilic layers as they are present in vesicles, multilamellar/unilamellar liposomes, or membranes in an aqueous environment and includes surfactants, or synthesized compounds with both hydrophilic and hydrophobic moieties.
- the term refers to molecules, which comprise hydrophilic and hydrophobic moieties with different structural organization, which may or may not be similar to that of lipids.
- the term “lipid” is to be construed to cover both lipids and lipid-like materials unless otherwise indicated herein or clearly contradicted by context.
- amphiphilic compounds that may be included in an amphiphilic layer include, but are not limited to, phospholipids, aminolipids and sphingolipids.
- the amphiphilic compound is a lipid.
- lipid refers to a group of organic compounds that are characterized by being insoluble in water, but soluble in many organic solvents. Generally, lipids may be divided into eight categories: fatty acids, glycerolipids, glycerophospholipids, sphingolipids, saccharolipids, polyketides (derived from condensation of ketoacyl subunits), sterol lipids and prenol lipids (derived from condensation of isoprene subunits). Although the term “lipid” is sometimes used as a synonym for fats, fats are a subgroup of lipids called triglycerides. Lipids also encompass molecules such as fatty acids and their derivatives (including tri-, di-, monoglycerides, and phospholipids), as well as sterol-containing metabolites such as cholesterol.
- Fatty acids, or fatty acid residues are a diverse group of molecules made of a hydrocarbon chain that terminates with a carboxylic acid group; this arrangement confers the molecule with a polar, hydrophilic end, and a nonpolar, hydrophobic end that is insoluble in water.
- the carbon chain typically between four and 24 carbons long, may be saturated or unsaturated, and may be attached to functional groups containing oxygen, halogens, nitrogen, and sulfur. If a fatty acid contains a double bond, there is the possibility of either a cis or trans geometric isomerism, which significantly affects the molecule's configuration. Cis-double bonds cause the fatty acid chain to bend, an effect that is compounded with more double bonds in the chain.
- Glycerolipids are composed of mono-, di-, and tri-substituted glycerols, the best-known being the fatty acid triesters of glycerol, called triglycerides.
- triacylglycerol is sometimes used synonymously with "triglyceride”.
- the three hydroxyl groups of glycerol are each esterified, typically by different fatty acids.
- Additional subclasses of glycerolipids are represented by glycosylglycerols, which are characterized by the presence of one or more sugar residues attached to glycerol via a glycosidic linkage.
- the glycerophospholipids are amphipathic molecules (containing both hydrophobic and hydrophilic regions) that contain a glycerol core linked to two fatty acid-derived "tails" by ester linkages and to one "head” group by a phosphate ester linkage.
- Examples of glycerophospholipids usually referred to as phospholipids (though sphingomyelins are also classified as phospholipids) are phosphatidylcholine (also known as PC, GPCho or lecithin), phosphatidylethanolamine (PE or GPEtn) and phosphatidylserine (PS or GPSer).
- Sphingolipids are a complex family of compounds that share a common structural feature, a sphingoid base backbone.
- the major sphingoid base in mammals is commonly referred to as sphingosine.
- Ceramides N-acyl-sphingoid bases
- the fatty acids are typically saturated or mono- unsaturated with chain lengths from 16 to 26 carbon atoms.
- the major phosphosphingolipids of mammals are sphingomyelins (ceramide phosphocholines), whereas insects contain mainly ceramide phosphoethanolamines and fungi have phytoceramide phosphoinositols and mannose-containing headgroups.
- glycosphingolipids are a diverse family of molecules composed of one or more sugar residues linked via a glycosidic bond to the sphingoid base. Examples of these are the simple and complex glycosphingolipids such as cerebrosides and gangliosides.
- Sterol lipids such as cholesterol and its derivatives, or tocopherol and its derivatives, are an important component of membrane lipids, along with the glycerophospholipids and sphingomyelins.
- Saccharolipids describe compounds in which fatty acids are linked directly to a sugar backbone, forming structures that are compatible with membrane bilayers.
- a monosaccharide substitutes for the glycerol backbone present in glycerolipids and glycerophospholipids.
- the most familiar saccharolipids are the acylated glucosamine precursors of the Lipid A component of the lipopolysaccharides in Gram-negative bacteria.
- Typical lipid A molecules are disaccharides of glucosamine, which are derivatized with as many as seven fatty-acyl chains. The minimal lipopolysaccharide required for growth in E.
- Kdo2-Lipid A a hexa-acylated disaccharide of glucosamine that is glycosylated with two 3-deoxy-D-manno-octulosonic acid (Kdo) residues.
- Polyketides are synthesized by polymerization of acetyl and propionyl subunits by classic enzymes as well as iterative and multimodular enzymes that share mechanistic features with the fatty acid synthases. They comprise a large number of secondary metabolites and natural products from animal, plant, bacterial, fungal and marine sources, and have great structural diversity. Many polyketides are cyclic molecules whose backbones are often further modified by glycosylation, methylation, hydroxylation, oxidation, or other processes.
- lipids and lipid-like materials may be cationic, anionic or neutral.
- Neutral lipids or lipid-like materials exist in an uncharged or neutral zwitterionic form at a selected pH.
- the nucleic acid particles described herein may comprise at least one cationic or cationically ionizable lipid or lipid-like material as particle forming agent.
- Cationic or cationically ionizable lipids or lipid-like materials contemplated for use herein include any cationic or cationically ionizable lipids or lipid-like materials which are able to electrostatically bind nucleic acid.
- cationic or cationically ionizable lipids or lipid-like materials contemplated for use herein can be associated with nucleic acid, e.g. by forming complexes with the nucleic acid or forming vesicles in which the nucleic acid is enclosed or encapsulated.
- a "cationic lipid” or “cationic lipid-like material” refers to a lipid or lipid-like material having a net positive charge. Cationic lipids or lipid-like materials bind negatively charged nucleic acid by electrostatic interaction. Generally, cationic lipids possess a lipophilic moiety, such as a sterol, an acyl chain, a diacyl or more acyl chains, and the head group of the lipid typically carries the positive charge.
- a cationic lipid or lipid-like material has a net positive charge only at certain pH, in particular acidic pH, while it has preferably no net positive charge, preferably has no charge, i.e., it is neutral, at a different, preferably higher pH such as physiological pH.
- This ionizable behavior is thought to enhance efficacy through helping with endosomal escape and reducing toxicity as compared with particles that remain cationic at physiological pH.
- cationic or cationically ionizable lipid or lipid-like materials are comprised by the term “cationic lipid or lipid-like material” unless contradicted by the circumstances.
- the cationic or cationically ionizable lipid or lipid-like material comprises a head group which includes at least one nitrogen atom (N) which is positive charged or capable of being protonated.
