WO2020205034A1 - Sialidase-resistant saccharide and method of making and using the same - Google Patents

Sialidase-resistant saccharide and method of making and using the same Download PDF

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WO2020205034A1
WO2020205034A1 PCT/US2020/014608 US2020014608W WO2020205034A1 WO 2020205034 A1 WO2020205034 A1 WO 2020205034A1 US 2020014608 W US2020014608 W US 2020014608W WO 2020205034 A1 WO2020205034 A1 WO 2020205034A1
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sialic acid
fluoro
mmol
equiv
hydroxy
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PCT/US2020/014608
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French (fr)
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Chi-Huey Wong
Hong-Jay LO
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Academia Sinica
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Priority to US17/598,064 priority Critical patent/US20220267363A1/en
Priority to KR1020217031324A priority patent/KR20210137485A/en
Priority to JP2021558537A priority patent/JP2022529408A/en
Priority to EP20783332.8A priority patent/EP3947406A4/en
Priority to CN202080022413.3A priority patent/CN115605491A/en
Priority to CA3131096A priority patent/CA3131096A1/en
Publication of WO2020205034A1 publication Critical patent/WO2020205034A1/en
Priority to IL286492A priority patent/IL286492A/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H15/00Compounds containing hydrocarbon or substituted hydrocarbon radicals directly attached to hetero atoms of saccharide radicals
    • C07H15/18Acyclic radicals, substituted by carbocyclic rings
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H1/00Processes for the preparation of sugar derivatives
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H3/00Compounds containing only hydrogen atoms and saccharide radicals having only carbon, hydrogen, and oxygen atoms
    • C07H3/02Monosaccharides
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/2803Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily
    • C07K16/283Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily against Fc-receptors, e.g. CD16, CD32, CD64
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/2887Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against CD20
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/30Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/32Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against translation products of oncogenes
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K2039/505Medicinal preparations containing antigens or antibodies comprising antibodies
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/20Immunoglobulins specific features characterized by taxonomic origin
    • C07K2317/24Immunoglobulins specific features characterized by taxonomic origin containing regions, domains or residues from different species, e.g. chimeric, humanized or veneered
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/40Immunoglobulins specific features characterized by post-translational modification
    • C07K2317/41Glycosylation, sialylation, or fucosylation
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    • C07ORGANIC CHEMISTRY
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    • C07K2317/00Immunoglobulins specific features
    • C07K2317/90Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
    • C07K2317/92Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value

Definitions

  • Sialic acid is a negatively charged monosaccharide often displayed at the outmost end of glycans on glycolipids and glycoproteins, which are involved in many physiological intra- and intercellular processes, including interactions with other biomolecules and receptors on cells, viruses, and bacteria. 1
  • sialylation plays an important role in regulating the function and fate of secreted glycoproteins and membrane-bound receptors. For example, sialylation of the epidermal growth factor receptor (EGFR) was shown to inhibit EGFR dimerization, thus interfering with EGF binding and phosphorylation, which is associated with tumorgenesis.
  • EGFR epidermal growth factor receptor
  • sialylation modulates the half-life of glycoproteins in blood circulation as desialylation of N-glycans exposes the underlining galactose, which is recognized by the hepatic asialoglycoprotein receptors leading to a rapid removal of the glycoprotein from circulation. 3 Hence, increasing the degree of sialylation could improve the half-life and undesirable effects of glycoprotein therapeutics.
  • Sialic acid derivatives with fluorine at the C-3 position are known to inhibit sialyltransferases and sialidases (or neuraminidases) and are more stable. 7
  • glycosylation with fluorinated sugars as donors often present a major challenge due to the strong electronic effect of the fluorine group that inactivates glycosylation reaction.
  • An aspect of the present invention is a method of preparing a saccharide that contains a 3-fluoro-sialic acid.
  • the method includes conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
  • Another aspect of this invention is a method of preparing a homogeneous antibody bonded to a saccharide that contains a 3-fluoro-sialic acid. The method is carried out by glycosylating a monoclonal antibody with the saccharide.
  • R 1 is Ac or H
  • R 2 is Bz or H
  • R 3 is methyl or H
  • R 4 is Bn or H
  • X is OH, a leaving group, or a saccharide.
  • “Ac” represents acetyl
  • “Bz” represents benzoyl
  • “Bn” represents benzyl
  • the saccharide can be a monosaccharide, a disaccharide, or an oligosaccharide.
  • a monoclonal antibody bonded to an a2,6-linked 3-fluoro-sialoside terminated N-glycan is also within the scope of the present invention.
  • the method includes administering to a subject in need thereof an effective amount of a monoclonal antibody bonded to an a2,6-linked 3-fluoro-sialoside terminated N-glycan.
  • FIG.1A shows two graphs depicting enzyme-catalyzed hydrolysis of three sialosides, i.e., 1, 2, and S27, as a function of enzyme concentration; and FIG.1B shows two graphs depicting sialidase inhibition as a function of the concentration of 2, S27, or 2-deoxy-2,3- didehydro-N-acetylneuraminic acid (DANA), a sialidase inhibitor.
  • FIG.2 is a stained electrophoresis gel of four N-glycans: (1) rituxan-G, (2) rituxan- F ax -SCT, (3) rituxan-SCT, and (4) commercial rituxan.
  • FIG.3 shows mass spectra obtained for three N-glycans , i.e., rituxan-F ax -SCT, rituxan-SCT, and rituxan.
  • Disclosed first in detail herein is a method of preparing a saccharide that contains a 3- fluoro-sialic acid.
  • the method includes the steps of conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
  • the saccharide can be a monosaccharide, a disaccharide, or an oligosaccharide. In an exemplary method, the saccharide is a monosaccharide.
  • the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxy-sialic acid
  • the glycosylation reaction is conducted in the presence of silver trifluoromethanesulfonate (AgOTf) and disodium phosphate (Na 2 HPO 4 ).
  • AgOTf silver trifluoromethanesulfonate
  • Na 2 HPO 4 disodium phosphate
  • the glycosylation reaction is conducted in toluene.
  • the fluorinating agent is perfluoro-1- butanesulfonyl fluoride (NfF), and the fluorination reaction is conducted in the presence of a catalyst.
  • the catalyst is 1,8-diazabicyclo[5,4,0]-undec-7-ene (DBU).
  • the fluorination reaction is conducted in toluene.
  • this reaction can be conducted further in the presence of tris(dimethylamino)sulfonium difluorotrimethylsilicate (TASF).
  • TASF tris(dimethylamino)sulfonium difluorotrimethylsilicate
  • the 3-hydroxy-sialic acid is of formula (I):
  • the saccharide is a compound of formula (II):
  • the a2,6-linked 3-hydroxy-sialoside is a compound of formula (III):
  • the saccharide containing a 3-fluoro-sialic acid is a compound of formula (IV):
  • the method further includes conducting another glycosylation reaction by reacting the saccharide containing a 3-fluoro-sialic acid with a second saccharide.
  • Also within the scope of this invention is a method of preparing a homogeneous antibody bonded to a saccharide containing a 3-fluoro-sialic acid. Again, this method includes glycosylating a monoclonal antibody with a saccharide containing a 3-fluoro-sialic acid.
  • the saccharide containing a 3-fluoro-sialic acid is obtained by the method, and embodiments thereof, described above, which includes the steps of conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
  • the saccharide containing a 3-fluoro-sialic acid is an a2,6- linked 3-fluoro-sialoside terminated N-glycan, which can be of formula (V):
  • R 1 , R 2 , R 3 , R 4 , and X are defined in the SUMMARY section above.
  • the compound is of formula (IV):
  • the compounds of formula (VI) each includes X being an N-glycan.
  • An exemplary compound of this embodiment is of formula (V):
  • the present invention also covers a monoclonal antibody bonded to a saccharide containing a 3-fluoro-sialic acid, the saccharide containing a 3-fluoro-sialic acid being an a2,6-linked 3-fluoro-sialoside terminated N-glycan.
  • the a2,6-linked 3-fluoro- sialoside terminated N-glycan is of formula (V) shown above.
  • the cancer can be leukemia or lymphoma
  • the autoimmune disease can be rheumatoid arthritis, autoimmune hemolytic anemia, pure red cell aplasia, thrombotic thrombocytopenic purpura, idiopathic
  • thrombocytopenic purpura leukemia lymphoma, Evans syndrome, vasculitis, bullous skin disorders, type 1 diabetes mellitus, Sjogren’s syndrome, anti-NMDA receptor encephalitis, Devic’s disease, Graves’ ophthalmopathy, autoimmune pancreatitis, opsoclonus myoclonus syndrome, or a IgG4-related disease.
  • treating refers to administering a pharmaceutical composition described above to a subject, who has an above-described disease, i.e., cancer, a symptom of such a disease, or a predisposition toward such a disease, with the purpose of conferring a therapeutic or prophylactic effect.
  • an effective amount refers to the amount of an active drug that is required to confer such effect. Effective doses will vary, as recognized by those skilled in the art, depending on the types of disease treated, route of administration, excipient usage, and the possibility of co-usage with other therapeutic treatment.
  • 3-fluoro-substitued sialic acid derivatives compared to non-fluorinated sialic acid derivatives, are known to be more stable towards sialidases. 7
  • DFSA 2,3-difluorosialic acid
  • hexasaccharide 14 which is a precursor of 17 (Scheme 6).
  • homogeneous 3F ax -Neu5Ac-glycoform to FcgRIIIa was measured by surface plasma resonance analysis 6 together with the parent nonfluorinated glycoform (G2S2) and a commercial sample of rituximab (major glycoforms: G1F1, G0F1, G2F1).
  • G2S2 nonfluorinated glycoform
  • rituximab major glycoforms: G1F1, G0F1, G2F1
  • the homogeneous glycoforms of IgG bearing biantennary N-glycans with a2,6-sialaylation and without core fucose demonstrated 39.9-fold (Neu5Ac-G2S2) and 37.4-fold (3F ax -Neu5Ac-G2S2) improvement in binding avidity (see Table 4).
  • glycoproteins glycoproteins
  • High-resolution mass spectra were recorded on an Agilent LC/MSD TOF mass spectrometer by electrospray ionization time-of-flight (ESI-TOF) reflectron experiments.
  • HPLC measurements were performed on a Hitachi HPLC D-7000 system.
  • RRV measurements were recorded using a normal-phase ZORBAX RX-SIL, 5 ⁇ m, 4.6 x 250mm (Colloidal Silica, Agilent Technologies) using the solvent system EtOAc/hexane with 1 mL/min flow rate, and visualized at 254 nm.
  • reaction mixture was cooled to -50 °C and dry Na2HPO4 (1.07 g, 7.54 mmol, 4.2 equiv.) was added, followed by AgOTf (692 mg, 2.69 mmol, 1.5 equiv., in toluene 18 mL) with stirring.
  • AgOTf 692 mg, 2.69 mmol, 1.5 equiv., in toluene 18 mL
  • the reaction mixture was diluted with EtOAc (80 mL), washed with 20% aq. Na2S2O3 (10 mL), satd. aq. NaHCO3 (5 mL) and brine (5 mL), then the organic layer was dried over MgSO 4 , filtered, and concentrated.
  • reaction mixture was treated with additional amounts of DBU (0.28 mL, 1.86 mmol, 4 equiv.), perfluoro-1-butanesulfonyl fluoride (0.33 mL, 1.86 mmol, 4 equiv.) and TASF (256 mg, 0.93 mmol, 2 equiv.), then stirred at 40 o C for another 24 h.
  • DBU dimethyl sulfoxide
  • TASF 256 mg, 0.93 mmol, 2 equiv.
  • the disaccharide 4 was obtained as a light yellow powder (300 mg, 60%) along with perfluoro-1-butanesulfonyl compound 7 as a light yellow powder (50 mg, 8%).
  • reaction mixture was directly loaded onto the silica gel column and eluted with acetone/toluene (7:3) as eluent; disaccharide 4 was isolated as a light yellow powder (282 mg, 49%) along with perfluoro-1-butanesulfonyl compound 7 as a light yellow powder (267 mg, 77% brsm).
  • reaction mixture was stirred at 0 o C until TLC indicated the disappearance of starting material (3 hrs).
  • reaction mixture was quenched with Et 3 N (0.25 mL), diluted with EtOAc (25 mL), and filtered through a pad of Celite.
  • the filtrate was washed twice with satd. aq. NaHCO3 (10 mL) and brine (6 mL), and the organic phase was dried over MgSO 4 , filtered, and concentrated.
  • the obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent to give compound 14 as a white powder (299 mg, 85%).
  • the reaction mixture was treated sequentially with acceptor 13 (34.2 mg, 0.037 mmol, 1 equiv.), NIS (16.8 mg, 0.075 mmol, 2 equiv.) and TfOH (0.5 M in Et2O, 22.3 ⁇ L, 0.011 mmol, 0.3 equiv.) in anhydrous CH 2 Cl 2 (1.25 mL) with stirring for 10 min under argon.
  • acceptor 13 34.2 mg, 0.037 mmol, 1 equiv.
  • NIS 16.8 mg, 0.075 mmol, 2 equiv.
  • TfOH 0.5 M in Et2O, 22.3 ⁇ L, 0.011 mmol, 0.3 equiv.
  • reaction mixture was quenched with Et3N (0.10 mL), diluted with CH2Cl2 (10 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO 3 (4 mL) and brine (3 mL). The organic phase was dried over MgSO4, filtered, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/toluene (2:3) as eluent to give compound 16 as a white powder (18.0 mg, 33%) along with the recovered acceptor (12.6 mg, 55% brsm).
  • the product was deacetylated by stirring with NaOMe in MeOH (3 mL, 0.5 M) for 16 h.
  • the reaction mixture was neutralized with IR-120, filtered, and concentrated in vacuo.
  • the residue was purified by LiChroprep ® RP-18 reverse-phase column chromatography using H2O/MeOH (1:4) as eluent.
  • the reaction mixture was filtered through a pad of Celite and concentrated in vacuo.
  • reaction mixture was cooled to -40 °C and treated with NIS (423 mg, 1.88 mmol, 2 equiv.) and TfOH (0.5 M in Et 2 O, 0.47 mL, 0.23 mmol, 0.25 equiv.). After stirring at that temperature for 1.5 h, the TLC analysis indicated disappearance of starting materials and the reaction mixture was quenched with Et 3 N (0.2 mL), and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (20 mL), washed with 20% aq. Na 2 S 2 O 3 (5 mL), satd. aq. NaHCO 3 (10 mL) and brine (5 mL).
  • reaction mixture was cooled to 0 °C and NaCNBH3 (313 mg, 4.97 mmol, 10 equiv.) was added, followed by a slow addition of HCl•Et 2 O (2 M in Et 2 O, 2.24 mL, 4.48 mmol, 9 equiv.), and the mixture was continued to stir until TLC indicated the disappearance of starting materials (16 hrs).
  • the reaction mixture was quenched with satd. aq. NaHCO 3 (0.5 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (20 mL) then washed with satd. aq. NaHCO3 (8 mL) and brine (5 mL).
  • reaction mixture was cooled to 0 °C and NaCNBH3 (0.98 g, 15.6 mmol, 10 equiv.) was added, followed by a slow addition of HCl•Et 2 O (2 M in Et 2 O, 7.04 mL, 14.1 mmol, 9 equiv.), and the mixture was stirred until TLC indicated the disappearance of starting materials (16 h).
  • the reaction mixture was quenched with satd. aq. NaHCO3 (0.5 mL) and filtered through a pad of Celite. The filtrate was diluted with CH 2 Cl 2 (50 mL) then washed with satd. aq.
  • the separated organic layer was dried over MgSO 4 , concentrated in vacuo and the obtained residue was used as is for further reactions.
  • the above-obtained residue was added Bu4NOAc (594 mg, 1.97 mmol, 2 equiv.) and dissolved in toluene (18 mL).
  • the solvent was removed in vacuo and the residue was co-evaporated with toluene twice to remove traces of water.
  • the residue was redissolved in anhydrous toluene (12 mL) and the mixture was sonicated for 8 h.
  • the reaction mixture was diluted with EtOAc (20 mL), washed with water (20 mL) and brine (10 mL).
  • the separated organic layer was dried over MgSO 4 and concentrated.
  • Neu5Ac-a2,6-Gal-pNP was synthesized by mixing pNP-b-Gal (1.0 mmol), sialic acid (1.2 mmol), cytidine triphosphate (1.2 mmol), CMP-sialic acid synthetases (CSS, 12 U), pyrophosphatase (PPA, 1U) and a-2,6-sialyltransferase (SiaT, 15U) in 15 mL Tris buffer (pH 7.0) with 5 mM MgCl 2 and 5 mM MnCl 2 .
  • the assays were carried out at 37 o C in duplicates in 96-well plates in a final volume of 50 ⁇ L containing a substrate (0-20 mM), and b-galactosidase (100 mU).
  • the assay conditions for the two sialidases were as follows: C. perfringens (1 mU), sodium acetate buffer (50 mM) pH 5.0 and CaCl 2 (10 mM); V. cholerae (2 mU), sodium acetate buffer (50 mM) pH 5.5, CaCl 2 (10 mM) and NaCl (150 mM). The reactions were carried out for 40 min to 2 hrs for C. perfringens and overnight for V. cholerae.
  • the assays were stopped by adding 65 ⁇ L of CAPS buffer (N-cyclohexyl-3-aminopropane sulfonic acid, 0.5 M, pH 10.5).
  • CAPS buffer N-cyclohexyl-3-aminopropane sulfonic acid, 0.5 M, pH 10.5
  • the amount of the para-nitrophenolate formed was determined by measuring the A405nm of the reaction mixtures using a microplate reader.
  • Three compounds (Neu5Ac-a2,6-GalbpNP, 3F ax -Neu5Ac-a2,6-GalbpNP and 3OH eq -Neu5Ac-a2,6-GalbpNP) were tested as substrates for the enzymes.
  • All three compounds have the background absorbance of A 405nm at 20 mM after incubation for 1 hr at 37 o C in the absence of sialidase.
  • the absorbance of the three compounds Neu5Ac-a2,6-GalbpNP, 3F ax -Neu5Ac-a2,6-GalbpNP and 3OH eq -Neu5Ac-a2,6- GalbpNP were 0.044, 0.129 and 0.072, respectively.
  • the standard curve of pNP was determined by series two-fold dilution of 0.35 mM of pNP, then graphing the A405nm against the concentration of pNP resulted in the standard curve of pNP.
  • the assays were carried out at 37 o C in duplicates in 96-well plates in a final volume of 50 ⁇ L containing the substrate Neu5Ac-a2,6-GalbpNP (0.6 mM), b-galactosidase (100 mU), and sialidase in the absence or presence of an inhibitor at varied concentrations (0-20 mM). Reactions were allowed to proceed for 40 min to 2 hrs for C. perfringens and overnight for V. cholera. The assays were stopped by adding CAPS buffer (65 uL, 0.5 M, pH 10.5). The amount of the para-nitrophenolate formed was determined by measuring the A405nm of the reaction mixture using a microplate reader (FIG.1).
  • EXAMPLE 3 Preparation of Homogeneous mAb Modified with 3F ax -Neu5Ac and Neu5Ac to Study the Effect on Binding to FcgRIIIa by Surface Plasmon Resonance (SPR) Analysis
  • Endo-glycosidases Endo-S, Endo-S2, Endo-S2 mutant (D184Q), and the a-L- fucosidase from Bacteroides fragilis NCTC 9343 were expressed in Escherichia coli and the purification of enzymes was performed using Ni-NTA agarose beads.
  • the column was washed with a Tris-HCl buffer (50 mM, pH 7.4, 20 mL).
  • the bound IgG was released with glycine-HCl (100 mM, pH 3.0, 10 mL), and the elution fractions were immediately neutralized with Tris- HCl buffer (1.0 M, pH 8.3).
  • the fractions containing the antibody were combined and concentrated by centrifugal filtration (Amicon Ultra centrifugal filter, Millipore, Billerica, MA) to give mono-GlcNAc Rituximab (2.4 mg).
  • a glycan oxazoline was added to the mixture of an Endo-S2 D184Q and Mono- GlcNAc Rituximab in 50 mM Tris buffer (pH 7.4). The solution was incubated for 30 min at 37 o C. Then, the reaction mixture was purified with protein-A affinity column, followed by an anion exchange column of Capto Q (GE Healthcare) to collect the desired product.
  • LC-MS/MS experiments were performed on a LTQFT Ultra (linear quadrupole ion trap Fourier transform ion cyclotron resonance) mass spectrometer (Thermo Electron, San Jose, CA) equipped with a nanoelectrospry ion source (New Objective, Inc.), an Agilent 1100 Series binary high-performance liquid chromatography pump (Agilent Technologies, Palo Alto, CA), and a Famos autosampler (LC Packings, San Francisco, CA).
  • the digestion solution (6 mL) was injected at the 10 mL/min flow rate to a self-packed precolumn (150 mm I.D.
  • SPR Surface Plasmon Resonance
  • the RRVs were measured in triplicates by following the experimental procedure reported previously. 34
  • Sialylation and fucosylation of epidermal growth factor receptor suppress its dimerization and activation in lung cancer cells.
  • Sialylglycosides as Selective Inhibitors of Influenza Hemagglutinin and

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Abstract

Disclosed are a method of preparing a saccharide that contains a 3-fluoro-sialic acid and a method of bonding it to a homogeneous antibody. Also within the scope of this invention are compounds each containing a 3-fluoro-sialic acid, monoclonal antibodies bonded to α2,6-linked 3-fluoro-sialoside terminated N-glycans, and treatment of cancer with such monoclonal antibodies.

Description

SIALIDASE-RESISTANT SACCHARIDE AND
METHOD OF MAKING AND USING THE SAME BACKGROUND
Sialic acid is a negatively charged monosaccharide often displayed at the outmost end of glycans on glycolipids and glycoproteins, which are involved in many physiological intra- and intercellular processes, including interactions with other biomolecules and receptors on cells, viruses, and bacteria.1 In addition, sialylation plays an important role in regulating the function and fate of secreted glycoproteins and membrane-bound receptors. For example, sialylation of the epidermal growth factor receptor (EGFR) was shown to inhibit EGFR dimerization, thus interfering with EGF binding and phosphorylation, which is associated with tumorgenesis.2 Also, sialylation modulates the half-life of glycoproteins in blood circulation as desialylation of N-glycans exposes the underlining galactose, which is recognized by the hepatic asialoglycoprotein receptors leading to a rapid removal of the glycoprotein from circulation.3 Hence, increasing the degree of sialylation could improve the half-life and undesirable effects of glycoprotein therapeutics.
