WO2018188672A1 - Sialidase gene recombinant expression vector and construction method therefor, and sialidase and preparation method therefor - Google Patents

Sialidase gene recombinant expression vector and construction method therefor, and sialidase and preparation method therefor Download PDF

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WO2018188672A1
WO2018188672A1 PCT/CN2018/085049 CN2018085049W WO2018188672A1 WO 2018188672 A1 WO2018188672 A1 WO 2018188672A1 CN 2018085049 W CN2018085049 W CN 2018085049W WO 2018188672 A1 WO2018188672 A1 WO 2018188672A1
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sialidase
expression vector
recombinant expression
sialidase gene
gene fragment
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Chinese (zh)
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王少露
贺丽生
王勇
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中国科学院深海科学与工程研究所
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/70Vectors or expression systems specially adapted for E. coli
    • CCHEMISTRY; METALLURGY
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/66General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/24Hydrolases (3) acting on glycosyl compounds (3.2)
    • C12N9/2402Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y302/00Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
    • C12Y302/01Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
    • C12Y302/01018Exo-alpha-sialidase (3.2.1.18), i.e. trans-sialidase

Definitions

  • the invention relates to the technical field of an expression vector construction method, in particular to a sialidase gene recombinant expression vector and a construction method thereof, a sialidase and a preparation method thereof.
  • Sialic acid is a kind of acidic amino sugar containing 9 carbon atoms and having a pyranose structure. It is widely found in animal tissues and microorganisms and is an important component of cell membrane glycoproteins and glycolipids. Sialic acid generally does not exist in a free form. It usually combines with biomacromolecules such as glycoproteins and glycolipids on the cell surface to form a conjugate, and is present at the end of the conjugate, in cell differentiation, maturation, cells and organisms. It plays an important role in physiological and biochemical processes such as intermolecular interactions. More than 50 different structures of sialic acid have been found in nature.
  • the most important sialic acid is N-acetylneuraminic acid (Neu5Ac), which is one of the most important members of the sialic acid family. More than 99% of the sialic acid family, usually a precursor of biosynthesis of other members of the sialic acid family, has diverse biological functions. Sialic acid plays an important role in the physiological processes involved in the interaction of sugars and proteins, such as cell adhesion, signal transduction, glycoprotein stability, bacterial pathogenesis, viral infection, inflammation, and tumor metastasis. Wait.
  • N-acetylneuraminic acid Since the content of N-acetylneuraminic acid accounts for more than 99% of the entire sialic acid family, it has been studied more deeply, and the production of N-acetylneuraminic acid (Neu5Ac) is generally obtained by the following methods: Methods from natural material extraction, chemical synthesis, enzymatic synthesis, and microbial fermentation. Enzymatic synthesis of N-acetylneuraminic acid begins with the discovery and application of sialidase or N-acetylneuraminic acid aldolase.
  • N-acetylneuraminic acid aldolase (NAL, EC 4.1.3.3), also known as N-acetylneuraminic lyase (Neu5Ac lyase), is a terminal enzyme of sialic acid metabolism that catalyzes sialic acid (Neu5Ac) Pyrolysis to form pyruvate and N-acetylmannosamine (ManNAc), under certain conditions can also condense N-acetylmannosamine (ManNAc) and pyruvate (Pyruvate) to form N-acetylneuraminic acid (Neu5Ac) It has been reported that the enzyme synthesizes sialic acid and its analogs.
  • Sialidase exists in animal tissues and some microorganisms. In animals, the main function of this enzyme is to control the circulation of sialic acid. In addition to regulating, microbes can not only decompose free sialic acid into available. The carbon and nitrogen sources also catalyze the synthesis of sialic acid. So far, sialidase studies on symbiotic microbial sources in deep-sea invertebrates have not been reported. Due to the special ecological environment (low temperature, high pressure and oligotrophy) in the deep sea and the lack of sampling techniques and tools, it is relatively difficult to capture organisms. Little is known about the study of sialidase from symbiotic microbial sources in deep-sea invertebrates, so little is known about the source of sialidase.
