WO2021005586A1 - Tricyclic akr1c3 dependent kars inhibitors - Google Patents
Tricyclic akr1c3 dependent kars inhibitors Download PDFInfo
- Publication number
- WO2021005586A1 WO2021005586A1 PCT/IB2020/057285 IB2020057285W WO2021005586A1 WO 2021005586 A1 WO2021005586 A1 WO 2021005586A1 IB 2020057285 W IB2020057285 W IB 2020057285W WO 2021005586 A1 WO2021005586 A1 WO 2021005586A1
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- WO
- WIPO (PCT)
- Prior art keywords
- fluoro
- spiro
- piperidine
- dihydro
- quinoline
- Prior art date
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- 230000001419 dependent effect Effects 0.000 title abstract description 26
- 239000003112 inhibitor Substances 0.000 title abstract description 26
- 150000001875 compounds Chemical class 0.000 claims abstract description 625
- 238000000034 method Methods 0.000 claims abstract description 399
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- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 18
- 230000001404 mediated effect Effects 0.000 claims abstract description 14
- 102000004602 Aldo-Keto Reductase Family 1 Member C3 Human genes 0.000 claims abstract 4
- 108010065942 Prostaglandin-F synthase Proteins 0.000 claims abstract 4
- 108091007984 KARS Proteins 0.000 claims abstract 3
- 102100035529 Lysine-tRNA ligase Human genes 0.000 claims abstract 3
- -1 (C0- C4)alkylN(R8)2 Chemical group 0.000 claims description 108
- 150000003839 salts Chemical class 0.000 claims description 72
- 125000004169 (C1-C6) alkyl group Chemical group 0.000 claims description 68
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims description 49
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- 229940124597 therapeutic agent Drugs 0.000 claims description 30
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- 125000000217 alkyl group Chemical group 0.000 claims description 27
- 229910052739 hydrogen Inorganic materials 0.000 claims description 21
- 229910052805 deuterium Inorganic materials 0.000 claims description 20
- 125000004191 (C1-C6) alkoxy group Chemical group 0.000 claims description 19
- 238000011282 treatment Methods 0.000 claims description 19
- YZCKVEUIGOORGS-OUBTZVSYSA-N Deuterium Chemical group [2H] YZCKVEUIGOORGS-OUBTZVSYSA-N 0.000 claims description 18
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- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 8
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- LMGSXTJIBZYTKE-UHFFFAOYSA-N N-[[2,4-difluoro-5-(2-hydroxyethylamino)phenyl]methyl]-1-ethyl-6-fluoro-4-oxospiro[3H-quinoline-2,4'-piperidine]-1'-carboxamide Chemical compound FC1=C(CNC(=O)N2CCC3(N(C4=CC=C(C=C4C(C3)=O)F)CC)CC2)C=C(C(=C1)F)NCCO LMGSXTJIBZYTKE-UHFFFAOYSA-N 0.000 claims description 6
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- 159000000000 sodium salts Chemical class 0.000 description 1
- RSIJVJUOQBWMIM-UHFFFAOYSA-L sodium sulfate decahydrate Chemical compound O.O.O.O.O.O.O.O.O.O.[Na+].[Na+].[O-]S([O-])(=O)=O RSIJVJUOQBWMIM-UHFFFAOYSA-L 0.000 description 1
- 239000012321 sodium triacetoxyborohydride Substances 0.000 description 1
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- 239000002594 sorbent Substances 0.000 description 1
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- VNUWWWXUTDHUHI-UHFFFAOYSA-N tert-butyl N-[(4-amino-2,3-difluorophenyl)methyl]carbamate Chemical compound NC1=C(C(=C(CNC(OC(C)(C)C)=O)C=C1)F)F VNUWWWXUTDHUHI-UHFFFAOYSA-N 0.000 description 1
- IBMKGSPETOHYNX-UHFFFAOYSA-N tert-butyl N-[(5-amino-2,4-difluorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC(N)=C(F)C=C1F IBMKGSPETOHYNX-UHFFFAOYSA-N 0.000 description 1
- WNJMWSUUUZASLV-UHFFFAOYSA-N tert-butyl N-[[2,4-difluoro-5-(2-methoxyethylamino)phenyl]methyl]carbamate Chemical compound FC1=C(CNC(OC(C)(C)C)=O)C=C(C(=C1)F)NCCOC WNJMWSUUUZASLV-UHFFFAOYSA-N 0.000 description 1
- QJNRGLPTLTWGIS-UHFFFAOYSA-N tert-butyl N-[[2-(ethylamino)-4-fluorophenyl]methyl]carbamate Chemical compound C(C)NC1=C(CNC(OC(C)(C)C)=O)C=CC(=C1)F QJNRGLPTLTWGIS-UHFFFAOYSA-N 0.000 description 1
- TWWKYAOAYWRLLS-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-2-(2-methoxyethylamino)phenyl]methyl]carbamate Chemical compound FC1=CC(=C(CNC(OC(C)(C)C)=O)C=C1)NCCOC TWWKYAOAYWRLLS-UHFFFAOYSA-N 0.000 description 1
- MROMYTGUEQGLBN-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-3-(2-methoxyethoxy)phenyl]methyl]carbamate Chemical compound FC1=C(C=C(CNC(OC(C)(C)C)=O)C=C1)OCCOC MROMYTGUEQGLBN-UHFFFAOYSA-N 0.000 description 1
- DQTPESYWFHYFSH-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-3-(2-methoxyethoxymethyl)phenyl]methyl]carbamate Chemical compound FC1=C(C=C(CNC(OC(C)(C)C)=O)C=C1)COCCOC DQTPESYWFHYFSH-UHFFFAOYSA-N 0.000 description 1
- LMNYMERJRJLIBG-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-3-(2-methoxyethylamino)phenyl]methyl]carbamate Chemical compound FC1=C(C=C(CNC(OC(C)(C)C)=O)C=C1)NCCOC LMNYMERJRJLIBG-UHFFFAOYSA-N 0.000 description 1
- IMQAYYFAPQNENT-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-3-(methanesulfonamido)phenyl]methyl]carbamate Chemical compound FC1=C(C=C(CNC(OC(C)(C)C)=O)C=C1)NS(=O)(=O)C IMQAYYFAPQNENT-UHFFFAOYSA-N 0.000 description 1
- VRNBAFJDSSHRLC-UHFFFAOYSA-N tert-butyl N-[[4-fluoro-3-(methylcarbamoyl)phenyl]methyl]carbamate Chemical compound FC1=C(C=C(CNC(OC(C)(C)C)=O)C=C1)C(NC)=O VRNBAFJDSSHRLC-UHFFFAOYSA-N 0.000 description 1
- RUPAXCPQAAOIPB-UHFFFAOYSA-N tert-butyl formate Chemical compound CC(C)(C)OC=O RUPAXCPQAAOIPB-UHFFFAOYSA-N 0.000 description 1
- ZESPVVPBNKPRRE-UHFFFAOYSA-N tert-butyl n-[(3-amino-4-fluorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC=C(F)C(N)=C1 ZESPVVPBNKPRRE-UHFFFAOYSA-N 0.000 description 1
- WYOKRGYMESLVQB-UHFFFAOYSA-N tert-butyl n-[(3-carbamoyl-4-fluorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC=C(F)C(C(N)=O)=C1 WYOKRGYMESLVQB-UHFFFAOYSA-N 0.000 description 1
- PDKYTVXSSOLJGJ-UHFFFAOYSA-N tert-butyl n-[(4-amino-2,5-difluorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC(F)=C(N)C=C1F PDKYTVXSSOLJGJ-UHFFFAOYSA-N 0.000 description 1
- FWADADMZZLUECL-UHFFFAOYSA-N tert-butyl n-[(4-amino-2-chlorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC=C(N)C=C1Cl FWADADMZZLUECL-UHFFFAOYSA-N 0.000 description 1
- FMTUFNCQKOLKON-UHFFFAOYSA-N tert-butyl n-[(4-amino-3-chlorophenyl)methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC=C(N)C(Cl)=C1 FMTUFNCQKOLKON-UHFFFAOYSA-N 0.000 description 1
- FIEVJXFYSNFUGV-UHFFFAOYSA-N tert-butyl n-[[4-amino-2-(trifluoromethyl)phenyl]methyl]carbamate Chemical compound CC(C)(C)OC(=O)NCC1=CC=C(N)C=C1C(F)(F)F FIEVJXFYSNFUGV-UHFFFAOYSA-N 0.000 description 1
- 150000003512 tertiary amines Chemical class 0.000 description 1
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 1
- WHRNULOCNSKMGB-UHFFFAOYSA-N tetrahydrofuran thf Chemical compound C1CCOC1.C1CCOC1 WHRNULOCNSKMGB-UHFFFAOYSA-N 0.000 description 1
- RAOIDOHSFRTOEL-UHFFFAOYSA-N tetrahydrothiophene Chemical compound C1CCSC1 RAOIDOHSFRTOEL-UHFFFAOYSA-N 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 1
- 231100001274 therapeutic index Toxicity 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
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- JOXIMZWYDAKGHI-UHFFFAOYSA-N toluene-4-sulfonic acid Chemical compound CC1=CC=C(S(O)(=O)=O)C=C1 JOXIMZWYDAKGHI-UHFFFAOYSA-N 0.000 description 1
- 229960002190 topotecan hydrochloride Drugs 0.000 description 1
- CFOAUYCPAUGDFF-UHFFFAOYSA-N tosmic Chemical compound CC1=CC=C(S(=O)(=O)C[N+]#[C-])C=C1 CFOAUYCPAUGDFF-UHFFFAOYSA-N 0.000 description 1
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- 238000013518 transcription Methods 0.000 description 1
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- 125000004306 triazinyl group Chemical group 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- WARKYKQCOXTIAO-UHFFFAOYSA-N tributyl(2-ethoxyethenyl)stannane Chemical compound CCCC[Sn](CCCC)(CCCC)\C=C/OCC WARKYKQCOXTIAO-UHFFFAOYSA-N 0.000 description 1
- 125000003866 trichloromethyl group Chemical group ClC(Cl)(Cl)* 0.000 description 1
- 229910052905 tridymite Inorganic materials 0.000 description 1
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 1
- 230000001960 triggered effect Effects 0.000 description 1
- 229960000281 trometamol Drugs 0.000 description 1
- 229960003048 vinblastine Drugs 0.000 description 1
- GBABOYUKABKIAF-IELIFDKJSA-N vinorelbine Chemical compound C1N(CC=2C3=CC=CC=C3NC=22)CC(CC)=C[C@H]1C[C@]2(C(=O)OC)C1=CC([C@]23[C@H]([C@@]([C@H](OC(C)=O)[C@]4(CC)C=CCN([C@H]34)CC2)(O)C(=O)OC)N2C)=C2C=C1OC GBABOYUKABKIAF-IELIFDKJSA-N 0.000 description 1
- 229960002066 vinorelbine Drugs 0.000 description 1
- CILBMBUYJCWATM-PYGJLNRPSA-N vinorelbine ditartrate Chemical compound OC(=O)[C@H](O)[C@@H](O)C(O)=O.OC(=O)[C@H](O)[C@@H](O)C(O)=O.C1N(CC=2C3=CC=CC=C3NC=22)CC(CC)=C[C@H]1C[C@]2(C(=O)OC)C1=CC([C@]23[C@H]([C@@]([C@H](OC(C)=O)[C@]4(CC)C=CCN([C@H]34)CC2)(O)C(=O)OC)N2C)=C2C=C1OC CILBMBUYJCWATM-PYGJLNRPSA-N 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 239000000080 wetting agent Substances 0.000 description 1
- 229940053867 xeloda Drugs 0.000 description 1
- 239000002676 xenobiotic agent Substances 0.000 description 1
- 230000002034 xenobiotic effect Effects 0.000 description 1
- 229950000339 xinafoate Drugs 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D487/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
- C07D487/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
- C07D487/10—Spiro-condensed systems
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
- C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
- C07D471/10—Spiro-condensed systems
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
- A61K31/47—Quinolines; Isoquinolines
- A61K31/4747—Quinolines; Isoquinolines spiro-condensed
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
- A61K45/06—Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
- A61P35/02—Antineoplastic agents specific for leukemia
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
- C07F9/6561—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing systems of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring or ring system, with or without other non-condensed hetero rings
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K2300/00—Mixtures or combinations of active ingredients, wherein at least one active ingredient is fully defined in groups A61K31/00 - A61K41/00
Definitions
- the present invention relates to novel tricyclic compounds that are useful as AKR1C3 dependent KARS inhibitors.