In recent years, the role of glycosylation on protein structure and function has been intensively studied inspiring the development of new methods for glycan synthesicampillary and glycoengineering of proteins, particularly therapeutic monoclonal antibodies (mAbs).5 For instance, it has been shown that afucosylated biantennary N-glycan with terminal a-2,6- linked sialic acids has the optimal glycan structure for the enhancement of antibody- dependent cellular cytotoxicity (ADCC), complement-dependent cytotoxicity (CDC) and anti-inflammatory activities.6
Sialic acid derivatives with fluorine at the C-3 position are known to inhibit sialyltransferases and sialidases (or neuraminidases) and are more stable.7 However, glycosylation with fluorinated sugars as donors often present a major challenge due to the strong electronic effect of the fluorine group that inactivates glycosylation reaction.
Although there is a sialyltransferase capable of transferring a 3-fluoro-sialic acid residue from the corresponding cytidine monophosphate-sialic acid to form an a-2,3-linked sialoside, there is no corresponding a-2,6-sialyltransferase available.11
Thus, there is a need to provide a method for reliably preparing saccharides containing a-2,6-linked 3-fluoro-sialosides, which can be used for developing glycoprotein therapeutics. SUMMARY
An aspect of the present invention is a method of preparing a saccharide that contains a 3-fluoro-sialic acid. The method includes conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
Another aspect of this invention is a method of preparing a homogeneous antibody bonded to a saccharide that contains a 3-fluoro-sialic acid. The method is carried out by glycosylating a monoclonal antibody with the saccharide.
An additional aspect of this invention relates to compounds of formula (VI):
Figure imgf000003_0001
in which R1 is Ac or H, R2 is Bz or H, R3 is methyl or H, R4 is Bn or H, and X is OH, a leaving group, or a saccharide. Note that“Ac” represents acetyl,“Bz” represents benzoyl, “Bn” represents benzyl, and the saccharide can be a monosaccharide, a disaccharide, or an oligosaccharide.
Also within the scope of the present invention is a monoclonal antibody bonded to an a2,6-linked 3-fluoro-sialoside terminated N-glycan.
Further covered by this invention is a method of treating a cancer. The method includes administering to a subject in need thereof an effective amount of a monoclonal antibody bonded to an a2,6-linked 3-fluoro-sialoside terminated N-glycan.
The details of the invention are set forth in the description below. Other features, objects, and advantages of the invention will be apparent from the following detailed description of several embodiments, and also from the appending claims. BRIEF DESCRIPTION OF THE DRAWINGS
The description below refers to the accompanying drawings, of which:
FIG.1A shows two graphs depicting enzyme-catalyzed hydrolysis of three sialosides, i.e., 1, 2, and S27, as a function of enzyme concentration; and FIG.1B shows two graphs depicting sialidase inhibition as a function of the concentration of 2, S27, or 2-deoxy-2,3- didehydro-N-acetylneuraminic acid (DANA), a sialidase inhibitor. FIG.2 is a stained electrophoresis gel of four N-glycans: (1) rituxan-G, (2) rituxan- Fax-SCT, (3) rituxan-SCT, and (4) commercial rituxan.
FIG.3 shows mass spectra obtained for three N-glycans , i.e., rituxan-Fax-SCT, rituxan-SCT, and rituxan. DETAILED DESCRIPTION
Disclosed first in detail herein is a method of preparing a saccharide that contains a 3- fluoro-sialic acid.
To reiterate, the method includes the steps of conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid. The saccharide can be a monosaccharide, a disaccharide, or an oligosaccharide. In an exemplary method, the saccharide is a monosaccharide.
In certain embodiments of this method, the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxy-sialic acid, and the glycosylation reaction is conducted in the presence of silver trifluoromethanesulfonate (AgOTf) and disodium phosphate (Na2HPO4). Preferably, the glycosylation reaction is conducted in toluene.
In other embodiments of this method, the fluorinating agent is perfluoro-1- butanesulfonyl fluoride (NfF), and the fluorination reaction is conducted in the presence of a catalyst. For example, the catalyst is 1,8-diazabicyclo[5,4,0]-undec-7-ene (DBU).
Preferably, the fluorination reaction is conducted in toluene. Of note, this reaction can be conducted further in the presence of tris(dimethylamino)sulfonium difluorotrimethylsilicate (TASF).
In an exemplary method, the 3-hydroxy-sialic acid is of formula (I):
Figure imgf000004_0001
the saccharide is a compound of formula (II):
Figure imgf000004_0002
the a2,6-linked 3-hydroxy-sialoside is a compound of formula (III):
Figure imgf000005_0001
and
the saccharide containing a 3-fluoro-sialic acid is a compound of formula (IV):
Figure imgf000005_0002
In additional embodiments, the method further includes conducting another glycosylation reaction by reacting the saccharide containing a 3-fluoro-sialic acid with a second saccharide.
Also within the scope of this invention is a method of preparing a homogeneous antibody bonded to a saccharide containing a 3-fluoro-sialic acid. Again, this method includes glycosylating a monoclonal antibody with a saccharide containing a 3-fluoro-sialic acid.
In certain embodiments of this method, the saccharide containing a 3-fluoro-sialic acid is obtained by the method, and embodiments thereof, described above, which includes the steps of conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside and conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
In other embodiments, the saccharide containing a 3-fluoro-sialic acid is an a2,6- linked 3-fluoro-sialoside terminated N-glycan, which can be of formula (V):
Figure imgf000006_0001
in which Z is
Figure imgf000006_0002
Another aspect of this invention relates to compounds of formula (VI):
Figure imgf000006_0003
R1, R2, R3, R4, and X are defined in the SUMMARY section above.
In one embodiment, the compound is of formula (IV):
Figure imgf000006_0004
.
In yet another embodiment, the compounds of formula (VI) each includes X being an N-glycan. An exemplary compound of this embodiment is of formula (V):
Figure imgf000007_0001
,
in which Z is
Figure imgf000007_0002
The present invention also covers a monoclonal antibody bonded to a saccharide containing a 3-fluoro-sialic acid, the saccharide containing a 3-fluoro-sialic acid being an a2,6-linked 3-fluoro-sialoside terminated N-glycan. Preferably, the a2,6-linked 3-fluoro- sialoside terminated N-glycan is of formula (V) shown above.
Further covered by this invention is a method of treating a cancer or an autoimmune disease, which includes administering to a subject in need thereof an effective amount of an above-described monoclonal antibody. For example, the cancer can be leukemia or lymphoma, and the autoimmune disease can be rheumatoid arthritis, autoimmune hemolytic anemia, pure red cell aplasia, thrombotic thrombocytopenic purpura, idiopathic
thrombocytopenic purpura leukemia, lymphoma, Evans syndrome, vasculitis, bullous skin disorders, type 1 diabetes mellitus, Sjogren’s syndrome, anti-NMDA receptor encephalitis, Devic’s disease, Graves’ ophthalmopathy, autoimmune pancreatitis, opsoclonus myoclonus syndrome, or a IgG4-related disease.
The term“treating” or“treatment” herein refers to administering a pharmaceutical composition described above to a subject, who has an above-described disease, i.e., cancer, a symptom of such a disease, or a predisposition toward such a disease, with the purpose of conferring a therapeutic or prophylactic effect. The term“an effective amount” refers to the amount of an active drug that is required to confer such effect. Effective doses will vary, as recognized by those skilled in the art, depending on the types of disease treated, route of administration, excipient usage, and the possibility of co-usage with other therapeutic treatment.
Provided below are more detailed descriptions of certain specific aspects of the present invention.
3-fluoro-substitued sialic acid derivatives, compared to non-fluorinated sialic acid derivatives, are known to be more stable towards sialidases.7 By introducing the fluorine atoms to the anomeric and C-3 positions, a 2,3-difluorosialic acid (DFSA) was developed (Scheme 1)8 and used as a biochemical probe,9 and the activity-based protein profiling probe to study sialidases.10 With the help of DFSA, it was shown that the fluorine atom at the axial position at C-3 (3Fax) has a greater effect on slowing down both the deactivation (ki) and reactivation (khydr) of the enzyme than the 3Feq derivative.8b Inspired by this observation, we wanted to investigate the stability of sialosides with 3-fluorosialic acids for their potential use in glycoprotein therapeutics. Specifically, we intend to study if incorporation of a 3Fax- Neu5Ac motif at the terminal end of N-glycan on a mAb could increase its stability towards sialidases and sustain its effector functions.
Towards our goal, we developed a preparative method for the synthesis of a2,6-linked 3Fax-Neu5Ac oligosaccharides, including the biantennary N-glycan. We also showed that the synthetic 3-FaxNeu5Ac-a2,6-Gal linkage is more stable in the presence of sialidases and the antibody with the corresponding biantennary glycan has the same binding avidity as that of the non-fluorinated counterpart.
Several methods were reported for the synthesis of 3F-Neu5Ac, including (a) fluorination of protected glycans with XeF2-BF3×OEt2,12 molecular fluorine13 and
Selectfluor;7c (b) inversion of equatorial hydroxyl group at C3 in a sialic acid derivative;7f and (c) aldolase-catalyzed enzymatic transformation of ManNAc and 3-fluoro-pyruvate into 3FeqNeu5Ac and 3FaxNeu5Ac.7a, 11a, 14 However, to the best of our knowledge, there is no method describing the synthesis of N-glycans terminated with 3Fax-Neu5Ac so far. The only account disclosing the preparation of disaccharides with 3Fax-Neu5Ac was limited to the enzymatic synthesis of 3-FaxNeu5Ac-a2,3-Lac, and not the required a2,6-linkage.11a We, therefore, focused our effort on the chemical synthesis of this linkage.15
Figure imgf000009_0001
After screening a variety of glycosylation conditions using 3Fax-Neu5Ac-based donors (Scheme 2a), we investigated the alternative strategies, which encompassed the SN2 reaction of the 3OHeq to 3Fax in 3OH-Neu5Ac-a2,6-Gal-STol (Scheme 2b). First, we studied the sialylation at O-6 using conditions reported by Goto et al. (Table 1, entry 1).16 The reaction was carried out using 1 equiv. of AgOTf as a promoter and Na2HPO4 as a base in toluene at -10 °C (Scheme 3). These conditions provided disaccharide 6 in low yield (15%) with a 3:1 (a:b) anomeric ratio. Changing the solvent to CH2Cl2 did not improve the diastereoselectivity (entry 2). By increasing the temperature and reaction time, the yield was improved, however, the selectivity decreased dramatically (entries 3-5). Surprisingly, the more equivalents of acceptor were used, the better stereoselectivity was observed (entry 3 vs. 6). The optimized conditions (entry 7) provided 6 in 35% (99% brsm) yield with excellent a- selectivity (a:b = 13:1).
Figure imgf000009_0002
Figure imgf000010_0001
a
Figure imgf000010_0002
Determined by 1H NMR. bYield of isolated product. cYield based on the recovered starting material (brsm), acceptor. dThe donor and acceptor were not completely consumed. eUsing
CH2Cl2 with 4Å MS. fWith 4Å MS. gGram-scale.
Inversion of OHeq to Fax turned out to be a challenging task. Substitution of OTf and OMs by fluorine using TASF led to decomposition of the starting material. To optimize this transformation, we screened a variety of fluorinating reagents without any success. However, treatment of 6 with perfluoro-1-butanesulfonyl fluoride (NfF) in the presence of 1,8- diazabicyclo[5,4,0]-undec-7-ene (DBU) in anhydrous toluene (Scheme 3) for 2 days at 90 oC gave 4 in 6 % yield (Table 2, entry 1).17 Further optimization of the reaction conditions, such as decreasing reaction temperature (entries 1, 5 and 6) and increasing reaction times (entry 7), improved the overall yield of 4. It seems that the transformation of 7 to 4 is a rate-limiting step due to the steric hindrance around C-3. In many cases, we were able to isolate 7 formed in the presence of NfF and DBU at room temperature within 1 day. However, conversion of 7 to 4 (77% brsm yield) requires long reaction times. The attempts to improve the conversion by elevating reaction temperature resulted in decomposition of 7. Thus, our best result was obtained by increasing amounts of reagents and reaction times to 15 days (entry 8). Finally, we found that addition of TASF helped improve the reaction efficiency reducing the reaction time to only 2 days (entry 9). The stereochemistry of fully protected 3Fax-Neu5Ac-a2,6-Gal- STol disaccharide (4) was verified by the X-ray diffraction analysis.
Figure imgf000011_0001
Figure imgf000011_0002
aReagents and conditions: (a) NfF, DBU, toluene, 40 oC, 15 d, 49% (77% brsm). bYield of isolated product. cNo product observed. dPortion-wise addition of NfF (4 equiv./day) and DBU (4 equiv./day) followed by stirring for 14 days. ePortion-wise addition of NfF (4 equiv./day), DBU (4 equiv./day) and tris(dimethylamino)sulfonium difluorotrimethylsilicate
(TASF) (2 equiv./day). Referring to Scheme 5, the 3Fax-Neu5Ac-disaccharide donor 4 was coupled with the acceptor (8) using NIS/TMSOTf to give 9. Next, the O-allyl group at the anomeric position was removed by isomerization with PdCl2 in AcOH/NaOAc, and the anomeric hydroxyl group (10) was further transformed into fluoride (11) and imidate (12). The glycosylation of the core disaccharide (13) at O-3 with 3Fax-Neu5Ac-terminated fluoride donor (11) using Cp2HfCl2/AgOTf conditions gave hexasaccharide 14 in 85% yield. After removal of the benzylidene group, 15 was glycosylated at the O-6 position to give the desired
decasaccharide (16) in 70% yield with excellent regio- and a-stereoselectivity. We also tested the TfOH-promoted glycosylation with N-phenyl trifluoroacetimidate donor (12), which, however, gave the product in a poor yield. Next, the fully deprotected glycan (17) was obtained in 40% overall yield following a sequence of steps: (a) saponification with LiOH to remove the esters and the NHTroc group; (b) acetylation of free amines and alcohols; (c) removal of the OAc groups with sodium methoxide; and (d) hydrogenolysis of the O-benzyl groups with Pd/C in a mixture of MeOH/water/HCO2H.4b
Figure imgf000012_0001
Reagents and conditions in Scheme 5: (a) 8, TfOH, NIS, 4Å MS, CH2Cl2, -40 oC, 2 h, 64%. (b) PdCl2, CH3COONa, AcOH/H2O, 82%. (c) DAST, CH2Cl2, -20 oC, 73%. (d) ClC(=NPh)CF3, Cs2CO3, CH2Cl2, 0 oC to r.t., 3 h, 56%; (e) 11, AgOTf, Cp2HfCl2, toluene, 4Å MS, 0 oC, 3 h, 85 %; (f) pTSA•H2O, CH3CN, r.t., 6 h, 75%; (g) 11, AgOTf, Cp2HfCl2, toluene, 4Å MS, -15 oC, 3 h, 70 % (80% brsm); (h) 12, TfOH, CH2Cl2, 4Å MS, -60 to -20 oC, 3 h, 33 % (55% brsm); (i) LiOH, dioxane/H2O (4:1), 90 oC, 16 hrs; (j) Ac2O, Py, 16 h; (k) NaOMe, MeOH, 16 h; (l) Pd(OH)2, MeOH/H2O/HCOOH (6:3:1), H2, 16 h, 40% (4 steps).
Having established a protocol for the stepwise synthesis, we streamlined the glycan assembly by developing a programmable [2+2+2] one-pot synthesis of hexasaccharide (14), which is a precursor of 17 (Scheme 6). The designed one-pot protocol was comprised of the initial coupling of the 3Fax-Neu5Ac-disaccharide donor (4) (RRV = 2053) with a less reactive acceptor (18) (RRV = 537) at -40 oC, followed by injection of the reducing-end acceptor 13 at – 20 oC. After 1 h at -10 oC and a standard purification protocol, the hexasaccharide 14 was isolated in 26% yield.
Figure imgf000013_0001
Reagents and conditions in Scheme 6: (a) TfOH, NIS, 4Å MS, CH2Cl2, -40 oC to -10 oC, 3 h, 26%
In order to gather preliminary data about the stability of the 3Fax-Neu5Ac-a2,6-Gal motif in the presence of sialidases, we prepared Neu5Ac-a2,6-Gal-pNP (1) and the 3Fax- Neu5Ac analog (2) as substrates (Scheme 1) for the in vitro assay19 with the commercially available sialidases from C. perfingens and V. cholera. Both enzymes showed the expected hydrolytic activity for the native substrate 1 but were inactive toward the 3Fax-analog 2 (see FIG.1A). We also observed that 2 did not significantly inhibit the hydrolysis of 1 as DANA did (see FIG.1B).
To prepare a homogeneous glycoform of mAb, compound 17 was converted into the oxazoline donor and ligated to the GlcNAc-primed IgG (without core fucose) in the presence of Endo S2 (D184Q) following a standard protocol.6 The binding avidity of the
homogeneous 3Fax-Neu5Ac-glycoform to FcgRIIIa was measured by surface plasma resonance analysis6 together with the parent nonfluorinated glycoform (G2S2) and a commercial sample of rituximab (major glycoforms: G1F1, G0F1, G2F1). When compared to the commercial sample of rituximab, the homogeneous glycoforms of IgG bearing biantennary N-glycans with a2,6-sialaylation and without core fucose demonstrated 39.9-fold (Neu5Ac-G2S2) and 37.4-fold (3Fax-Neu5Ac-G2S2) improvement in binding avidity (see Table 4). The fact that the avidity of the 3Fax-Neu5Ac-modified glycoform was found to be within the same range as that of the parent glycan provides a premise for the in vivo studies of 3Fax-Neu5Ac-glycosylated mAb. These results will be reported in a due course.
In conclusion, we have developed a chemical synthesis of 3Fax-Neu5Ac-a2,6-Gal- STol as building block for the synthesis of sialidase-resistant oligosaccharides and a representative homogeneous antibody with 3Fax-Neu5Ac-terminated bi-antennary N-glycan. When compared with the commercial rituximab sample, the homogeneous glycoform modified with 3Fax-Neu5Ac-glycans showed a 37.4-fold improvement in binding to the FcgRIIIa. Moreover, the parent nonfluorinated and 3Fax-Neu5Ac-modified antibody glycoforms demonstrated similar binding avidity to an Fc receptor. Overall, our results have revealed a new general strategy for the improvement of half-lives of therapeutic
glycoproteins.
Without further elaboration, it is believed that one skilled in the art can, based on the above description, utilize the present invention to its fullest extent. The following specific examples are, therefore, to be construed as merely illustrative, and not limitative of the remainder of the disclosure in any way whatsoever. All publications cited herein are incorporated by reference in their entirety. EXAMPLE 1: Synthesis of saccharides containing a 3-fluoro-sialic acid and precursors All reactions were carried out under an inert atmosphere unless mentioned otherwise, and standard syringe–septa techniques were followed. Solvents were purchased from commercial sources and used without further purification. Pulverized molecular sieves 4Å (EMD Millipore) were grounded in powder and activated before use. The progress of all the reactions was monitored by TLC glass plates precoated with silica gel 60 F254 (Merck KGaA). The TLC was visualized by UV light (254 nm), p-anisaldehyde and/or ceric ammonium molybdate stains. Column chromatography was performed on Across silica gel (particle size 0.035– 0.070 mm, 60Å).1H, 13C, and 19F NMR spectra were recorded with Bruker AVIII-600, DRX-500, AV-400, DPX-400, AVANCE 500 AV and AVANCE 600 spectrometers at 25 oC and chemical shifts were measured in d (ppm) with residual solvent peaks as internal standards (d, ppm: 7.24 (CHCl3), 4.80 (H2O) in 1H NMR; and 77 (CDCl3) in 13C NMR). Coupling constants (J) were measured in Hz. Data are represented as follows: chemical shift, multiplicity (s = singlet, d = doublet, t = triplet, q = quartet, m = multiplet, br = broad). High-resolution mass spectra (HRMS) were recorded on an Agilent LC/MSD TOF mass spectrometer by electrospray ionization time-of-flight (ESI-TOF) reflectron experiments. The single crystal X-ray diffraction studies were carried out on a Bruker D8 Platinum-135 CCD diffractometer equipped with Cu Ka radiation ( ^ = 1.5478). HPLC measurements were performed on a Hitachi HPLC D-7000 system. RRV measurements were recorded using a normal-phase ZORBAX RX-SIL, 5µm, 4.6 x 250mm (Colloidal Silica, Agilent Technologies) using the solvent system EtOAc/hexane with 1 mL/min flow rate, and visualized at 254 nm.
Figure imgf000015_0001
p-Tolyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-5-deoxy-D-erythro-a-L-gluco- non-2- ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-1-thio-b-D- galactopyranoside 6a. A mixture of acceptor 3 (1.05 g, 1.80 mmol, 1 equiv.) and donor 5 (1.02 mg, 1.80 mmol, 1 equiv.) in anhydrous toluene (60 mL) was stirred under argon atmosphere for 10 min. Then, the reaction mixture was cooled to -50 °C and dry Na2HPO4 (1.07 g, 7.54 mmol, 4.2 equiv.) was added, followed by AgOTf (692 mg, 2.69 mmol, 1.5 equiv., in toluene 18 mL) with stirring. Upon completion of the reaction (TLC indicated the disappearance of starting materials after 24 hrs), the reaction mixture was diluted with EtOAc (80 mL), washed with 20% aq. Na2S2O3 (10 mL), satd. aq. NaHCO3 (5 mL) and brine (5 mL), then the organic layer was dried over MgSO4, filtered, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/toluene (3:7) as eluent to give compound 6 (a:b = 13:1) as a white powder (680 mg, 35%) along with recovered acceptor 3 (670 mg, 99% brsm). a-anomer 6a: Rf = 0.36 (silica gel, CHCl3:MeOH = 20:1); 1H NMR (600 MHz, CDCl3): d 7.96-7.94 (m, 2H, Ar-H), 7.91-7.90 (m, 2H, Ar-H), 7.50-7.47 (m, 2H, Ar-H), 7.40-7.39 (m, 2H, Ar-H), 7.37-7.32 (m, 5H, Ar-H), 7.25-7.18 (m, 4H, Ar-H), 7.06-7.04 (m, 2H, Ar-H), 5.81 (dd, J = 10.2.9.6 Hz, 1H), 5.59 (d, J = 10.2 Hz, 1H), 5.38 (dd, J = 9.0, 3.0 Hz, 1H), 5.35-5.32 (m, 1H), 5.25 (dd, J = 10.2, 9.6 Hz, 1H), 5.24 (d, J = 7.8, 2.4 Hz, 1H), 4.92 (d, J = 9.6 Hz, 1H, C1-Hb), 4.71 (d, J = 12.0 Hz, 1H), 4.60 (d, J = 12.0 Hz, 1H), 4.49 (dd, J = 10.8, 1.8 Hz, 1H), 4.30 (dd, J = 12.6, 3.0 Hz, 1H), 4.26 (ddd, J = 10.2, 10.2, 10.2 Hz, 1H), 4.20 (d, J = 3.0 Hz, 1H), 4.10 (dd, J = 10.2, 7.2 Hz, 1H), 4.04 (dd, J = 12.6, 6.6 Hz, 1H), 4.00 (dd, J = 6.6, 6.6 Hz, 1H), 3.86 (d, J = 9.6 Hz, 1H), 3.82-3.73 (m, 2H), 3.75 (s, 3H, -CH3), 2.30 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 2.07 (s, 3H, -CH3), 2.06 (s, 3H, -CH3), 1.96 (s, 3H, -CH3), 1.89 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.6, 170.6, 170.3, 170.1, 169.5, 168.5, 165.8, 165.1, 138.0, 137.9, 133.4, 133.1, 129.8, 129.7, 129.6, 128.9, 128.6, 128.4, 128.3, 128.2, 127.7, 127.6, 100.3, 86.6, 75.9, 74.5, 73.7, 73.2, 73.1, 72.5, 68.8, 68.3, 63.1, 62.5, 52.8, 48.4, 23.1, 21.2, 20.9, 20.8, 20.7, 20.7; HRMS (ESI- TOF) m/e : Calcd for C54H59NO20SNa [M+Na]+: 1096.3243 found 1096.3241.