- cationic lipids include, but are not limited to l,2-dioleoyl-3-trimethylammonium propane (DOTAP); N,N-dimethyl-2,3-dioleyloxypropylamine (DODMA), 1,2-di-O-octadecenyl- 3-trimethylammonium propane (DOTMA), 3-(N— (N',N'-dimethylaminoethane)- carbamoyl)cholesterol (DC-Chol), dimethyldioctadecylammonium (DDAB); l,2-dioleoyl-3- dimethylammonium-propane (DODAP); l,2-diacyloxy-3-dimethylammonium propanes; 1,2- dialkyloxy-3-dimethylammonium propanes; dioctadecyldimethyl ammonium chloride (DODAC), 1,2-distearyloxy-N,N-dimethyl-3-aminopropy
- the cationic lipid may comprise from about 10 mol % to about 100 mol %, about 20 mol % to about 100 mol %, about 30 mol % to about 100 mol %, about 40 mol % to about 100 mol %, or about 50 mol % to about 100 mol % of the total lipid present in the particle. Additional lipids or lipid-like materials
- Particles described herein may also comprise lipids or lipid-like materials other than cationic or cationically ionizable lipids or lipid-like materials, i.e., non-cationic lipids or lipid-like materials (including non-cationically ionizable lipids or lipid-like materials).
- anionic and neutral lipids or lipid-like materials are referred to herein as non-cationic lipids or lipid-like materials.
- Optimizing the formulation of nucleic acid particles by addition of other hydrophobic moieties, such as cholesterol and lipids, in addition to an ionizable/cationic lipid or lipid-like material may enhance particle stability and efficacy of nucleic acid delivery.
- an additional lipid or lipid-like material may be incorporated which may or may not affect the overall charge of the nucleic acid particles.
- the additional lipid or lipid-like material is a non-cationic lipid or lipid-like material.
- the non-cationic lipid may comprise, e.g., one or more anionic lipids and/or neutral lipids.
- an "anionic lipid” refers to any lipid that is negatively charged at a selected pH.
- a neutral lipid refers to any of a number of lipid species that exist either in an uncharged or neutral zwitterionic form at a selected pH.
- the additional lipid comprises one of the following neutral lipid components: (1) a phospholipid, (2) cholesterol or a derivative thereof; or (3) a mixture of a phospholipid and cholesterol or a derivative thereof.
- cholesterol derivatives include, but are not limited to, cholestanol, cholestanone, cholestenone, coprostanol, cholesteryl-2'-hydroxyethyl ether, cholesteryl-4'- hydroxybutyl ether, tocopherol and derivatives thereof, and mixtures thereof.
- Specific phospholipids that can be used include, but are not limited to, phosphatidylcholines, phosphatidylethanolamines, phosphatidylglycerols, phosphatidic acids, phosphatidylserines or sphingomyelin.
- Such phospholipids include in particular diacylphosphatidylcholines, such as distearoylphosphatidylcholine (DSPC), dioleoylphosphatidylcholine (DOPC), dimyristoylphosphatidylcholine (DMPC), dipentadecanoylphosphatidylcholine, dilauroylphosphatidylcholine, dipalmitoylphosphatidylcholine (DPPC), diarachidoylphosphatidylcholine (DAPC), dibehenoylphosphatidylcholine (DBPC), ditricosanoylphosphatidylcholine (DTPC), dilignoceroylphatidylcholine (DLPC), palmitoyloleoyl-phosphatidylcholine (POPC), l,2-di-O-octadecenyl-sn-glycero-3- phosphocholine (18:0 Diether PC), l-o
- the nucleic acid particles include both a cationic lipid and an additional lipid.
- particles described herein include a polymer conjugated lipid such as a pegylated lipid.
- a polymer conjugated lipid such as a pegylated lipid.
- pegylated lipid refers to a molecule comprising both a lipid portion and a polyethylene glycol portion. Pegylated lipids are known in the art.
- the amount of the at least one cationic lipid compared to the amount of the at least one additional lipid may affect important nucleic acid particle characteristics, such as charge, particle size, stability, tissue selectivity, and bioactivity of the nucleic acid. Accordingly, in some embodiments, the molar ratio of the at least one cationic lipid to the at least one additional lipid is from about 10:0 to about 1:9, about 4:1 to about 1:2, or about 3:1 to about 1:1.
- the non-cationic lipid, in particular neutral lipid, may comprise from about 0 mol % to about 90 mol %, from about 0 mol % to about 80 mol %, from about 0 mol % to about 70 mol %, from about 0 mol % to about 60 mol %, or from about 0 mol % to about 50 mol %, of the total lipid present in the particle.
- Lipoplex Particles e.g., one or more phospholipids and/or cholesterol
- RNA described herein may be present in RNA lipoplex particles.
- RNA lipoplex particle relates to a particle that contains lipid, in particular cationic lipid, and RNA. Electrostatic interactions between positively charged liposomes and negatively charged RNA results in complexation and spontaneous formation of RNA lipoplex particles. Positively charged liposomes may be generally synthesized using a cationic lipid, such as DOTMA, and additional lipids, such as DOPE. In one embodiment, a RNA lipoplex particle is a nanoparticle.
- the RNA lipoplex particles include both a cationic lipid and an additional lipid.
- the cationic lipid is DOTMA and the additional lipid is DOPE.
- the molar ratio of the at least one cationic lipid to the at least one additional lipid is from about 10:0 to about 1:9, about 4:1 to about 1:2, or about 3:1 to about 1:1. In specific embodiments, the molar ratio may be about 3:1, about 2.75:1, about 2.5:1, about 2.25:1, about 2:1, about 1.75:1, about 1.5:1, about 1.25:1, or about 1:1. In an exemplary embodiment, the molar ratio of the at least one cationic lipid to the at least one additional lipid is about 2:1.
- RNA lipoplex particles described herein have an average diameter that in one embodiment ranges from about 200 nm to about 1000 nm, from about 200 nm to about 800 nm, from about 250 to about 700 nm, from about 400 to about 600 nm, from about 300 nm to about 500 nm, or from about 350 nm to about 400 nm.
- the RNA lipoplex particles have an average diameter of about 200 nm, about 225 nm, about 250 nm, about 275 nm, about 300 nm, about 325 nm, about 350 nm, about 375 nm, about 400 nm, about 425 nm, about 450 nm, about 475 nm, about 500 nm, about 525 nm, about 550 nm, about 575 nm, about 600 nm, about 625 nm, about 650 nm, about 700 nm, about 725 nm, about 750 nm, about 775 nm, about 800 nm, about 825 nm, about 850 nm, about 875 nm, about 900 nm, about 925 nm, about 950 nm, about 975 nm, or about 1000 nm.
- the RNA lipoplex particles have an average diameter that ranges from about 250 nm to about 700 nm. In another embodiment, the RNA lipoplex particles have an average diameter that ranges from about 300 nm to about 500 nm. In an exemplary embodiment, the RNA lipoplex particles have an average diameter of about 400 nm.
- RNA lipoplex particles and compositions comprising RNA lipoplex particles described herein are useful for delivery of RNA to a target tissue after parenteral administration, in particular after intravenous administration.
- the RNA lipoplex particles may be prepared using liposomes that may be obtained by injecting a solution of the lipids in ethanol into water or a suitable aqueous phase.
- the aqueous phase has an acidic pH.