- the present invention also relates to processes for the preparation of said compounds, pharmaceutical compositions comprising said compounds, methods of using said compounds in the treatment of various diseases and disorders, and medicaments containing them, and their use in diseases and disorders mediated by an AKR1C3 dependent KARS inhibitor.
- the NFE2L2/NRF2-KEAP1 pathway has a strong genetic basis in cancer.
- the TCGA sequencing effort reported that this pathway was altered in 34% of lung squamous cell carcinomas (Hammerman PS et al. Comprehensive genomic characterization of squamous cell lung cancers. Nature 489, 519– 525 (2012)).
- TCGA and other groups have reported significant mutation of this pathway in other solid tumor indications, including head and neck squamous cell carcinoma and hepatocellular carcinoma.
- Aberrant activation of the NRF2 pathway can occur by gain of function genetic alterations in NRF2 or loss of function genetic alterations in KEAP1 or CUL3 that lead to stabilization of NRF2 and elevated expression of its target genes.
- Aldehyde keto reductase 1C3 is one of the numerous target genes of the transcription factor NRF2, whose expression is upregulated in NRF2/KEAP1 mutated cancers (MacLeod AK, Acosta-Jimenez L, Coates PJ, McMahon M, Carey FA, Hyundai T, Henderson CJ and Wolf CR. Aldo- keto reductases are biomarkers of NRF2 activity and are coordinately overexpressed in non-small cell lung cancer. Br J Cancer 115, 1530–1539 (2016)).
- AKR1C3 (also named type 2 3a(17b)- hydroxysteroid dehydrogenase) is an NADP(H)-dependent ketosteroid reductase, member of the aldo-keto reductase (AKR) superfamily, that plays a role in steroid hormone metabolism and signaling, as well as xenobiotic detoxification.
- Some known substrates for AKR1C3 are the endogenous substrates 5a-dihydrotestosterone, D4-androstene-3,17-dione and progesterone (Penning TM, Burczynski ME, Jez JM, Hung CF, Lin HK, Ma H, Moore M, Palackal N, Ratnam K.
- PR104 Jamieson SM, Gu Y, Manesh DM, El-Hoss J, Jing D, Mackenzie KL, Guise CP, Foehrenbacher A, Pullen SM, Benito J, Smaill JB, Patterson AV, Mulaw MA, Konopleva M, Bohlander SK, Lock RB, Wilson WR.
- a novel fluorometric assay for aldo-keto reductase 1C3 predicts metabolic activation of the nitrogen mustard prodrug PR-104A in human leukaemia cells. Biochem Pharmacol.88, 36-45 (2014)) and TH3424/OBI3424 (Threshold pharmaceuticals WO 2016/145092 A1).
- Lysine t-RNA synthetase is a ubiquitous enzyme essential for protein synthesis that is part of the multi-tRNA synthetase complex.
- AKR1C3 dependent KARS inhibitors provide an attractive strategy to selectively treat tumors that overexpress AKR1C3 compared to normal tissues, such as NRF2/KEAP1 mutated cancers and other types of cancers reported to overexpress AKR1C3 (Guise CP, Abbattista MR, Singleton RS, Holford SD, Connolly J, Dachs GU, Fox SB, Pollock R, Harvey J, Guilford P, Do ⁇ ate F, Wilson WR, Patterson AV.
- the bioreductive prodrug PR-104A is activated under aerobic conditions by human aldo-keto reductase 1C3.
- AKR1C3 dependent KARS inhibitors provides new treatments and therapies for patients suffering from cancers with genetic alterations on the NRF2/KEAP1 pathway.
- the invention provides compounds, pharmaceutically acceptable salts thereof, pharmaceutical compositions thereof and combinations thereof, which compounds are AKR1C3 dependent KARS inhibitors that get converted to lysine t-RNA synthetase (KARS) inhibitors by AKR1C3 in the presence of NADPH.
- Lysine t-RNA synthetase is a ubiquitous enzyme essential for protein synthesis that is part of the multi-tRNA synthetase complex.
- the invention further provides methods of treating, or preventing diseases and/or disorders related to high AKR1C3 expression or sensitivity to KARS inhibition, comprising administering to a subject in need thereof an effective amount of an AKR1C3 dependent KARS inhibitor.
- Various embodiments of the invention are described herein.
- Z is either OH, when is a single bond; or O, when s a double bond;
- each R 1 is independently selected from the group consisting of, (C 1 -C 6 )alkyl, (C 1 -C 6 )alkoxy, (C 0 - C 4 )alkylN(R 8 ) 2 , and halo;
- R 2a and R 2b are each independently selected from the group consisting of H, (C 1 -C 6 ) alkyl, and halo;
- each R 3 is independently selected from the group consisting of H, , and halo;
- R 4 is selected from the group consisting of aryl, a 5 to 6-membered heteroaryl comprising 1, 2, 3, or 4 heteroatoms independently selected from N, O, and S; and a 9 to 10-membered fused bicyclic heteroaryl comprising 1, 2, 3, or 4 heteroatoms independently selected from N, O, and S; wherein any of the foregoing is optionally substituted with one or more R 6 ;
- R 5 is selected from the group consisting of H; (C 1 -C 6
- each R 12 is independently selected from the group consisting of OH, (C 1 -C 3 )alkoxy, NH 2 ; or (C 1 - C 3 )alkyl optionally substituted with one or more OH; each R 13 is independently selected from the group consisting of halo, OH, amino, (C 1- C 4 )alkylamino, di(C 1- C 4 )alkylamino, (C 1 -C 3 )alkoxy; and C(O)-(C 3 -C 8 )cycloalkyl; m is 0, 1, or 2; and
- n 0, 1 or 2.
- the invention provides a pharmaceutical composition comprising a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable carriers.
- the invention provides a combination, in particular a pharmaceutical combination comprising a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof, and one or more therapeutic agents.
- compounds of the present invention are combined with other therapeutic agents, such as other anti-cancer agents, anti-nausea agents (or anti-emetics), a chemotherapy, pain relievers, cytoprotective agents, and combinations thereof.
- chemotherapeutic agents considered for use in combination therapies include anastrozole (Arimidex®), bicalutamide (Casodex®), bleomycin sulfate (Blenoxane®), busulfan (Myleran®), busulfan injection (Busulfex®), capecitabine (Xeloda®), N4-pentoxycarbonyl-5-deoxy-5- fluorocytidine, carboplatin (Paraplatin®), carmustine (BiCNU®), chlorambucil (Leukeran®), cisplatin (Platinol®), cladribine (Leustatin®), cyclophosphamide (Cytoxan® or Neosar®), cytarabine, cytosine arabinoside (Cytosar-U®), cytarabine liposome injection (DepoCyt®), dacarbazine (DTIC-Dome®), dactinomycin
- the invention provides a method of modulating KARS activity in a subject in need thereof, the method comprises administering to the subject in need thereof a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof.
- the invention also provides a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof, for use in the treatment, or prevention of cancer, wherein the cancer is selected from non-small cell lung cancer (NSCLC), liver cancer, head and neck cancer, esophageal cancer, uterine cancer, breast cancer, bladder cancer, cervical cancer, colorectal cancer, kidney cancer, melanoma, stomach, castration-resistant prostate cancer (CRPC), T-cell acute lymphoblastic leukemia (T-ALL), acute myeloid leukemia (AML), and myelodysplastic syndrome (MDS).
- NSCLC non-small cell lung cancer
- T-ALL T-cell acute lymphoblastic leukemia
- AML acute myeloid leukemia
- MDS
- the invention also provides a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof, for use in the treatment, or prevention of cancer with genetic or epigenetic alteration in the genes NFE2L2, KEAP1, CUL3, AKR1C3, or any other condition resulting in the activation of NRF2 transcriptional activity or AKR1C3 gene expression.
- the invention also provides a compound of formula (I), or subformulae thereof, or a pharmaceutically acceptable salt thereof, for use in the treatment, or prevention of cancer with an AKR1C3 overexpression that is higher than a predetermined value.
- FIG. 1 illustrates the kinetic conversion of Compound 40 to Compound 152 in the presence of AKR1C3
- FIG. 2 illustrates dose dependent in vivo efficacy of Compound 40 in high AKR1C3 expressing human lung cancer xenograft NCI-H1944
- FIG. 3 illustrates dose dependent in vivo efficacy of Compound 40 in the KEAP1 mutant and moderately AKR1C3 expressing human lung cancer xenograft NCI-H1944 and NCI-H460 DETAILED DESCRIPTION OF THE INVENTION
- the invention therefore provides a compound of Formula (I): or a pharmaceutically acceptable salt thereof:
- Z is either OH, when is a single bond; or O, when is a double bond;
- each R 1 is independently selected from the group consisting of, (C 1 -C 6 )alkyl, (C 1 -C 6 )alkoxy, (C 0 - C 4 )alkylN(R 8 ) 2 , and halo;
- R 2a and R 2b are each independently selected from the group consisting of H, (C 1 -C 6 ) alkyl, and halo;
- each R 3 is independently selected from the group consisting of H, , and halo;
- R 4 is selected from the group consisting of aryl, a 5 to 6-membered heteroaryl comprising 1, 2, 3, or 4 heteroatoms independently selected from N, O, and S; and a 9 to 10-membered fused bicyclic heteroaryl comprising 1, 2, 3, or 4 heteroatoms independently selected from N, O, and S; wherein any of the foregoing is optionally substituted with one or more R 6 ;
- R 5 is selected from the group consisting of H; (C 1 -C 6
- each R 12 is independently selected from the group consisting of OH, (C 1 -C 3 )alkoxy, NH 2 ; or (C 1 - C 3 )alkyl optionally substituted with one or more OH; each R 13 is independently selected from the group consisting of halo, OH, amino, (C 1- C 4 )alkylamino, di(C 1- C 4 )alkylamino, (C 1 -C 3 )alkoxy; and C(O)-(C 3 -C 8 )cycloalkyl; m is 0, 1, or 2; and
- n 0, 1 or 2.