Figure imgf000016_0001
p-Tolyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-5-deoxy-D-erythro-b-L-gluco- non-2- ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-1-thio-b-D- galactopyranoside 6b. b-anomer 6b Rf = 0.42 (silica gel, CHCl3:MeOH = 20:1); 1H NMR (600 MHz, CDCl3): d 7.94-7.92 (m, 4H, Ar-H), 7.50-7.47 (m, 2H, Ar-H), 7.43-7.40 (m, 6H, Ar-H), 7.37-7.31 (m, 5H, Ar-H), 7.13-7.12 (m, 2H, Ar-H), 5.81 (dd, J = 10.2.10.2 Hz, 1H), 5.51 (dd, J = 10.2, 3.0 Hz, 1H), 5.22 (ddd, J = 6.0, 6.0, 3.0 Hz, 1H), 5.14 (d, J = 13.2 Hz, 1H), 5.07 (dd, J = 6.0, 2.4 Hz, 1H), 4.90 (d, J = 10.2 Hz, 1H, C1-Hb), 4.66-4.62 (m, 2H), 4.55 (dd, J = 12.6, 2.4 Hz, 1H), 4.29 (d, J = 1.8 Hz, 1H), 4.14 (dd, J = 7.8, 7.2 Hz, 1H), 4.08 (ddd, J = 10.8, 10.8, 10.8 Hz, 1H), 3.98 (dd, J = 12.6, 6.6 Hz, 1H), 3.92-3.88 (m, 2H), 3.85-3.77 (m, 3H), 3.83 (s, 3H, -CH3), 3.53 (dd, J = 10.8, 2.4 Hz, 1H), 2.32 (s, 3H, -CH3), 2.26 (s, 3H, - CH3), 2.07 (s, 3H, -CH3), 2.04 (s, 3H, -CH3), 1.97 (s, 3H, -CH3), 1.68 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.4, 170.6, 170.3, 169.8, 169.8, 166.6, 165.8, 165.2, 139.2, 138.4, 133.5, 133.4, 133.1, 129.9, 129.8, 129.5, 128.9, 128.5, 128.3, 127.2, 126.0, 99.6, 86.9, 76.0, 75.5, 74.3, 73.1, 72.5, 71.7, 70.3, 68.4, 67.2, 62.1, 62.0, 53.3, 47.5, 22.9, 21.5, 21.2, 20.8, 20.7, 20.7; HRMS (ESI-TOF) m/e : Calcd for C54H59NO20S [M+H]+: 1074.3424 found 1074.3458.
Figure imgf000016_0002
p-Tolyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D- erythro- a-L-manno-non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-1- thio-b-D-galactopyranoside 4. To a solution of compound 6a (500 mg, 0.47 mmol, 1 equiv.) in toluene (5 mL) in a screw-capped vial containing a stirring bar was added DBU (0.28 mL, 1.86 mmol, 4 equiv.), perfluoro-1-butanesulfonyl fluoride (0.33 mL, 1.86 mmol, 4 equiv.) and TASF (256 mg, 0.93 mmol, 2 equiv.). The reaction vial was sealed and stirred at 40 oC. After 24 h, the reaction mixture was treated with additional amounts of DBU (0.28 mL, 1.86 mmol, 4 equiv.), perfluoro-1-butanesulfonyl fluoride (0.33 mL, 1.86 mmol, 4 equiv.) and TASF (256 mg, 0.93 mmol, 2 equiv.), then stirred at 40 oC for another 24 h. The reaction mixture was directly loaded onto the silica gel column and eluted with
acetone/toluene (7:3). The disaccharide 4 was obtained as a light yellow powder (300 mg, 60%) along with perfluoro-1-butanesulfonyl compound 7 as a light yellow powder (50 mg, 8%).
Synthesis of the disaccharide 4 from 7: To a solution of compound 7 (730 mg, 0.54 mmol, 1 equiv.) in toluene (7 mL) in a screw-capped vial containing a stirring bar was added DBU (0.64 mL, 4.31 mmol, 8 equiv.) and perfluoro-1-butanesulfonyl fluoride (0.77 mL, 4.31 mmol, 8 equiv.). The container was sealed and stirred at 40 oC for 15 days. The reaction mixture was directly loaded onto the silica gel column and eluted with acetone/toluene (7:3) as eluent; disaccharide 4 was isolated as a light yellow powder (282 mg, 49%) along with perfluoro-1-butanesulfonyl compound 7 as a light yellow powder (267 mg, 77% brsm). Rf = 0.43 (silica gel, acetone/toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 7.95-7.93 (m, 2H, Ar- H), 7.87-7.85 (m, 2H, Ar-H), 7.48-7.44 (m, 2H, Ar-H), 7.41-7.39 (m, 2H, Ar-H), 7.35-7.33 (m, 2H, Ar-H), 7.31-7.29 (m, 2H, Ar-H), 7.25-7.24 (m, 2H, Ar-H), 7.21-7.19 (m, 2H, Ar-H), 7.16-7.14 (m, 1H, Ar-H), 7.04-7.03 (m, 2H, Ar-H), 5.79 (dd, J = 10.2.9.6 Hz, 1H), 5.49 (ddd, J = 9.0, 5.4, 2.4 Hz, 1H), 5.42 (dd, J = 10.2, 3.0 Hz, 1H), 5.31-5.28 (m, 2H), 5.20 (dd, J = 27.0, 11.4 Hz, 1H, sia-C4-H), 5.01 (dd, J = 51.6, 1.8 Hz, 1H, sia-C3-H), 4.97 (d, J = 10.2 Hz, 1H, C1-Hb), 4.66 (d, J = 11.4 Hz, 1H), 4.58 (d, J = 11.4 Hz, 1H), 4.37 (dd, J = 12.6, 2.4 Hz, 1H), 4.28-4.26 (m, 2H), 4.17 (dd, J = 12.6, 5.4 Hz, 1H), 4.09-4.05 (m, 2H), 3.98 (dd, J = 10.2, 6.0 Hz, 1H), 3.74 (dd, J = 10.2, 8.4 Hz, 1H), 3.72 (s, 3H, -CH3), 2.29 (s, 3H, -CH3), 2.17 (s, 3H, -CH3), 2.16 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 1.98 (s, 3H, -CH3), 1.91 (s, 3H, - CH3); 13C NMR (150 MHz, CDCl3): d 170.9, 170.7, 170.4, 170.2, 169.8, 165.6, 165.3, 138.3, 137.6, 133.2, 133.0, 132.6, 129.8, 129.8, 129.7, 129.5, 129.3, 129.1, 128.4, 128.3, 128.1, 127.5, 127.3, 98.3, 98.2, 88.1, 86.8, 86.4, 76.2, 75.6, 74.6, 74.0, 71.4, 69.2, 69.0, 68.5, 68.0, 67.3, 63.4, 62.5, 53.2, 45.5, 23.4, 21.2, 21.2, 20.8, 20.7, 20.7; 19F NMR (376 MHz, CDCl3): d -215.9; HRMS (ESI-TOF) m/e : Calcd for C54H58FNO19SNa [M+Na]+: 1098.3200 found 1098.3212.
Figure imgf000018_0001
p-Tolyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-5-deoxy-3-O-(perfluoro-1- butane) sulfonyl-D-erythro-a-L-gluco-non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl- 4-O-benzyl-1-thio-b-D-galactopyranoside 7. Rf = 0.59 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 7.95-7.94 (m, 2H, Ar-H), 7.90-7.89 (m, 2H, Ar-H), 7.49-7.45 (m, 2H, Ar-H), 7.40-7.39 (m, 2H, Ar-H), 7.36-7.30 (m, 4H, Ar-H), 7.27-7.26 (m, 2H, Ar-H), 7.25-7.18 (m, 3H, Ar-H).7.04-7.03 (m, 2H, Ar-H), 5.82 (dd, J = 10.2.9.6 Hz, 1H), 5.62-5.38 (m, 4H), 5.26 (d, J = 9.0 Hz, 1H), 4.96-4.94 (m, 2H, C1-Hb), 4.70-4.64 (m, 3H), 4.35-4.30 (m, 1H), 4.22-4.20 (m, 2H), 4.09 (dd, J = 9.6, 6.0 Hz, 1H), 4.02 (dd, J = 12.6, 6.0 Hz, 1H), 3.98 (dd, J = 6.6, 6.0 Hz, 1H), 3.93 (dd, J = 10.2, 7.2 Hz, 1H), 3.76 (s, 3H, -CH3), 2.29 (s, 3H, -CH3), 2.17 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 2.06 (s, 3H, -CH3), 1.94 (s, 3H, -CH3), 1.90 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.6, 170.2, 170.1, 169.3, 167.0, 165.7, 165.2, 138.1, 137.7, 133.2, 133.0, 132.5, 129.8, 129.7, 129.7, 129.5, 129.1, 129.0, 128.4, 128.3, 128.1, 128.0, 127.5, 127.4, 97.8, 86.5, 83.4, 75.7, 74.6, 74.2, 72.6, 70.0, 68.4, 67.9, 66.5, 64.5, 62.4, 53.1, 49.0, 23.0, 21.1, 20.9., 20.7, 20.6, 20.3; 19F NMR (376 MHz, CDCl3): d -126.2, -126.2, -121.5, -121.5, -110.4, -110.4, -81.0, -80.9, -80.9; HRMS (ESI-TOF) m/e : Calcd for C58H58F9NO22S2Na [M+Na]+: 1378.2640 found 1378.2644.
Figure imgf000018_0002
Allyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D-erythro- a -L-manno-non-2-ulopyranosonate]-(2®6)-[2,3-di-O-benzoyl-4-O-benzyl-1-b-D- galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-a-D- mannopyranoside 9. A mixture of acceptor 8 (1.04 g, 1.03 mmol, 1 equiv.), donor 4 (1.39 g, 1.29 mmol, 1.25 equiv.) and activated pulverized 4 Å MS (0.70 g) in anhydrous CH2Cl2 (7 mL) was stirred under argon for 1 h. Then, the reaction mixture was cooled to -40 °C and NIS (465 mg, 2.06 mmol, 2 equiv.) was added, followed by TfOH (0.5 M in Et2O, 0.62 mL, 0.31 mmol, 0.3 equiv.) with stirring. Upon completion of the reaction (TLC indicated the disappearance of starting materials after ~2 hrs), the reaction mixture was quenched with Et3N (0.4 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (30 mL), washed with 20% aq. Na2S2O3 (10 mL), satd. aq. NaHCO3 (15 mL) and brine (8 mL). The separated organic layer was dried over MgSO4, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent to give compound 9 as a white powder (1.30 g, 64%). Rf = 0.51 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 7.90-7.88 (m, 4H, Ar-H), 7.48-7.45 (m, 2H, Ar-H), 7.34-7.22 (m, 24H, Ar-H), 7.18-7.13 (m, 10H, Ar-H), 5.85-5.78 (m, 2H), 5.47-5.44 (m, 1H), 5.35-5.32 (m, 4H), 5.24-5.16 (m, 2H), 5.11 (dd, J = 10.2, 1.2 Hz, 1H), 5.06-4.97 (m, 3H, C1- Hb), 4.85-4.73 (m, 4H, C1-Ha, C1-Hb), 4.70-4.54 (m, 6H), 4.53-4.42 (m, 4H), 4.33-4.26 (m, 2H), 4.23-4.18 (m, 3H), 4.14-4.04 (m, 3H), 3.97-3.93 (m, 1H), 3.89-3.81 (m, 5H), 3.73-3.58 (m, 10H), 3.45-3.43 (m, 1H), 3.32-3.30 (m, 1H), 2.16 (s, 3H, -CH3), 2.13 (s, 3H, -CH3), 2.10 (s, 3H, -CH3), 2.01 (s, 3H, -CH3), 1.92 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.7, 170.6, 170.4, 170.2, 169.8, 165.6, 165.4, 165.4, 165.1, 153.8, 138.8, 138.6, 138.5, 138.2, 138.2, 138.1, 133.7, 133.2, 133.1, 133.1, 130.8, 130.0, 129.8, 129.6, 129.4, 129.0, 128.4, 128.3, 128.3, 128.2, 128.2, 128.2, 128.1, 128.1, 128.0, 128.0, 127.9, 127.6, 127.6, 127.5, 127.4, 127.3, 127.2, 125.2, 117.1, 100.0, 98.3, 98.2, 96.9, 95.6, 88.1, 86.8, 77.9, 75.0, 74.7, 74.6, 74.5, 74.2, 74.1, 73.9, 73.4, 73.3, 73.1, 73.0, 72.4, 71.9, 71.4, 70.9, 70.9, 69.5, 69.2, 69.1, 69.0, 68.0, 67.9, 67.2, 62.9, 62.3, 57.2, 53.2, 45.5, 23.3, 21.0, 20.7, 20.7, 20.6; 19F NMR (376 MHz, CDCl3): d -215.6; HRMS (ESI-TOF) m/e : Calcd for C100H108Cl3FN2O31Na [M+Na]+: 1979.5878 found 1979.5889.
Figure imgf000019_0001
[Methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D-erythro-a-L- manno- non-2-ulopyranosonate]-(2®6)-[2,3-di-O-benzoyl-4-O-benzyl-1-b-D- galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-a-D- mannopyranoside 10. To a stirred solution of tetrasaccharide 9 (578 mg, 0.30 mmol, 1 equiv.) in acetic acid (6.0 mL, acetic acid/water, 10:1 = v/v) was added CH3COONa (121 mg, 1.48 mmol, 5 equiv.) followed by addition of PdCl2 (105 mg, 0.59 mmol, 2 equiv.) at room temperature. After 20h, when TLC indicated the disappearance of starting material, the reaction mixture was diluted with ethyl acetate (20 mL) and poured into satd. aq. NaHCO3 (20 mL). The aqueous layer was extracted with ethyl acetate (2×10 mL), and the combined organic phases were dried over MgSO4, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/hexane (2:3) as eluent to give compound 10 as a white powder (465 mg, 82%). Rf = 0.23 (silica gel, acetone:hexane = 2:3); 1H NMR (600 MHz, CDCl3): d 7.90-7.87 (m, 4H, Ar-H), 7.48-7.45 (m, 2H, Ar-H), 7.34-7.20 (m, 24H, Ar-H), 7.19-7.12 (m, 10H, Ar-H), 5.80-5.75 (m, 1H), 5.45-5.43 (m, 1H), 5.33-5.28 (m, 3H), 5.21-4.89 (m, 5H , man-C1-Ha, man-C1-Hb, C1-Hb), 4.84-4.30 (m, 15H, C1-Hb), 4.27-3.79 (m, 12H), 3.78-3.43 (m, 12H), 2.13-2.12 (m, 6H, -2CH3), 2.09-2.08 (m, 3H, -CH3), 2.02-2.00 (m, 3H, -CH3), 1.91 (br, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d170.8, 170.7, 170.7, 170.7, 170.6, 170.5, 170.4, 170.3, 170.3, 170.2, 169.9, 169.8, 165.6, 165.6, 165.4, 165.2, 165.2, 154.0, 138.6, 138.5, 138.3, 138.2, 138.1, 133.2, 133.1, 129.8, 129.6, 129.5, 129.0, 128.4, 128.4, 128.3, 128.3, 128.2, 128.2, 128.2, 128.1, 128.0, 127.9, 127.9, 127.7, 127.7, 127.6, 127.5, 127.5, 127.4, 127.4, 127.3, 100.0, 99.5, 98.3, 98.2, 98.1, 95.8, 95.7, 92.3, 88.2, 88.1, 86.8, 76.1, 74.8, 74.7, 74.6, 74.6, 74.3, 74.2, 74.2, 73.9, 73.8, 73.3, 73.2, 73.1, 73.1, 72.7, 72.6, 72.4, 72.3, 71.6, 71.4, 71.2, 70.9, 70.8, 69.9, 69.5, 69.3, 69.2, 69.1, 69.0, 68.1, 68.0, 67.2, 67.1, 63.0, 62.3, 62.2, 62.1, 53.3, 53.3, 45.5, 45.4, 26.3, 23.3, 21.1, 20.8, 20.7, 20.7, 20.6, 20.6 ; 19F NMR (376 MHz, CDCl3): d -215.2, -215.7; HRMS (ESI-TOF) m/e : Calcd for C97H104Cl3FN2O31Na [M+Na]+: 1939.5565 found 1939.5619.
Figure imgf000020_0001
[Methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D-erythro-a-L- manno -non-2-ulopyranosonate]-(2®6)-[2,3-di-O-benzoyl-4-O-benzyl-1-b-D- galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-a-D- mannopyranosyl fluoride 11. To a well-stirred solution of hemiacetal 10 (395 mg, 0.21 mmol, 1 equiv.) in anhydrous CH2Cl2 (12 mL) was added DAST (81.6 mL, 0.62 mmol, 3 equiv.) at -20 oC. The reaction mixture was vigorously stirred until TLC indicated the disappearance of starting material (3 h). The reaction mixture was diluted with CH2Cl2 (10 mL) and washed with satd. aq. NaHCO3 (5 mL) and brine (4 mL). The organic phase was dried over MgSO4, filtered, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/hexane (3:4) as eluent to give compound 11 as a white powder (289 mg, 73%). Rf = 0.32 (silica gel, acetone:hexane = 3:4); 1H NMR (600 MHz, CDCl3): d 7.89-7.88 (m, 4H, Ar-H), 7.47-7.45 (m, 2H, Ar-H), 7.33-7.22 (m, 22H, Ar-H), 7.17-7.12 (m, 12H, Ar-H), 5.78 (dd, J = 10.2, 7.8 Hz, 1H), 5.53-5.40 (m, 2H), 5.33-5.29 (m, 3H, C1-Ha), 5.21 (dd, J = 27.6, 11.4 Hz, 1H, sia-C4-H), 5.05-4.96 (m, 2H, C1-Hb), 4.94 (d, J = 11.4 Hz, 1H), 4.82-4.79 (m, 4H, C1-Hb), 4.75-4.72 (m, 1H), 4.68-4.59 (m, 3H), 4.58-4.54 (m, 2H), 4.50-4.48 (m, 2H), 4.30 (dd, J = 12.6, 3.0 Hz, 1H), 4.26 (d, J = 10.2 Hz, 1H), 4.23- 4.15 (m, 4H), 4.08-4.04 (m, 2H), 3.95 (dd, J = 9.0, 8.4 Hz, 1H), 3.89-3.78 (m, 5H), 3.72-3.57 (m, 9H), 3.50-3.48 (m, 1H), 3.35 (d, J = 0.6 Hz, 1H) 2.14 (s, 3H, -CH3), 2.12 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 2.00 (s, 3H, -CH3), 1.91 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.8, 170.7, 170.4, 170.2, 169.9, 165.6, 165.4, 165.2, 153.9, 138.2, 138.1, 137.8, 133.2, 133.1, 129.8, 129.6, 129.4, 129.0, 128.4, 128.3, 128.2, 128.1, 128.0, 127.9, 127.7, 127.6, 127.6, 127.4, 127.3, 127.3, 106.9, 105.4, 99.8, 99.2, 98.3, 98.2, 95.6, 88.1, 86.8, 74.9, 74.8, 74.2, 74.0, 73.9, 73.8, 73.3, 73.2, 72.5, 71.4, 71.3, 70.9, 69.1, 69.1, 68.9, 68.0, 67.3, 62.8, 62.3, 56.9, 53.3, 45.6, 23.4, 21.1, 20.8 (2 C), 20.6; 19F NMR (376 MHz, CDCl3): d -138.6, - 215.7; HRMS (ESI-TOF) m/e : Calcd for C97H103Cl3F2N2O30Na [M+Na]+: 1941.5521 found 1941.5521.
Figure imgf000021_0001
(N-Phenyl)-2,2,2-trifluoroacetimidate [methyl 5-acetamido-4,7,8,9-tetra-O- acetyl- 3,5-dideoxy-3-fluoro-D-erythro-a-L-manno-non-2-ulopyranosonate]-(2®6)-[2,3- di-O-benzoyl-4-O-benzyl-1-b-D-galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2- (2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-D- mannopyranoside 12. To a well-stirred solution of hemiacetal 10 (395 mg, 0.21 mmol, 1 equiv.) in anhydrous CH2Cl2 (12 mL) was added Cs2CO3 (83.2 mg, 0.26 mmol, 2 equiv.) and 2,2,2-trifluoro-N-phenyl-acetimidoyl chloride (41 µL, 0.26 mmol, 2 equiv.) at 0 oC with stirring, and then the mixture was warmed up to room temperature and stirred for 3 h. The reaction mixture was diluted with CH2Cl2 (10 mL), filtered through a pad of Celite, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/hexane (1:2) as eluent to give compound 12 as a white foam (150 mg, 56%);
anomeric mixture (a:b = 1:1). Rf = 0.55 (silica gel, acetone:hexane = 1:1); 1H NMR (600 MHz, CDCl3): d 7.93-7.88 (m, 4H, Ar-H), 7.49-7.45 (m, 2H, Ar-H), 7.40-7.12 (m, 38H, Ar- H), 6.75-6.71 (m, 1H, Ar-H), 5.82-5.78 (m, 1H), 5.46-5.42 (m, 1H), 5.36-5.30 (m, 3H), 5.24- 5.16 (m, 1H), 5.08-4.81 (m, 5H, 0.5man-C1-Ha, 2C1-Hb), 4.78-4.74 (m, 1H), 4.69-4.41 (m, 9H, 0.5man-C1-Hb), 4.33-4.06 (m, 7H), 3.95-3.82 (m, 5H), 3.69-3.36 (m, 10H), 2.16-2.10 (m, 9H, -3CH3), 2.01-1.99 (m, 3H, -CH3), 1.92 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.7, 170.7, 170.7, 170.7, 170.4, 170.2, 169.9, 169.9, 165.6, 165.6, 165.4, 165.2, 165.1, 154.1, 153.9, 143.3, 143.1, 138.7, 138.5, 138.3, 138.2, 138.2, 138.1, 138.0, 138.0, 137.8, 137.7, 133.2, 133.1, 133.1, 129.8, 129.6, 129.4, 129.3, 129.0, 128.7, 128.4, 128.4, 128.3, 128.3, 128.3, 128.2, 128.2, 128.1, 128.1, 128.1, 128.0, 127.9, 127.7, 127.7, 127.6, 127.5, 127.5, 127.5, 127.4, 127.3, 119.4, 119.2, 102.3, 100.2, 100.0, 98.3, 98.2, 95.6, 95.5, 88.0, 86.7, 80.0, 79.3, 75.9, 75.0, 74.7, 74.7, 74.5, 74.3, 74.2, 73.8, 73.8, 73.5, 73.3, 73.2, 73.1, 72.8, 72.4, 72.3, 71.5, 71.4, 71.1, 71.0, 70.9, 70.1, 69.8, 69.3, 69.1, 68.2, 67.2, 67.2, 62.8, 62.3, 62.2, 53.3, 53.2, 45.5, 23.3, 21.0, 21.0, 20.7, 20.7, 20.6; 19F NMR (376 MHz, CDCl3): d -65.2, -65.4, -65.5, -65.6, -65.6, -65.7, -215.6, -215.7; HRMS (ESI-TOF) m/e : Calcd for C105H108Cl3F4N3O31Na [M+Na]+: 2110.5860 found 2110.5865.