- the aqueous phase comprises acetic acid, e.g., in an amount of about 5 mM.
- Liposomes may be used for preparing RNA lipoplex particles by mixing the liposomes with RNA.
- the liposomes and RNA lipoplex particles comprise at least one cationic lipid and at least one additional lipid.
- the at least one cationic lipid comprises 1,2-di-O-octadecenyl-3-trimethylammonium propane (DOTMA) and/or 1,2- dioleoyl-3-trimethylammonium-propane (DOTAP).
- the at least one additional lipid comprises 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine (DOPE), cholesterol (Chol) and/or 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC).
- DOPE 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine
- DOPC 1,2-dioleoyl-sn-glycero-3-phosphocholine
- the at least one cationic lipid comprises 1,2-di-O-octadecenyl-3- trimethylammonium propane (DOTMA) and the at least one additional lipid comprises 1,2-di- (9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine (DOPE).
- the liposomes and RNA lipoplex particles comprise 1,2-di-O-octadecenyl-3-trimethylammonium propane (DOTMA) and 1,2-di-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine (DOPE).
- Lipid nanoparticles Lipid nanoparticles
- nucleic acid such as RNA described herein is administered in the form of lipid nanoparticles (LNPs).
- LNP lipid nanoparticles
- the LNP may comprise any lipid capable of forming a particle to which the one or more nucleic acid molecules are attached, or in which the one or more nucleic acid molecules are encapsulated.
- the LNP comprises one or more cationic lipids, and one or more stabilizing lipids.
- Stabilizing lipids include neutral lipids and pegylated lipids.
- the LNP comprises a cationic lipid, a neutral lipid, a steroid, a polymer conjugated lipid; and the RNA, encapsulated within or associated with the lipid nanoparticle.
- the LNP comprises from 40 to 55 mol percent, from 40 to 50 mol percent, from 41 to 49 mol percent, from 41 to 48 mol percent, from 42 to 48 mol percent, from 43 to 48 mol percent, from 44 to 48 mol percent, from 45 to 48 mol percent, from 46 to 48 mol percent, from 47 to 48 mol percent, or from 47.2 to 47.8 mol percent of the cationic lipid.
- the LNP comprises about 47.0, 47.1, 47.2, 47.3, 47.4, 47.5, 47.6, 47.7, 47.8, 47.9 or 48.0 mol percent of the cationic lipid.
- the neutral lipid is present in a concentration ranging from 5 to 15 mol percent, from 7 to 13 mol percent, or from 9 to 11 mol percent. In one embodiment, the neutral lipid is present in a concentration of about 9.5, 10 or 10.5 mol percent.
- the steroid is present in a concentration ranging from 30 to 50 mol percent, from 35 to 45 mol percent or from 38 to 43 mol percent. In one embodiment, the steroid is present in a concentration of about 40, 41, 42, 43, 44, 45 or 46 mol percent.
- the LNP comprises from 1 to 10 mol percent, from 1 to 5 mol percent, or from 1 to 2.5 mol percent of the polymer conjugated lipid.
- the LNP comprises from 40 to 50 mol percent a cationic lipid; from 5 to 15 mol percent of a neutral lipid; from 35 to 45 mol percent of a steroid; from 1 to 10 mol percent of a polymer conjugated lipid; and the RNA, encapsulated within or associated with the lipid nanoparticle.
- the mol percent is determined based on total mol of lipid present in the lipid nanoparticle.
- the neutral lipid is selected from the group consisting of DSPC, DPPC, DMPC, DOPC, POPC, DOPE, DOPG, DPPG, POPE, DPPE, DMPE, DSPE, and SM.
- the neutral lipid is selected from the group consisting of DSPC, DPPC, DMPC, DOPC, POPC, DOPE and SM.
- the neutral lipid is DSPC.
- the steroid is cholesterol
- the polymer conjugated lipid is a pegylated lipid.
- the pegylated lipid has the following structure: or a pharmaceutically acceptable salt, tautomer or stereoisomer thereof, wherein:
- R 12 and R 13 are each independently a straight or branched, saturated or unsaturated alkyl chain containing from 10 to 30 carbon atoms, wherein the alkyl chain is optionally interrupted by one or more ester bonds; and w has a mean value ranging from 30 to 60.
- R 12 and R 13 are each independently straight, saturated alkyl chains containing from 12 to 16 carbon atoms.
- w has a mean value ranging from 40 to 55.
- the average w is about 45.
- R 12 and R 13 are each independently a straight, saturated alkyl chain containing about 14 carbon atoms, and w has a mean value of about 45.
- G 1 and G 2 are each independently unsubstituted C 1 -C 12 alkylene or C 1 -C 12 alkenylene;
- G 3 is C 1 -C 24 alkylene, C 1 -C 24 alkenylene, C 3 -C 8 cycloalkylene, C 3 -C 8 cycloalkenylene;
- R a is H or C 1 -C 12 alkyl
- R 1 and R 2 are each independently C 6 -C 24 alkyl or C 6 -C 24 alkenyl
- R 4 is C 1 -C 12 alkyl
- R 5 is H or C 1 -C 6 alkyl; and x is 0, 1 or 2.
- the lipid has one of the following structures (I I IA) or (IIIB): wherein:
- A is a 3 to 8-membered cycloalkyl or cycloalkylene ring
- R 6 is, at each occurrence, independently H, OH or C 1 -C 24 alkyl; n is an integer ranging from 1 to 15.
- the lipid has structure (IIIA), and in other embodiments, the lipid has structure (IIIB).
- the lipid has one of the following structures (IIIC) or (IIID):
- y and z are each independently integers ranging from 1 to 12.
- the lipid has one of the following structures
- the lipid has one of the following structures (IIIG), (IIIH), (IllI), or (IIIJ ):
- n is an integer ranging from 2 to 12, for example from 2 to 8 or from 2 to 4.
- n is 3, 4, 5 or 6.
- n is 3.
- n is 4.
- n is 5.
- n is 6.
- y and z are each independently an integer ranging from 2 to 10.
- y and z are each independently an integer ranging from 4 to 9 or from 4 to 6.
- R 6 is H. In other of the foregoing embodiments, R 6 is C 1 -C 24 alkyl. In other embodiments, R 6 is OH.
- G 3 is unsubstituted. In other embodiments, G3 is substituted. In various different embodiments, G 3 is linear C 1 -C 24 alkylene or linear C 1 -C 24 alkenylene.
- R 1 or R 2 is C 6 -C 24 alkenyl.
- R 1 and R 2 each, independently have the following structure: wherein:
- R 7a and R 7b are, at each occurrence, independently H or C 1 -C 12 alkyl; and a is an integer from 2 to 12, wherein R 7a , R 7b and a are each selected such that R 1 and R 2 each independently comprise from 6 to 20 carbon atoms.
- a is an integer ranging from 5 to 9 or from 8 to 12.
- At least one occurrence of R 7a is H.
- R 7a is H at each occurrence.
- at least one occurrence of R 7b is C 1 -C 8 alkyl.