  • a method for constructing a sialidase gene recombinant expression vector comprises the following steps:
  • the sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
  • the positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector.
  • the method of preparing a sialidase gene fragment is as follows:
  • the sialidase gene fragment was obtained by polymerase chain reaction using the PowerLyzerR Powersoil DNA isolation kit as a template to extract the sialidase gene fragment; wherein the primers used in the polymerase chain reaction were as follows:
  • Primer F 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3';
  • Primer R 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3'.
  • the method before the step of cloning the sialidase gene fragment into pMD-18T, the method further comprises the steps of:
  • the sialidase gene fragment is detected by agarose gel electrophoresis, and after detection, it is purified and recovered by a gel recovery kit.
  • the method of joining the positive clone to the prokaryotic expression vector is as follows:
  • the positive clone and the prokaryotic expression vector were digested with BamHI and SalI, respectively, and the fragment was electrophoretically recovered and ligated with T4 ligase at 16 ° C for 2 h to obtain the sialidase gene recombinant expression vector.
  • the prokaryotic expression vector is a plasmid.
  • a method for preparing a sialidase comprising the steps of:
  • the sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, and the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
  • the positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector;
  • the obtained recombinant engineering bacteria are subjected to fermentation-induced expression and purification to obtain the sialidase.
  • the fermentation-induced expression in the step of fermentation-induced expression and purification of the obtained recombinant engineering bacteria is as follows:
  • the purification step is as follows:
  • the cells collected by centrifugation were washed twice with 1 ⁇ PBS, and the cells were collected by centrifugation, resuspended in 10 mL of lysis buffer containing 10 mmol of imidazole, sonicated, centrifuged to obtain a supernatant, and then the supernatant was transferred to a nickel column. Mix thoroughly to allow it to sink naturally, then rinse the protein with 40 mL of 60 mmol-80 mmol imidazole wash buffer, then elute the target protein with 4 mL of elution buffer containing 350 mmol-500 mmol of imidazole, and use a clean centrifuge tube. The protein of interest is collected to obtain the sialidase.
  • a sialidase gene recombinant expression vector prepared by the method for constructing the above sialidase gene recombinant expression vector.
  • a sialidase prepared by the preparation method of the above sialidase prepared by the preparation method of the above sialidase.
  • the preparation method of the above sialidase is carried out by extracting bacterial genomic DNA, PCR amplification, constructing a recombinant expression vector, transferring into a host cell, constructing a recombinant expression cell, culturing and inducing expression of the recombinant expression cell, and separating from the cultured host cell. Purification of proteases, analysis of protease enzymatic properties.
  • the preparation method of the above sialidase has obtained the gene sequence of sialidase, and the expression of sialidase has been purified, and the related enzymatic properties of sialidase have been analyzed.
  • the sialidase prepared by the above method for preparing sialidase is resistant to high temperature and Ph, and provides more basic materials and scientific basis for industrial and social applications.
  • Lane 1 is a schematic diagram showing the purification effect of SDS-PAGE according to an embodiment, wherein M is a marker, Lane 1 is an uninducer control; 2 is an unpurified induced expression protein; 3 and 4 are purified proteins;
  • Figure 2 is a temperature influence diagram of a sialidase catalytic reaction
  • Figure 3 is a graph of the pH effect of a sialidase catalytic reaction.
  • the method for constructing a sialidase gene recombinant expression vector comprises the following steps:
  • the sialidase gene fragment is prepared by cloning the nucleotide sequence of the sialidase gene (NanA) from the gastrointestinal tract of the genus.
  • the sialidase gene fragment was obtained by polymerase chain reaction using the PowerLyzerR Powersoil DNA isolation kit to extract the genomic DNA of the gastrointestinal tract microbial bacterium.