Figure imgf000022_0001
Benzyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D- erythro-a-L -manno-non-2-ulopyranosonate]-(2®6)-[2,3-di-O-benzoyl-4-O-benzyl-1-b- D-galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-[3,4,6-tri-O-benzyl-a-D- mannopyranosyl]-(1®3)-[2-O-acetyl-4,6-O-benzylidine-b-D-mannopyranosyl]-(1®4)- 3,6-di-O-benzyl-2-deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranoside 14. A mixture AgOTf (194 mg, 0.75 mmol, 6 equiv. with respect to acceptor), bis Cp2HfCl2 (167 mg, 0.44 mmol, 3.5 equiv. with respect to acceptor), and freshly activated 4 Å MS (1.50 g) in anhydrous toluene (15 mL) was stirred at room temperature under argon for 1 h. Then, the reaction mixture was cooled to -20 °C and treated with a solution of donor 11 (290 mg, 0.15 mmol, 1.2 equiv.) and acceptor 13 (115 mg, 0.13 mmol, 1 equiv.) in anhydrous toluene (8 mL). The reaction mixture was stirred at 0 oC until TLC indicated the disappearance of starting material (3 hrs). Upon completion of the reaction, the reaction mixture was quenched with Et3N (0.25 mL), diluted with EtOAc (25 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO3 (10 mL) and brine (6 mL), and the organic phase was dried over MgSO4, filtered, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent to give compound 14 as a white powder (299 mg, 85%).
One-pot Synthesis: A mixture of acceptor 18 (40.0 mg, 0.037 mmol, 1 equiv.), donor 4 (60.1 mg, 0.056 mmol, 1.5 equiv.) and activated pulverized 4 Å MS (0.25 g) in anhydrous CH2Cl2 (1.25 mL) was stirred under argon for 1 h. Then, the reaction mixture was cooled to -40 °C and NIS (12.6 mg, 0.056 mmol, 1.5 equiv.) was added, followed by TfOH (0.5 M in Et2O, 22.3 µL, 0.011 mmol, 0.3 equiv.) and the mixture was then allowed to stir to -20 oC for 2 h. Next, upon disappearance of starting materials (monitored by TLC), the reaction mixture was treated sequentially with acceptor 13 (34.2 mg, 0.037 mmol, 1 equiv.), NIS (16.8 mg, 0.075 mmol, 2 equiv.) and TfOH (0.5 M in Et2O, 22.3 µL, 0.011 mmol, 0.3 equiv.) in anhydrous CH2Cl2 (1.25 mL) with stirring for 10 min under argon. Upon addition of all the reagents, the mixture was allowed to warm up to -10 oC and continued to stir until TLC indicated the disappearance of starting materials (1 h). Upon completion, the reaction was quenched with Et3N (0.4 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (10 mL), washed with 20% aq. Na2S2O3 (3 mL), satd. aq. NaHCO3 (2 mL) and brine (2 mL). The separated organic layer was dried over MgSO4, filtered and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent, followed by a second column chromatography using acetone/hexane (3:4) as eluent to give compound 14 as a white powder (27 mg, 26%). Rf = 0.43 (silica gel, acetone:toluene = 3:5); 1H NMR (600 MHz, CDCl3): d 7.96-7.95 (m, 2H, Ar- H), 7.91-7.90 (m, 2H, Ar-H), 7.51-7.47 (m, 2H, Ar-H), 7.36-7.26 (m, 35H, Ar-H), 7.23-7.10 (m, 19H, Ar-H), 5.84 (dd, J = 10.2, 7.8 Hz, 1H), 5.45-5.42 (m, 1H), 5.34-5.27 (m, 4H), 5.21- 5.15 (m, 2H), 5.04-4.94 (m, 4H, C1-Ha, C1-Hb), 4.87-4.78 (m, 4H), 4.71-4.50 (m, 14H, 2C1- Hb), 4.46-4.34 (m, 5H), 4.31-4.21 (m, 4H), 4.16 (dd, J = 12.6, 5.4 Hz, 1H), 4.13-4.06 (m, 2H), 3.98-3.95 (m, 4H, C1-Hb), 3.84-3.57 (m, 17H), 3.51-3.41 (m, 4H), 3.36-3.35 (m, 2H), 3.15 (br, 1H), 2.93 (br, 1H), 2.68-2.67 (m, 1H), 2.12 (s, 3H, -CH3), 2.11 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 1.99 (s, 3H, -CH3), 1.91 (s, 3H, -CH3), 1.85 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d170.8, 170.7, 170.4, 170.2, 169.7, 169.4, 165.6, 165.4, 165.2, 153.7, 153.6, 138.9, 138.7, 138.4, 138.3, 137.9, 137.1, 133.2, 129.8, 129.7, 129.5, 129.1, 128.9, 128.6, 128.5, 128.4, 128.4, 128.3, 128.3, 128.2, 128.1, 128.1, 128.0, 128.0, 127.9, 127.9, 127.9, 127.8, 127.8, 127.6, 127.6, 127.6, 127.5, 127.4, 127.4, 127.3, 127.2, 126.3, 102.1, 100.1, 99.0, 98.7, 98.6, 95.8, 95.5, 88.2, 86.9, 78.8, 78.4, 74.8, 74.5, 74.3, 74.2, 73.9, 73.8, 73.3, 72.9, 72.3, 71.9, 71.4, 71.1, 70.7, 70.3, 69.2, 69.1, 69.0, 68.4, 68.3, 67.9, 67.2, 66.2, 63.2, 62.3, 57.4, 56.8, 53.3, 45.5, 23.3, 21.0, 20.8, 20.7, 20.6, 20.6; 19F NMR (376 MHz, CDCl3): d -215.6; HRMS (ESI-TOF) m/e : Calcd for C142H150Cl6FN3O43Na2 [M+2Na]2+: 1429.8771 found 1429.8864.
Figure imgf000024_0001
Benzyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D- erythro-a-L- manno-non-2-ulopyranosonate]-(2®6)-[2,3-di-O-benzoyl-4-O-benzyl-1-b- D-galactopyranosyl]-(1®4)-[3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl]-(1®2)-[3,4,6-tri-O-benzyl-a-D- mannopyranosyl]-(1®3)-[2-O-acetyl-b-D-mannopyranosyl]-(1®4)-3,6-di-O-benzyl-2- deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranoside 15. To a stirred solution of starting material 14 (318 mg, 0.11 mmol, 1 equiv.) in acetonitrile (12 mL) was added p-TsOH.H2O (21.5 mg, 0.11 mmol, 1 equiv.). The reaction mixture was vigorously stirred until TLC indicated the disappearance of starting material (6 hrs). Upon completion, the reaction mixture was quenched with Et3N (0.3 mL) and concentrated under high vacuum. The obtained residue was purified by silica gel column chromatography using
acetone/toluene (3:5) as eluent to give compound 15 as a white powder (231 mg, 75%). Rf = 0.25 (silica gel, acetone:toluene = 1:2); 1H NMR (600 MHz, CDCl3): d 7.88-7.87 (m, 4H, Ar- H), 7.46 (dd, J = 7.2, 7.2 Hz, 1H, Ar-H), 7.43 (dd, J = 7.2, 7.2 Hz, 1H, Ar-H), 7.33-7.13 (m, 47H, Ar-H), 7.09-7.08 (m, 2H, Ar-H), 6.01 (br, 1H), 5.76 (dd, J = 10.2, 7.8 Hz, 1H), 5.46- 5.43 (m, 1H), 5.38 (d, J = 8.4 Hz, 1H), 5.31-5.29 (m, 3H), 5.19-5.13 (m, 2H, C1-Ha), 5.05- 4.96 (m, 3H, C1-Hb), 4.89-4.79 (m, 4H, C1-Hb), 4.69-4.60 (m, 8H, C1-Hb), 4.57-4.49 (m, 8H, C1-Hb), 4.45 (d, J = 12.0 Hz, 1H), 4.40-4.36 (m, 2H), 4.31 (dd, J = 12.6, 2.4 Hz, 1H), 4.24- 4.16 (m, 4H), 4.12-4.09 (m, 2H), 4.02 (br, 1H), 3.98-3.93 (m, 2H), 3.91-3.86 (m, 2H), 3.80 (dd, J = 7.8, 6.0 Hz, 1H), 3.76-3.69 (m, 6H), 3.66-3.37 (m, 18H), 2.96-2.93 (m, 1H), 2.13 (s, 3H, -CH3), 2.11 (s, 3H, -CH3), 2.09 (s, 3H, -CH3), 1.98 (s, 3H, -CH3), 1.93 (s, 3H, -CH3), 1.90 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.8, 170.7, 170.4, 170.3, 170.2, 169.8, 165.6, 165.5, 165.3, 154.3, 153.8, 138.6, 138.4, 138.3, 138.1, 138.0, 137.8, 137.2, 133.3, 133.1, 129.8, 129.6, 129.4, 129.0, 128.5, 128.4, 128.3, 128.2, 128.2, 127.9, 127.9, 127.8, 127.7, 127.6, 127.5, 127.5, 127.4, 127.4, 127.3, 100.1, 99.1, 98.3, 98.2, 98.1, 95.7, 95.5, 88.2, 86.9, 78.6, 78.2, 75.4, 75.1, 74.8, 74.7, 74.4, 74.2, 74.1, 73.8, 73.3, 73.2, 72.6, 71.9, 71.8, 71.5, 71.4, 70.9, 70.6, 69.5, 62.3, 57.2, 56.8, 53.8, 53.3, 45.4, 23.3, 21.1, 21.0, 20.7 (2C), 20.7; 19F NMR (376 MHz, CDCl3): d -215.6; HRMS (ESI-TOF) m/e : Calcd for
C135H146Cl6FN3O43Na [M+Na]+: 2748.7337 found 2748.7373.
Figure imgf000025_0001
Benzyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro-D- erythro-a-L -manno-non-2-ulopyranosonate-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-1-b-D- galactopyranosyl-(1®4)-3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl-(1®2)-3,4,6-tri-O-benzyl-a-D- mannopyranosyl-(1®3)]-[methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3- fluoro-D-erythro-a-L-manno-non-2-ulopyranosonate-(2®6)-2,3-di-O-benzoyl-4-O- benzyl-1-b-D-galactopyranosyl-(1®4)-3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranosyl-(1®2)-3,4,6-tri-O-benzyl-a-D- mannopyranosyl-(1®6)]-[2-O-acetyl-b-D-mannopyranosyl]-(1®4)-3,6-di-O-benzyl-2- deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranoside 16. From fluoride donor: A mixture of AgOTf (142 mg, 0.55 mmol, 8 equiv. with respect to acceptor), Cp2HfCl2 (105 mg, 0.28 mmol, 4 equiv. with respect to acceptor), and freshly activated 4 Å MS (1 g) in anhydrous toluene (10 mL) was stirred at room temperature under argon atmosphere for 1 h. Then, the reaction mixture was cooled to -40 °C and a solution of donor 11 (232 mg, 0.12 mmol, 1.75 equiv.) and acceptor 15 (188 mg, 0.069 mmol, 1 equiv.) in anhydrous toluene (1 mL) was added. Stirring was continued at -15 oC for 3 h. The reaction mixture was quenched with Et3N (0.20 mL), diluted with EtOAc (20 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO3 (8 mL) and brine (4 mL). The organic phase was dried over MgSO4, filtered and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using acetone/toluene (2:3) as eluent to give compound 16 as a white powder (223 mg, 70%) along with the recovered 15 (23.0 mg, 80% brsm).
From trifluoroacetimidate donor: A mixture of acceptor 15 (32.0 mg, 0.012 mmol, 1 equiv.), donor 12 (42.9 mg, 0.021 mmol, 1.75 equiv.) and activated pulverized 4 Å MS (200 mg) in anhydrous CH2Cl2 (2 mL) was stirred under argon for 30 min. Then, the reaction mixture was cooled to -60 °C and treated with TfOH (0.5 M in Et2O, 5.86 µL, 2.93 mmol, 0.25 equiv. with respect to acceptor). After stirring at -20 oC for 3 h. the reaction mixture was quenched with Et3N (0.10 mL), diluted with CH2Cl2 (10 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO3 (4 mL) and brine (3 mL). The organic phase was dried over MgSO4, filtered, and concentrated. The obtained residue was purified by silica gel column chromatography using acetone/toluene (2:3) as eluent to give compound 16 as a white powder (18.0 mg, 33%) along with the recovered acceptor (12.6 mg, 55% brsm). Rf = 0.17 (silica gel, acetone:toluene = 1:2); 1H NMR (600 MHz, CDCl3): d 7.91-7.86 (m, 8H, Ar-H), 7.48-7.42 (m, 4H, Ar-H), 7.33-7.11 (m, 83H, Ar-H), 5.81-5.75 (m, 2H), 5.43-5.38 (m, 3H), 5.31-5.07 (m, 11H, 2C1-Ha), 5.03-4.78 (m, 9H, 2C1-Hb), 4.75-4.08 (m, 48H, 4C1-Hb), 4.05-3.89 (m, 7H), 3.87-2.99 (m, 40H), 2.13-2.12 (m, 6H, -2CH3), 2.10- 2.07 (m, 15H, -5CH3), 1.99-1.97 (s, 6H, -2CH3), 1.90-1.88 (m, 6H, -2CH3); 13C NMR (150 MHz, CDCl3): d 170.7, 170.6, 170.6, 170.4, 170.2, 169.8, 169.7, 169.6, 165.6, 165.5, 165.4, 165.4, 165.1, 154.0, 153.6, 139.1, 138.8, 138.4, 138.3, 138.1, 138.0, 137.7, 133.2, 133.1, 129.8, 129.8, 129.7, 129.6, 129.6, 129.5, 129.5, 129.1, 129.1, 128.4, 128.4, 128.3, 128.2, 128.2, 128.0, 128.0, 127.8, 127.8, 127.8, 127.7, 127.7, 127.5, 127.4, 127.4, 127.3, 127.2, 127.1, 100.1, 99.8, 98.8, 98.4, 98.2, 95.7, 88.1, 86.8, 78.3, 77.8, 75.3, 74.7, 74.5, 74.4, 74.3, 74.2, 74.0, 73.9, 73.4, 73.3, 73.3, 73.2, 73.1, 73.0, 72.9, 72.5, 72.4, 72.0, 71.9, 71.5, 71.0, 71.0, 70.9, 70.9, 70.7, 69.5, 69.4, 69.2, 69.1, 69.0, 69.0, 68.5, 68.1, 68.1, 68.0, 67.2, 62.9, 62.2, 57.5, 57.2, 53.8, 53.2, 53.2, 45.5, 45.3, 23.3, 21.0, 21.0, 20.8, 20.7, 20.7, 20.6; 19F NMR (376 MHz, CDCl3): d -215.6 (2F); HRMS (ESI-TOF) m/e : Calcd for C232H255Cl9F2N6O74 [M+H3O+NH4]2+: 2330.6770 found 2330.6724.
Figure imgf000027_0001
[5-Acetamido-3,5-dideoxy-3-fluoro-D-erythro-a-L-manno-non-2- ulopyranosonate-(2®6)-b-D-galactopyranosyl-(1®4)-2-acetamido-2-deoxy-b-D- glucopyranosyl-(1®2)-a-D-mannopyranosyl-(1®3)]-[5-acetamido-3,5-dideoxy-3-fluoro- D-erythro-a-L-manno-non-2-ulopyranosonate-(2®6)-b-D-galactopyranosyl-(1®4)-2- acetamido-2-deoxy-b-D-glucopyranosyl-(1®2)-a-D-mannopyranosyl-(1®6)]-[b-D- mannopyranosyl]-(1®4)-2-acetamido-2-deoxy-D-glucopyranoside 17. A solution of protected glycan 16 (103 mg, 0.022 mmol, 1 equiv.) and LiOH (51.5 mg, 50% by S.M. wt) in a mixture of 1,4-dioxane/H2O (3 mL, 4:1 = v/v) was stirred at 90 oC for 16 h. The reaction mixture was concentrated under high vacuum and subjected to the acetylation conditions (pyridine (2.5 mL), Ac2O (1.5 mL), r.t., 16 h). After the solvent was removed, the crude residue was purified by LiChroprep® RP-18 reverse-phase column chromatography using H2O/MeOH (1:5) as eluent. The product was deacetylated by stirring with NaOMe in MeOH (3 mL, 0.5 M) for 16 h. The reaction mixture was neutralized with IR-120, filtered, and concentrated in vacuo. The residue was purified by LiChroprep® RP-18 reverse-phase column chromatography using H2O/MeOH (1:4) as eluent. The crude product of deacetylation was dissolved in a mixture of MeOH/H2O/HCOOH (3 mL, 6:3:1 = v/v/v) and treated with Pd(OH)2 (51.5 mg, 50% by S.M. wt) for 20 h. The reaction mixture was filtered through a pad of Celite and concentrated in vacuo. The residue was purified by (BIO-RAD) Biogel P-2 column chromatography (eluted with water), followed by purification with LiChroprep® RP-18 reverse-phase column chromatography (eluted with water) to give compound 17 as a white powder (18.3 mg, 40%) of anomeric mixture (a:b = 0.65:0.35). 1H NMR (600 MHz, D2O): d 5.23 (d, J = 3.0 Hz, 0.65H, a-C1-Ha), 5.14 (d, J = 52.8 Hz, 2H, sia- C3-H), 5.14 (br, 1H, c-C1-Ha), 4.96 (br, 1H, c’-C1-Ha), 4.79 (br, 1H, b-C1-Hb), 4.73 (br, 0.35H, a-C1-Hb), 4.60 (d, J = 7.8 Hz, 2H, dd’-C1-Hb), 4.48 (d, J = 7.8 Hz, 2H, ee’-C1-Hb), 4.28-4.21 (m, 4H), 4.13 (br, 1H), 4.00-3.51 (m, 57H), 2.09-2.08 (m, 9H, -3CH3), 2.05 (br, 6H, -2CH3); 13C NMR (150 MHz, D2O): d 174.5, 174.2, 174.1, 102.7, 102.6, 100.0, 99.1, 98.9, 98.9, 98.7, 98.6, 96.6, 94.4, 91.0, 90.0, 89.8, 80.0, 79.7, 79.3, 78.9, 76.0, 75.8, 74.1, 74.0, 73.9, 73.1, 72.9, 72.7, 72.4, 71.9, 71.9, 71.6, 71.5, 71.1, 70.3, 69.8, 69.4, 69.2, 69.1, 69.0, 68.7, 68.0, 67.8, 66.9, 66.8, 65.4, 65.2, 63.6, 62.2, 61.2, 61.2, 59.7, 59.6, 55.6, 54.4, 53.1, 46.3, 21.9, 21.6; 19F NMR (376 MHz, D2O): d -217.4, -217.4; HRMS (ESI-TOF) m/e : Calcd for C76H121F2N5O57 [M-2H]-2: 1026.8351 found 1026.8299.
Figure imgf000028_0001
[5-Acetamido-3,5-dideoxy-3-fluoro-D-erythro-a-L-manno-non-2- ulopyranosonate-(2®6)-b-D-galactopyranosyl-(1®4)-2-acetamido-2-deoxy-b-D- glucopyranosyl-(1®2)-a-D-mannopyranosyl-(1®3)]-[5-acetamido-3,5-dideoxy-3-fluoro- D-erythro-a-L-manno-non-2-ulopyranosonate-(2®6)-b-D-galactopyranosyl-(1®4)-2- acetamido-2-deoxy-b-D-glucopyranosyl-(1®2)-a-D-mannopyranosyl-(1®6)]-[b-D- mannopyranosyl]-(1®4)-(2-acetamido-1,2-dideoxy-D-glucopyrano)-[2,1-d]-2- methyloxazoline S1. Representative synthesis of glycan oxazoline. A solution of glycan 17 (14.5 mg, 7.05 µmol, 1 equiv.), 2-Chloro-1,3-dimethyl-1H-benzimidazol-3-ium chloride (CDMBI) (12.2 mg, 0.056 mmol, 8 equiv.) and Et3N (19.9 mL) in water (121.1 mL) was stirred at 4 oC for 1 h. The reaction mixture was subjected to gel filtration chromatography on a Sephadex G-25 column and eluted with 0.05% aq. Et3N. The fractions containing the glycan oxazoline product were combined and lyophilized to give the desired product S1 as a white powder (12.6 mg, yield 87%). 1H NMR (600 MHz, D2O + 0.05% Et3N): d 6.09 (d, J = 7.2 Hz, 1H, oxa-C1-Ha), 5.12 (d, J = 52.2 Hz, 2H, sia-C3-H), 5.11 (br, 1H, c-C1-Ha), 4.95 (br, 1H, c’-C1-Ha), 4.74 (br, 1H, b-C1-Hb), 4.60-4.57 (m, 2H, dd’-C1-Hb), 4.46-4.45 (m, 2H, ee’-C1-Hb), 4.39 (br, 1H), 4.22-4.15 (m, 5H), 3.98-3.49 (m, 55H), 3.43-3.40 (m, 1H), 2.07- 2.02 (m, 15H, -5CH3); 13C NMR (150 MHz, D2O + 0.05% Et3N): d 174.9, 174.7, 174.7, 170.7, 170.7, 168.5, 103.1, 103.1, 101.4, 99.9, 99.5, 99.4, 99.2, 99.1, 99.0, 96.5, 91.4, 90.2, 80.4, 79.4, 77.9, 76.4, 76.0, 74.6, 74.2, 73.4, 73.4, 72.8, 72.4, 72.3, 72.0, 71.9, 71.5, 70.8, 70.7, 70.2, 69.6, 69.5, 69.4, 69.1, 68.5, 68.2, 67.2, 65.8, 65.7, 65.1, 64.1, 62.6, 61.6, 61.6, 60.1, 54.9, 46.7, 22.4, 22.0, 12.9; 19F NMR (470 MHz, D2O + 0.05% Et3N): d -217.3 (d, JFH = 51.3 Hz), -217.3 (d, JFH = 51.3 Hz); HRMS (ESI-TOF) m/e : Calcd for C76H120F2N5O56 [M- H]-: 2036.6658 found 2036.6672.