- (C 1- C 4 )alkyl is to be construed accordingly.
- Examples of (C 1- C 6 )alkyl include, but are not limited to, methyl, ethyl, n-propyl, 1-methylethyl (iso-propyl), n-butyl, n-pentyl and 1,1-dimethylethyl (t-butyl).
- (C 2- C 6 )alkenyl refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one double bond, having from two to six carbon atoms, which is attached to the rest of the molecule by a single bond.
- (C 2- C 4 )alkenyl is to be construed accordingly.
- Examples of (C 2- C 6 )alkenyl include, but are not limited to, ethenyl, prop-1-enyl, but-1-enyl, pent-1-enyl, pent-4-enyl and penta-1,4-dienyl.
- the term“(C 2- C 6 )alkynyl” refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one triple bond, having from two to six carbon atoms, and which is attached to the rest of the molecule by a single bond.
- (C 2- C 4 )alkynyl is to be construed accordingly.
- Examples of (C 2- C 6 )alkynyl include, but are not limited to, ethynyl, prop-1-ynyl, but-1-ynyl, pent-1-ynyl, pent-4-ynyl and penta-1,4-diynyl.
- (C 1- C 6 )alkoxy refers to a radical of the formula -OR a where R a is a (C 1- C 6 )alkyl radical as generally defined above.
- Examples of (C 1- C 6 )alkoxy include, but are not limited to, methoxy, ethoxy, propoxy, isopropoxy, butoxy, isobutoxy, pentoxy, and hexoxy.
- the term "(C 1- C 6 )alkoxy(C 1- C 6 )alkyl " refers to a radical of the formula -R a -O-R a where each R a is independently a (C 1- C 6 )alkyl radical as defined above.
- the oxygen atom may be bonded to any carbon atom in either alkyl radical.
- Examples of (C 1- C 6 )alkoxy(C 1- C 6 )alkyl include, but are not limited to, methoxy-methyl, methoxy-ethyl, ethoxy-ethyl, 1-ethoxy-propyl and 2-methoxy-butyl.
- the carbon atom of the carbonyl group may be bonded to any carbon atom in either alkyl radical.
- hydroxy(C 1- C 6 )alkyl refers to a (C 1- C 6 )alkyl radical as defined above, wherein one of the hydrogen atoms of the C 1-6 alkyl radical is replaced by OH.
- hydroxy(C 1- C 6 )alkyl include, but are not limited to, hydroxy-methyl, 2-hydroxy-ethyl, 2-hydroxy- propyl, 3-hydroxy-propyl and 5-hydroxy-pentyl.
- amino(C 1- C 6 )alkyl refers to a (C 1- C 6 )alkyl radical as defined above, wherein one of the hydrogen atoms of the (C 1- C 6 )alkyl group is replaced by a primary amino group.
- Representative examples of amino(C 1- C 6 )alkyl include, but are not limited to, amino-methyl, 2-amino- ethyl, 2-amino-propyl, 3-amino-propyl, 3-amino-pentyl and 5-amino-pentyl.
- (C 1- C 4 )alkylamino refers to a radical of the formula -NH-R a where R a is a (C 1- C 4 )alkyl radical as defined above.
- (C 1- C 4 )alkylamino(C 1- C 6 )alkyl refers to a radical of the formula -R a1 -NH- R a2 where R a1 is a (C 1- C 6 )alkyl radical as defined above and R a2 is a (C 1- C 4 )alkyl radical as defined above.
- the nitrogen atom may be bonded to any carbon atom in either alkyl radical.
- di(C 1- C 4 )alkylamino refers to a radical of the formula -N(R a )-R a where each R a is a (C 1- C 4 )alkyl radical, which may be the same or different, as defined above.
- di(C 1- C 4 )alkylamino(C 1- C 6 )alkyl refers to a radical of the formula -R a1 - N(R a2 )-R a2 where R a1 is a (C 1- C 6 )alkyl radical as defined above and each R a2 is a (C 1- C 4 )alkyl radical, which may be the same or different, as defined above.
- the nitrogen atom may be bonded to any carbon atom in any alkyl radical.
- (C 3- C 8 )cycloalkyl(C 0- C 6 )alkyl refers to a stable monocyclic saturated hydrocarbon radical consisting solely of carbon and hydrogen atoms, having from three to eight carbon atoms, and which is attached to the rest of the molecule by a single bond or by a (C 1- C 6 )alkyl radical as defined above.
- Examples of (C 3- C 8 )cycloalkyl(C 0- C 6 )alkyl include, but are not limited to, cyclopropyl, cyclopropyl-methyl, cyclobutyl, cyclobutyl-ethyl, cyclopentyl, cyclopentyl-propyl, cyclohexyl, cyclohepty and cyclooctyl.
- the term“aryl” refers to 6- to 10-membered aromatic carbocyclic moieties having a single (e.g., phenyl) or a fused ring system (e.g., naphthalene.).
- a typical aryl group is phenyl group.
- phenyl(C 0- C 6 )alkyl refers to a phenyl ring attached to the rest of the molecule by a single bond or by a (C 1- C 6 )alkyl radical as defined above.
- phenyl(C 0- C 6 )alkyl include, but are not limited to, phenyl and benzyl.
- phenyl(C 0- C 6 )alkylamino(C 1- C 6 )alkyl refers to a radical of the formula–R a - NH-R b where R a is a (C 1- C 6 )alkyl radical as defined above and R b is a phenyl(C 0- C 6 )alkyl radical as defined above.
- phenyl(C 0- C 6 )alkylamino((C 1- C 4 )alkyl) (C 1- C 6 )alkyl refers to a radical of the formula–R a1 -N(R a2 )-R b where R a1 is a (C 1- C 6 )alkyl radical as defined above, R a2 is a (C 1- C 4 )alkyl radical as defined above and R b is a phenyl(C 0- C 6 )alkyl radical as defined above.
- halo refers to bromo, chloro, fluoro or iodo.
- halo(C 1- C 6 )alkyl refers to (C 1- C 6 )alkyl radical, as defined above, substituted by one or more halo radicals, as defined above.
- halogen(C 1- C 6 )alkyl include, but are not limited to, trifluoromethyl, difluoromethyl, fluoromethyl, trichloromethyl, 2,2,2- trifluoroethyl, 1,3-dibromopropan-2-yl, 3-bromo-2-fluoropropyl and 1,4,4-trifluorobutan-2-yl.
- heterocyclyl referts to a saturated or partially saturated, but not aromatic, ring or ring systems, which include a monocyclic ring, fused rings, bridged rings and spirocyclic rings having the specified number of ring atoms.
- heterocyclyl includes, but not limited to, 5- to 6- membered heterocyclyl, 4- to 10-membered heterocyclyl, 4- to 14-membered heterocyclyl and 5- to 14-membered heterocyclyl.
- the heterocyclyl contain 1 to 7, 1 to 5, 1 to 3, or 1 to 2 heteroatoms independently selected from the group consisting of nitrogen, oxygen and sulphur as ring members, where the N and S can also optionally be oxidized to various oxidation states.
- the heterocyclic group can be attached at a heteroatom or a carbon atom.
- heterocyclyl examples include, but are not limited to, azetidine, oxetane, piperidine, piperazine, pyrroline, pyrrolidine, imidazolidine, imidazoline, morpholine, tetrahydrofuran, tetrahydrothiophene, tetrahydrothiopyran, tetrahydropyran, 1,4-dioxane, 1,4 oxathiane, hexahydropyrimidinyl, 3- azabicyclo[3.1.0]hexane, azepane, 3-azabicyclo[3.2.2]nonane, decahydroisoquinoline, 2- azaspiro[3.3]heptane, 2-oxa-6-azaspiro[3.3]heptane, 2,6-diazaspiro[3.3]heptane, 8-aza- bicyclo[3.2.1]octane, 3,8-diazabicyclo[3.
- fused heterocyclyl referts to a heterocyclyl, as defined above, which is fused to an aryl (e.g., phenyl) or a heteroaryl ring as defined above.
- fused heterocyclyl include, but are not limited to, 1,2,3,4-tetrahydroisoquinoline, indoline, isoindoline, 1,2,3,4-tetrahydro-2,7- naphthyridine, 5,6,7,8-tetrahydro-1,7-naphthyridine, 1,2,3,4-tetrahydro-2,6-naphthyridine, 5,6,7,8- tetrahydro-1,6-naphthyridine, 2,3,4,5-tetrahydro-1H-benzo[d]azepine, 1,2,3,4-tetrahydro-1,4- epiminonaphthalene, 2,3-dihydrobenzofurane, 5,6,7,
- heterocyclyl(C 0- C 6 )alkyl refers to a heterocyclic ring as defined above which is attached to the rest of the molecule by a single bond or by a (C 1- C 6 )alkyl radical as defined above.
- heteroaryl refers to aromatic moieties containing at least one heteroatom (e.g., oxygen, sulfur, nitrogen or combinations thereof) within a 5- to 10-membered aromatic ring system (e.g., pyrrolyl, pyridyl, pyrazolyl, indolyl, indazolyl, thienyl, furanyl, benzofuranyl, oxazolyl, isoxazolyl, imidazolyl, triazolyl, tetrazolyl, triazinyl, pyrimidinyl, pyrazinyl, thiazolyl, purinyl, benzimidazolyl, quinolinyl, isoquinolinyl, quinoxalinyl, benzopyranyl, benzothiophenyl, benzoimidazolyl, benzoxazolyl, 1H-benzo[d][1,2,3]triazolyl, and the like.).
- heteroatom e.g., oxygen
- the heteroaromatic moiety may consist of a single or fused ring system.
- a typical single heteroaryl ring is a 5- to 6-membered ring containing one to three heteroatoms independently selected from oxygen, sulfur and nitrogen and a typical fused heteroaryl ring system is a 9- to 10-membered ring system containing one to four heteroatoms independently selected from oxygen, sulfur and nitrogen.
- the fused heteroaryl ring system may consist of two heteroaryl rings fused together or a hetereoaryl fused to an aryl (e.g., phenyl).
- aryl e.g., phenyl
- heteroaryl(C 0- C 6 )alkyl refers to a heteroaryl ring as defined above which is attached to the rest of the molecule by a single bond or by a (C 1- C 6 )alkyl radical as defined above.