  • the primers used in the polymerase chain reaction are as follows:
  • Primer F 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3';
  • Primer R 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3'.
  • primer F contains a BamHI restriction site (1st base to 6th base), and the 5' end of primer R contains a SalI restriction site (1st base to 6th base) ).
  • reaction conditions of the polymerase chain reaction are as follows:
  • the PCR amplification conditions are as follows:
  • the sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
  • pMD-18T was purchased from TaKaRa.
  • the sialidase gene fragment was detected by agarose gel electrophoresis, and after detection, it was purified by a gel recovery kit. The results of agarose gel electrophoresis showed that a fragment of about 885 bp in size was obtained.
  • the method for sequencing the cloning product selection positive clones is:
  • the ligation product was transformed into Escherichia coli JM109, cultured on an LB solid plate containing ampicillin at a concentration of 100 ⁇ g/mL, and white colonies grown on the plate were picked, and positive clones were verified by colony PCR, and clones which were verified to be positive were ligated.
  • the LB liquid medium containing ampicillin at a concentration of 100 ⁇ g/mL was cultured overnight at 37 ° C, and the plasmid was extracted by a spin column type plasmid extraction kit and sequenced (Hua Da Company). The sequencing result showed that the fragment size was 885 bp. As shown in SEQ ID NO: 1.
  • the method of ligating a positive clone to a prokaryotic expression vector is as follows:
  • the positive clone and the prokaryotic expression vector were digested with BamHI and SalI, respectively, and the restriction fragment was electrophoresed and ligated with T4 ligase at 16 ° C for 2 h to obtain a sialidase gene recombinant expression vector.
  • the prokaryotic expression vector is a plasmid or other vector.
  • the prokaryotic expression vector is a pET vector series or other prokaryotic expression vector. More preferably, the prokaryotic expression vector is pET-30a.
  • the nucleotide sequence encoding the sialidase can be operably linked to an appropriate promoter in an expression vector to direct the synthesis of the mRNA.
  • promoters are: lac or trp promoter of E. coli, PL promoter of lambda phage, CMV early promoter of eukaryotic promoter and other known controllable genes in prokaryotic or eukaryotic cells Or a promoter expressed in the virus.
  • the expression vector also includes a ribosome binding site for translation initiation, a transcription terminator, and the like.
  • the method for constructing the above sialidase gene recombinant expression vector is simple and easy to operate by extracting bacterial genomic DNA, PCR amplification, and constructing a recombinant expression vector.
  • the method for transforming the sialidase gene recombinant expression vector is as follows:
  • the product was transformed into host cells, cultured on LB solid plate containing 100 ⁇ g/mL ampicillin, white colonies grown on the plate were picked, and positive clones were screened by colony PCR and plasmid extraction and double restriction enzyme digestion and identified by sequencing. , obtained recombinant engineering bacteria. That is, an E. coli host cell containing a sialidase gene was successfully constructed.
  • the host cell may be Escherichia coli, fungal cell or yeast or the like.
  • the host cell is Escherichia coli BL21 (DE3).
  • IPTG isopropyl- ⁇ -D-Thiogalactoside
  • the cells collected by centrifugation were washed twice with 1 ⁇ PBS, and the cells were collected by centrifugation, resuspended in 10 mL of lysis buffer containing 10 mmol of imidazole, sonicated, centrifuged to obtain a supernatant, and then the supernatant was transferred to a nickel column and thoroughly mixed. Allow to stand naturally to sink, then rinse the protein with 40 mL of washing buffer containing 60 mmol-80 mmol of imidazole, then elute the target protein with 4 mL of elution buffer containing 350 mmol-500 mmol of imidazole, and collect it with a clean centrifuge tube. Protein, resulting in purified sialidase.
  • the lysis buffer includes the following components: NaH2PO4 50 mM, NaCl 300 mM, and imidazole 10 mM.
  • the wash buffer included the following components: NaH2PO4 50 mM, NaCl 300 mM, imidazole 60-80 mM.