Figure imgf000029_0001
Reagents and conditions in Scheme S1: (a) TFA, MeOH, 60 oC, 16 h, then AcCl, r.t., 2 d, then Na2HPO4, CH3CN, reflux, 20 h, 92 %. (b) ref.3, 80 % (three steps). (c) TiBr4, dichloroethane, r.t., 10 min., 92 %. (d) BH3, Cu(OTf)2, THF, r.t., 8 h, 96%.
Figure imgf000029_0002
Methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-2,6-anhydro-D-glycero-D- galacto -non-2-enonate S3.19 To a stirred solution of compound S2 (20 g, 64.7 mmol, 1 equiv.) in MeOH (600 mL) was added TfOH (4.95 mL, 64.7 mmol, 1 equiv.). The reaction mixture was allowed to stir at 60 oC for 16 h. The solvent was removed by rotary
evaporation under reduced pressure and co-evaporated with toluene twice to remove traces of water. The obtained residue was dissolved in AcCl (200 mL)at 0 oC in a round bottom flask, sealed and stirred to room temperature for 2 days. Upon removal of solvent, the obtained residue was diluted with anhydrous acetonitrile (200 mL) and then Na2HPO4 (19.6 g, 155 mmol, 2.4 equiv.) was added under argon. The reaction mixture was vigorously stirred at 90 oC until TLC indicated the disappearance of starting material (16 hrs). The solution was filtered through a pad of Celite, dried over MgSO4, and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/hexane (4:1) as eluent to give compound S3 as a brown foam (28.2 g, 92%). Spectroscopic data was agreed with reported in the literature previously.19 Rf = 0.30 (silica gel, EtOAc); 1H NMR (600 MHz, CDCl3): d 5.95 (d, J = 3.0 Hz, 1H), 5.81 (d, J = 9.0 Hz, 1H), 5.47-5.44 (m, 2H), 5.32-5.30 (m, 1H), 4.59 (dd, J = 12.0, 3.0 Hz, 1H), 4.38-4.33 (m, 2H), 4.15 (d, J = 12.0, 7.2 Hz, 1H), 3.76 (s, 3H, -CH3), 2.08 (s, 3H, -CH3), 2.03 (s, 3H, -CH3), 2.02 (s, 3H, -CH3), 2.01 (s, 3H, -CH3), 1.88 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.7, 170.5, 170.1, 170.1, 170.0, 161.6, 145.0, 107.9, 70.6, 67.8, 67.6, 61.9, 52.5, 46.5, 23.1, 20.8, 20.7, 20.7; HRMS (ESI-TOF) m/e : Calcd for C20H27NO12Na [M+Na]+: 496.1425 found 496.1435.
Figure imgf000030_0001
Methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-2-bromo-2,5-dideoxy-D-erythro-a-L- gluco-non -2-ulopyranosonate 3.20 The synthesis of the epoxide S4 was performed from sialic acid using reported procedures.21 To a stirred solution of epoxide compound S4 (1.10 g, 2.25 mmol, 1 equiv.) in anhydrous 1,2-dichloroethane (18 mL), was added TiBr4 (0.91 g, 2.47 mmol, 1.1 equiv.) under argon for 10 min. The solvent was removed by rotary evaporation under high vacuum. The obtained residue was diluted with EtOAc (30 mL), washed with saturated aq. Na2SO4 (10 mL), 5% aq. NaHCO3 (10 mL), and then brine (5 mL). The separated organic layer was dried over MgSO4, and concentrated in vacuo and the obtained residue was purified by silica gel column chromatography using acetone/hexane (2:1) as eluent to give compound 3 as a white powder (1.18 g, 92%). Spectroscopic data and protocol were identical to that reported previously.20 Rf = 0.23 (silica gel, acetone:toluene = 1:1); 1H NMR (600 MHz, CDCl3): d 5.99 (d, J = 7.2 Hz, 1H), 5.42 (dd, J = 7.2, 1.2 Hz, 1H), 5.21-5.18 (m, 1H), 5.10 (ddd, J = 6.0, 6.0, 2.4 Hz, 1H), 4.38 (dd, J = 12.6, 2.4 Hz, 1H), 4.32- 4.30 (m, 2H), 3.99 (dd, J = 12.6, 6.0 Hz, 1H), 3.86 (s, 3H, -CH3), 3.78 (d, J = 9.0 Hz, 1H), 3.66 (br, 1H, -OH), 2.07 (s, 3H, -CH3), 2.06 (s, 3H, -CH3), 2.05 (s, 3H, -CH3), 2.01 (s, 3H, - CH3), 1.84 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.4, 170.6, 170.3, 169.8, 169.7, 167.0, 98.0, 75.0, 72.8, 72.2, 69.9, 66.5, 61.9, 54.0, 47.2, 22.9, 21.0, 20.7, 20.6; HRMS (ESI- TOF) m/e : Calcd for C20H29BrNO13 [M+H]+: 570.0817 found 570.0822.
Figure imgf000031_0001
p-Tolyl 2,3-di-O-benzoyl-4-O-benzyl-1-thio-b-D-galactopyranoside 5.22 To a stirred solution of starting material S523 (4.00 g, 6.86 mmol, 1 equiv.) in BH3-THF complex (1 M in THF, 34.3 mL, 34.3 mmol, 5 equiv.) was added Cu(OTf)2 (124 mg, 0.34 mmol, 0.05 equiv.) and the reaction mixture was stirred at room temperature for 8 h. Upon completion, the reaction was carefully neutralized with TEA (0.96 mL, 6.86 mmol, 1 equiv.) at 0 oC, then diluted with MeOH (15 mL). After removal of solvent in vacuo, the obtained residue was purified by silica gel column chromatography using EtOAc/hexane (1:2) as an eluent to give compound 5 as a white powder (3.85 g, 96%). Spectroscopic data agreed with those reported in the literature previously.22 Rf = 0.45 (silica gel, EtOAc:hexane = 1:1); 1H NMR (600 MHz, CDCl3): d 7.97-7.94 (m, 4H, Ar-H), 7.51-7.48 (m, 2H, Ar-H), 7.38-7.34 (m, 6H, Ar- H), 7.27-7.21 (m, 5H, Ar-H), 5.85 (dd, J = 10.2, 10.2 Hz, 1H), 5.36 (dd, J = 9.6, 3.0 Hz, 1H), 4.87 (d, J = 9.6 Hz, 1H, C1-Hb), 4.74 (d, J = 12.0 Hz, 1H), 4.47 (d, J = 12.0 Hz, 1H), 4.16 (d, J = 2.4 Hz, 1H), 3.91 (d, J = 11.4, 7.2 Hz, 1H), 3.76 (dd, J = 6.0, 6.0 Hz, 1H), 3.61 (dd, J = 11.4, 5.4 Hz, 1H), 2.30 (s, 3H, -CH3), 1.83 (br, 1H); 13C NMR (150 MHz, CDCl3): d 165.9, 165.2, 138.1, 137.4, 133.4, 133.1, 133.0, 129.8, 129.7, 129.6, 129.5, 128.9, 128.7, 128.5, 128.4, 128.3, 128.1, 127.9, 86.8, 79.0, 76.0, 74.6, 73.7, 68.5, 61.9, 21.1; HRMS (ESI-TOF) m/e : Calcd for C34H32O7SNa [M+Na]+: 607.1761 found 607.1770.
Figure imgf000031_0002
Reagents and conditions in Scheme S2: (a) TESOTf, BnCHO, TESH, toluene, THF, 2 h, -20 oC, 90%. (b) NIS, TfOH, 4Å MS, -40 oC, 1.5 h, CH2Cl2, 75%. (c) NaBH3CN, HCl/ether, AW-300, THF, 0 oC to r.t., 16 h, 85%.
Figure imgf000031_0003
p-Tolyl 3-O-benzyl-4,6-O-benzylidene-2-deoxy-1-thio-2-(2,2,2-trichloroethoxy) carbamoylamino-b-D-glucopyranoside S7. To a stirred solution of starting material S624 (5.17 g, 9.42 mmol, 1 equiv.) in a mixture of THF/toluene (45 mL, 1:2 = v/v) was added TESOTf (4.26 mL, 18.8 mmol, 2 equiv.) at -20 oC under argon. After stirring for 45 min at - 20 oC, benzaldehyde (4.79 mL, 47.1 mmol, 5 equiv.) and triethylsilane (2.26 mL, 14.1 mmol, 1.5 equiv.) were added dropwise to the mixture with stirring. After 2 h at -20 oC, TLC indicated the disappearance of starting material and the reaction was quenched with satd. aq. Na2CO3, diluted with EtOAc (100 mL) and washed with satd. aq. Na2CO3 (30 mL), and brine. The combined organic layers were dried over MgSO4, filtered and concentrated in vacuo. The resulting residue was purified by silica gel column chromatography first using CH2Cl2/toluene (1:4) then EtOAc/toluene (1:10) as eluent to give compound S7 as a white solid (5.40 g, 90%). Rf = 0.50 (silica gel, EtOAc:toluene = 1:25); 1H NMR (600 MHz, Acetone-d6): d 7.52-7.50 (m, 2H, Ar-H), 7.42-7.36 (m, 4H, Ar-H), 7.32-7.31 (m, 2H, Ar-H), 7.29-7.22 (m, 4H, Ar-H), 7.18-7.15 (m, 2H, Ar-H), 5.72 (s, 1H, Ph-CH), 5.03 (d, J = 10.8 Hz, 1H, C1-Hb), 4.90-4.82 (m, 3H), 4.74 (d, J = 12.0 Hz, 1H), 4.30 (dd, J = 10.2, 5.4 Hz, 1H), 3.95 (dd, J = 9.6, 9.0 Hz, 1H), 3.84-3.71 (m, 3H), 3.56 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.83 (s, 2H), 2.32 (s, 3H, -CH3); 13C NMR (150 MHz, Acetone-d6): d 155.3, 139.8, 139.4, 138.6, 133.3, 130.7, 130.5, 129.8, 129.6, 129.1, 129.0, 129.0, 128.5, 128.2, 127.1, 101.8, 97.1, 88.6, 82.7, 80.8, 75.0, 75.0, 71.2, 69.1, 57.4, 21.1; HRMS (ESI-TOF) m/e : Calcd for
C30H30Cl3NO6SNa [M+Na]+: 660.0752 found 660.0749.
Figure imgf000032_0001
Allyl [3-O-benzyl-4,6-O-benzylidene-2-deoxy-2-(2,2,2-trichloroethoxy) carbonylamino-b-D-glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-a-D-mannopyranoside S9. A mixture of acceptor S825 (523 mg, 0.94 mmol, 1 equiv.), donor S7 (900 mg, 1.41 mmol, 1.5 equiv.) and activated pulverized 4 Å MS (2.00 g) in anhydrous CH2Cl2 (20 mL) was stirred under argon for 1 h. Then, the reaction mixture was cooled to -40 °C and treated with NIS (423 mg, 1.88 mmol, 2 equiv.) and TfOH (0.5 M in Et2O, 0.47 mL, 0.23 mmol, 0.25 equiv.). After stirring at that temperature for 1.5 h, the TLC analysis indicated disappearance of starting materials and the reaction mixture was quenched with Et3N (0.2 mL), and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (20 mL), washed with 20% aq. Na2S2O3 (5 mL), satd. aq. NaHCO3 (10 mL) and brine (5 mL). The separated organic layer was dried over MgSO4 and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:10) as eluent to give compound S9 as a white foam (710 mg, 75%). Rf = 0.36 (silica gel,
EtOAc:toluene = 1:10); 1H NMR (600 MHz, CDCl3): d 7.50-7.48 (m, 2H, Ar-H), 7.39-7.36 (m, 6H, Ar-H), 7.33-7.25 (m, 15H, Ar-H), 7.23-7.22 (m, 2H, Ar-H), 5.84 (ddd, J = 16.2.10.8, 5.4 Hz, 1H), 5.55 (s, 1H, Ph-CH), 5.26 (d, J = 1.2 Hz, 1H), 5.23-5.20 (m, 1H), 5.16 (dd, J = 10.8, 1.2 Hz, 1H), 5.01 (d, J = 7.8 Hz, 1H, C1-Hb), 4.90 (d, J = 10.8 Hz, 1H), 4.83 (d, J = 11.4 Hz, 1H), 4.75-4.62 (m, 6H, C1-Ha), 4.55-4.51 (m, 3H), 4.33-4.29 (m, 2H), 4.13-4.10 (m, 1H), 4.08 (dd, J = 2.4, 2.4 Hz, 1H), 4.00-3.97 (m, 1H), 3.94 (dd, J = 9.6, 3.0 Hz, 1H), 3.89 (dd, J = 13.2, 6.0 Hz, 1H), 3.82-3.78 (m, 2H), 3.72-3.66 (m, 3H), 3.50-3.46 (m, 1H), 3.12 (d, J = 6.0 Hz, 1H); 13C NMR (150 MHz, CDCl3): d 153.8, 138.6, 138.5, 138.3, 138.1, 137.3, 133.7, 129.0, 128.4, 128.3, 128.2, 128.1, 128.0, 127.8, 127.6, 127.6, 127.4, 126.0, 117.2, 101.2, 98.9, 96.9, 95.5, 82.4, 78.5, 75.6, 75.2, 74.6, 74.4, 74.2, 73.3, 72.2, 72.2, 69.2, 68.6, 68.0, 66.1, 58.1; HRMS (ESI-TOF) m/e : Calcd for C53H56Cl3NO12Na [M+Na]+: 1026.2760 found 1026.2780.
Figure imgf000033_0001
Allyl [3,6-di-O-benzyl-2-deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D- glucopyranosyl] -(1®2)-3,4,6-tri-O-benzyl-a-D-mannopyranoside 8.27 To a stirred solution of starting material S9 (500 mg, 0.50 mmol, 1 equiv.) in anhydrous THF (12 mL) was added activated pulverized AW 300 MS (1.20 g) under argon. Then, the reaction mixture was cooled to 0 °C and NaCNBH3 (313 mg, 4.97 mmol, 10 equiv.) was added, followed by a slow addition of HCl•Et2O (2 M in Et2O, 2.24 mL, 4.48 mmol, 9 equiv.), and the mixture was continued to stir until TLC indicated the disappearance of starting materials (16 hrs). Upon completion, the reaction mixture was quenched with satd. aq. NaHCO3 (0.5 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (20 mL) then washed with satd. aq. NaHCO3 (8 mL) and brine (5 mL). The separated organic layer was dried over MgSO4 and concentrated. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:5) as an eluent to give compound 8 as a white foam (425 mg, 85%). The spectroscopic data were consistent with those reported in the literature.27 Rf = 0.17 (silica gel, EtOAc:toluene = 1:10); 1H NMR (600 MHz, CDCl3): d 7.36-7.23 (m, 23H, Ar-H), 7.20-7.19 (m, 2H, Ar-H), 5.84 (ddd, J = 16.2.10.2, 6.0 Hz, 1H), 5.35 (br, 1H), 5.21 (dd, J = 16.2, 1.2 Hz, 1H), 5.14 (dd, J = 10.2, 1.2 Hz, 1H), 4.95 (d, J = 7.2 Hz, 1H, C1-Hb), 4.88 (d, J = 10.8 Hz, 1H), 4.78 (d, J = 1.8 Hz, 1H, C1-Ha), 4.75 (d, J = 11.4 Hz, 1H), 4.70-4.63 (m, 5H), 4.60 (d, J = 11.4 Hz, 1H), 4.55-4.49 (m, 4H), 4.14-4.07 (m, 3H), 3.96-3.87 (m, 3H), 3.77 (dd, J = 10.8, 4.2 Hz, 1H), 3.73-3.70 (m, 3H), 3.66 (dd, J = 10.8, 1.8 Hz, 1H), 3.61 (dd, J = 9.6, 8.4 Hz, 1H), 3.54-3.51 (m, 1H), 3.08 (m, 1H), 2.71 (m, 1H, -OH); 13C NMR (150 MHz, CDCl3): d 154.0, 138.5, 138.5, 138.4, 138.1, 137.6, 133.7, 128.5, 128.5, 128.3, 128.3, 128.3, 128.2, 128.0, 128.0, 127.8, 127.7, 127.7, 127.6, 127.6, 127.5, 117.3, 79.2, 78.2, 75.1, 74.6, 74.3, 74.2, 73.8, 73.7, 73.4, 73.3, 72.0, 71.7, 70.9, 69.3, 68.0, 57.5; HRMS (ESI-TOF) m/e : Calcd for C53H58Cl3NO12Na [M+Na]+: 1028.2917 found 1028.2927.
Figure imgf000034_0001
Reagents and conditions in Scheme S3: (a) NaBH3CN, HCl/ether, AW-300, THF, 0 oC to r.t., 16 h, 90%. (b) Ac2O, pyridine, r.t., 16 h, 98%. (c) NIS, TfOH, HOPO(OBu)2, 4Å MS, -30 oC, 2 h, CH2Cl2, 90%. (d) TMSOTf, 4Å MS, -50 oC, 1 h, CH2Cl2, 87%. (e) NaOMe,
MeOH/CH2Cl2, 0 oC to r.t., 76%.
Figure imgf000034_0002
p-Tolyl 3,6-di-O-benzyl-2-deoxy-1-thio-2-(2,2,2- trichloroethoxy)carbamoylamino-b-D- glucopyranoside S10.28 To a stirred solution of starting material S7 (1.00 g, 1.56 mmol, 1 equiv.) in anhydrous THF (30 mL) was added activated pulverized AW 300 MS (3.00 g) under argon. Then, the reaction mixture was cooled to 0 °C and NaCNBH3 (0.98 g, 15.6 mmol, 10 equiv.) was added, followed by a slow addition of HCl•Et2O (2 M in Et2O, 7.04 mL, 14.1 mmol, 9 equiv.), and the mixture was stirred until TLC indicated the disappearance of starting materials (16 h). Upon completion, the reaction mixture was quenched with satd. aq. NaHCO3 (0.5 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (50 mL) then washed with satd. aq. NaHCO3 (15 mL) and brine (10 mL). The separated organic layer was dried over MgSO4 and concentrated. The obtained residue was purified by silica gel column chromatography using EtOAc/hexane/CH2Cl2 (1:3:1) as eluent to give compound S10 as a white foam (902 mg, 90%). The spectroscopic data were consistent with those reported in the literature.28 Rf = 0.29 (silica gel, EtOAc:hexane = 1:3); 1H NMR (600 MHz, CDCl3): d 7.40-7.38 (m, 2H, Ar-H), 7.36-7.27 (m, 10H, Ar-H), 7.04-7.03 (m, 2H, Ar-H), 5.20 (d, J = 7.8 Hz, 1H), 4.84 (d, J = 10.2 Hz, 1H, C1-Hb), 4.77-4.72 (m, 4H), 4.58-4.52 (m, 2H), 3.76 (d, J = 4.8 Hz, 2H), 3.71-3.64 (m, 2H), 3.50-3.49 (m, 1H), 3.42-3.38 (m, 1H), 2.90 (br, 1H, -OH), 2.29 (s, 3H, - CH3); 13C NMR (150 MHz, CDCl3): d 153.8, 138.1, 138.1, 137.7, 133.0, 129.6, 128.6, 128.5, 128.4, 128.1, 127.9, 127.8, 127.7, 95.5, 86.1, 81.9, 78.0, 74.5, 74.4, 73.6, 72.5, 70.4, 55.9, 21.1; HRMS (ESI-TOF) m/e : Calcd for C30H32Cl3NO6SNa [M+Na]+: 662.0908 found 662.0919.
Figure imgf000035_0001
p-Tolyl 4-O-acetyl-3,6-di-O-benzyl-2-deoxy-1-thio-2-(2,2,2- trichloroethoxy)carbamoylamino-b-D-glucopyranoside S11. To a stirring solution of starting material S10 (0.97 g, 1.51 mmol, 1 equiv.) in pyridine (12 mL) was added Ac2O (6 mL). The reaction mixture was vigorously stirred for 16 h at room temperature, then concentrated in vacuo and purified by silica gel column chromatography using
EtOAc/hexane/CH2Cl2 (1:4:1) as eluent to give compound S11 as a white powder (1.01 g, 98%). Rf = 0.47 (silica gel, EtOAc:hexane = 1:3); 1H NMR (600 MHz, CDCl3): d 7.41-7.40 (m, 2H, Ar-H), 7.34-7.25 (m, 8H, Ar-H), 7.22-7.21 (m, 2H, Ar-H), 7.03-7.01 (m, 2H, Ar-H), 5.29 (d, J = 7.2 Hz, 1H), 5.04 (d, J = 10.2 Hz, 1H, C1-Hb), 4.98 (dd, J = 9.6, 9.6 Hz, 1H), 4.78 (d, J = 12.0 Hz, 1H), 4.70 (d, J = 12.0 Hz, 1H), 4.62 (d, J = 11.4 Hz, 1H), 4.57 (d, J = 11.4 Hz, 1H), 4.50 (br, 2H), 4.05 (dd, J = 9.6, 9.0 Hz, 1H), 3.65-3.63 (m, 1H), 3.59-3.55 (m, 2H), 3.33 (ddd, J = 9.6, 9.6, 9.6 Hz, 1H), 2.29 (s, 3H, -CH3), 1.87 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 169.8, 153.7, 138.4, 138.0, 137.7, 133.3, 129.8, 128.6, 128.5, 128.4, 128.2, 128.1, 128.1, 127.9, 127.9, 127.7, 95.5, 85.3, 79.4, 77.7, 74.4, 73.6, 71.4, 69.7, 56.5, 21.1, 20.9; HRMS (ESI-TOF) m/e : Calcd for C32H34Cl3NO7SNa [M+Na]+: 704.1014 found 104.1031.