- C 1 -C 8 alkyl is methyl, ethyl, n-propyl, iso-propyl, n-butyl, iso-butyl, tert-butyl, n-hexyl or n-octyl.
- R 1 or R 2 has one of the following structures:
- R 4 is methyl or ethyl.
- the cationic lipid of Formula (III) has one of the structures set forth in the table below.
- the LNP comprises a lipid of Formula (III), RNA, a neutral lipid, a steroid and a pegylated lipid.
- the lipid of Formula (III) is compound III-3.
- the neutral lipid is DSPC.
- the steroid is cholesterol.
- the pegylated lipid is ALC-0159.
- the cationic lipid is present in the LNP in an amount from about 40 to about 50 mole percent. In one embodiment, the neutral lipid is present in the LNP in an amount from about 5 to about 15 mole percent. In one embodiment, the steroid is present in the LNP in an amount from about 35 to about 45 mole percent. In one embodiment, the pegylated lipid is present in the LNP in an amount from about 1 to about 10 mole percent.
- the LNP comprises compound 111-3 in an amount from about 40 to about 50 mole percent, DSPC in an amount from about 5 to about 15 mole percent, cholesterol in an amount from about 35 to about 45 mole percent, and ALC-0159 in an amount from about 1 to about 10 mole percent.
- the LNP comprises compound 111-3 in an amount of about 47.5 mole percent, DSPC in an amount of about 10 mole percent, cholesterol in an amount of about 40.7 mole percent, and ALC-0159 in an amount of about 1.8 mole percent.
- the N/P value is preferably at least about 4. In some embodiments, the N/P value ranges from 4 to 20, 4 to 12, 4 to 10, 4 to 8, or 5 to 7. In one embodiment, the N/P value is about 6.
- agents described herein may be administered in pharmaceutical compositions or medicaments and may be administered in the form of any suitable pharmaceutical composition.
- the pharmaceutical composition described herein is a composition against coronavirus in a subject.
- RNA encoding a binding agent may be administered in a pharmaceutical composition which may comprise a pharmaceutically acceptable carrier and may optionally comprise one or more adjuvants, stabilizers etc.
- the pharmaceutical composition is for therapeutic or prophylactic treatments, e.g., for use in treating or preventing a coronavirus infection.
- pharmaceutical composition relates to a formulation comprising a therapeutically effective agent, preferably together with pharmaceutically acceptable carriers, diluents and/or excipients. Said pharmaceutical composition is useful for treating, preventing, or reducing the severity of a disease or disorder by administration of said pharmaceutical composition to a subject.
- a pharmaceutical composition is also known in the art as a pharmaceutical formulation.
- compositions according to the present disclosure are generally applied in a "pharmaceutically effective amount" and in “a pharmaceutically acceptable preparation".
- pharmaceutically acceptable refers to the non-toxicity of a material which does not interact with the action of the active component of the pharmaceutical composition.
- the term "pharmaceutically effective amount” or “therapeutically effective amount” refers to the amount which achieves a desired reaction or a desired effect alone or together with further doses.
- the desired reaction preferably relates to inhibition of the course of the disease. This comprises slowing down the progress of the disease and, in particular, interrupting or reversingthe progress of the disease.
- the desired reaction in a treatment of a disease may also be delay of the onset or a prevention of the onset of said disease or said condition.
- compositions described herein will depend on the condition to be treated, the severeness of the disease, the individual parameters of the patient, including age, physiological condition, size and weight, the duration of treatment, the type of an accompanying therapy (if present), the specific route of administration and similar factors. Accordingly, the doses administered of the compositions described herein may depend on various of such parameters. In the case that a reaction in a patient is insufficient with an initial dose, higher doses (or effectively higher doses achieved by a different, more localized route of administration) may be used.
- the pharmaceutical compositions of the present disclosure may contain salts, buffers, preservatives, and optionally other therapeutic agents.
- the pharmaceutical compositions of the present disclosure comprise one or more pharmaceutically acceptable carriers, diluents and/or excipients.
- Suitable preservatives for use in the pharmaceutical compositions of the present disclosure include, without limitation, benzalkonium chloride, chlorobutanol, paraben and thimerosal.
- excipient refers to a substance which may be present in a pharmaceutical composition of the present disclosure but is not an active ingredient. Examples of excipients, include without limitation, carriers, binders, diluents, lubricants, thickeners, surface active agents, preservatives, stabilizers, emulsifiers, buffers, flavoring agents, or colorants.
- diluting and/or thinning agent relates a diluting and/or thinning agent.
- the term “diluent” includes any one or more of fluid, liquid or solid suspension and/or mixing media. Examples of suitable diluents include ethanol, glycerol and water.
- carrier refers to a component which may be natural, synthetic, organic, inorganic in which the active component is combined in order to facilitate, enhance or enable administration of the pharmaceutical composition.
- a carrier as used herein may be one or more compatible solid or liquid fillers, diluents or encapsulating substances, which are suitable for administration to subject. Suitable carriers include, without limitation, sterile water, Ringer, Ringer lactate, sterile sodium chloride solution, isotonic saline, polyalkylene glycols, hydrogenated naphthalenes and, in particular, biocompatible lactide polymers, lactide/glycolide copolymers or polyoxyethylene/polyoxy-propylene copolymers.
- the pharmaceutical composition of the present disclosure includes isotonic saline.
- Pharmaceutically acceptable carriers, excipients or diluents for therapeutic use are well known in the pharmaceutical art, and are described, for example, in Remington's Pharmaceutical Sciences, Mack Publishing Co. (A. R Gennaro edit. 1985). Pharmaceutical carriers, excipients or diluents can be selected with regard to the intended route of administration and standard pharmaceutical practice.
- compositions described herein may be administered intravenously, intraarterially, subcutaneously, intradermally or intramuscularly.
- the pharmaceutical composition is formulated for local administration or systemic administration.
- Systemic administration may include enteral administration, which involves absorption through the gastrointestinal tract, or parenteral administration.
- parenteral administration refers to the administration in any manner other than through the gastrointestinal tract, such as by intravenous injection.
- the pharmaceutical composition is formulated for intramuscular administration.
- the pharmaceutical composition is formulated for systemic administration, e.g., for intravenous administration.
- co-administering means a process whereby different compounds or compositions are administered to the same patient.
- the different compounds or compositions may be administered simultaneously, at essentially the same time, or sequentially.
- the present invention provides methods and agents for blocking coronavirus S protein binding to ACE2, in particular for neutralizing coronavirus S protein binding to ACE2 in a subject.
- Methods described herein may comprise administering an effective amount of a composition comprising RNA encoding a binding agent described herein.
- the methods and agents described herein provide a neutralizing effect in a subject to coronavirus, coronavirus infection, or to a disease or disorder associated with coronavirus.
- the present invention thus provides methods and agents for treating or preventing the infection, disease, or disorder associated with coronavirus.
- neutralization refers to an event in which a binding agent binds to a biological activity site of a virus such as a receptor binding protein, thereby inhibiting the viral infection of cells.