  • the elution buffer included the following components: NaH2PO4 50 mM, NaCl 300 mM, imidazole 350-500 mM.
  • the protein solution is purified on a nickel column, and the nickel sulfate in the nickel column can be bound to a protein labeled with histidine (Hisidine, His) or combined with imidazole.
  • Histidine histidine
  • the purified sialidase was subjected to enzyme activity measurement and related enzymatic properties, and the results are shown in Fig. 2 and Fig. 3.
  • sialidase gene recombinant expression vector obtained by the method for constructing the above-described sialidase gene recombinant expression vector is also provided.
  • sialidase prepared by the above-described preparation method of sialidase is also provided.
  • the preparation method of the above sialidase is carried out by extracting bacterial genomic DNA, PCR amplification, constructing a recombinant expression vector, transferring into a host cell, constructing a recombinant expression cell, culturing and inducing expression of the recombinant expression cell, and separating from the cultured host cell. Purification of proteases, analysis of protease enzymatic properties.
  • the preparation method of the above sialidase has obtained the gene sequence of sialidase, and the expression of sialidase has been purified, and the related enzymatic properties of sialidase have been analyzed.
  • the sialidase prepared by the above method for preparing sialidase is resistant to high temperature and Ph, and provides more basic materials and scientific basis for industrial and social applications.
  • the sialidase gene is cloned and expressed from the symbiotic microbial mycoplasma of the deep-sea invertebrate genus, and the enzymatic properties of the enzyme are important. It helps to analyze and interpret the survival and adaptation mechanisms of deep-sea living organisms in extreme environments, facilitates the development and utilization of deep-sea biological germplasm resources and natural products, and provides a basis for expanding the industrial production of microbial-derived sialidase and sialic acid. Material and scientific basis, providing new ideas and methods for improving microbial metabolic products, has important practical significance and good application prospects.
  • Example 1 The nucleotide sequence of the sialidase gene (NanA) was cloned from the gastrointestinal tract of the footworm.
  • the PowerLyzerR Powersoil DNA isolation kit was used to extract the genomic DNA of the gastrointestinal tract of the genus Apothecary, and 1 ⁇ L was used as a template for polymerase chain reaction (PCR), and the primers (primer F and primer R) were designed in combination with the primers used in the PCR reaction.
  • PCR polymerase chain reaction
  • primers primer F and primer R
  • PCR reaction system 10 ⁇ L of 5 ⁇ Buffer, 4 ⁇ L of dNTP, 0.5 ⁇ L of PrimeSTAR HS DNA Polymerase, 1 ⁇ L of primer F, 1 ⁇ L of primer R, 1 ⁇ L of template, 32.5 ⁇ L of H 2 O, and a total volume of 50 ⁇ L.
  • the PCR amplification conditions are as follows:
  • the ligation product was transformed into Escherichia coli JM109, cultured on an LB solid plate containing 100 ⁇ g/mL ampicillin, white colonies grown on the plate were picked, positive clones were verified by colony PCR, and clones verified to be positive were ligated.
  • the medium was cultured in an LB liquid medium containing 100 ⁇ g/mL ampicillin, and cultured at 37 ° C overnight.
  • the plasmid was extracted by a plasmid extraction kit (centrifugal column type) and sequenced (Hua Da Company). The sequencing result showed that the fragment size was 885 bp, such as SEQ. ID NO: 1 is shown.
  • the fragment amplified in Example 1 has a BamHI restriction site (1st base to 6th base) at the 5' end of the primer F, and a SalI restriction site at the 5' end of the primer R (1st base to 6th base), so the fragments were double-digested with these two enzymes, and pET-30a was digested with the same enzyme, and the digested fragments were electrophoresed and linked with T4.
  • the enzyme was ligated at 16 ° C for 2 h to construct a recombinant expression vector.
  • the ligation product was transformed into E.
  • E. coli host cells containing the sialidase gene were successfully constructed.