Figure imgf000035_0002
Dibutyl 4-O-acetyl-3,6-di-O-benzyl-2-deoxy-1-thio-2-(2,2,2-trichloroethoxy) carbamoylamino-a orb-D-glucopyranoside phosphate S12a, b. A mixture of compound S11 (990 mg, 1.45 mmol, 1 eq.), dibutyl phosphate (1.15 mL, 5.80 mmol, 3 eq.) and activated pulverized 4 Å MS (1.80 g) in anhydrous CH2Cl2 (18 mL) was stirred under argon for 1 h. Then it was cooled to -30 °C with stirring, and NIS (978 mg, 4.35 mmol, 2 eq.) was added followed by TfOH (0.5 M in Et2O, 0.87 mL, 0.43 mmol, 0.3 eq.). After 2h, the TLC analysis indicated disappearance of starting materials and the reaction mixture was quenched by satd. aq. NaHCO3 (0.5 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (50 mL), washed with 20% aq. Na2S2O3 (10 mL), satd. aq. NaHCO3 (5 mL) and brine (5 mL). The separated organic layer was dried over MgSO4 and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:3) as eluent to give compound S12 as a white foam (1.00 g, 90%); anomeric mixture (a : b= 1:3). b-anomer S12b: Rf = 0.32 (silica gel, EtOAc:toluene = 1:3); 1H NMR (600 MHz, CDCl3): d 7.30-7.22 (m, 10H, Ar-H), 5.81 (br, 1H), 5.35 (dd, J = 7.8, 7.8 Hz, 1H, C1-Hb), 5.09 (dd, J = 9.6, 9.0 Hz, 1H), 4.74 (d, J = 12.0 Hz, 1H), 4.65-4.58 (m, 3H), 4.49-4.44 (m, 2H), 4.06-3.97 (m, 4H), 3.88 (dd, J = 9.6, 9.0 Hz, 1H), 3.77-3.74 (m, 1H), 3.69 (ddd, J = 9.6, 4.2, 4.2 Hz, 1H), 3.53-3.52 (m, 2H), 1.83 (s, 3H, -CH3), 1.61-1.54 (m, 4H), 1.36-1.31 (m, 4H), 0.93-0.85 (m, 6H); 13C NMR (150 MHz, CDCl3): d 169.5, 154.2, 137.6, 137.6, 128.5, 128.4, 128.3, 127.9, 127.9, 127.7, 127.7, 96.5, 95.3, 78.3, 74.5, 73.9, 73.6, 73.5, 70.6, 69.2, 68.1, 68.1, 68.1, 68.0, 57.2, 57.2, 32.1, 32.0, 32.0, 20.7, 18.6, 18.6, 13.5; HRMS (ESI-TOF) m/e : Calcd for C33H45Cl3NO11PNa [M+Na]+: 790.1688 found 790.1685. a-anomer S12a: Rf = 0.44 (silica gel, EtOAc:toluene = 1:3); 1H NMR (600 MHz, CDCl3): d 7.31-7.22 (m, 10H, Ar-H), 5.67 (dd, J = 6.0, 3.6 Hz, 1H, C1-Ha), 5.21-5.16 (m, 2H), 4.75 (d, J = 12.0 Hz, 1H), 4.62-4.56 (m, 3H), 4.49-4.44 (m, 2H), 4.11-3.99 (m, 6H), 3.77 (dd, J = 10.2, 9.6 Hz, 1H), 3.50-3.49 (m, 2H), 1.89 (s, 3H, -CH3), 1.60-1.55 (m, 4H), 1.35-1.31 (m, 4H), 0.92-0.86 (m, 6H); 13C NMR (150 MHz, CDCl3): d 169.3, 154.0, 137.4, 137.4, 128.4, 128.2, 127.8, 127.8, 127.8, 127.6, 127.6, 127.6, 96.4, 96.3, 95.2, 76.4, 74.6, 73.6, 73.5, 71.1, 70.1, 68.6, 68.1, 68.0, 68.0, 67.9, 54.4, 54.3, 32.1, 32.0, 20.7, 18.5, 18.5, 13.5; HRMS (ESI-TOF) m/e : Calcd for C33H45Cl3NO11PNa [M+Na]+: 790.1688 found 790.1688.
Figure imgf000036_0001
p-Tolyl [4-O-acetyl-3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D- glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-1-thio- a-D-mannopyranoside S14. A mixture of acceptor S1329 (407 mg, 0.73 mmol, 1 equiv.) and donor S12 (900 mg, 1.17 mmol, 1.6 equiv.) and activated pulverized 4 Å molecular sieves (200 mg) in anhydrous CH2Cl2 (2 mL) was stirred under argon for 30 min. Then it was cooled to -50 °C followed by addition of TMSOTf (0.21 mL, 1.17 mmol, 1.6 equiv. with respect to acceptor) with stirring until TLC analysis indicated disappearance of starting materials (1 h). The reaction mixture was quenched with Et3N (0.30 mL), diluted with CH2Cl2 (20 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd aq. NaHCO3 (8 mL) and brine (4 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/hexane (1:3) as eluent to give compound S14 as a white powder (710 mg, 87%). Rf = 0.26 (silica gel, EtOAc:hexane = 1:3); 1H NMR (600 MHz, CDCl3): d 7.37-7.36 (m, 2H, Ar-H), 7.33-7.14 (m, 25H, Ar-H), 7.05-7.03 (m, 2H, Ar-H), 5.33 (d, J = 1.8 Hz, 1H, C1-Ha), 5.26 (d, J = 4.8 Hz, 1H), 5.07 (d, J = 9.0 Hz, 1H, C1-Hb), 4.93- 4.90 (m, 2H), 4.77 (d, J = 11.4 Hz, 1H), 4.60-4.52 (m, 5H), 4.46-4.34 (m, 5H), 4.27 (dd, J = 8.4, 8.4 Hz, 1H), 4.19 (dd, J = 9.6, 2.4 Hz, 1H), 4.15 (d, J = 12.0 Hz, 1H), 4.07 (dd, J = 9.6, 9.0 Hz, 1H), 3.84-3.81 (m, 2H), 3.64-3.63 (m, 2H), 3.57 (dd, J = 10.8, 6.0 Hz, 1H), 3.51 (dd, J = 11.4, 3.0 Hz, 1H), 3.01 (dd, J = 6.6 Hz, 1H), 2.28 (s, 3H, -CH3), 1.82 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 169.7, 154.2, 138.5, 138.3, 138.0, 137.8, 137.7, 137.6, 132.5, 130.3, 129.8, 129.7, 129.0, 128.4, 128.4, 128.3, 128.2, 128.2, 128.2, 128.2, 127.9, 127.8, 127.8, 127.7, 127.7, 127.6, 127.6, 127.6, 127.4, 125.2, 97.1, 95.4, 86.2, 78.3, 75.2, 75.1, 74.5, 74.1, 74.0, 73.6, 73.4, 73.1, 72.5, 71.7, 71.3, 70.0, 69.2, 58.1, 21.1, 20.8; HRMS (ESI-TOF) m/e : Calcd for C59H62Cl3NO12SNa [M+Na]+: 1136.2950 found 1136.2978.
Figure imgf000037_0001
p-Tolyl [3,6-di-O-benzyl-2-deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D- glucopyranosyl]-(1®2)-3,4,6-tri-O-benzyl-1-thio-a-D-mannopyranoside 18. To a well- stirred solution of compound S14 (203 mg, 0.18 mmol, 1 equiv.) in a mixture of
CH2Cl2/MeOH (10 mL, 1:1 = v/v) was added NaOMe (2.95 mg, 0.055 mmol, 0.3 equiv.) at 0 oC. After 20 min, the ice bath was removed and the reaction mixture was warmed up to room temperature with stirring until TLC analysis indicated the disappearance of starting materials (4 hrs). Upon completion, the reaction mixture was neutralized with IR-120, filtered, and concentrated in vacuo. The obtained residue was purified by silica gel column
chromatography using EtOAc/hexane (1:2) as eluent to give compound 18 as a white foam (149 mg, 76%). Rf = 0.14 (silica gel, EtOAc:hexane = 1:3); 1H NMR (600 MHz, CDCl3): d 7.39-7.37 (m, 2H, Ar-H), 7.34-7.24 (m, 25H, Ar-H), 7.06-7.05 (m, 2H, Ar-H), 5.33 (d, J = 1.8 Hz, 1H, C1-Ha), 5.24 (d, J = 4.8 Hz, 1H), 5.00 (d, J = 7.8 Hz, 1H, C1-Hb), 4.93 (d, J = 10.8 Hz, 1H), 4.78 (d, J = 11.4 Hz, 1H), 4.69-4.64 (m, 2H), 4.61 (d, J = 11.4 Hz, 2H), 4.57- 4.51 (m, 4H), 4.43 (d, J = 11.4 Hz, 1H), 4.34 (dd, J = 2.4, 2.4 Hz, 1H), 4.22-4.20 (m, 2H), 4.07-4.04 (m, 2H), 3.84-3.82 (m, 2H), 3.77-3.72 (m, 2H), 3.67-3.65 (m, 1H), 3.59-3.54 (m, 2H), 3.01 (d, J = 7.2 Hz, 1H), 2.68 (br, 1H, -OH), 2.30 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 154.2, 138.5, 138.4, 138.3, 137.9, 137.7, 137.6, 132.5, 130.3, 129.8, 128.5, 128.5, 128.4, 128.3, 128.1, 128.0, 127.9, 127.8, 127.8, 127.7, 127.6, 127.6, 127.5, 97.5, 95.4, 86.2, 79.1, 78.4, 75.3, 75.2, 74.6, 74.4, 74.2, 73.8, 73.8, 73.2, 73.1, 72.5, 71.4, 70.9, 69.3, 57.8, 21.1; HRMS (ESI-TOF) m/e : Calcd for C57H60Cl3NO11SNa [M+Na]+: 1094.2845 found 1094.2881.
Figure imgf000038_0001
Reagents and conditions in Scheme S4: (a) NIS, TfOH, 4 Å MS, -40 oC, 1 h, CH2Cl2, 93%. (b) ethylenediamine/BuOH (1:4), 90 oC, 2 h, then NaHCO3, TrocCl, CH2Cl2, 0 oC, 3 h, 81%. (c) Tf2O, pyridine, CH2Cl2, 0 oC, 4h. (d) Bu4NOAc, toluene, sonication, r.t., 8h, then NaHCO3, TrocCl, CH2Cl2, 0 oC, 3 h, 61% (2 steps). (e) DDQ, CH2Cl2, phosphate buffer (pH = 7), 0 oC to r.t., 3h, 85%. (f) hydrazine acetate , THF, r.t., 16h, 92%. (g) Tf2O, pyridine, CH2Cl2, 0 oC, 2h. (h) Bu4NOAc, toluene, sonication, r.t., 8h, 93% (2 steps). (i)
ethylenediamine/BuOH (1:4), 90 oC, 2 h, then NaHCO3, TrocCl, CH2Cl2, 0 oC, 3 h. (j) Ac2O, pyridine, CH2Cl2, r.t., 16h, 83% (2 steps).
Figure imgf000039_0001
Benzyl [4,6-O-benzylidine-3-O-p-methoxy-benzyl-2-O-levulinoyl-b-D- glucopyranosyl]-(1®4) -3,6-di-O-benzyl-2-deoxy-2-phthalimido-b-D-glucopyranoside S17. A mixture of acceptor S16.30 A mixture of acceptor S1630 (1.59 g, 2.74 mmol, 1 equiv.), donor S1526 (2.11 g, 3.57 mmol, 1.3 equiv.) and activated pulverized 4 Å MS (5.00 g) in anhydrous CH2Cl2 (50 mL) was stirred under argon for 1 h. Then, the reaction mixture was cooled to -40 °C and NIS (1.23 g, 0.49 mmol, 2 equiv.) was added, followed by TfOH (0.5 M in Et2O, 1.37 mL, 0.69 mmol, 0.25 equiv.). The reaction was continued until TLC indicated the disappearance of starting materials (2 h). Upon completion, the reaction mixture was quenched with Et3N (0.7 mL) and filtered through a pad of Celite. The filtrate was diluted with CH2Cl2 (50 mL), washed with 20% aq. Na2S2O3 (15 mL), satd. aq. NaHCO3 (20 mL), and brine (10 mL). The separated organic layer was dried over MgSO4 and concentrated in vacuo. The obtained residue was purified by silica gel column
chromatography using EtOAc/hexane (2:3) as eluent to give compound S17 as a white foam (2.68 g, 93%). Rf = 0.43 (silica gel, acetone:toluene = 1:6); 1H NMR (600 MHz, CDCl3): d 7.75 (br, 1H, Ar-H), 7.63 (br, 2H, Ar-H), 7.50 (br, 1H, Ar-H), 7.46-7.45 (m, 2H, Ar-H), 7.39- 7.32 (m, 7H, Ar-H), 7.29-7.26 (m, 1H, Ar-H), 7.20-7.18 (m, 2H, Ar-H), 7.07-7.05 (m, 1H, Ar-H), 7.02-7.01 (m, 4H, Ar-H), 6.98-6.97 (m, 2H, Ar-H), 6.87-6.83 (m, 5H, Ar-H), 5.44 (s, 1H, Ph-CH), 5.10-5.08 (m, 1H, C1-Hb), 4.92 (dd, J = 9.0, 8.4 Hz, 1H), 4.81-4.71 (m, 4H), 4.58 (d, J = 7.8 Hz, 1H, C1-Hb), 4.56 (d, J = 4.2 Hz, 1H), 4.47 (d, J = 6.0 Hz, 1H), 4.45 (d, J = 6.6 Hz, 1H), 4.36 (d, J = 12.6 Hz, 1H), 4.23 (dd, J = 10.2, 4.8 Hz, 1H), 4.20-4.19 (m, 2H), 4.09-4.06 (m, 1H), 3.87 (dd, J = 11.4, 3.0 Hz, 1H), 3.79-3.78 (m, 1H), 3.78 (s, 3H, -CH3), 3.59 (dd, J = 9.6, 9.0 Hz, 1H), 3.55-3.51 (m, 2H), 3.43 (dd, J = 10.2, 10.2 Hz, 1H), 3.17 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.81-2.76 (m, 1H), 2.70-2.65 (m, 1H), 2.50-2.38 (m, 2H), 2.20 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 206.2, 171.1, 159.2, 138.6, 138.1, 137.3, 133.5, 131.6, 130.4, 129.4, 129.0, 128.5, 128.2, 128.1, 127.9, 127.8, 127.7, 127.5, 127.5, 127.0, 126.0, 123.1, 113.6, 101.1, 100.6, 97.4, 81.7, 78.0, 77.9, 76.6, 74.8, 74.5, 73.7, 73.6, 70.7, 68.6, 67.7, 65.8, 55.7, 55.3, 37.7, 29.9, 27.8; HRMS (ESI-TOF) m/e : Calcd for
C61H61NO15Na [M+Na]+: 1070.3933 found 1070.3933.
Figure imgf000040_0001
Benzyl [4,6-O-benzylidine-3-O-p-methoxy-benzyl-b-D-glucopyranosyl]-(1®4)- 3,6-di-O- benzyl-2-deoxy-2-(2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranoside S18. A solution of disaccharide S17 (625 mg, 0.596 mmol, 1 equiv.) in ethylene diamine/n- BuOH (7 mL, 2:8 = v/v) was stirred at 90 oC for 2 h. The solvent was removed by rotary evaporation under high vacuum and co-evaporated with toluene twice to remove traces of water. The obtained residue was dissolved in anhydrous CH2Cl2 (15 mL) and treated with NaHCO3 (250 mg, 2.98 mmol, 5 equiv.) and 2,2,2-trichloro ethyl chloroformate (0.41 mL, 2.98 mmol, 5 equiv.) at 0 oC under argon for 3h. Upon completion, the reaction mixture was diluted with CH2Cl2 (20 mL), washed with water (20 mL) and brine (10 mL). The organic layer was dried over MgSO4 and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:4) as eluent to give compound S18 as a white powder (481 mg, 81%). Rf = 0.60 (silica gel, EtOAc:toluene = 1:2); 1H NMR (600 MHz, CDCl3): d 7.47-7.46 (m, 2H, Ar-H), 7.40-7.25 (m, 20H, Ar-H), 6.86-6.85 (m, 2H, Ar-H), 5.46 (s, 1H, Ph-CH), 5.12 (br, 1H), 4.88-4.85 (m, 3H), 4.71-4.55 (m, 9H, 2C1-Hb), 4.06-4.03 (m, 2H), 3.99 (dd, J = 11.4, 3.6 Hz, 1H), 3.87 (br, 1H), 3.80 (dd, J = 11.4, 1.8 Hz, 1H), 3.78 (s, 3H, -CH3), 3.56 (dd, J = 9.6, 9.0 Hz, 1H), 3.52-3.45 (m, 5H), 3.15 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 3.03 (br, 1H, -OH); 13C NMR (150 MHz, CDCl3): d 159.3, 153.8, 138.4, 137.7, 137.3, 137.2, 130.4, 129.6, 128.9, 128.4, 128.4, 128.3, 128.2, 128.0, 127.8, 127.8, 127.6, 127.4, 126.0, 113.8, 103.2, 101.1, 99.2, 95.5, 81.3, 79.9, 79.2, 77.7, 74.9, 74.5, 74.3, 74.2, 73.5, 70.7, 68.6, 68.2, 66.2, 57.6, 55.2; HRMS (ESI-TOF) m/e : Calcd for
C51H54Cl3NO13Na [M+Na]+: 1016.2553 found 1016.2554.
Figure imgf000040_0002
Benzyl [2-O-acetyl-4,6-O-benzylidine-3-O-p-methoxy-benzyl-b-D- mannopyranosyl]- (1®4)-3,6-di-O-benzyl-2-deoxy-2-(2,2,2- trichloroethoxy)carbonylamino-b-D-glucopyranoside S19. From S18: To a stirred solution of disaccharide S18 (1.02 g, 1.02 mmol, 1 equiv.) in anhydrous CH2Cl2 (13 mL) was added anhydrous pyridine (0.58 mL, 7.17 mmol, 7 equiv.), followed by dropwise addition of Tf2O (0.30 mL, 1.79 mmol, 1.75 equiv.) at 0 oC under argon. The reaction mixture was stirred at 0 oC until TLC indicated the disappearance of starting material (4 hrs). Upon completion, it was diluted with CH2Cl2 (20 mL), washed with 0.5N HCl (20 mL) and brine (10 mL). The separated organic layer was dried over MgSO4 and concentrated in vacuo. The crude residue was mixed with Bu4NOAc (927 mg, 3.07 mmol, 3 equiv.) and dissolved in toluene (20 mL). The solvent was removed in vacuo and the residue was co-evaporated with toluene twice; then, redissolved in anhydrous toluene (13 mL) and the mixture was sonicated for 8 h. During this time, we observed a partial deprotection of NHTroc and the reaction mixture was concentrated under high vacuum. The obtained residue was dissolved in CH2Cl2 (13 mL) and treated with NaHCO3 (430 mg, 5.12 mmol, 5 equiv.) and 2,2,2-trichloro ethyl chloroformate (0.71 mL, 5.12 mmol, 5 equiv.) at 0 oC under argon. After stirring for 3h, the reaction mixture was diluted with CH2Cl2 (20 mL), washed with water (20 mL) and brine (10 mL). The separated organic layer was dried over MgSO4 and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:5) as eluent to give compound S19 as a white powder (650 mg, 61%).
From S21: A solution of disaccharide S21 (1.20 g, 1.21 mmol, 1 equiv.) in ethylene diamine/n-BuOH (15 mL, 2:8 = v/v) was stirred at 90 oC for 2 h. After removal of solvent, the crude product was co-evaporated with toluene twice. The obtained residue was dissolved in CH2Cl2 (30 mL) and treated with NaHCO3 (508 mg, 6.05 mmol, 5 equiv.) and 2,2,2- trichloro ethyl chloroformate (0.83 mL, 6.05 mmol, 5 equiv.) at 0 oC under argon. After 3 h, the reaction mixture was diluted with CH2Cl2 (45 mL), washed with water (30 mL) and brine (15 mL). The organic layer was dried over MgSO4, concentrated, co-evaporated with toluene twice, and evaporated in vacuo. The obtained residue was subjected directly to the acetylation conditions Ac2O (7 mL) in pyridine (14 mL), with the temperature slowly warmed up from 0 oC to room temperature in16 h. The reaction mixture was concentrated under high vacuum and purified by silica gel column chromatography using acetone/toluene (1:5) as eluent to give compound S19 as a white powder (1.04 g, 83%). Rf = 0.54 (silica gel, EtOAc:toluene = 1:3); 1H NMR (600 MHz, CDCl3): d 7.48-7.46 (m, 2H, Ar-H), 7.39-7.35 (m, 3H, Ar-H), 7.33-7.25 (m, 14H, Ar-H), 7.24-7.21 (m, 3H, Ar-H), 6.84-6.82 (m, 2H, Ar-H), 5.50 (s, 1H, Ph-CH), 5.41 (d, J = 3.0 Hz, 1H), 5.09 (br, 1H), 4.92 (d, J = 10.8 Hz, 1H), 4.88 (d, J = 12.0 Hz, 1H), 4.72-4.62 (m, 5H, 2C1-Hb), 4.58-4.56 (m, 3H), 4.47-4.44 (m, 2H), 4.08 (dd, J = 10.2, 4.8 Hz, 1H), 4.04 (dd, J = 9.0, 8.4 Hz, 1H), 3.87-3.84 (m, 2H), 3.78-3.72 (m, 5H, -CH3), 3.59 (dd, J = 10.2, 10.2 Hz, 1H), 3.45-3.43 (m, 2H), 3.38 (ddd, J = 8.4, 8.4, 8.4 Hz, 1H), 3.10 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.07 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.3, 159.3, 153.8, 138.4, 137.8, 137.4, 137.1, 129.7, 129.2, 128.9, 128.5, 128.4, 128.3, 128.2, 128.0, 128.0, 127.9, 127.8, 127.7, 126.1, 113.8, 101.4, 99.1, 99.1, 77.8, 75.3, 74.4, 73.5, 71.4, 70.8, 69.1, 68.5, 68.4, 67.0, 57.5, 55.2, 21.0; HRMS (ESI-TOF) m/e : Calcd for C53H56Cl3NO14Na [M+Na]+: 1058.2658 found 1058.2657.