- neutralization refers, in particular, to a binding agent that can eliminate or significantly reduce virulence (e.g. ability of infecting cells) of viruses of interest.
- the methods and agents described herein are administered to a subject having an infection, disease, or disorder associated with coronavirus. In one embodiment, the methods and agents described herein are administered to a subject at risk for developing the infection, disease, or disorder associated with coronavirus. For example, the methods and agents described herein may be administered to a subject who is at risk for being in contact with coronavirus. In one embodiment, the methods and agents described herein are administered to a subject who lives in, traveled to, or is expected to travel to a geographic region in which coronavirus is prevalent.
- the methods and agents described herein are administered to a subject who is in contact with or expected to be in contact with another person who lives in, traveled to, or is expected to travel to a geographic region in which coronavirus is prevalent. In one embodiment, the methods and agents described herein are administered to a subject who has knowingly been exposed to coronavirus through their occupation, or other contact.
- a coronavirus is SARS-CoV-1 or SARS-CoV-2. In one embodiment, a coronavirus is SARS-CoV-2.
- the therapeutic compounds or compositions of the invention may be administered prophylactically (i.e., to prevent a disease or disorder) or therapeutically (i.e., to treat a disease or disorder) to subjects suffering from, or at risk of (or susceptible to) developing a disease or disorder. Such subjects may be identified using standard clinical methods.
- prophylactic administration occurs prior to the manifestation of overt clinical symptoms of disease, such that a disease or disorder is prevented or alternatively delayed in its progression.
- the term "prevent” encompasses any activity, which reduces the burden of mortality or morbidity from disease. Prevention can occur at primary, secondary and tertiary prevention levels.
- administration of an agent or composition of the present invention may be performed by single administration or boosted by multiple administrations.
- disease refers to an abnormal condition that affects the body of an individual.
- a disease is often construed as a medical condition associated with specific symptoms and signs.
- a disease may be caused by factors originally from an external source, such as infectious disease, or it may be caused by internal dysfunctions, such as autoimmune diseases.
- "disease” is often used more broadly to refer to any condition that causes pain, dysfunction, distress, social problems, or death to the individual afflicted, or similar problems for those in contact with the individual. In this broader sense, it sometimes includes injuries, disabilities, disorders, syndromes, infections, isolated symptoms, deviant behaviors, and atypical variations of structure and function, while in other contexts and for other purposes these may be considered distinguishable categories. Diseases usually affect individuals not only physically, but also emotionally, as contracting and living with many diseases can alter one's perspective on life, and one's personality.
- treatment relates to the management and care of a subject for the purpose of combating a condition such as a disease or disorder.
- the term is intended to include the full spectrum of treatments for a given condition from which the subject is suffering, such as administration of the therapeutically effective compound to alleviate the symptoms or complications, to delay the progression of the disease, disorder or condition, to alleviate or relief the symptoms and complications, and/or to cure or eliminate the disease, disorder or condition as well as to prevent the condition, wherein prevention is to be understood as the management and care of an individual for the purpose of combating the disease, condition or disorder and includes the administration of the active compounds to prevent the onset of the symptoms or complications.
- terapéutica treatment relates to any treatment which improves the health status and/or prolongs (increases) the lifespan of an individual.
- Said treatment may eliminate the disease in an individual, arrest or slow the development of a disease in an individual, inhibit or slow the development of a disease in an individual, decrease the frequency or severity of symptoms in an individual, and/or decrease the recurrence in an individual who currently has or who previously has had a disease.
- prophylactic treatment or “preventive treatment” relate to any treatment that is intended to prevent a disease from occurring in an individual.
- the terms “prophylactic treatment” or “preventive treatment” are used herein interchangeably.
- the terms “individual” and “subject” are used herein interchangeably. They refer to a human or another mammal (e.g. mouse, rat, rabbit, dog, cat, cattle, swine, sheep, horse or primate) that can be afflicted with or is susceptible to a disease or disorder but may or may not have the disease or disorder. In many embodiments, the individual is a human being. Unless otherwise stated, the terms “individual” and “subject” do not denote a particular age, and thus encompass adults, elderlies, children, and newborns. In embodiments of the present disclosure, the "individual” or “subject” is a "patient”.
- patient means an individual or subject for treatment, in particular a diseased individual or subject.
- the aim is to prevent or treat coronavirus infection.
- infectious disease refers to any disease which can be transmitted from individual to individual or from organism to organism, and is caused by a microbial agent (e.g. common cold). Infectious diseases are known in the art and include, for example, a viral disease, a bacterial disease, or a parasitic disease, which diseases are caused by a virus, a bacterium, and a parasite, respectively. In this regard, the infectious disease can be, for example, hepatitis, sexually transmitted diseases (e.g.
- chlamydia or gonorrhea tuberculosis, HIV/acquired immune deficiency syndrome (AIDS), diphtheria, hepatitis B, hepatitis C, cholera, severe acute respiratory syndrome (SARS), the bird flu, and influenza.
- AIDS HIV/acquired immune deficiency syndrome
- diphtheria diphtheria
- hepatitis B hepatitis C
- cholera severe acute respiratory syndrome
- the bird flu and influenza.
- Plasmid DNAs encoding these protein constructs were transfected into HEK-293 FreeStyleTM cells and proteins purified from the culture supernatants by protein-A affinity and subsequent size exclusion chromatography.
- Figure 1 provides an overview on the generated constructs.
- Example 2 Binding of anti-S1-antibody-ACE2 fusion proteins to recombinant SARS-CoV2 S1- RBD protein
- binding potencies of anti-S1-antibody-ACE2 fusion proteins to SARS-CoV2 S1-RBD protein were determined in an ELISA.
- Mouse-Fc-tagged SARS-CoV2 S1-RBD (Sino Biologicals) recombinant protein was coated on 384-well Nunc MaxiSorpTM flat bottom plates at a concentration of 2.5 pg/ml in PBS for 60 minutes at room temperature. After 3 washes with PBS 0.1% Tween (wash buffer), blocking with PBS, 2% BSA, 0.05% Tween for 60 minutes at room temperature and another 3 washes, anti-S1-antibody-ACE2 fusion proteins were added in PBS, 0.5% BSA, 0.05% Tween (ELISA buffer) in concentrations ranging from 20,000 to 0.013 ng/ml and the plate was incubated for 60 minutes at room temperature.
- recombinant ACE-2 extracellular domain with human-Fc tag was used as a control.
- the horseradish peroxidase coupled detection anti-human IgG, Fey fragment specific F(ab') 2 fragment (Jackson Immuno Research) was added in ELISA buffer at a dilution of 1:2,500.
- the plate was incubated for 60 minutes at room temperature, washed 6 times with wash buffer before TMB solution (Thermo Fisher Scientific) was added. After 6 minutes HCI was added and the absorbance at wavelengths of 450 and 620 nm recorded using a Tecan Infinite M1000 reader.