  • the recombinant engineering bacteria obtained in Example 2 were inoculated into 10 mL of LB liquid medium (containing 100 ⁇ g/mL ampicillin), cultured at 37 ° C, 150 rpm overnight, and the whole day was transferred to 250 mL of fresh LB liquid culture.
  • LB liquid medium containing 100 ⁇ g/mL ampicillin
  • the nickel sulfate in the nickel column can be combined with a protein having a His (histidine) tag, or can be combined with an imidazole.
  • the protein solution is first passed through a nickel column at a certain speed to hang the protein, and then Elution was carried out with different concentrations of imidazole buffer. The above supernatant was transferred to a nickel column and thoroughly mixed to allow it to naturally sink. Then, the heteroprotein was washed with 40 mL of a washing buffer containing 60 mmol-80 mmol of imidazole, and washed with 4 mL of an elution buffer containing 350 mmol-500 mmol of imidazole.
  • the target protein was separately collected by a clean centrifuge tube, and the eluate was detected by SDS polyacrylamide gel electrophoresis (SDS-PAGE). The purification effect is shown in FIG.
  • the purified protease solution was loaded into a dialysis bag, dialyzed against dialysis solution (PBS) at 4 ° C for 24 h, and the solution was changed two to three times.
  • the dialyzed protein was placed in a concentrating tube and concentrated appropriately. A small amount of the concentrated sample was subjected to SDS-PAGE analysis, and the protein concentration was estimated based on the BSA concentration standard curve.
  • the purified protein is subjected to enzyme activity assay and related enzymatic properties.
  • the enzyme catalyzes the cleavage direction with N-acetylneuraminic acid (Neu5Ac) as a substrate, and the activity in the direction of cleavage
  • the method of enzymatic coupling is determined by a spectrophotometer.
  • the principle is that pyruvic acid produced by the cleavage of N-acetylneuraminic acid can be reduced to lactic acid in the presence of NADH and lactate dehydrogenase, and NADH is consumed in the process. A decrease in the absorbance of NADH at a wavelength of 340 nm is caused.
  • One enzyme activity unit is defined as the amount of enzyme required to cleave 1 ⁇ mol of Neu5Ac to produce 1 ⁇ mol of N-acetyl-D-mannosamine and pyruvate at pH 7.0, 37 ° C for 1 min.
  • the reaction system included 4 mmol/L Neu5Ac, 150 umol/L NADH, 0.5 U LDH, 1.5 ug enzyme.
  • the enzyme-catalyzed synthesis direction uses N-acetylmannosamine (ManNAc) and pyruvate (Pyr) as substrates, and the synthesis direction activity is determined by HPLC. The principle is: only ManNAc, Pyr and enzyme are added, and the Neu5Ac is detected by HPLC.
  • the amount of generation determines the amount of vitality.
  • One enzyme activity unit is defined as the amount of enzyme required to synthesize 1 ⁇ mol of Neu5Ac in 1 min at p H 7.0, 37 °C.
  • the reaction system included 30 mmol/L ManNAc, 100 mmol/L Pyr and 20 ⁇ g enzyme. The results of the enzyme activity test are shown in Figures 2 and 3.

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Abstract

Provided is a preparation method for sialidase, comprising the following steps: preparing a sialidase gene fragment; cloning the sialidase gene fragment to pMD-18T to obtain a connection product, converting the connection product into E.coli JM109, and selecting a positive clone for sequencing to obtain a gene sequence as shown in SEQ ID NO: 1; connecting the positive clone and a prokaryotic expression vector to obtain a recombinant expression vector; converting the recombinant expression vector to obtain recombinant engineering bacteria; performing fermentation, induced expression and purification on the recombinant engineering bacteria to obtain the sialidase. Also provided is a preparation method for the sialidase, comprising bacterial genome DNA extraction, PCR amplification, construction of the recombinant expression vector, conversion of the recombinant expression vector into host cells for construction of recombinant expression cells, culture and induced expression of the recombinant expression cells, isolation and purification of protease from the cultured host cells, and analysis of protease enzymatic properties.