Figure imgf000042_0001
Benzyl [2-O-acetyl-4,6-O-benzylidine-b-D-mannopyranosyl]-(1®4)-3,6-di-O- benzyl-2-deoxy -2-(2,2,2-trichloroethoxy)carbonylamino-b-D-glucopyranoside 13. To a stirring solution of S19 (120 mg, 0.12 mmol, 1 equiv.) in a mixture of CH2Cl2/phosphate buffer (pH = 7) (3 mL, 9:1 = v/v) was added 2,3-dichloro-5,6-dicyanobenzoquinone (52.5 mg, 0.23 mmol, 2.2 equiv.) at 0 oC. The reaction mixture was vigorously stirred until TLC indicated the disappearance of starting material (3 hrs). Upon completion, the reaction mixture was diluted with CH2Cl2 (10 mL), washed with satd. aq. NaHCO3 (8 mL) and brine (4 mL), and the organic phase was dried over MgSO4, filtered and concentrated. The obtained residue was purified by silica gel column chromatography using EtOAc/toluene (1:4) as eluent to give compound 13 as a white powder (90 mg, 85%). Rf = 0.29 (silica gel, EtOAc:toluene = 1:3); 1H NMR (600 MHz, CDCl3): d 7.45-7.44 (m, 2H, Ar-H), 7.39-7.34 (m, 7H, Ar-H), 7.33-7.26 (m, 11H, Ar-H), 5.47 (s, 1H, Ph-CH), 5.23 (d, J = 3.6 Hz, 1H), 5.06 (br, 1H), 4.91 (d, J = 11.4 Hz, 1H), 4.87 (d, J = 12.0 Hz, 1H), 4.74 (d, J = 12.0 Hz, 1H), 4.68- 4.61 (m, 4H, 2C1-Hb), 4.58-4.56 (m, 2H), 4.48 (d, J = 12.0 Hz, 1H), 4.08 (dd, J = 10.2, 4.8 Hz, 1H), 4.04 (dd, J = 9.0, 9.0 Hz, 1H), 3.83 (br, 1H), 3.78 (dd, J = 11.4, 3.0 Hz, 1H), 3.73- 3.70 (m, 2H), 3.64 (dd, J = 9.6, 3.6 Hz, 1H), 3.56 (dd, J = 10.2, 10.2 Hz, 1H), 3.43-3.36 (m, 2H), 3.11 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.21 (d, J = 3.6 Hz, 1H), 2.11 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.5, 153.8, 138.5, 137.8, 137.1, 137.0, 129.3, 128.6, 128.6, 128.4, 128.4, 128.3, 128.1, 128.0, 128.0, 127.9, 127.8, 127.7, 126.2, 102.1, 99.1, 99.0, 78.5, 78.2, 74.4, 74.4, 73.6, 71.2, 70.8, 69.7, 68.4, 68.4, 66.7, 57.5; HRMS (ESI-TOF) m/e : Calcd for C45H49Cl3NO13 [M+H]+: 916.2264 found 916.2252.
Figure imgf000042_0002
Benzyl [4,6-O-benzylidine-3-O-p-methoxy-benzyl-b-D-glucopyranosyl]-(1®4)- 3,6-di-O- benzyl-2-deoxy-2-phthalimido-b-D-glucopyranoside S20. To a stirring solution of starting material S17 (2.48 g, 2.37 mmol, 1 equiv.) in anhydrous THF (55 mL) was added hydrazine acetate (327 mg, 3.55 mmol, 1.5 equiv.) at room temperature under argon. The reaction mixture was vigorously stirred until TLC indicated the disappearance of starting material (16 hrs). Upon completion, the reaction mixture was diluted with EtOAc (150 mL), washed with water (60 mL) and brine (30 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using EtOAc/Hexane (1:2) as eluent to give compound S20 as a white foam (2.07 g, 92%). Rf = 0.54 (silica gel, EtOAc:hexane = 1:1); 1H NMR (600 MHz, CDCl3): d 7.79-7.54 (m, 4H, Ar-H), 7.51-7.44 (m, 2H, Ar-H), 7.38-7.33 (m, 7H, Ar-H), 7.30-7.27 (m, 3H, Ar-H), 7.08-7.04 (m, 1H, Ar-H), 7.02-7.01 (m, 4H, Ar-H), 6.98-6.97 (m, 2H, Ar-H), 6.89-6.81 (m, 5H, Ar-H), 5.46 (s, 1H, Ph-CH), 5.09 (d, J = 8.4 Hz, 1H, C1-Hb), 4.85 (d, J = 11.4 Hz, 1H), 4.77 (d, J = 12.6 Hz, 1H), 4.75 (d, J = 4.2 Hz, 1H), 4.73 (d, J = 4.2 Hz, 1H), 4.68 (d, J = 11.4 Hz, 1H), 4.62 (d, J = 7.2 Hz, 1H, C1-Hb), 4.56 (d, J = 12.0 Hz, 1H), 4.46 (d, J = 12.0 Hz, 1H), 4.38 (d, J = 12.0 Hz, 1H), 4.32 (dd, J = 10.8, 8.4 Hz, 1H), 4.21 (d, J = 10.8, 8.4 Hz, 1H), 4.15-4.10 (m, 2H), 4.04 (dd, J = 11.4, 3.0 Hz, 1H), 3.82 (dd, J = 11.4, 1.8 Hz, 1H), 3.78 (s, 3H, -CH3), 3.61 (ddd, J = 9.6, 3.0, 3.0 Hz, 1H), 3.56 (dd, J = 3.0, 3.0 Hz, 1H), 3.52-3.45 (m, 3H), 3.18 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.98 (br, 1H, -OH); 13C NMR (150 MHz, CDCl3): d 167.9, 159.3, 138.4, 137.8, 137.3, 137.2, 133.6, 131.6, 130.5, 129.7, 128.9, 128.4, 128.2, 128.1, 128.0, 127.9, 127.8, 127.5, 127.4, 127.1, 126.0, 123.2, 113.8, 103.4, 101.1, 97.5, 81.3, 79.5, 78.8, 77.8, 75.0, 74.7, 74.5, 74.2, 73.6, 70.8, 68.6, 68.2, 66.2, 55.8, 55.3; HRMS (ESI-TOF) m/e : Calcd for C56H55NO13Na [M+Na]+: 972.3565 found 972.3567.
Figure imgf000043_0001
Benzyl [2-O-acetyl-4,6-O-benzylidine-3-O-p-methoxy-benzyl-b-D- mannopyranosyl]-(1®4) -3,6-di-O-benzyl-2-deoxy-2-phthalimido-b-D-glucopyranoside S21. To a stirred solution of disaccharide S20 (936 mg, 0.985 mmol, 1 equiv.) in anhydrous CH2Cl2 (12 mL) was added anhydrous pyridine (0.56 mL, 6.90 mmol, 7 equiv.), then trifluoromethanesulfonic anhydride (0.29 mL, 1.72 mmol, 1.75 equiv.) was added dropwise at 0 oC under argon and the mixture was stirred at 0 oC until TLC indicated the disappearance of starting material (2 h). Upon completion, the reaction mixture was diluted with CH2Cl2 (20 mL), washed with 0.5 N HCl (20 mL) and brine (10 mL). The separated organic layer was dried over MgSO4, concentrated in vacuo and the obtained residue was used as is for further reactions. The above-obtained residue was added Bu4NOAc (594 mg, 1.97 mmol, 2 equiv.) and dissolved in toluene (18 mL). The solvent was removed in vacuo and the residue was co-evaporated with toluene twice to remove traces of water. The residue was redissolved in anhydrous toluene (12 mL) and the mixture was sonicated for 8 h. Upon completion, the reaction mixture was diluted with EtOAc (20 mL), washed with water (20 mL) and brine (10 mL). The separated organic layer was dried over MgSO4 and concentrated. The obtained residue was purified by silica gel column chromatography using EtOAc/hexane (1:2) as eluent to give compound S21 as white powder (913 mg, 93%). Rf = 0.29 (silica gel, EtOAc:hexane = 1:2); 1H NMR (600 MHz, CDCl3): d 7.76-7.49 (m, 4H, Ar-H), 7.48-7.46 (m, 2H, Ar-H), 7.39-7.31 (m, 7H, Ar-H), 7.26-7.22 (m, 3H, Ar-H), 7.10-7.06 (m, 1H, Ar-H), 7.04-7.03 (m, 4H, Ar-H), 6.99-6.98 (m, 2H, Ar-H), 6.90-6.84 (m, 5H, Ar-H), 5.49 (s, 1H, Ph- CH), 5.44 (d, J = 3.0 Hz, 1H), 5.09 (d, J = 7.8 Hz, 1H, C1-Hb), 4.82-4.76 (m, 3H), 4.68 (s, 1H, C1-Hb), 4.58 (d, J = 12.0 Hz, 1H), 4.49-4.44 (m, 3H), 4.38 (d, J = 12.6 Hz, 1H), 4.26- 4.19 (m, 2H), 4.17-4.11 (m, 2H), 3.86-3.82 (m, 2H), 3.78 (s, 3H, -CH3), 3.78-3.76 (m, 1H), 3.57-3.54 (m, 2H), 3.44 (dd, J = 10.2, 3.6 Hz, 1H), 3.13 (ddd, J = 9.6, 9.6, 4.8 Hz, 1H), 2.15 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.2, 167.8, 159.2, 138.5, 137.8, 137.4, 137.1, 133.6, 131.5, 129.7, 129.2, 128.9, 128.5, 128.1, 128.1, 127.9, 127.9, 127.8, 127.7, 127.6, 127.5, 127.1, 126.0, 123.1, 113.8, 101.4, 99.5, 97.3, 79.1, 77.7, 76.9, 75.4, 74.5, 74.3, 73.5, 71.3, 70.7, 69.1, 68.4, 68.3, 66.9, 55.6, 55.2, 21.0; HRMS (ESI-TOF) m/e : Calcd for C58H57NO14Na [M+Na]+: 1014.3671 found 1014.3699.
Figure imgf000045_0001
Reagents and conditions in Scheme S5: (a) Br2, CH2Cl2, 0 oC, 10 min., then p-nitrophenol, Ag2O, CH3CN, 1h, 73%. (b) NaBrO3, Na2S2O4, H2O, EtOAc, r.t., 1.5h, 93%. (c) LiOH·H2O, MeOH, r.t., 16h, 84%. (d) Ac2O, pyridine, r.t., 16 h, 90%. (e) Br2, CH2Cl2, 0 oC, 10 min., then p-nitrophenol, Ag2O, CH3CN, 1h, 74%. (f) NaBrO3, Na2S2O4, H2O, EtOAc, r.t., 1.5h, 97% (g) LiOH·H2O, MeOH, r.t., 16h, 94%.
Figure imgf000045_0002
p-Nitrophenyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro- D-erythro -a-L-manno-non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-b- D-galactopyranoside S22. To a stirred solution of thioglycoside 4 (115 mg, 0.11 mmol, 1 equiv.) in anhydrous CH2Cl2 (2 mL) at 0 oC was added bromine (6.02 µL, 0.12 mmol, 1.1 equiv.). After the reaction mixture was vigorously stirred for 10 min, the solvent was removed in vacuo and the residue was co-evaporated with toluene twice to remove traces of water. Thus obtained residue was dissolved in anhydrous CH3CN (2 mL) and treated with 4- nitrophenol (25.3 mg, 0.18 mmol, 1.7 equiv.) and Ag2O (124 mg, 0.53 mmol, 5 equiv.). The reaction mixture was vigorously stirred in the dark under N2 until TLC indicated the disappearance of starting material (1 h). Upon completion, the reaction mixture was diluted with EtOAc (10 mL) and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO3 (4 mL) and brine (3 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent to give compound S22 as a white powder (85 mg, 73%). Rf = 0.46 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 8.13-8.11 (m, 2H, Ar-H), 7.96-7.94 (m, 2H, Ar-H), 7.91-7.89 (m, 2H, Ar-H), 7.49- 7.44 (m, 2H, Ar-H), 7.35-7.30 (m, 6H, Ar-H), 7.24-7.22 (m, 2H, Ar-H), 7.20-7.18 (m, 2H, Ar-H), 7.13-7.11 (m, 1H, Ar-H), 6.09 (dd, J = 10.2, 7.8 Hz, 1H), 5.65-5.59 (dd, J = 10.2, 3.0 Hz, 1H, C1-Hb), 5.35 (d, J = 9.6 Hz, 1H), 5.28 (dd, J = 9.6, 1.8 Hz, 1H), 5.19 (dd, J = 27.0, 10.8 Hz, 1H, sia-C4-H), 5.04 (dd, J = 51.0, 1.8 Hz, 1H, sia-C3-H), 4.72-4.67 (m, 2H), 4.44 (dd, J = 12.6, 3.6 Hz, 1H), 4.40 (d, J = 3.0 Hz, 1H), 4.37 (dd, J = 8.4, 6.6 Hz, 1H), 4.31 (d, J = 10.8 Hz, 1H), 4.18 (ddd, J = 4.2, 4.2, 4.2 Hz, 1H), 4.08 (dd, J = 12.6, 6.6 Hz, 1H), 3.89- 3.80 (m, 5H, -CH3), 2.26 (s, 6H, -2CH3), 2.10 (s, 3H, -CH3), 1.93 (s, 3H, -CH3), 1.92 (s, 3H, - CH3); 13C NMR (150 MHz, CDCl3): d 171.1, 170.8, 170.4, 170.3, 170.2, 165.5, 165.5, 165.4, 165.3, 161.8, 142.6, 138.0, 133.2, 133.1, 129.8, 129.7, 129.4, 129.0, 128.4, 128.3, 128.2, 128.1, 128.0, 127.5, 125.6, 116.8, 98.8, 98.7, 98.2, 88.1, 86.8, 75.0, 73.9, 73.7, 73.2, 71.6, 69.7, 69.1, 69.0, 67.3, 67.2, 63.4, 63.3, 53.4, 45.1, 23.3, 21.2, 20.8, 20.7, 20.6; 19F NMR (376 MHz, CDCl3): d -215.5; HRMS (ESI-TOF) m/e : Calcd for C53H55FN2O22Na [M+Na]+: 1113.3123 found 1113.3131.
Figure imgf000046_0001
p-Nitrophenyl [methyl 5-acetamido-4,7,8,9-tetra-O-acetyl-3,5-dideoxy-3-fluoro- D-erythro- a-L-manno-non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-b-D- galactopyranoside S23. To a stirring solution of compound S22 (63.0 mg, 0.058 mmol, 1 equiv.) in EtOAc (0.8 mL) was added NaBrO3 (85 %, 39.2 mg, 0.26 mmol, 4.5 equiv.) in H2O (0.6 mL) followed by a slow addition of Na2S2O4 (40.2 mg, 0.23 mmol, 4 equiv.) in H2O (1.2 mL) at room temperature. The reaction mixture was stirred until TLC indicated the disappearance of the starting material (1.5 h). Upon completion of the reaction, the reaction mixture was diluted with EtOAc (10 mL), washed with 20% aq. Na2S2O3 (5 mL) and brine (3 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo, and the obtained residue was purified by silica gel column chromatography using acetone/toluene (3:5) as eluent to give compound S23 as a white powder (54 mg, 93%). Rf = 0.40 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 8.13-8.12 (m, 2H, Ar-H), 7.99-7.98 (m, 2H, Ar-H), 7.95-7.94 (m, 2H, Ar-H), 7.50-7.46 (m, 2H, Ar-H), 7.37-7.32 (m, 4H, Ar-H), 7.19-7.18 (m, 2H, Ar-H), 6.05 (dd, J = 10.2, 9.8 Hz, 1H), 5.53 (ddd, J = 9.0, 6.0, 3.0 Hz, 1H), 5.49-5.45 (m, 2H, C1-Hb), 5.36 (d, J = 9.0 Hz, 1H), 5.27 (dd, J = 9.0, 1.8 Hz, 1H), 5.19 (dd, J = 27.0, 11.4 Hz, 1H, sia-C4-H), 5.05 (dd, J = 51.6, 1.8 Hz, 1H, sia-C3-H), 4.47 (d, J = 3.0 Hz, 1H), 4.37 (dd, J = 12.6, 3.0 Hz, 1H), 4.26 (dd, J = 10.8, 1.2 Hz, 1H), 4.18 (dd, J = 6.6, 6.6 Hz, 1H), 4.13-4.07 (m, 1H), 4.05 (dd, J = 12.6, 6.6 Hz, 1H), 3.99-3.98 (m, 2H), 3.85 (s, 3H, -CH3), 2.99 (br, 1H, -OH), 2.17 (s, 3H, -CH3), 2.08 (s, 3H, -CH3), 2.07 (s, 3H, -CH3), 1.93 (s, 3H, -CH3), 1.88 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 170.9, 170.8, 170.5, 170.3, 165.6, 165.6, 165.3, 161.8, 142.9, 133.4, 133.3, 129.8, 129.7, 129.2, 129.1, 129.0, 128.4, 128.4, 128.2, 125.6, 125.3, 117.1, 99.0, 98.1, 98.0, 88.3, 87.0, 73.9, 73.3, 71.6, 69.2, 69.1, 69.0, 67.9, 67.2, 66.5, 63.6, 62.9, 53.4, 45.1, 23.3, 21.1, 20.7, 20.6, 20.6; 19F NMR (376 MHz, CDCl3): d -216.0; HRMS (ESI-TOF) m/e : Calcd for C46H50FN2O22 [M+H]+:
1001.2834 found 1001.2833.
Figure imgf000047_0001
p-Nitrophenyl [methyl 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-a-L-manno- non-2 -ulopyranosonate]-(2®6)-b-D-galactopyranoside 2. To a solution of compound S23 (53 mg, 0.053 mmol, 1 equiv.) in methanol (5 mL) was added LiOH·H2O (22.2 mg, 0.53 mmol, 10 equiv.) in water (1 mL). After stirring for 16 h at room temperature, the reaction mixture was neutralized with IR-120, filtered, and concentrated in vacuo. The obtained residue was purified by (BIO-RAD) Biogel P-2 column chromatography (eluting with water) to give compound 2 (27 mg, 84%).1H NMR (600 MHz, D2O): d 8.29-8.28 (m, 2H, Ar-H), 7.30-7.29 (m, 2H, Ar-H), 5.21 (dd, J = 51.6, 2.4 Hz, 1H, sia-C3-H), 5.18 (d, J = 7.8 Hz, C1- Hb), 4.17 (dd, J = 9.0, 9.0 Hz, 1H), 4.07-4.00 (m, 3H), 3.91-3.77 (m, 7H), 3.63 (dd, J = 12.0, 6.6 Hz, 1H), 3.57 (dd, J = 9.0, 1.8 Hz, 1H), 2.04 (s, 3H, -CH3); 13C NMR (150 MHz, D2O): d 175.0, 170.8, 161.9, 142.5, 126.1, 116.5, 100.0, 98.9, 98.9, 91.6, 90.3, 73.9, 72.4, 72.4, 71.6, 70.3, 69.7, 69.5, 68.4, 68.1, 63.7, 62.6, 46.8, 46.8, 22.0; 19F NMR (376 MHz, CDCl3): d - 217.6; HRMS (ESI-TOF) m/e : Calcd for C23H32FN2O16 [M+H]+: 611.1730 found 611.1732.
Figure imgf000048_0001
p-Tolyl [methyl 5-acetamido-3,4,7,8,9-penta-O-acetyl-5-deoxy-D-erythro-a-L- gluco-non -2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-1-thio-b-D- galactopyranoside S24. To a stirring solution of starting material 6 (174 mg, 0.16 mmol, 1 equiv.) in pyridine (2 mL) was added Ac2O (1 mL). The reaction mixture was vigorously stirred for 16 h at room temperature, then concentrated under high vacuum. The obtained residue was purified by silica gel column chromatography using acetone/toluene (1:2) as eluent to give compound S24 as a white powder (162 mg, 90%). Rf = 0.49 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 7.94-7.92 (m, 2H, Ar-H), 7.88-7.87 (m, 2H, Ar-H), 7.48-7.44 (m, 2H, Ar-H), 7.40-7.38 (m, 2H, Ar-H), 7.35-7.27 (m, 6H, Ar-H), 7.23-7.20 (m, 2H, Ar-H), 7.18-7.16 (m, 1H, Ar-H), 7.05-7.03 (m, 2H, Ar-H), 5.80 (dd, J = 10.2.9.6 Hz, 1H), 5.44-5.42 (m, 2H), 5.35-5.29 (m, 3H), 5.25 (dd, J = 8.4, 1.8 Hz, 1H), 4.95 (d, J = 10.2 Hz, 1H, C1-Hb), 4.67-4.61 (m, 3H), 4.33 (ddd, J = 10.2, 10.2, 10.2 Hz, 1H), 4.25- 4.22 (m, 2H), 4.03-3.97 (m, 3H), 3.92-3.89 (m, 1H), 3.75 (s, 3H, -CH3), 2.29 (s, 3H, -CH3), 2.15 (s, 3H, -CH3), 2.07 (s, 3H, -CH3), 2.00 (s, 3H, -CH3), 1.95 (s, 3H, -CH3), 1.94 (s, 3H, - CH3), 1.89 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.0, 170.5, 170.3, 170.0, 169.3, 168.5, 168.0, 165.7, 165.2, 138.4, 137.6, 133.1, 132.9, 132.5, 129.8, 129.7, 129.7, 129.5, 129.2, 129.1, 128.3, 128.2, 128.0, 127.4, 127.2, 98.9, 86.5, 76.9, 75.5, 74.6, 74.3, 72.7, 71.6, 71.5, 68.5, 68.3, 66.9, 62.6, 62.5, 52.7, 48.4, 23.0, 21.1, 20.8, 20.7, 20.6, 20.6, 20.5; HRMS (ESI-TOF) m/e : Calcd for C56H61NO21SNa [M+Na]+: 1138.3349 found 1138.3358.
Figure imgf000048_0002
p-Nitrophenyl [methyl 5-acetamido-3,4,7,8,9-penta-O-acetyl-5-deoxy-D-erythro- a-L-gluco- non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-4-O-benzyl-b-D- galactopyranoside S25. To a stirring solution of thioglycoside S24 (132 mg, 0.12 mmol, 1 equiv.) in anhydrous CH2Cl2 (2.5 mL) at 0 oC was added bromine (6.67 µL, 0.13 mmol, 1.1 equiv.). After vigorously stirring for 10 min, the solvent was removed in vacuo and the residue was co-evaporated with toluene twice to remove traces of water. The obtained residue was dissolved in anhydrous CH3CN (2.5 mL) and treated with 4-nitrophenol (28.0 mg, 0.20 mmol, 1.7 equiv.) and Ag2O (137 mg, 0.59 mmol, 5 equiv.). The reaction mixture was vigorously stirred in the dark under N2 until TLC indicated the disappearance of starting material (1 h). Upon completion of the reaction, the reaction mixture was diluted with EtOAc (12 mL), and filtered through a pad of Celite. The filtrate was washed twice with satd. aq. NaHCO3 (5 mL) and brine (3 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo, and the obtained residue was purified by silica gel column chromatography using acetone/toluene (3:5) as eluent to give compound S25 as a white powder (99 mg, 74%). Rf = 0.51 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 8.15-8.13 (m, 2H, Ar-H), 7.95-7.92 (m, 4H, Ar-H), 7.50-7.44 (m, 2H, Ar- H), 7.36-7.31 (m, 6H, Ar-H), 7.24-7.19 (m, 2H, Ar-H), 7.17-7.15 (m, 3H, Ar-H), 6.10 (dd, J = 10.2, 7.8 Hz, 1H), 5.54 (dd, J = 10.2, 3.0 Hz, 1H), 5.52 (d, J = 7.8 Hz, 1H, C1-Hb), 5.48 (ddd, J = 10.2, 7.2, 3.0 Hz, 1H), 5.39 (d, J = 10.2 Hz, 1H), 5.31-5.29 (m, 2H), 5.23 (dd, J = 9.6, 1.8 Hz, 1H), 4.73 (dd, J = 10.8, 2.4 Hz, 1H), 4.71-4.65 (m, 2H), 4.32-4.30 (m, 3H), 4.19 (dd, J = 7.2, 7.2 Hz, 1H), 3.97 (dd, J = 12.6, 7.2 Hz, 1H), 3.88-3.86 (m, 2H), 3.83 (s, 3H, -CH3), 2.24 (s, 3H, -CH3), 2.12 (s, 3H, -CH3), 2.01 (s, 3H, -CH3), 1.98 (s, 3H, -CH3), 1.90 (s, 3H, -CH3), 1.88 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.0, 170.7 (2C), 170,0, 169.6, 168.5, 168.3, 165.7, 165.3, 161.7, 142.7, 137.9, 133.3, 133.2, 129.9, 129.7, 129.3, 128.9, 128.4, 128.3, 128.2, 128.0, 127.6, 125.7, 116.8, 99.7, 98.4, 75.1, 74.1, 74.0, 73.9, 72.8, 71.6, 71.1, 69.7, 67.6, 67.0, 63.8, 63.3, 52.9, 48.4, 23.0, 20.9, 20.8, 20.7, 20.6; HRMS (ESI- TOF) m/e : Calcd for C55H59N2O24 [M+H]+: 1131.3452 found 1131.3440.