- the term“compounds of the present invention” refers to compounds of formula (I), and subformulae thereof, such as compounds of formula (II), (III), and (IV), as defined herein, and salts thereof, as well as all stereoisomers (including diastereoisomers and enantiomers), rotamers, tautomers and isotopically labeled compounds (including deuterium substitutions), as well as inherently formed moieties.
- the term “compounds of the (present) invention” or "a compound of the (present) invention” refers to a compound as defined in any one of the embodiments mentioned below.
- the invention provides a compound of formula (I), or a pharmaceutically acceptable salt thereof, as described above.
- the invention provides a compound of emobidment 1, wherein R 4 is phenyl optionally substituted with one or more R 6 .
- the invention provides a compound of embodiment 1, wherein R 4 is 5 to 6- membered heteroaryl optionally substituted with one or more R 6 .
- the invention provides a compound of embodiment 3, wherein R 4 is pyridyl.
- the invention provides a compound of embodiment 3, wherein R 4 is selected from the group consisting of furyl, oxazolyl, pyrazolyl, isoxazolyl, thiophenyl, imidazolyl, and oxadiazolyl.
- R 4 is selected from the group consisting of furyl, oxazolyl, pyrazolyl, isoxazolyl, thiophenyl, imidazolyl, and oxadiazolyl.
- the invention provides a compound of embodiment 2, being of formula (II),
- the invention provides a compound of embodiment 1, being of formula (III),
- ring A is a 5-membered heteroaryl
- u, v, w, and x are each independently selected from the group CH, O, S, N, and NH, provided that at least one of u, v, w, and x is O, S, N or NH.
- the invention provides a compound of any one of embodiments 1, 3, 5, or 7, wherein n is 1 or 2;
- R 4 is optionally substituted with one to three R 6 .
- the invention provides a compound of any one of embodiments 1-8, wherein n is 1 or 2, and at least one R 1 is halo.
- the invention provides a compound of any one of embodiments 1-9, wherein n is 1 or 2, and at least one R 1 is F.
- the invention provides a compound of any one of embodiments 1-10, wherein n is 1.
- the invention provides a compound of any one of embodiments 1-11, wherein Z is O.
- the invention provides a compound of any one of embodiments 1-12, wherein R 2a and R 2b are each H.
- the invention provides a compound of any one of embodiments 1-13, wherein R 5 is H; (C 1 -C 6 )alkyl; (C 2 -C 6 )alkenyl; or (C 0 -C 4 )alkylOR 8 .
- the invention provides a compound of any one of embodiments 1-14, wherein R 5 is H or (C 1 -C 2 )alkyl.
- the invention provides a compound of any one of embodiments 1-15, wherein R 5 is H.
- the invention provides a compound of any one of embodiments 1-16, wherein each R 3 is H.
- the invention provides a compound of any one of embodiments 1-17, wherein each R 3 is deuterium.
- the invention provides a compound of any one of embodiments 1-18, wherein each R 6 is independently selected from halo and (C 0 -C 4 )alkylN(R 8 ) 2.
- the invention provides a compound of any one of embodiments 1-19, wherein R 6 is halo.
- the invention provides a compound of embodiment 1, wherein the compound is selected from:
- the invention provides a compound of embodiment 2, wherein the compound is selected from: 6'-fluoro-N-(4-fluoro-2-methoxybenzyl)-1'-methyl-4'-oxo-3',4'-dihydro-1'H-spiro[piperidine-4,2'- quinoline]-1-carboxamide;
- the invention provides a compound of embodiment 5, wherein the compound is selected from: 6'-fluoro-N-((5-methylfuran-2-yl)methyl)-4'-oxo-3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1- carboxamide;
- the invention provides a pharmaceutical composition comprising a compound according to any one of embodiments 1 to 23, and one or more pharmaceutically acceptable carriers.
- the invention provides a pharmaceutical combination comprising a compound of any one of embodiments 1 to 23, or a pharmaceutically acceptable salt thereof, and one or more therapeutic agents.
- the invention provides a compound according to any one of embodiments 1 to 23, for use as a medicament, in particular for treating, or preventing an KARS mediated disease or condition.
- the invention provides a compound according to any one of embodiments 1 to 23, for use in the treatment, or prevention of cancer, wherein the method comprises administering to the subject the compound of formulae (I) to (III), or a pharmaceutically acceptable salt thereof, according to any one of embodiments 1 to 7.
- the invention provides a compound according to claim 23, wherein the cancer is selected from non-small cell lung cancer (NSCLC), liver cancer, head and neck cancer, esophageal cancer, uterine cancer, breast cancer, bladder cancer, cervical cancer, colorectal cancer, kidney cancer, melanoma, stomach, castration-resistant prostate cancer (CRPC), T-cell acute lymphoblastic leukemia (T-ALL), acute myeloid leukemia (AML), and myelodysplastic syndrome (MDS), wherein the method comprises administering to the subject the compound of formulae (I) to (III), or a pharmaceutically acceptable salt thereof, according to any one of embodiments 1 to 7.
- NSCLC non-small cell lung cancer
- esophageal cancer uterine cancer
- breast cancer bladder cancer
- cervical cancer cervical cancer
- colorectal cancer kidney cancer
- melanoma stomach
- CRPC castration-resistant prostate cancer
- T-ALL T-cell acute lymphoblastic leukemia
- AML acute myeloid le
- the invention provides a compound according to embodiment 28, wherein the non-small cell lung cancer (NSCLC) is selected from adenocarcinoma, squamous cell carcinoma, large cell carcinoma, large cell neuroendocrine carcinoma, adenosquamous carcinoma, and sarcomatoid carcinoma.
- NSCLC non-small cell lung cancer
- the invention provides a compound according to any one of embodiments 1 to 23, for use in the treatment, or prevention of cancer with genetic or epigenetic alteration in the genes NFE2L2, KEAP1, CUL3, AKR1C3, or any other condition resulting in the activation of NRF2 transcriptional activity or AKR1C3 gene expression.
- the invention provides a compound according to any embodiments 1 to 23, for use in the treatment, or prevention of cancer with an AKR1C3 overexpression that is higher than a predetermined value.
- the compounds can be present in the form of one of the possible stereoisomers, or as mixtures thereof, for example as pure optical isomers, or as stereoisomer mixtures, such as racemates and diastereoisomer mixtures, depending on the number of asymmetric carbon atoms.
- the present invention is meant to include all such possible stereoisomers, including racemic mixtures, diasteriomeric mixtures and optically pure forms.
- Optically active (R)- and (S)- stereoisomers may be prepared using chiral synthons or chiral reagents, or resolved using conventional techniques. If the compound contains a double bond, the substituent may be (E) or (Z) configuration. If the compound contains a disubstituted cycloalkyl, the cycloalkyl substituent may have a cis- or trans-configuration. All tautomeric forms are also intended to be included.
- the terms“salt” or“salts” refer to an acid addition or base addition salt of a compound of the invention.“Salts” include in particular “pharmaceutically acceptable salts”.
- pharmaceutically acceptable salts refers to salts that retain the biological effectiveness and properties of the compounds of this invention and which typically are not biologically or otherwise undesirable.
- the compounds of the present invention are capable of forming acid and/or base salts by virtue of the presence of amino and/or carboxyl groups or groups similar thereto.
- Pharmaceutically acceptable acid addition salts can be formed with inorganic acids and organic acids. Inorganic acids from which salts can be derived include, for example, hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, and the like.
- Organic acids from which salts can be derived include, for example, acetic acid, propionic acid, glycolic acid, oxalic acid, maleic acid, malonic acid, succinic acid, fumaric acid, tartaric acid, citric acid, benzoic acid, mandelic acid, methanesulfonic acid, ethanesulfonic acid, toluenesulfonic acid, sulfosalicylic acid, and the like.
- Pharmaceutically acceptable base addition salts can be formed with inorganic and organic bases.
- Inorganic bases from which salts can be derived include, for example, ammonium salts and metals from columns I to XII of the periodic table.
- the salts are derived from sodium, potassium, ammonium, calcium, magnesium, iron, silver, zinc, and copper; particularly suitable salts include ammonium, potassium, sodium, calcium and magnesium salts.
- Organic bases from which salts can be derived include, for example, primary, secondary, and tertiary amines, substituted amines including naturally occurring substituted amines, cyclic amines, basic ion exchange resins, and the like. Certain organic amines include isopropylamine, benzathine, cholinate, diethanolamine, diethylamine, lysine, meglumine, piperazine and tromethamine.
- the present invention provides compounds of any one of formulae (I) to (IV), according to any one of embodiments 1 to 5, in acetate, ascorbate, adipate, aspartate, benzoate, besylate, bromide/hydrobromide, bicarbonate/carbonate, bisulfate/sulfate, camphorsulfonate, caprate, chloride/hydrochloride, chlortheophyllonate, citrate, ethandisulfonate, fumarate, gluceptate, gluconate, glucuronate, glutamate, glutarate, glycolate, hippurate, hydroiodide/iodide, isethionate, lactate, lactobionate, laurylsulfate, malate, maleate, malonate, mandelate, mesylate, methylsulphate, mucate, naphthoate, napsylate, nicotinate, nitrate, octadecanoate
- the present invention provides compounds of any one of formulae (I) to (IV), in sodium, potassium, ammonium, calcium, magnesium, iron, silver, zinc, copper, isopropylamine, benzathine, cholinate, diethanolamine, diethylamine, lysine, meglumine, piperazine or tromethamine salt form.
- Any formula given herein is also intended to represent unlabeled forms as well as isotopically labeled forms of the compounds. lsotopically labeled compounds have structures depicted by the formulas given herein except that one or more atoms are replaced by an atom having a selected atomic mass or mass number.
- Isotopes that can be incorporated into compounds of the invention include, for example, isotopes of hydrogen. Further, incorporation of certain isotopes, particularly deuterium (i.e., 2 H or D) may afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half- life or reduced dosage requirements or an improvement in therapeutic index or tolerability. It is understood that deuterium in this context is regarded as a substituent of a compound of the formula (I). The concentration of deuterium, may be defined by the isotopic enrichment factor.
- isotopic enrichment factor as used herein means the ratio between the isotopic abundance and the natural abundance of a specified isotope.
- a substituent in a compound of this invention is denoted as being deuterium, such compound has an isotopic enrichment factor for each designated deuterium atom of at least 3500 (52.5% deuterium incorporation at each designated deuterium atom), at least 4000 (60% deuterium incorporation), at least 4500 (67.5% deuterium incorporation), at least 5000 (75% deuterium incorporation), at least 5500 (82.5% deuterium incorporation), at least 6000 (90% deuterium incorporation), at least 6333.3 (95% deuterium incorporation), at least 6466.7 (97% deuterium incorporation), at least 6600 (99% deuterium incorporation), or at least 6633.3 (99.5% deuterium incorporation).
- isotopic enrichment factor can be applied to any isotope in the same manner as described for deuterium.
- isotopes that can be incorporated into compounds of the invention include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine, and chlorine, such as 3 H, 11 C, 13 C, 14 C, 15 N, 18 F 31 P, 32 P, 35 S, 36 Cl, 123 I, 124 I, 125 I, respectively.