- Example 3 Neutralization of SARS-CoV2-S1-RBD binding to ACE2 by anti-S1-antibody-ACE2 fusion proteins
- the potency of anti-S1-antibody-ACE2 fusion proteins in neutralizing the SARS-CoV2 S1-RBD binding to the ACE-2 extracellular domain was investigated in a competition ELISA. His-tagged human ACE-2 extracellular domain (Sino Biologicals) recombinant protein was coated on a 384-well Nunc MaxiSorpTM flat bottom plate at a concentration of 2.5 pg/ml in PBS for 60 minutes at room temperature. After 3 washes with PBS 0.1% Tween (wash buffer), the MaxiSorpTM plate was blocked with PBS, 2% BSA, 0.05% Tween for 60 minutes at room temperature.
- the data in Figure 3 demonstrates that the anti-S1-antibody (408, 413) does not block the interaction of the S1-RBD with the ACE2 extracellular domain significantly at the tested concentrations, whereas the hFc-tagged ACE2 extracellular domain (402, 403) blocks the interaction with an IC50 value > 4 ⁇ g/ml.
- the anti-S1-antibody-ACE2 fusion proteins inhibit this interaction with IC50 values ranging from 32.4 to 97.8 ng/ml and thus with about > 40 times increased potency over ACE2-hFc in this assay.
- Example 4 Pseudovirus neutralization activity by anti-S1-antibody-ACE2 fusion proteins
- VSV vesicular stomatitis virus
- ORF open-reading frame
- GFP green fluorescent protein
- Vero-76 cells were thawed and diluted to 2.67 x 10 5 cells/mL in assay medium (DMEM/10% FBS) and seeded in 96-well flat-bottom plates at 4 x io 4 cells per well. Cells were incubated for 4 to 6 hours at 37°C and 7.5% CO2.
- assay medium DMEM/10% FBS
- VSV/SARS CoV2 pseudovirus was thawed and diluted to obtain 4.8 x 10 3 infectious units [IU]/mL 30 pL of diluted pseudovirus was added to the wells containing 30pl anti-S1-antibody-ACE2 fusion proteins, anti-S1- antibody or ACE-2-hFc for final concentrations ranging from 200 to 0.092 pg/ml.
- Pseudovirus/test protein mix was incubated for 10 min at RT on a microplate shaker at 400 rpm. Pseudovirus/test protein dilution mix was then added to the seeded Vero-76 cells (MOI:0.003), followed by incubation for 16 to 24 hours at 37°C and 5% CO 2 .
- SARS-CoV-2 S1 protein HARS tag, active trimer; Aero Biosystems #SPN-C52H8
- SARS-CoV-2 S1 protein was immobilized to a CM5 sensor chip surface via an anti-HIS- tag antibody at two different densities (Rmax ⁇ 100 RU and Rmax ⁇ 620 RU).
- SARS-CoV-2 S1-RBD Protein coupled to a mouse Fc-tag (Sino Biologicals #40592-V05H) was immobilized to a CM5 sensor chip surface via an anti-mouse-Fc antibody at two different densities (Rmax ⁇ 20 RU and Rmax ⁇ 250 RU).
- the kinetics of the interaction of immobilized SARS-CoV-2 S1 Protein (active trimer) or SARS-CoV-2 S1-RBD Protein with soluble anti-S1-antibody-ACE2 fusion proteins were analysed on a Biacore T200 SPR instrument. Kinetic data were determined using a Langmuir 1:1 binding model.
- Figure 5 A and B show that the fusion proteins 406, 411 and 412 have slower on-rates but also slower off-rates in binding to both the SARS-CoV-2 S1 Protein (active trimer) or SARS-CoV-2 S1-RBD Protein compared to the anti-S1 antibody (413).
- the off-rates of the fusion proteins are also significantly slower. Therefore, once fusion proteins 406, 411 and 412 have bound to the S1 protein, they remain bound to the S1 protein for a longer time compared to the anti- S1 antibody or the ACE-2-Fc alone and may block the interaction between virus-expressed S1 protein and cell-expressed ACE-2 receptor more persistently than a soluble ACE-2-Fc protein.
- Example 6 Generation of SARS-CoV-2 S1-RBD binding, neutralizing antibodies
- New Zealand White rabbits were immunized with either recombinant SARS-CoV-2 S1-RBD-mFc protein or S1-RBD encoding mRNA.
- Single B-cells were isolated by FACS and cultivated to obtain monoclonal antibodies in the medium supernatant. After 7 days of cultivation, B-cell supernatant were separated from the B-cells to perform binding and functional assays.
- B-cells were lysed in RNA extraction RLT buffer for RNA extraction, RT-PCR and Sanger sequencing of the antibody heavy and light chain variable regions.
- B-cell supernatants were diluted 1:10, 1:30, 1:100, 1:300, 1:100 and 1:3,000 and incubated on plates coated with a goat anti-rabbit- IgG antibody (Sigma-Aldrich). Captured rabbit IgG was detected using a horseradish peroxidase-linked species-specific anti-rabbit-IgG F(ab) 2 Fragment from donkey (GE Healthcare). ODs at 450/620 nm were recorded using a Tecan Infinite M1000 instrument and correlated to standard curves obtained with purified rabbit IgG (Sigma Aldrich). The calculated rlgG concentrations of monoclonal antibodies in B-cell supernatants are summarized in Figure 6A.
- the binding potency of anti-S1-antibodies of the invention in B-cell supernatants to SARS- CoV2 S1 protein has been tested in an ELISA.
- Human-Fc-tagged SARS-CoV2 S1 recombinant protein (Sino Biologicals) was coated on a 384-well Nunc MaxiSorpTM flat bottom plate at a concentration of 0.875 or 3 ⁇ g/ml in PBS for 60 minutes at room temperature.
- the horseradish peroxidase coupled detection anti-rabbit IgG F(ab') 2 fragment (Cytiva) or for the control the horseradish peroxidase coupled detection anti-mouse IgG F(ab') 2 fragment (Cytiva) was added in ELISA buffer at a dilution of 1:4,000 or 1:1,000, respectively.
- the plate was incubated for 60 minutes at room temperature, washed 6 times with wash buffer before TMB solution (Thermo Fisher Scientific) was added. After 6 minutes HCI was added and the absorbance at wavelengths of 450 and 620 nm recorded using a Tecan Infinite M1000 reader.
- Fitting curves and EC50 calculation were obtained by using Excel (Microsoft) and XLfit (IDBS).
- the data in figure 6B and C shows that all antibodies secreted in monoclonal B-cell supernatants bind in a dose dependent manner to SARS-CoV2 S1 recombinant protein and with lower EC50 values as compared to mFc-tagged ACE-2 extracellular domain.
- Example 8 Neutralization of the SARS-CoV2-S1 - ACE-2 interaction by antibodies in B-cell supernatants
- anti-S1-antibodies containing B-cell supernatants at a concentration from 2,000 to 0.08 ng/ml were pre- incubated with 60 ng/ml human-Fc-tagged SARS-CoV2 S1 (Sino Biologicals) recombinant protein diluted in PBS, 0.5% BSA, 0.05% Tween (ELISA buffer) for 60 minutes at room temperature.