Figure imgf000049_0001
p-Nitrophenyl [methyl 5-acetamido-3,4,7,8,9-penta-O-acetyl-5-deoxy-D-erythro- a-L-gluco- non-2-ulopyranosonate]-(2®6)-2,3-di-O-benzoyl-b-D-galactopyranoside S26. To a stirring solution of compound S25 (91.0 mg, 0.080 mmol, 1 equiv.) in EtOAc (1.2 mL) was added NaBrO3 (54.6 mg, 0.36 mmol, 4.5 equiv.) in H2O (0.9 mL) followed by a slow addition of Na2S2O4 (85 %, 56.0 mg, 0.32 mmol, 4 equiv.) in H2O (1.8 mL) at room temperature. The reaction mixture was stirred until TLC indicated the disappearance of the starting material (1.5 h). Upon completion, the reaction mixture was diluted with EtOAc (15 mL), washed with 20% aq. Na2S2O3 (7 mL) and brine (4 mL). The organic phase was dried over MgSO4, filtered, and concentrated in vacuo. The obtained residue was purified by silica gel column chromatography using acetone/toluene (3:5) as eluent to give compound S26 as a white powder (81 mg, 97%). Rf = 0.23 (silica gel, acetone:toluene = 2:3); 1H NMR (600 MHz, CDCl3): d 8.18-8.16 (m, 2H, Ar-H), 8.00-7.99 (m, 2H, Ar-H), 7.94-7.93 (m, 2H, Ar- H), 7.51-7.46 (m, 2H, Ar-H), 7.38-7.32 (m, 4H, Ar-H), 7.15-7.13 (m, 2H, Ar-H), 6.07 (dd, J = 10.2, 7.8 Hz, 1H), 5.46-5.34 (m, 5H, C1-Hb), 5.30 (d, J = 10.2 Hz, 1H), 5.22 (dd, J = 7.8, 1.8 Hz, 1H), 4.60 (dd, J = 10.8, 1.8 Hz, 1H), 4.43 (d, J = 3.0 Hz, 1H), 4.33 (dd, J = 12.6, 2.4 Hz, 1H), 4.26 (ddd, J = 10.2, 10.2, 10.2 Hz, 1H), 4.12 (dd, J = 6.6, 6.6 Hz, 1H), 4.05 (dd, J = 10.2, 6.6 Hz, 1H), 3.99 (dd, J = 10.2, 6.6 Hz, 1H), 3.93 (dd, J = 12.6, 7.2 Hz, 1H), 3.83 (s, 3H, -CH3), 3.17 (br, 1H, -OH), 2.14 (s, 3H, -CH3), 2.05 (s, 3H, -CH3), 2.02 (s, 3H, -CH3), 2.00 (s, 3H, -CH3), 1.87 (s, 3H, -CH3), 1.85 (s, 3H, -CH3); 13C NMR (150 MHz, CDCl3): d 171.1, 171.0, 170.4, 170.0, 169.9, 168.8, 167.9, 165.8, 165.2, 161.7, 142.9, 133.4, 133.3, 129.9, 129.7, 129.3, 129.1, 128.4, 128.4, 125.8, 116.9, 99.1, 98.9, 74.0, 73.9, 73.0, 71.1, 70.6, 69.2, 68.7, 67.2, 66.5, 63.0, 62.5, 53.0, 48.5, 23.0, 20.8, 20.7, 20.6, 20.6; HRMS (ESI-TOF) m/e : Calcd for C48H53N2O24 [M+H]+: 1041.2983 found 1041.2976.
Figure imgf000050_0001
p-Nitrophenyl [5-acetamido-5-deoxy-D-erythro-a-L-gluco-non-2- ulopyranosonate]-(2®6)- b-D-galactopyranoside S27. To a solution of compound S26 (75 mg, 0.072 mmol, 1equiv.) in methanol (5 mL) was added LiOH·H2O (30 mg, 0.72 mmol, 10 equiv.) in water (1 mL). After stirring for 16 h at room temperature, the reaction mixture was neutralized with IR-120, filtered, and concentrated. The obtained residue was purified by (BIO-RAD) Biogel P-2 column chromatography using water as eluent to give compound S27 (41 mg, 94%). 1H NMR (600 MHz, D2O): d 8.29-8.28 (m, 2H, Ar-H), 7.28-7.27 (m, 2H, Ar- H), 5.20 (d, J = 7.2 Hz, C1-Hb), 4.09-4.06 (m, 2H), 4.01 (dd, J = 10.8, 7.8 Hz, 1H), 3.92-3.79 (m, 6H), 3.71 (d, J = 10.8 Hz, 1H), 3.64-3.60 (m, 2H), 3.53 (d, J = 9.6 Hz, 1H), 3.49 (d, J = 9.6 Hz, 1H), 2.02 (s, 3H, -CH3); 13C NMR (150 MHz, D2O): d 174.8, 173.0, 161.9, 142.5, 126.1, 116.4, 99.9, 98.1, 76.1, 73.9, 73.5, 72.4, 72.2, 71.5, 70.3, 68.4, 68.0, 63.0, 62.6, 50.7, 21.9; HRMS (ESI-TOF) m/e : Calcd for C23H33N2O17 [M+H]+: 609.1774 found 609.1774.
Figure imgf000051_0001
p-Nitrophenyl [5-acetamido-5-deoxy-D-glycero-a-D-galacto-non-2- ulopyranosylonate]-(2®6)-b-D-galactopyranoside 1. Neu5Ac-a2,6-Gal-pNP: Neu5Ac- a2,6-Gal-pNP was synthesized by mixing pNP-b-Gal (1.0 mmol), sialic acid (1.2 mmol), cytidine triphosphate (1.2 mmol), CMP-sialic acid synthetases (CSS, 12 U), pyrophosphatase (PPA, 1U) and a-2,6-sialyltransferase (SiaT, 15U) in 15 mL Tris buffer (pH 7.0) with 5 mM MgCl2 and 5 mM MnCl2. After removal of the proteins by heating and centrifugation, the product was purified by (BIO-RAD) Biogel P-2 column chromatography using water as eluent. The fractions containing Neu5Ac-a2,6-Gal-pNP were collected, and lyophilized to give compound 1 (50%).1H NMR (600 MHz, D2O): d 8.33-8.32 (m, 2H, Ar-H), 7.31-7.29 (m, 2H, Ar-H), 5.23 (d, J = 7.8 Hz, C1-Hb), 4.06-4.04 (m, 2H), 3.99 (dd, J = 10.2, 8.4 Hz, 1H), 3.90-3.86 (m, 3H), 3.83 (dd, J = 10.2, 3.6 Hz, 1H), 3.80-3.76 (m, 1H), 3.73-3.69(m, 3H), 3.65-3.62 (m, 2H), 3.57 (d, J = 8.4 Hz, 1H), 2.79 (dd, J = 12.6, 4.8 Hz, 1H), 2.04 (s, 3H, -CH3), 1.68 (dd, J = 12.6, 12.0 Hz, 1H); 13C NMR (150 MHz, D2O): d 174.6, 173.1, 161.4, 142.1, 125.7, 116.0, 99.8, 99.4, 73.6, 72.1, 71.9, 71.3, 69.8, 68.0, 67.7, 67.7, 62.5, 62.2, 51.4, 39.8, 21.6; HRMS (ESI-TOF) m/e : Calcd for C23H33N2O16 [M+H]+: 593.1825 found 593.1825. EXAMPLE 2: Stability Against Sialidase-Catalyzed Hydrolysis and Analysis of Sialidase
Inhibition31
Materials:
b-Galactosidase of Aspergillus oryzae (G5160) and sialidases from Vibrio cholerae (11080725001) and Clostridium perfringens (11585886001) were recived from Sigma Aldrich.
Enzymatic Assays for Sialidases:
The assays were carried out at 37 oC in duplicates in 96-well plates in a final volume of 50 µL containing a substrate (0-20 mM), and b-galactosidase (100 mU). The assay conditions for the two sialidases were as follows: C. perfringens (1 mU), sodium acetate buffer (50 mM) pH 5.0 and CaCl2 (10 mM); V. cholerae (2 mU), sodium acetate buffer (50 mM) pH 5.5, CaCl2 (10 mM) and NaCl (150 mM). The reactions were carried out for 40 min to 2 hrs for C. perfringens and overnight for V. cholerae. The assays were stopped by adding 65 µL of CAPS buffer (N-cyclohexyl-3-aminopropane sulfonic acid, 0.5 M, pH 10.5). The amount of the para-nitrophenolate formed was determined by measuring the A405nm of the reaction mixtures using a microplate reader. Three compounds (Neu5Ac-a2,6-GalbpNP, 3Fax-Neu5Ac-a2,6-GalbpNP and 3OHeq-Neu5Ac-a2,6-GalbpNP) were tested as substrates for the enzymes. All three compounds have the background absorbance of A405nm at 20 mM after incubation for 1 hr at 37 oC in the absence of sialidase. The absorbance of the three compounds Neu5Ac-a2,6-GalbpNP, 3Fax-Neu5Ac-a2,6-GalbpNP and 3OHeq-Neu5Ac-a2,6- GalbpNP were 0.044, 0.129 and 0.072, respectively. The standard curve of pNP was determined by series two-fold dilution of 0.35 mM of pNP, then graphing the A405nm against the concentration of pNP resulted in the standard curve of pNP.
Inhibition Assays for Sialidases:
The assays were carried out at 37 oC in duplicates in 96-well plates in a final volume of 50 µL containing the substrate Neu5Ac-a2,6-GalbpNP (0.6 mM), b-galactosidase (100 mU), and sialidase in the absence or presence of an inhibitor at varied concentrations (0-20 mM). Reactions were allowed to proceed for 40 min to 2 hrs for C. perfringens and overnight for V. cholera. The assays were stopped by adding CAPS buffer (65 uL, 0.5 M, pH 10.5). The amount of the para-nitrophenolate formed was determined by measuring the A405nm of the reaction mixture using a microplate reader (FIG.1). EXAMPLE 3: Preparation of Homogeneous mAb Modified with 3Fax-Neu5Ac and Neu5Ac to Study the Effect on Binding to FcgRIIIa by Surface Plasmon Resonance (SPR) Analysis
Expression of Enzymes:
The endo-glycosidases Endo-S, Endo-S2, Endo-S2 mutant (D184Q), and the a-L- fucosidase from Bacteroides fragilis NCTC 9343 were expressed in Escherichia coli and the purification of enzymes was performed using Ni-NTA agarose beads.
Preparation of mono-GlcNAc-Rituximab:
As described previously,32 Rituximab (3.0 mg; Rituxan® Roche) in a Tris-HCl buffer (50 mM, pH 7.4, 1.5 mL) was incubated with Endo-S (120 mg), Endo-S2 (240 mg) and BfFucH (4.5 mg) at 37 °C for 24 h. LC-MS and SDS-PAGE analyses indicated the complete cleavage of the N-glycans on the heavy chain. The reaction mixture was subjected to affinity chromatography on a column of protein A-agarose resin (1 mL; GE Healthcare) pre- equilibrated with a Tris-HCl buffer (50 mM, pH 7.4). Then, the column was washed with a Tris-HCl buffer (50 mM, pH 7.4, 20 mL). The bound IgG was released with glycine-HCl (100 mM, pH 3.0, 10 mL), and the elution fractions were immediately neutralized with Tris- HCl buffer (1.0 M, pH 8.3). The fractions containing the antibody were combined and concentrated by centrifugal filtration (Amicon Ultra centrifugal filter, Millipore, Billerica, MA) to give mono-GlcNAc Rituximab (2.4 mg). The product was trypsinized, and the glycopeptides, TKPREEQYNSTYR (m/z=1391.58) and EEQYNSTYR (m/z=1873.88) were analyzed using nanospray LC/MS to confirm the glycosylation pattern of mono-GlcNAc. Transglycosylation of mono-GlcNAc Rituximab with glycan oxazolines:
A glycan oxazoline was added to the mixture of an Endo-S2 D184Q and Mono- GlcNAc Rituximab in 50 mM Tris buffer (pH 7.4). The solution was incubated for 30 min at 37 oC. Then, the reaction mixture was purified with protein-A affinity column, followed by an anion exchange column of Capto Q (GE Healthcare) to collect the desired product.
SDS-PAGE detection of glycoengineered Herceptin antibodies:
All the SDS–PAGE analyses were performed with NuPAGE® Novex® 4–12% Bis- Tris gel (Invitrogen) in MOPS buffer with 2-mercaptoethanol present in samples (FIG.2). MS spectrometry analysis of glycoengineered mAb:
For the analysis of trypsinized glycopeptides, high resolution and high mass accuracy nanoflow LC-MS/MS experiments were performed on a LTQFT Ultra (linear quadrupole ion trap Fourier transform ion cyclotron resonance) mass spectrometer (Thermo Electron, San Jose, CA) equipped with a nanoelectrospry ion source (New Objective, Inc.), an Agilent 1100 Series binary high-performance liquid chromatography pump (Agilent Technologies, Palo Alto, CA), and a Famos autosampler (LC Packings, San Francisco, CA). The digestion solution (6 mL) was injected at the 10 mL/min flow rate to a self-packed precolumn (150 mm I.D. x 20 mm, 5 mm, 100 Å). The chromatographic separation was performed on a self- packed reversed phase C18 nano-column (75 mm I.D. x 300 mm, 5 mm, 100 Å) using 0.1% formic acid in water as a mobile phase A and 0.1% formic acid in 80% acetonitrile as mobile phase B operated at 300 nL/min flow rate. Survey of full-scan MS conditions: mass range m/z 320-2000, resolution 100,000 at m/z 400. The ten most intense ions were sequentially isolated for MS2 by LTQ. Electrospray voltage was maintained at 1.8 kV and the capillary temperature was set at 200 oC (FIG.3 and Table 3).
Surface Plasmon Resonance (SPR) Analysis All the SPR experiments were performed with the single cycle kinetic method by BIACORE T200 at 25 °C using HBS-EP (10mM HEPES pH7.4, 0.15M NaCl, 3mMEDTA, 0.005% surfactant P20) as running buffer. FcgRIIIa was transfected into HEK-293 cells to express the complex-type glycosylated recombinant protein as analyte. For the analysis of Rituximabs binding to FcgRIIIa receptor, antihuman Fab antibodies in human Fab capture kit (GE Healthcare) were immobilized onto both the reference and active channels of CM5 sensor chip, and then Rituximabs were captured on the active channel for interacting with the serial dilutions of FcgRIIIa analyte (2.5, 5, 10, 20, 40nM for 2,6-FluoSCT and 2,6-SCT; 8, 24, 72, 216, 648 nM for the commercial Rituximabs) at 30 ml/min for association of 240 seconds followed by dissociation time of 420 seconds. Rituximab data were processed with double referencing for background subtraction. Data of Rituximabs was fitted to 1:1 Langmuir binding model in BiaEvaluation software (GE Healthcare) to obtain the kinetic/affinity constants (Table 4). Analyzed antibodies were captured by the Human Fab capture kit and detected with the single cycle kinetic method.
Figure imgf000054_0001
EXAMPLE 4: Relative Reactivity Values (RRV) of Compounds 4 and 18
The RRVs were measured in triplicates by following the experimental procedure reported previously.34 The RRV (2053) of disaccharide donor 4 was measured against a competition reference donor S3423 (RRV = 1791). The RRV (537) of disaccharide donor 18 was measured against a competition reference donor S23 (RRV = 286).
Figure imgf000055_0001
OTHER EMBODIMENTS
All of the features disclosed in this specification may be combined in any combination. Each feature disclosed in this specification may be replaced by an alternative feature serving the same, equivalent, or similar purpose. Thus, unless expressly stated otherwise, each feature disclosed is only an example of a generic series of equivalent or similar features.
Further, from the above description, one skilled in the art can easily ascertain the essential characteristics of the present invention, and without departing from the spirit and scope thereof, can make various changes and modifications of the invention to adapt it to various usages and conditions. Thus, other embodiments are also within the claims. REFERENCES:
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Claims

WHAT IS CLAIMED IS: 1. A method of preparing a saccharide containing a 3-fluoro-sialic acid, the method comprising:
conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside; and
conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid.
2. The method of claim 1, wherein the saccharide is a monosaccharide.
3. The method of claim 2, wherein the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxy-sialic acid, and the glycosylation reaction is conducted in the presence of silver trifluoromethanesulfonate (AgOTf) and disodium phosphate (Na2HPO4).
4. The method of claim 3, wherein the glycosylation reaction is conducted in toluene.
5. The method of claim 2, wherein the fluorinating agent is perfluoro-1- butanesulfonyl fluoride (NfF), and the fluorination reaction is conducted in the presence of a catalyst.
6. The method of claim 5, wherein the catalyst is 1,8-diazabicyclo[5,4,0]-undec- 7-ene (DBU).
7. The method of claim 6, wherein the fluorination reaction is conducted in toluene.
8. The method of claim 6, wherein the fluorination reaction is conducted further in the presence of tris(dimethylamino)sulfonium difluorotrimethylsilicate (TASF).
9. The method of claim 2, wherein the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxy-sialic acid, the fluorinating agent is NfF, the glycosylation reaction is conducted in the presence of AgOTf and Na2HPO4, and the fluorination reaction is conducted in the presence of a catalyst.
10. The method of claim 9, wherein the catalyst is DBU and each of the glycosylation and fluorination reactions is conducted in toluene.
11. The method of claim 10, wherein the 3-hydroxy-sialic acid is of formula (I):
Figure imgf000062_0001
the saccharide is a compound of formula (II):
Figure imgf000062_0002
the a2,6-linked 3-hydroxy-sialoside is a compound of formula (III):
Figure imgf000062_0003
and
the saccharide containing a 3-fluoro-sialic acid is a compound of formula (IV):
Figure imgf000062_0004
12. The method of claim 11, wherein the fluorination reaction is conducted further in the presence of TASF.
13. The method of claim 2, further comprising conducting another glycosylation reaction by reacting the saccharide containing a 3-fluoro-sialic acid with a second saccharide.
14. The method of claim 13, wherein the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxysialic acid, the fluorinating agent is NfF, the glycosylation reaction is conducted in the presence of AgOTf and Na2HPO4, and the fluorination reaction is conducted in the presence of a catalyst. 15. The method of claim 14, wherein the catalyst is DBU and each of the glycosylation and fluorination reactions is conducted in toluene. 16. The method of claim 15, wherein the fluorination reaction is conducted further in the presence of TASF. 17. A method of preparing a homogeneous antibody bonded to a saccharide containing a 3-fluoro-sialic acid, the method comprising glycosylating a monoclonal antibody with a saccharide containing a 3-fluoro-sialic acid. 18. The method of claim 17, wherein the saccharide containing a 3-fluoro-sialic acid is obtained by:
conducting a glycosylation reaction by reacting a 3-hydroxy-sialic acid with a saccharide to form an a2,6-linked 3-hydroxy-sialoside; and
conducting a fluorination reaction by reacting the a2,6-linked 3-hydroxy-sialoside with a fluorinating agent to form a saccharide containing a 3-fluoro-sialic acid. 19. The method of claim 18, wherein the 3-hydroxy-sialic acid is a 2-bromo-3- hydroxy-sialic acid, the fluorinating agent is NfF, the glycosylation reaction is conducted in the presence of AgOTf and Na2HPO4, and the fluorination reaction is conducted in the presence of a catalyst. 20. The method of claim 19, wherein the catalyst is DBU and each of the glycosylation and fluorination reactions is conducted in toluene. 21. The method of claim 20, wherein
the 3-hydroxy-sialic acid is of formula (I):
Figure imgf000064_0001
the saccharide is of formula (II):
Figure imgf000064_0002
the a2,6-linked 3-hydroxy-sialoside is of formula (III):
Figure imgf000064_0003
and
the saccharide containing a 3-fluoro-sialic acid is of formula (IV):
Figure imgf000064_0004
22. The method of claim 21, further comprising after the fluorination reaction, conducting another glycosylation reaction by reacting the saccharide containing a 3-fluoro- sialic acid with a second saccharide.
23. The method of claim 17, wherein the saccharide containing a 3-fluoro-sialic acid is an a2,6-linked 3-fluoro-sialoside terminated N-glycan.
24. The method of claim 23, wherein the a2,6-linked 3-fluoro-sialoside terminated N-glycan is of formula (V):
Figure imgf000065_0001
,
wherein Z is
Figure imgf000065_0002
25. A compound of formula (VI):
Figure imgf000065_0003
wherein R1 is Ac or H, R2 is Bz or H, R3 is methyl or H, R4 is Bn or H, and X is OH, a leaving group, or a saccharide.
26. The compound of claim 25, wherein the compound is of formula (IV):
Figure imgf000065_0004
27. The compound of claim 25, wherein X is an N-glycan.
28. The compound of claim 27, wherein the compound is of formula (V):
Figure imgf000066_0001
wherein Z is
Figure imgf000066_0002
29. A monoclonal antibody bonded to a saccharide containing a 3-fluoro-sialic acid, wherein the saccharide containing a 3-fluoro-sialic acid is compound of claim 27.
30. The monoclonal antibody of claim 29, wherein the saccharide containing a 3- fluoro-sialic acid is compound of claim 28.
31. A method of treating a cancer, which comprises administering to a subject in need thereof an effective amount of a monoclonal antibody of claim 29.
32. The method of claim 31, wherein the monoclonal antibody is a monoclonal antibody of claim 30.
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