- the invention includes compounds that incorporate one or more of any of the aforementioned isotopes, including for example, radioactive isotopes, such as 3 H and 14 C, or those into which non-radioactive isotopes, such as 2 H and 13 C are present.
- isotopically labelled compounds are useful in metabolic studies (with 14 C), reaction kinetic studies (with, for example 2 H or 3 H), detection or imaging techniques, such as positron emission tomography (PET) or single- photon emission computed tomography (SPECT) including drug or substrate tissue distribution assays, or in radioactive treatment of patients.
- PET positron emission tomography
- SPECT single- photon emission computed tomography
- an 18 F or labeled compound may be particularly desirable for PET or SPECT studies.
- Isotopically-labeled compounds of formula (I) can generally be prepared by conventional techniques known to those skilled in the art or by processes analogous to those described in the accompanying Examples and Preparations using an appropriate isotopically-labeled reagent in place of the non-labeled reagent previously employed.
- the term“pharmaceutical composition” refers to a compound of the invention, or a pharmaceutically acceptable salt thereof, together with at least one pharmaceutically acceptable carrier, in a form suitable for oral or parenteral administration.
- pharmaceutically acceptable carrier refers to a substance useful in the preparation or use of a pharmaceutical composition and includes, for example, suitable diluents, solvents, dispersion media, surfactants, antioxidants, preservatives, isotonic agents, buffering agents, emulsifiers, absorption delaying agents, salts, drug stabilizers, binders, excipients, disintegration agents, lubricants, wetting agents, sweetening agents, flavoring agents, dyes, and combinations thereof, as would be known to those skilled in the art (see, for example, Remington The Science and Practice of Pharmacy, 22 nd Ed.
- a therapeutically effective amount of a compound of the present invention refers to an amount of the compound of the present invention that will elicit the biological or medical response of a subject, for example, reduction or inhibition of an enzyme or a protein activity, or ameliorate symptoms, alleviate conditions, slow or delay disease progression, or prevent a disease, etc.
- the term“a therapeutically effective amount” refers to the amount of the compound of the present invention that, when administered to a subject, is effective to (1) at least partially alleviate, inhibit, prevent and/or ameliorate a condition, or a disorder or a disease (i) mediated by KARS, or (ii) disease sensitive to KARS inhibition, or (iii) characterized by activity (normal or abnormal) of KARS; or (2) reduce or inhibit disease sensitive to KARS inhibition.
- the invention further provides methods of treating, or preventing diseases and/or disorders related to high AKR1C3 expression or sensitivity to KARS inhibition, comprising administering to a subject in need thereof an effective amount of an AKR1C3 dependent KARS inhibitor.
- the term“subject” refers to primates (e.g., humans, male or female), monkeys, dogs, rabbits, guinea pigs, pigs, rats and mice. In certain embodiments, the subject is a primate. In yet other embodiments, the subject is a human.
- the term“inhibit”, “inhibition” or“inhibiting” refers to the reduction or suppression of a given condition, symptom, or disorder, or disease, or a significant decrease in the baseline activity of a biological activity or process.
- the term“treat”,“treating” or “treatment” of any disease or disorder refers to alleviating or ameliorating the disease or disorder (i.e., slowing or arresting the development of the disease or at least one of the clinical symptoms thereof); or alleviating or ameliorating at least one physical parameter or biomarker associated with the disease or disorder, including those which may not be discernible to the patient.
- the term“prevent”,“preventing” or“prevention” of any disease or disorder refers to the prophylactic treatment of the disease or disorder; or delaying the onset or progression of the disease or disorder
- a subject is“in need of” a treatment if such subject would benefit biologically, medically, or in quality of life from such treatment.
- any asymmetric atom (e.g., carbon or the like) of the compound(s) of the present invention can be present in racemic or enantiomerically enriched, for example the (R)-, (S)- or (R,S)- configuration.
- each asymmetric atom has at least 50 % enantiomeric excess, at least 60 % enantiomeric excess, at least 70 % enantiomeric excess, at least 80 % enantiomeric excess, at least 90 % enantiomeric excess, at least 95 % enantiomeric excess, or at least 99 % enantiomeric excess in the (R)- or (S)- configuration.
- a compound of the present invention can be in the form of one of the possible stereoisomers, rotamers, atropisomers, tautomers or mixtures thereof, for example, as substantially pure geometric (cis or trans) stereoisomers, diastereomers, optical isomers (antipodes), racemates, or mixtures thereof.
- Any resulting mixtures of stereoisomers can be separated on the basis of the physicochemical differences of the constituents, into the pure or substantially pure geometric or optical isomers, diastereomers, racemates, for example, by chromatography and/or fractional crystallization.
- Any resulting racemates of final products or intermediates can be resolved into the optical antipodes by known methods, e.g., by separation of the diastereomeric salts thereof, obtained with an optically active acid or base, and liberating the optically active acidic or basic compound.
- a basic compound may thus be employed to resolve the compounds of the present invention into their optical antipodes, e.g., by fractional crystallization of a salt formed with an optically active acid, e.g., tartaric acid, dibenzoyl tartaric acid, diacetyl tartaric acid, di-O,O'-p-toluoyl tartaric acid, mandelic acid, malic acid or camphor-10-sulfonic acid. Racemic products can also be resolved by chiral chromatography, e.g., high performance liquid chromatography (HPLC) using a chiral adsorbent.
- HPLC high performance liquid chromatography
- the compounds of the present invention may be prepared in accordance to the definition of compound of formula (I), by the routes described in the following Schemes or the Examples. All methods described herein can be performed in any suitable order unless otherwise indicated herein or otherwise clearly contradicted by context.
- the use of any and all examples, or exemplary language (e.g. "such as”) provided herein is intended merely to better illustrate the invention and does not pose a limitation on the scope of the invention otherwise claimed.
- Step (a) involves condensation reaction of substituted aniline and N-Boc-4-oxopiperidine in the presence of pyrrolidine in a suitable solvent such as DMSO at a suitable temperature such as 140 o C.
- Step (b) involves removal of N-protecting groups such as Boc and PMB group using reagents such as TFA in a suitable solvent such as DCM at room temperature.
- Step (c) involves formation of urea with primary amines using reagents such as CDI or triphosgene in a suitable solvent such as DMF and MeCN and base such as Hunig base at room temperature.
- the substituents of R 4 groups can be further transformed into new substituents by methods such as reductive amination, alkylation, sulfonylation, phosphorylation, O-deprotection, ester hydrolysis, and amidation.
- Step (a) involves reaction of spiro-piperidine compound and substituted isocyanate in a suitable solvent such as THF at a suitable temperature such as room temperature.
- Step (a) involves reaction for reducing ketones to the corresponding alcohols using a suitable reagent such as sodium borohydride and in a suitable solvent such as ethanol at a suitable temperature such as room temperature.
- a suitable reagent such as sodium borohydride
- a suitable solvent such as ethanol
- enantiomers of the alcohols were separated by chromatography using chiral column.
- Compounds of this embodiment are useful in the preparation of compounds of the invention, e.g., compounds of formulae (I) to (IV), or a pharmaceutically acceptable salt thereof.
- the invention further includes any variant of the present processes, in which an intermediate product obtainable at any stage thereof is used as starting material and the remaining steps are carried out, or in which the starting materials are formed in situ under the reaction conditions, or in which the reaction components are used in the form of their salts or optically pure material.
- Compounds of the invention and intermediates can also be converted into each other according to methods generally known to those skilled in the art.
- the present invention provides a pharmaceutical composition comprising a compound of the present invention, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.
- the composition comprises at least two pharmaceutically acceptable carriers, such as those described herein.
- the pharmaceutical composition can be formulated for particular routes of administration such as oral administration, parenteral administration (e.g. by injection, infusion, transdermal or topical administration), and rectal administration. Topical administration may also pertain to inhalation or intranasal application.
- the pharmaceutical compositions of the present invention can be made up in a solid form (including, without limitation, capsules, tablets, pills, granules, powders or suppositories), or in a liquid form (including, without limitation, solutions, suspensions or emulsions). Tablets may be either film coated or enteric coated according to methods known in the art.
- the pharmaceutical compositions are tablets or gelatin capsules comprising the active ingredient together with one or more of:
- diluents e.g., lactose, dextrose, sucrose, mannitol, sorbitol, cellulose and/or glycine
- lubricants e.g., silica, talcum, stearic acid, its magnesium or calcium salt and/or polyethyleneglycol
- binders e.g., magnesium aluminum silicate, starch paste, gelatin, tragacanth, methylcellulose, sodium carboxymethylcellulose and/or polyvinylpyrrolidone; if desired
- disintegrants e.g., starches, agar, alginic acid or its sodium salt, or effervescent mixtures
- the compounds of any one of formulae (I) to (III) in free form or in pharmaceutically acceptable salt form exhibit valuable pharmacological properties, e.g. IL-17 modulating properties, e.g. as indicated in in vitro tests as provided in the next sections, and are therefore indicated for therapy or for use as research chemicals, e.g. as tool compounds.
- pharmacological properties e.g. IL-17 modulating properties, e.g. as indicated in in vitro tests as provided in the next sections, and are therefore indicated for therapy or for use as research chemicals, e.g. as tool compounds.
- NSCLC non-small cell lung cancer
- esophageal cancer uterine cancer
- breast cancer bladder cancer
- cervical cancer colorectal cancer
- kidney cancer melanoma
- stomach castration-resistant prostate cancer
- T-ALL T-cell acute lymphoblastic leukemia
- AML acute myeloid leukemia
- MDS myelodysplastic syndrome
- the therapy is selected from a disease, which may be treated by an AKR1C3 dependent KARS inhibitor.
- the disease is selected from the afore-mentioned list, suitably from cancer, in particular wherein the cancer is selected from non-small cell lung cancer (NSCLC), liver cancer, head and neck cancer, esophageal cancer, uterine cancer, breast cancer, bladder cancer, cervical cancer, colorectal cancer, kidney cancer, melanoma, stomach, castration-resistant prostate cancer (CRPC), T-cell acute lymphoblastic leukemia (T-ALL), acute myeloid leukemia (AML), and myelodysplastic syndrome (MDS).
- NSCLC non-small cell lung cancer
- T-ALL T-cell acute lymphoblastic leukemia
- AML acute myeloid leukemia
- MDS myelodysplastic syndrome
- the present invention provides a compound of any one of formulae (I) to (III), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 9e), or a pharmaceutically acceptable salt thereof, for use in therapy.
- the therapy is selected from a disease which may be treated by an AKR1C3 dependent KARS inhibitor.
- the disease is selected from the afore-mentioned list, suitably from cancer, in particular
- the invention provides a method of treating, or preventing a disease which is treated by an AKR1C3 dependent KARS inhibitor comprising administration of a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof.
- the disease is selected from the afore-mentioned list, suitably from cancer, in particular.
- the present invention provides the use of a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof, for the manufacture of a medicament.