- recombinant ACE-2 extracellular domain with mouse-Fc tag (Sino Biologicals) was used.
- the pre-incubation anti-S1 antibody/S1 protein mix from the Corning plate was transferred onto the MaxiSorpTM plate and incubated for 60 minutes at room temperature.
- the horseradish peroxidase coupled detection anti-human IgG, Fey fragment specific F(ab') 2 fragment was added in ELISA buffer at a dilution of 1:5,000.
- the plate was incubated for 60 minutes at room temperature, washed 6 times with wash buffer before TMB solution (Thermo Fisher Scientific) was added. After 15 minutes HCI was added and the absorbance at wavelengths of 450 and 620 nm recorded using a Tecan Infinite M1000 reader.
- Fitting curves and IC50 calculation were obtained by using Excel (Microsoft) and XLfit (IDBS).
- the data in figure 7A and B shows that all antibodies secreted in monoclonal B-cell supernatants block the interaction between SARS-CoV2 S1 and ACE-2 recombinant proteins in a dose dependent manner and with significantly lower EC50 values as compared to mFc-tagged ACE-2 extracellular domain.
- Example 9 Binding of purified hlgG1-LALA-LS chimeric antibodies to SARS-CoV2-S/S1-RBD and SARS-CoV-S1-RBD recombinant protein
- variable region sequences of the antibodies of the invention were cloned in frame with hlgGl constant light and heavy chain sequences to obtain chimeric antibody constructs.
- L234A and L235A were introduced which are described to reduce Fey receptor binding (Hezareh et al. 2001) and the LS (M428L/N434S) mutation.
- Plasmid DNAs encoding chimeric light and heavy chains were cotransfected into HEK-293 FreestyleTM cells and antibodies purified from the culture supernatants by protein-A affinity and subsequent size exclusion chromatography.
- potencies of chimeric anti-S1-antibodies of the invention in binding to SARS-CoV S1-RBD, SARS-CoV2 S (active trimer) and SARS-CoV2 S1-RBD protein were determined in an ELISA.
- His- tagged SARS-CoV S1-RBD (Sino Biologicals), His-tagged SARS-CoV2 S active trimer (AcroBiosystems) and mouse-Fc-tagged SARS-CoV2 S1-RBD (Sino Biologicals) recombinant proteins were coated on 384-well Nunc MaxiSorpTM flat bottom plates at a concentration of pg/ml, 1 pg/ml and 2.5 pg/ml in PBS for 60 minutes at room temperature.
- the data in figure 8 A and B demonstrates that the tested chimeric antibodies of the invention all bind to SARS-Co ⁇ /2 S (active trimer) and the SARS-CoV2 S1-RBD with similar potency characterized by EC50 values between 3.4 and 11.2 ng/ml. These EC50 are lower than those measured for ACE2-hFc and anti-S1-ACE2 fusion construct 406.
- the chimeric antibodies P043.A.00047.H08 and P043.A.00117.C08 are also able to bind to SARS-CoV S1-RBD with a calculated EC50 of 8.1 and 88.5 ng/ml, respectively.
- Example 10 Neutralization of SARS-CoV2-S1-RBD binding to ACE2 by chimeric antibodies of the invention
- the potency of purified, chimeric antibodies of the invention in neutralizing the SARS-CoV2 S1-RBD binding to the ACE-2 extracellular domain was investigated in a competition ELISA as described in example 3. All chimeric antibodies block the interaction of ACE-2 with SARS-CoV2 S1-RBD in a dose-dependent manner. EC50 values range from 19.2 to 115 ng/ml. The inhibition observed by the chimeric of the antibodies of the invention is significantly more potent than the inhibition observed with ACE2-hFc (402/403) (figure 9 A and B).
- Example 11 Pseudovirus neutralization activity by purified antibodies of the invention
- a pseudovirus neutralization test (pVNT) was performed as described in example 4 but with the following adaptations.
- Vero-76 cells were thawed and diluted to 0.5 x 10 6 cells/mL in assay medium (DMEM/10% FBS) and seeded in 384-well flat-bottom tissue culture plates (Corning) at 1 x 10 4 cells per well. Cells were incubated for 4 to 6 hours at 37°C and 5% CO2. VSV/SARS CoV2 pseudovirus was thawed and diluted to obtain 12 x 10 3 infectious units [IU]/mL.
- assay medium DMEM/10% FBS
- VSV/SARS CoV2 pseudovirus was thawed and diluted to obtain 12 x 10 3 infectious units [IU]/mL.
- Figure 10 demonstrates that the anti-S1-antibody (413) and the ACE2-hFC (403) do not significantly affect infection of Vero-76 cells by the pseudovirus whereas the anti-S1-antibody-ACE2 fusion protein (411) and many chimeric antibodies of the invention inhibit infection in a dose dependent manner. Most of the chimeric antibodies show stronger neutralizing activities than protein 411 by achieving complete neutralization already at lower concentrations.
- Figure 10 demonstrates that the anti-S1-antibody (413) and the ACE2-hFC (403) do not significantly affect infection of Vero-76 cells by the pseudovirus whereas the anti-S1-antibody-ACE2 fusion protein (411) and many chimeric antibodies of the invention inhibit infection in a dose dependent manner. Most of the chimeric antibodies show stronger neutralizing activities than protein 411 by achieving complete neutralization already at lower concentrations.
- Example 12 SARS-CoV2-S1-RBD epitope competition among antibodies of the invention
- P043.A.00047.H08 is the only antibody in the set of tested chimeric antibodies of the invention which only competes with itself in the assay but with none of the other antibodies, including the anti-S1- mAB. In contrast, all other chimeric antibodies of the invention do compete amongst each other indicating they have overlapping epitopes on the S1-RBD protein. None of the chimeric antibodies of the invention competes with the anti-S1 mAB.
- Example 13 Generation of IVT-mRNA based anti-S1-antibody-ACE2 fusion RiboMabs. a. Cloning of antibody IVT-mRNA template vectors and IVT-mRNA synthesis
- the poly(A) tail-encoding region (A30LA70) consists of 30 adenine codons, a linker (L) and further 70 adenine codons (PCT/EP2015/065357). All antibody domains originate from human IgG1. The following constructs were cloned for the formation of anti-S1-antibody-ACE2 fusion RiboMabs:
- RiboMab_406 pST1-5'hAg-Sec-VH anti - s1 -C H 1-CH2-C H 3 (Met434Leu ' Asn428Ser) -FI-A30LA70 (HC) pST1-5'hAg-Sec-V L anti-s1 -C L -(G 4 S) 4 -ACE2-ECD-FI-A30LA70 (LC-ACE2)
- RiboMab_411 pST1-5'hAg-Sec-VH anti-s1 -C H 1-CH2-C H 3-FI-A30LA70 (HC) pST1-5'hAg-Sec-VL anti-s1 -CL-(G 4 S) 4 -ACE2-ECD-FI-A30LA70 (LC-ACE2)
- 5'hAg 5'UTR from human alpha-globin
- A adenine; Asn, asparagine
- CL constant light chain region
- CH constant heavy chain region
- ECD extracellular domain of ACE2
- Fl 3'UTR sequence
- G 4 S glycine-serine linker encoding sequence
- HC heavy chain
- Leu leucine
- LC light chain
- Met methionine
- pST1 DNA template vector
- Sec secretion signal
- Ser serine
- VH variable heavy chain domain
- VL variable light chain domain.