Description

唾液酸酶基因重组表达载体及其构建方法,唾液酸酶及其制备方法Sialylase gene recombinant expression vector and construction method thereof, sialidase and preparation method thereof 技术领域Technical field
本发明涉及表达载体构建方法技术领域,尤其涉及一种唾液酸酶基因重组表达载体及其构建方法,唾液酸酶及其制备方法。The invention relates to the technical field of an expression vector construction method, in particular to a sialidase gene recombinant expression vector and a construction method thereof, a sialidase and a preparation method thereof.
背景技术Background technique
唾液酸是一类含9个碳原子并具有吡喃糖结构的酸性氨基糖,广泛存在于动物组织及微生物中,是细胞膜糖蛋白和糖脂的重要组成部分。唾液酸一般不以游离态的形式存在,它通常与细胞表面的糖蛋白和糖脂等生物大分子结合形成缀合物,并存在于缀合物的末端,在细胞的分化、成熟、细胞与生物大分子间相互作用等生理生化过程中起重要作用。在自然界中已发现五十余种结构不同的唾液酸,其中最为重要研究最多的唾液酸是N-乙酰神经氨酸(Neu5Ac),它是唾液酸家族中最主要的成员之一,含量占整个唾液酸家族的99%以上,通常是唾液酸家族其他成员生物合成的前体,具有多样的生物学功能。唾液酸在糖和蛋白相互作用有关的生理过程中起着很重要的作用,例如:细胞的粘附、信号传递、糖蛋白的稳定性、细菌致病性、病毒侵染、炎症和肿瘤的转移等。由于N-乙酰神经氨酸的含量占整个唾液酸家族的99%以上,因此人们对它的研究也较为深入,而对N-乙酰神经氨酸(Neu5Ac)的生产一般有以下几种方法获得:从天然材料提取、化学合成、酶法合成以及微生物发酵等方法。酶法合成N-乙酰神经氨酸起始于唾液酸酶或N-乙酰神经氨酸醛缩酶的发现和应用。N-乙酰神经氨酸醛缩酶(NAL,EC 4.1.3.3)又称为N-乙酰神经氨酸裂合酶(Neu5Ac lyase),它是唾液酸代谢的终端酶,既能催化唾液酸(Neu5Ac)裂解形成丙酮酸(Pyruvate)和N-乙酰甘露糖胺(ManNAc),在一定条件下也能缩合N-乙酰甘露糖胺(ManNAc)和丙酮酸(Pyruvate)生成N-乙酰神经氨 酸(Neu5Ac),已有报道利用该酶合成唾液酸和它的类似物。唾液酸酶在动物组织及一些微生物中都有存在,动物体内,该酶主要作用是控制唾液酸的循环,微生物体内,除起到调控作用外,它不仅能把游离的唾液酸降解成可利用的碳源和氮源,还能催化唾液酸的合成。至今为止,对深海无脊椎动物共生微生物来源的唾液酸酶研究尚未见到报道,由于深海特殊的生态环境(低温、高压和寡营养等)及采样技术与工具的欠缺,捕获生物相对困难,促使对深海无脊椎动物共生微生物来源的唾液酸酶的研究报道非常有限,因此人们对该来源的唾液酸酶了解知之甚少。Sialic acid is a kind of acidic amino sugar containing 9 carbon atoms and having a pyranose structure. It is widely found in animal tissues and microorganisms and is an important component of cell membrane glycoproteins and glycolipids. Sialic acid generally does not exist in a free form. It usually combines with biomacromolecules such as glycoproteins and glycolipids on the cell surface to form a conjugate, and is present at the end of the conjugate, in cell differentiation, maturation, cells and organisms. It plays an important role in physiological and biochemical processes such as intermolecular interactions. More than 50 different structures of sialic acid have been found in nature. The most important sialic acid is N-acetylneuraminic acid (Neu5Ac), which is one of the most important members of the sialic acid family. More than 99% of the sialic acid family, usually a precursor of biosynthesis of other members of the sialic acid family, has diverse biological functions. Sialic acid plays an important role in the physiological processes involved in the interaction of sugars and proteins, such as cell adhesion, signal transduction, glycoprotein stability, bacterial pathogenesis, viral infection, inflammation, and tumor metastasis. Wait. Since the content of N-acetylneuraminic acid accounts for more than 99% of the entire sialic acid family, it has been studied more deeply, and the production of N-acetylneuraminic acid (Neu5Ac) is generally obtained by the