- the medicament is for treatment, or prevention of a disease, which may be treated by an AKR1C3 dependent KARS inhibitor.
- the disease is selected from the afore-mentioned list, suitably from cancer in particular
- the pharmaceutical composition or combination of the present invention can be in unit dosage of about 1 - 1000 mg of active ingredient(s) for a subject of about 50 - 70 kg, or about 1 - 500 mg or about 1 - 250 mg or about 1 - 150 mg or about 0.5 - 100 mg, or about 1 - 50 mg of active ingredients.
- the therapeutically effective dosage of a compound, the pharmaceutical composition, or the combinations thereof is dependent on the species of the subject, the body weight, age and individual condition, the disorder or disease or the severity thereof being treated. A physician, clinician or veterinarian of ordinary skill can readily determine the effective amount of each of the active ingredients necessary to prevent, treat or inhibit the progress of the disorder or disease.
- the above-cited dosage properties are demonstrable using in vitro and in vivo tests using advantageously mammals, e.g., mice, rats, dogs, monkeys or isolated organs, tissues and preparations thereof.
- the compounds of the present invention can be applied in vitro in the form of solutions, e.g., aqueous solutions, and in vivo either enterally, parenterally, advantageously intravenously, e.g., as a suspension or in aqueous solution.
- the dosage in vitro may range between about 10 -3 molar and 10 -9 molar concentrations.
- a therapeutically effective amount in vivo may range depending on the route of administration, between about 0.1 - 500 mg/kg, or between about 1 - 100 mg/kg.
- “Combination” refers to either a fixed combination in one dosage unit form, or a combined administration where a compound of the present invention and a combination partner (e.g. another drug as explained below, also referred to as“therapeutic agent” or“co-agent”) may be administered independently at the same time or separately within time intervals, especially where these time intervals allow that the combination partners show a cooperative, e.g. synergistic effect.
- the single components may be packaged in a kit or separately.
- One or both of the components e.g. powders or liquids
- co- administration or“combined administration” or the like as utilized herein are meant to encompass administration of the selected combination partner to a single subject in need thereof (e.g. a patient), and are intended to include treatment regimens in which the agents are not necessarily administered by the same route of administration or at the same time.
- pharmaceutical combination as used herein means a product that results from the mixing or combining of more than one therapeutic agent and includes both fixed and non-fixed combinations of the therapeutic agents.
- fixed combination means that the therapeutic agents, e.g. a compound of the present invention and a combination partner, are both administered to a patient simultaneously in the form of a single entity or dosage.
- non-fixed combination means that the therapeutic agents, e.g.
- a compound of the present invention and a combination partner are both administered to a patient as separate entities either simultaneously, concurrently or sequentially with no specific time limits, wherein such administration provides therapeutically effective levels of the two compounds in the body of the patient.
- cocktail therapy e.g. the administration of three or more therapeutic agents.
- pharmaceutical combination refers to either a fixed combination in one dosage unit form, or non-fixed combination or a kit of parts for the combined administration where two or more therapeutic agents may be administered independently at the same time or separately within time intervals, especially where these time intervals allow that the combination partners show a cooperative, e.g. synergistic effect.
- composition therapy refers to the administration of two or more therapeutic agents to treat a therapeutic condition or disorder described in the present disclosure.
- administration encompasses co-administration of these therapeutic agents in a substantially simultaneous manner, such as in a single capsule having a fixed ratio of active ingredients.
- administration encompasses co-administration in multiple, or in separate containers (e.g. tablets, capsules, powders, and liquids) for each active ingredient. Powders and/or liquids may be reconstituted or diluted to a desired dose prior to administration.
- administration also encompasses use of each type of therapeutic agent in a sequential manner, either at approximately the same time or at different times. In either case, the treatment regimen will provide beneficial effects of the drug combination in treating the conditions or disorders described herein.
- the compound of the present invention may be administered either simultaneously with, or before, or after, one or more other therapeutic agent.
- the compound of the present invention may be administered separately, by the same or different route of administration, or together in the same pharmaceutical composition as the other agents.
- a therapeutic agent is, for example, a chemical compound, peptide, antibody, antibody fragment or nucleic acid, which is therapeutically active or enhances the therapeutic activity when administered to a patient in combination with a compound of the invention.
- the invention provides a product comprising a compound of formula (I), (II), (III) or (IV), or a compound according to any one of the preceding embodiments (i.e.
- the therapy is the treatment, or prevention of a disease or condition mediated by an AKR1C3 dependent KARS inhibitor.
- Products provided as a combined preparation include a composition comprising the compound of any one of formulae (I) to (IV), or a pharmaceutically acceptable salt thereof, and the other therapeutic agent(s) together in the same pharmaceutical composition, or the compound of any one of formulae (I) to (IV), or a pharmaceutically acceptable salt thereof, and the other therapeutic agent(s) in separate form, e.g. in the form of a kit.
- the invention provides a pharmaceutical combination comprising a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof, and another therapeutic agent(s).
- the pharmaceutical combination may comprise a pharmaceutically acceptable carrier, as described above.
- the invention provides a kit comprising two or more separate pharmaceutical compositions, at least one of which contains a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof.
- the kit comprises means for separately retaining said compositions, such as a container, divided bottle, or divided foil packet.
- a container, divided bottle, or divided foil packet An example of such a kit is a blister pack, as typically used for the packaging of tablets, capsules and the like.
- the kit of the invention may be used for administering different dosage forms, for example, oral and parenteral, for administering the separate compositions at different dosage intervals, or for titrating the separate compositions against one another.
- the kit of the invention typically comprises directions for administration.
- the compound of the invention and the other therapeutic agent may be manufactured and/or formulated by the same or different manufacturers.
- the compound of the invention and the other therapeutic may be brought together into a combination therapy: (i) prior to release of the combination product to physicians (e.g. in the case of a kit comprising the compound of the invention and the other therapeutic agent); (ii) by the physician themselves (or under the guidance of the physician) shortly before administration; (iii) in the patient themselves, e.g. during sequential administration of the compound of the invention and the other therapeutic agent.
- the invention provides the use of a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e.
- the invention also provides the use of another therapeutic agent for treating, or preventing a disease or condition mediated by an AKR1C3 dependent KARS inhibitor wherein the medicament is administered with a compound of any one of formulae (I) to (IV), or a pharmaceutically acceptable salt thereof.
- the invention also provides a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e.
- the invention also provides another therapeutic agent for use in a method of treating, or preventing a disease or condition mediated by AKR1C3 dependent KARS inhibitor, wherein the other therapeutic agent is prepared for administration with a compound of formula (I), (II), (III), or (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof.
- the invention also provides a compound of formula (I), (II), (III), or (IV), or a compound according to any one of the preceding embodiments (i.e.
- the invention also provides another therapeutic agent for use in a method of treating, or preventing a disease or condition mediated by AKR1C3 dependent KARS inhibitor, wherein the other therapeutic agent is administered with a compound of formula (I), (II), (III), or (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof.
- the invention also provides the use of a compound of any one of formulae (I) to (IV), or a compound according to any one of the preceding embodiments (i.e.
- any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof for treating, or preventing a disease or condition mediated by AKR1C3, wherein the patient has previously (e.g. within 24 hours) been treated with another therapeutic agent.
- the invention also provides the use of another therapeutic agent for treating a disease or condition mediated by an AKR1C3 dependent KARS inhibitor, wherein the patient has previously (e.g. within 24 hours) been treated with a compound of formula (I), (II), (III) or (IV), or a compound according to any one of the preceding embodiments (i.e. according to any one of embodiments 1 to 5, or a pharmaceutically acceptable salt thereof.
- room temperature or“ambient temperature” means a temperature of from 15°C to 30°C, such as of from 20°C to 30°C, such as of from 20°C to 25°C.
- TFA method Sunfire 5mm column, 0.1% TFA in acetonitrile and Water.
- Step 1 Preparation of 1-(5-fluoro-2-((4-methoxybenzyl)amino)phenyl)ethan-1-one
- step 3 To a solution of the product in step 3 (57.3 g, 343 mmol) and tert-butyl 4-oxopiperidine-1-carboxylate (137 g, 685 mmol) in DMSO (300 mL) was added pyrrolidine (85 mL, 10 mmol). The reaction was heated at 140 °C for 24 h with a cold condenser set at 5 °C. The mixture was poured into 2L of water and extracted with EtOAc (3x750mL). The organics were combined, washed with brine, dried with Na 2 SO 4 , filtered, and volatiles were removed in vacuo.
- Step 1 The product in Step 1 was dissolved in DCM (10 mL), and trifluoroacetic acid (5.63 mL, 73.5 mmol) was added. The mixture was stirred at RT for 2 h. Volatiles were removed in vacuo. The residue was dissolved in 4 mL of DCM and was azeotroped with 10 mL of toluene to remove excess TFA. The resulting oil was dissolved in dioxane and 4 mL of 4M HCl in dioxane was added dropwise with stirring. The product precipitated from solution to form an off-white solid. The solid was then filtered and washed with dioxane (3x20mL).
- the crude oil was loaded onto a hand-packed silica gel dry-loading column and was purified by silica gel chromatography (EtOAc/heptane 0% to 50%) to afford the title compound (301 mg, 17% yield) in >95% purity as a yellow oil.
- Step 1 Preparation of tert-butyl 3-carbamoyl-4-fluorobenzylcarbamate
- the title compound was prepared by a method similar to Intermediate 4, step 1, using 5-cyano-2- fluorobenzamide instead of 4-amino-3-fluorobenzonitrile.
- the crude residue was purified by silica gel chromatography (EtOAc/Heptane) to give the title compound (1.1 g, 95% yield).
- Step 2 Preparation of 5-(aminomethyl)-2-fluorobenzamide
- Step 1 Preparation of 1-(5-fluoro-2-((2-methoxyethyl)amino)phenyl)ethanone
- 1-(2-amino-5-fluorophenyl)ethan-1-one 200 mg, 1.3 mmol
- DMF 3 mL
- 1-bromo-2-methoxyethane 0.17 mL, 6.53 mmol
- KI 1084 mg, 6.53 mmol
- DIPEA (1.140 mL, 6.53 mmol
- Step 2 Preparation of 6'-fluoro-1'-(2-methoxyethyl)-1'H-spiro[piperidine-4,2'-quinolin]-4'(3'H)-one
- EtOH a solution of the product in step 12) (110 mg, 0.521 mmol) in EtOH (5 mL) was added tert-butyl 4-oxopiperidine-1-carboxylate (135 mg, 0.677 mmol) and pyrrolidine (0.086 mL, 1.042 mmol).
- the reaction was heated in the microwave for 6 h at 110 °C.
- the reaction mixture was then diluted with EtOAc, washed with aqueous saturated sodium bicarbonate, dried over Na 2 SO 4 and concentrated under reduced pressure.