- plasmid DNAs were linearized downstream of the poly(A) tail-encoding region using a class Ils restriction endonuclease, thereby generating a template to transcribe RNAs with no additional nucleotides past the poly(A)-tail (Holtkamp, S. et al. (2006) Blood 108 (13), 4009-4017).
- Linearized template DNAs were purified, spectrophotometrically quantified, and then subjected to in vitro transcription with T7 RNA polymerase essentially as previously described (Grudzien-Nogalska, E. et al. (2013): Synthetic mRNAs with superior translation and stability properties.
- Example 14 Expression and protein integrity of anti-S1-antibody-ACE2 fusion RiboMabs in vitro. a. Electroporation of producer cells
- the RNA mixture contained a mass ratio of the mRNAs encoding HC and LC- ACE2 of 0:1, 0.6:1, 0.8:1, 1:1, or 1:0, respectively.
- Cells were immediately electroporated with a BTX ECM830 (BTX Harvard Apparatus, Holliston, MA, USA) with the following setting: 250 V, 2 pulses, 5 ms.
- Viable cells were subsequently seeded in Expi293TM medium (Gibco Thermo Fischer Scientific, Darmstadt, Germany) at a density of 2 x 10 6 /mL in 12-well tissue culture plates (Cellstar*, Greiner Bio-One, Frickenhausen, Germany).
- Anti-S1-antibody-ACE2 fusion RiboMabs in SN from electroporated HEK 293T/17 cells were quantified using a Gyros xPandTM XPA1025 device (Gyros Protein Technologies AB, Uppsala, Sweden). All materials were from Gyros Protein Technologies AB, if not stated otherwise.
- a sandwich immunoassay was run with Gyrolab ® huIgG Kit - Low Titer according to the manufacturer's protocol. The reagent kit components were used with the Gyrolab* Bioaffy 1000 HC CD for protein concentrations in a dynamic range of 20-9,000 ng/mL.
- the HC-to-LC-ACE2 mRNA mass ratio of 0.6:1 yielded the highest anti-S1-antibody-ACE2 fusion RiboMab concentration of app. 5 pg/mL.
- a ratio of 0.8:1 resulted in approximately 2.5 ⁇ g/mL and a ratio of 1:1 in approximately 2 pg/mL.
- RiboMab_411 and RiboMab_406 were equally expressed (Fig. 14A).
- Example 13a Western Blot analysis of anti-S1-antibody-ACE2 fusion in producer cell culture supernatant SN of HEK 293T/17 cells (Example 13a) were used for the analysis of translation and secretion of anti-S1-antibody-ACE2 fusion RiboMabs.
- SN and reference protein spikeked in Mock SN were accomplished with water and 4x Laemmli buffer (Bio-Rad Laboratories, Dreieich, Germany) to a final volume of 21.5 pL and heated to 95°C for 5 min without (non-reducing, Fig. 14B) or with (reducing, Fig. 14C) IM Dithiothreitol (DTT, final concentration 0.1M, Carl Roth GmbH & Co.
- Nitrocellulose membranes (Bio-Rad) were blocked with a 5% milk solution (Carl Roth GmbH & Co. KG) for one hour. Proteins were detected with a mixture of the polyclonal antibodies Peroxidase AffiniPure Goat Anti-Human IgG, Fey fragment specific (dilution 1:2,000; Jackson ImmunoResearch, Cambridge, UK) and Goat anti-Human Kappa Light Chain Cross-Adsorbed Secondary Antibody, HRP (dilution 1:200; Invitrogen/Thermo Fisher Scientific, Darmstadt, Germany) diluted in 3% BSA Fraction V solution (Eurobio Scientific, Les Ulis, France).
- Example 15 Estimation of pharmacokinetic behavior of anti-S1-antibody-ACE2 fusion RiboMabs in mice
- mice To determine the approximate half-life and clearance of anti-S1-antibody-ACE2 fusion RiboMabs in mice, we used female Balb/cJRj (Janvier Labs, Le Genest-Saint-lsle, France) mice at 11 weeks of age. For injection, an RNA mixture ratio of HC-to-LC-ACE2 of 0.925:1 had been encapsulated in liver-targeting cationic lipid nanoparticles (LNP) (Jayaraman, M. et al. (2012), Angewandte Chemie (International ed. in English) 51 (34), 8529-8533).
- LNP liver-targeting cationic lipid nanoparticles
- RNA-LNP encoding RiboMab_406 or RiboMab_411 was intravenously injected per mouse.
- Group sizes comprised 12 mice per RNA-LNP with four mice corresponding to one time point of blood retrieval. Serum of mice bled 14 days before injection served as baseline. Further time points for blood retrieval were set at 6, 24, 48, 96, 240 hours. Blood was directly collected in Microvette 500Z Gel tubes (Sarstedt, Nurmbrecht, Germany) and serum was separated via centrifugation as known by the person skilled in the art. Serum was harvested, immediately flash-frozen in liquid nitrogen and stored at -65 to -85°C until use.
- Anti-S1-antibody-ACE2 fusion RiboMab concentrations in mouse sera were quantified using Gyros xPandTM XPA1025 immunoassay device (Gyros Protein Technologies AB). All materials were from Gyros Protein Technologies AB, if not stated otherwise.
- a sandwich immunoassay was run using Gyrolab ® Generic PK Kit or Gyrolab* Generic TK Kit according to the manufacturer's protocol.
- the capture antibody (Reagent A, included in the Gyrolab* Generic TK Kit) and the detection antibody anti-Kappa light chain Alexa Fluor* 647 (Abeam, Cambridge, UK) were used with the Gyrolab* Bioaffy 1000 HC CD for protein concentrations in a dynamic range of 0.5-1,000 ng/mL or Gyrolab® Bioaffy 20 HC CD in a dynamic range of 40-80.000 ng/mL, respectively.
- both RiboMabs are similarly expressed in vivo and show a similar pharmacokinetic behavior.
- Higher RiboMab concentrations are expected to be reached with the optimal HC-to-LC-ACE2 ratio of 0.6:1 as described in Example 14b.
- a half-time extension by the LS-mutation in the Fc part of RiboMab_406 cannot be analyzed in Balb/cJRj mice.
- a human neonatal Fc receptor (FcRn)-transgenic mouse strain has to be used.
- Example 16 Expression and protein integrity of anti-S1-antibody-ACE2 fusion RiboMabs in vivo.
Abstract
Description
Claims
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US20220048978A1 (en) * | 2020-08-11 | 2022-02-17 | Rutgers, The State University Of New Jersey | Cr3022 chimeric antigen receptors and methods of use |
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