- Step 1 Preparation of 4-fluoro-3-(oxazol-5-yl)benzonitrile
- MeOH MeOH
- K 2 CO 3 0.60 g, 4.359 mmol
- 2-fluoro-5-bromobenzaldehye 0.5 g, 3.335 mmol
- Step 3 Prepparation of tert-butyl (2,4-difluoro-5-((2-methoxyethyl)amino)benzyl)carbamate
- a microwave equipped with a stir bar was added the product in step 2 (330 mg, 2 mmol), DMF (2 mL), DIPEA (1.87 mL, 11 mmol), 1-bromo-2-methoxyethane (1.01 mL, 11 mmol) and potassium iodide (3.37 g, 20.33 mmol).
- the microwave vial was capped, and irradiated at 110 °C for 10 h.
- the title compound was prepared by a method similar to Interemediate 4, step 1, using 3-amino-4- fluorobenzonitrile instead of 4-amino-3-fluorobenzonitrile.
- Step 1 Preparation of tert-butyl 3-amino-2,4-difluorobenzylcarbamate
- Step 1 Synthesis of benzyl (3-amino-4-fluorobenzyl)carbamate
- Step 3 Synthesis of 5-(aminomethyl)-N-(2-((tert-butyldimethylsilyl)oxy)ethyl)-2-fluoroaniline
- a mixture of the product in Step 2 (2.33 g, 5.39 mmol) and 10% Pd/C (0.12 g) in EtOH (30 mL) was hydrogenated under balloon pressure and at RT for 15 min, and filtered through Celite, and the filtrate was concentrated to give the crude product. Purification by silica gel chromatography (DCM / MeOH) gave the title compound as a light yellow oil (1.46 g).
- Step 1 Preparation of tert-butyl (4-amino-2,5-difluorobenzyl)carbamate
- Step 1 Preparation of tert-butyl 2-(ethylamino)-4-fluorobenzylcarbamate
- Step 1 Preparation of tert-butyl (4-amino-2,3-difluorobenzyl)carbamate
- Step 1 Preparation of methyl 5-(((tert-butoxycarbonyl)amino)methyl)-2-fluorobenzoate
- step 2 To a stirred solution of the product in step 2 (0.5 g, 1.915 mmol) in DMF (5 mL) was added sodium azide (0.136 g, 2.106 mmol). The mixture was stirred at RT for 2h. The mixture was concentrated in vacuo. The mixture was diluted with water and extracted with ether. The organic extracts were combined, washed with water and saturated NaCl, dried over Na 2 SO 4 , filtered, and concentrated in vacuo. The crude product was carried forward to next step without purification. (0.3 g, 71% yield). LCMS: m/z 196.1 (M+H-N 2 ).
- Step 4 Preparation of 2-(5-(azidomethyl)-2-fluorophenyl)acetic acid
- MeOH MeOH
- water 2 mL
- LiOH.H 2 O LiOH.H 2 O (0.18 g, 4.48 mmol
- the mixture was stirred at RT for 2h.
- the mixture was concentrated in vacuo.
- the crude mixture was acidified with 3N HCl aqueous solution.
- the product precipitated from solution to form an off-white solid.
- the solid was then filtered under vacuo.
- the crude product was carried forward to next step without purification. (0.41 g, 89% yield).
- Step 5 Preparation of 2-(5-(azidomethyl)-2-fluorophenyl)acetamide
- step 4 To a stirred solution of the product in step 4 (0.41 g, 1.96 mmol) in DMF (10 mL), was added pyridine (0.31 g, 3.92 mmol) followed by di-tert-butyl dicarbonate (1.32 g, 6.07 mmol), and NH 4 HCO 3 (0.48 g, 6.07 mmol). The mixture was stirred at RT for 16 h. The mixture was diluted with saturated NH 4 Cl and extracted with EtOAc. The organic extracts were combined, washed with water and saturated NaCl, dried over Na 2 SO 4 , filtered, and concentrated in vacuo.
- Step 1 Preparation of tert-butyl (4-amino-2,6-difluorobenzyl)carbamate
- Step1 Preparation of 2-(2,4-difluoro-5-methylphenyl)-4,4,5,5-tetramethyl-1,3,2-dioxaborolane
- KOAc 1.0 g, 9.66 mmol
- PdCl 2 dppf
- Step 1 Preparation of 1-(3,5-difluoro-2-((4-methoxybenzyl)amino)phenyl)ethan-1-one
- Step 2 Preparation of tert-butyl (3-sulfamoylbenzyl)carbamate
- the title compound was prepared by a method similar to Intermediate 4, step 1, using 3- cyanobenzenesulfonamide instead of 4-amino-3-fluorobenzonitrile.
- LCMS m/z 248.9 (M-H).
- Step 3 Preparation of 3-(aminomethyl)benzenesulfonamide
- Step 1 Preparation of tert-butyl 2,4-difluoro-3-((2-methoxyethyl)amino)benzylcarbamate
- Step 4 Preparation of 3-cyano-6-fluoro-2-methylbenzoic acid
- the title compound was prepared by a method similar to Intermediate 22, step 4, using the product in step 3 (0.35 g, 1.911 mmol) and sodium hydroxide(0.144 g, 3.623 mmol) instead of the product obtained for Intermediate 22, step 3 and lithium hydroxide, respectively.
- the mixture was concentrated concentrated in vacuo and extracted in EtOAc. Organic layer was discarded and aqueous layer was acidified with 3N HCl solution and extracted in DCM.
- Step 1 Preparation of tert-butyl (4-amino-2,6-difluorobenzyl)carbamate
- Step 2 Preparation of (E)-1'-(but-2-en-1-yl)-6'-fluoro-1'H-spiro[piperidine-4,2'-quinolin]-4'(3'H)-one
- MeOH MeOH
- tert-butyl 4-oxopiperidine-1-carboxylate 558 mg, 2.80 mmol
- pyrrolidine 0.231 mL, 2.80 mmol
- Step 1 Preparation of tert-butyl (4-amino-3-chlorobenzyl)carbamate
- Step 1 Preparation of tert-butyl (4-amino-2-trifluoromethylbenzyl)carbamate
- Step 1 Preparation of tert-butyl (4-amino-2-chlorobenzyl)carbamate
- Step 1 Preparation of tert-butyl (4-amino-3-trifluoromethylbenzyl)carbamate
- Step 1 Preparation of tert-butyl (4-amino-3-trifluoromethylbenzyl)carbamate
- Step 1 Preparation of tert-butyl (4-amino-3-trifluoromethylbenzyl)carbamate
- Step 1 Preparation of N-(5-cyano-2-fluorophenyl)methanesulfonamide
- pyridine 862 ⁇ l
- methylsulfonyl chloride 256 ⁇ l, 3.31 mmol
- the reaction was stirred at RT overnight.
- the reaction was concentrated and the residue was partitioned between 1N aqueous HCl and EtOAc.
- the organic layer was washed with brine, dried over MgSO 4 and filtered.
- the filtrate was concentrated to give the title compound as a pale pink solid (708 mg, 90% yield).
- HRMS m/z 215.0292 (M+H).
- Step 2 Preparation of tert-butyl 4-fluoro-3-(methylsulfonamido)benzylcarbamate
- Step 1 Preparation of tert-butyl 4-fluoro-3-((2-methoxyethoxy)methyl)benzylcarbamate
- Step 2 Preparation of 2-(5-(azidomethyl)-2-fluorophenyl)propan-2-ol
- the title compound was obtained by a method similar to Intermediate 25, step 5 using 2-(5- (bromomethyl)-2-fluorophenyl)propan-2-ol.
- the crude product (1.1 g, 59% yield) was directly engaged in the next reaction.
- Step 3 Preparation of 2-(5-(aminomethyl)-2-fluorophenyl)propan-2-ol
- the title compound was prepared by referencing Angew. Chem. Int. Ed.2011, 50, 8325–8328.
- An oven dried flask cooled -40 °C was added 1.3 M THF solution of isopropylmagnesium chloride lithium chloride (3846 ⁇ l, 5.00 mmol), and 3-bromo-4-fluorobenzonitrile (1 g, 5.00 mmol).
- the mixture was stirred for 3 h at -40 °C, and then was then titrated with iodine.
- step 1 To a solution of the product in step 1 (1.2 g, 7.84 mmol) in methanol (50 mL) was added cobalt(II) chloride hexahydrate(CoCl 2 .6H 2 O) (1.87 g, 7.84 mmol) followed by portion-wise addition of NaBH 4 (0.89 g, 23.53 mmol) at 0 °C. The mixture was brought to RT and stirred for additional 12 h. The mixture was quenched by adjusting the pH to 13 with ammonium hydroxide and extracted with EtOAc (3 x 50 mL). The combined organic layer was washed with brine, dried over Na 2 SO 4 , and concentrated in vacuo.
- Step 1 Preparation of tert-butyl (benzo[c][1,2,5]oxadiazol-4-ylmethyl)carbamate
- Step 1 Synthesis of 6'-fluoro-N-(4-fluoro-3-(2-methoxyethoxy)benzyl)-1'-methyl-4'-oxo-3',4'-dihydro- 1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to Example 2, using (2,4- difluorophenyl)methanamine instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the crude residue was purified by preparative HPLC (Basic, Method 5) to give the title compound (120 mg, 22% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using (4- fluorophenyl)methanamine and Intermediate 5 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the product was purified by SFC (column: Phenomenex Kinetex Biphenyl 21.2x150 mm 5 ⁇ m; mobile phase: MeOH) to give the title compound (65 mg, 51% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 1, using Intermediate 3 instead of Intermediate 2.
- the product was purified by silica gel chromatography (MeOH/DCM) followed by reversed-phase HPLC (Basic, Method 4) to give the title compound (12 mg, 11% yield) as a yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using (4-fluoro-3- methoxyphenyl)methanamine instead of Intermediate 1.
- the title compound was prepared by a method similar to Example 2, using (4- fluorophenyl)methanamine instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the crude residue was purified by preparative HPLC (Basic, Method 6) to give the title compound (42 mg, 12% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediates 6 and 26 (free base) instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the crude residue was purified by preparative HPLC (Basic, Method 4) to give the title compound (57 mg, 32% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediates 7 and 2 (HCl salt) instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the product was purified by by preparative HPLC (Basic, Method 5), followed by SFC (column: Princeton DIOL 20x150mm 5 ⁇ m; mobile phase: MeOH) to give the title compound (29 mg, 31% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediates 6 and 5 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the crude residue was purified by preparative HPLC (Basic, Method 4) to give the title compound (55 mg, 26% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using (4- fluorophenyl)methanamine and Intermediate 8 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the product was purified by preparative HPLC (Basic, Method 5) to give the title compound (14 mg, 21% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediate 9 (TFA salt) and 2 (HCl salt) instead of (4-fluorophenyl)methanamine and Intermediate 3, respectively.
- the product was purified on preparative TLC plate using 5 % MeOH in DCM as mobile phase, to give the title compound (49 mg, 44% yield) as a yellow solid.
- the title compound was prepared by a method similar to Example 2, using (2,4- difluorophenyl)methanamine and Intermediate 2 (HCl salt) instead of (4-fluorophenyl)methanamine and Intermediate 3, respectively.
- the product was purified by preparative SFC (column: Princeton DIOL 20x150mm 5 ⁇ m; mobile phase: MeOH), to give the title compound (35 mg, 36% yield) as a yellow solid.
- Step 1 Synthesis of N-(2,4-difluoro-5-((2-methoxyethyl)amino)benzyl)-6'-fluoro-1'-methyl-4'-oxo- 3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- Step 2 Synthesis of N-(2,4-difluoro-5-((2-hydroxyethyl)amino)benzyl)-6'-fluoro-1'-methyl-4'-oxo- 3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to Example 3, Step 2.
- the product was purified by prep HPLC (Basic, Method 4) to afford the title compound (22 mg, 44.8% yield) as a yellow solid.
- Step 1 Synthesis of N-(2,4-difluoro-5-((2-methoxyethyl)amino)benzyl)-1'-ethyl-6'-fluoro-4'-oxo-3',4'- dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to to Example 3, Step 2.
- the product was then purified by preparative SFC (column: Princeton DEAP 20x150 mm 5 ⁇ m; mobile phase: MeOH) to afford the title compound (5 mg, 27.1% yield) as a yellow solid.
- Example 14 To a solution of Example 14 (65 mg, 0.147 mmol) in dry DCM (2 mL) at 0 °C was slowly added tribromoborane 1M in DCM (0.293 mL, 0.293 mmol). The reaction mixture was stirred at 0 °C for 30 min then quenched by saturated NH 4 Cl aqueous solution and extracted with DCM and EtOAc. The combined organic layers were dried over Na 2 SO 4 and concentrated under reduced pressure. The residue was purified by purified by purified by preparative SFC (column: Princeton DEAP 20x150 mm 5 ⁇ m; mobile phase: MeOH) to yield the title compound (35 mg, 53% yield) as a yellow solid.
- preparative SFC columnumn: Princeton DEAP 20x150 mm 5 ⁇ m; mobile phase: MeOH
- the title compound was prepared by a method similar to Example 2, using Intermediate 11 instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the crude residue was purified by HPLC (Basic, Method 5) to give the title compound (40mg, 93% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediate 12 instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the title compound was prepared by a method similar to Example 1, using (5-chlorofuran-2- yl)methanamine (prepared according to J. Med. Chem.2016, 59, 3471) instead of Intermediate 1.
- Intermediate 2 was HCl salt.
- the product was purified by silica gel chromatography (MeOH/DCM) followed by reversed-phase HPLC (Basic, Method 4) to give the title compound (27 mg, 25% yield) as a yellow solid after lyophilization.
- Example 95 To a stirred solution of Example 95 (35 mg, 0.087 mmol) in DCM (437 ⁇ L) and pyridine (437 ⁇ L) was added 2-propanesulfonyl chloride (9.81 ⁇ L, 0.087 mmol). The reaction was allowed to stir at 50 o C. The crude material was purified by HPLC (Basic, Method 3) to afford the title compound as a yellow solid (7.3 mg, 16% yield).
- the title compound was prepared by a method similar to Example 2, using Intermediates 6 and 2 (free base) instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the crude product was purified by preparative HPLC (Basic, Method 4) to give the title compound (110 mg, 39% yield) as a fluffy yellow solid after lyophilization.
- Step 1 Synthesis of 1'-ethyl-6'-fluoro-N-(4-fluoro-3-((2-methoxyethyl)amino)benzyl)-4'-oxo-3',4'- dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to Example 19, using the product in step 1 instead of Example 14.
- the product was purified by preparative HPLC (Basic, Method 4) to give the title compound (3 mg, 31% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using Intermediates 13 and 5 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the product was purified by preparative HPLC (Basic, Method 4) to give the title compound (5 mg, 5% yield) as a fluffy yellow solid after lyophilization.
- the title compound was prepared by a method similar to Example 2, using 5-(aminomethyl)-2- fluoroaniline instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the crude residue was purified by preparative HPLC (Basic, Method 4) to give the title compound (110 mg, 37% yield) as a fluffy yellow solid after lyophilization.
- Example 36 To a solution of Example 36 (300 mg, 0.654 mmol) and triethylamine (0.547 mL, 3.93 mmol) in THF (5 mL) in an ice bath was added phosphorous oxychloride (0.122 mL, 1.309 mmol) dropwise. The reaction mixture was removed from the ice bath after 5 min and was allowed to warm to RT over 30 min. The mixture was quenched slowly with H 2 O and was transferred to a separatory funnel. The aqueous layer was extracted with EtOAc/THF (1:1) (3x100mL). The organic extracts were combined and concentrated in vacuo.
- the title compound was prepared by a method similar to Example 2, using 5-(aminomethyl)-2- fluoroaniline and Intermediate 5 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- the title compound was prepared by a method similar to Example 2, using 5-(aminomethyl)-2- fluorobenzenesulfonamide and Intermediate 2 (free base) instead of (4-fluoro-2- methoxyphenyl)methanamine and Intermediate 3, respectively.
- the crude residue was purified by preparative HPLC (Basic, Method 4) to give the title compound (110 mg, 37% yield) as a fluffy yellow solid after lyophilization.
- Example 27 A mixture of Example 27 (50 mg, 0.121 mmol), Intermediate 14 (crude material) and NaBH(OAc) 3 (52 mg, 0.25 mmol) in DCM (5 mL) was stirred at RT for 16 h, partitioned between DCM and aqueous NH 4 Cl solution. The combined organic extract was dried over MgSO 4 , concentrated, and purified by reverse-phase HPLC (Basic, Method 4) to give the title compound as a yellow solid (9 mg, 14% yield).
- Step 1 Synthesis of 2-fluoro-5-((6'-fluoro-4'-oxo-3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinolin]-1- ylcarboxamido)methyl)benzoic acid
- Example 61 (5.93 g, 13.37 mmol) in THF (10 mL) and Water (10 mL) was added LiOH (0.641 g, 26.7 mmol). The reaction mixture was stirred at RT for 16 h. Volatiles were concentrated in vacuo. The crude residue was triturated with MeOH/DCM, filtered, and dried in a vacuum oven for 16 h to obtain the title compound.
- Step 2 Synthesis of 6'-fluoro-N-(4-fluoro-3-((4-(hydroxymethyl)benzyl)carbamoyl)benzyl)-4'-oxo- 3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to Example 2, using benzyl amine and Intermediate 2 (HCl salt) instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermediate 3, respectively.
- Step 1 Synthesis of N-(3-((2-((tert-butyldimethylsilyl)oxy)ethyl)amino)-4-fluorobenzyl)-6'-fluoro-1'- methyl-4'-oxo-3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- step 1 The product in step 1 was taken up in THF (20 mL). To this was added TBAF (1M THF solution, 6.70 mL, 6.70 mmol). The mixture was stirred at RT for 2 h and partitioned between aqueous NH 4 Cl and EtOAc. The combined organic extract was dried over Na 2 SO 4 and concentrated. The crude product was purified by silica gel chromatography (MeOH/DCM) to give the title compound (1.33 g, 86% yield) as a yellow solid.
- the title compound was prepared by a method similar to Example 1, using Intermediates 6 and 3 instead of Intermediates 1 and 2, respectively.
- DCM/MeOH 100/0 to 90/10
- Compound Example 140 was prepared by hydrolysis of the corresponding methyl ester (43 mg, 0.081 mmol) as described in Example 140, Step 1.
- the curde carboxylic acid product (Example 140) was taken up in DMF (6 mL) and separated into two vials with equal volume. To one of the vials were added HATU (145 mg, 0.381 mmol) and N-Me piperazine (150 ⁇ L, 1.35 mmol). The mixture was stirred at RT for 2 h, partitioned between EtOAc and aqueous NH 4 Cl solution.
- Step 1 Synthesis of (S)-N-(3-(((2,2-dimethyl-1,3-dioxolan-4-yl)methyl)amino)-4-fluorobenzyl)-6'- fluoro-1'-methyl-4'-oxo-3',4'-dihydro-1'H-spiro[piperidine-4,2'-quinoline]-1-carboxamide
- the title compound was prepared by a method similar to Example 32, Step 2.
- the title compound was prepared by a method similar to Example 2, using (2,4- difluorophenyl)methanamine and Intermediate 5 instead of (4-fluoro-2-methoxyphenyl)methanamine and Intermedate 3, respectively.
- the crude residue was purified by preparative HPLC (Basic, Method 4) to give the title compound (6 mg, 4% yield) as a fluffy yellow solid after lyophilization.
- Example 43 To a solution of Example 43 (50 mg, 0.124 mmol) in DMF (1.2 mL) was added 1,1,1-trifluoro-2- iodoethane (34 mg, 0.16 mmol) and cesium carbonate (60.8 mg, 0.186 mmol). The reaction mixture was heated to 70 °C overnight. The reaction mixture was diluted with water, and extracted with EtOAc. The EtOAc layer was concentrated, and purified with HPLC (Basic, Method 5), followed by silica gel column chromatography (Heptane/EtOAc) to give the title compound (8 mg, 6% yield).
- the title compound was prepared by a method similar to Example 2, using Intermediate 18 instead of (4-fluoro-2-methoxyphenyl)methanamine.
- the product was purified by SFC (column: Phenomenex Kinetex Biphenyl 21.2x150 mm 5 ⁇ m; mobile phase: MeOH), followed by preparative HPLC (Basic, Method 6) to give the title compound (10 mg, 17% yield) as a fluffy yellow solid after lyophilization.
- LCMS m/z 443.3 (M+H).
- Example 27 To a stirred solution of Example 27 (17 mg, 0.041 mmol) in DCM (300 ⁇ L) was added pyridine (3.32 ⁇ l, 0.041 mmol) and mesyl chloride (3.24 ⁇ l, 0.041 mmol). The reaction was heated at 50 o C for 2 h. The material was purified by reverse-phase HPLC (Basic, Method 2) to afford the title compound as a yellow solid (8 mg, 39.2% yield). LCMS: m/z 493.1 (M+H).
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WO2022048492A1 (en) | 2020-09-02 | 2022-03-10 | 深圳艾欣达伟医药科技有限公司 | Akr1c3 detection method, and diagnostic kit for detecting akr1c3 and use thereof |
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WO2024023641A1 (en) | 2022-07-26 | 2024-02-01 | Novartis Ag | Methods of tricyclic akr1c3 dependent kars inhibitor dosing field of the invention |
WO2024023659A1 (en) | 2022-07-26 | 2024-02-01 | Novartis Ag | Pharmaceutical compositions of tricyclic akr1c3 dependent kars inhibitor and methods for making same |
WO2024023666A1 (en) | 2022-07-26 | 2024-02-01 | Novartis Ag | Crystalline forms of an akr1c3 dependent kars inhibitor |
US11970497B2 (en) | 2019-08-01 | 2024-04-30 | Novartis Ag | Tricyclic AKR1C3 dependent KARS inhibitors |
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