following methods: Methods from natural material extraction, chemical synthesis, enzymatic synthesis, and microbial fermentation. Enzymatic synthesis of N-acetylneuraminic acid begins with the discovery and application of sialidase or N-acetylneuraminic acid aldolase. N-acetylneuraminic acid aldolase (NAL, EC 4.1.3.3), also known as N-acetylneuraminic lyase (Neu5Ac lyase), is a terminal enzyme of sialic acid metabolism that catalyzes sialic acid (Neu5Ac) Pyrolysis to form pyruvate and N-acetylmannosamine (ManNAc), under certain conditions can also condense N-acetylmannosamine (ManNAc) and pyruvate (Pyruvate) to form N-acetylneuraminic acid (Neu5Ac) It has been reported that the enzyme synthesizes sialic acid and its analogs. Sialidase exists in animal tissues and some microorganisms. In animals, the main function of this enzyme is to control the circulation of sialic acid. In addition to regulating, microbes can not only decompose free sialic acid into available. The carbon and nitrogen sources also catalyze the synthesis of sialic acid. So far, sialidase studies on symbiotic microbial sources in deep-sea invertebrates have not been reported. Due to the special ecological environment (low temperature, high pressure and oligotrophy) in the deep sea and the lack of sampling techniques and tools, it is relatively difficult to capture organisms. Little is known about the study of sialidase from symbiotic microbial sources in deep-sea invertebrates, so little is known about the source of sialidase.
发明内容Summary of the invention
鉴于此,有必要提供一种唾液酸酶基因重组表达载体及其构建方法,唾液酸酶及其制备方法。In view of this, it is necessary to provide a sialidase gene recombinant expression vector and a construction method thereof, a sialidase and a preparation method thereof.
一种唾液酸酶基因重组表达载体的构建方法,包括以下步骤:A method for constructing a sialidase gene recombinant expression vector comprises the following steps:
制备唾液酸酶基因片段;Preparing a sialidase gene fragment;
将所述唾液酸酶基因片段克隆到pMD-18T中,得到连接产物,将所述连接产物转化E.coli JM109,挑选阳性克隆子测序,获得如SEQ ID NO:1所示的基因序列;The sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
将所述阳性克隆子和原核表达载体连接,得到所述唾液酸酶基因重组表达载体。The positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector.
在其中一个实施例中,制备唾液酸酶基因片段的方法如下:In one embodiment, the method of preparing a sialidase gene fragment is as follows:
采用PowerLyzerR Powersoil DNA isolation kit提取大王具足虫肠胃微生物基因组DNA作为模板进行聚合酶链式反应,得到所述唾液酸酶基因片段;其中,聚合酶链式反应采用的引物如下:The sialidase gene fragment was obtained by polymerase chain reaction using the PowerLyzerR Powersoil DNA isolation kit as a template to extract the sialidase gene fragment; wherein the primers used in the polymerase chain reaction were as follows:
引物F:5’-GGATCCATGGAAAAATTAACAGGAATTTTTG-3’;Primer F: 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3';
引物R:5’-GTCGACTTATGAAAGATATTTATCAATTATGTT-3’。Primer R: 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3'.
在其中一个实施例中,将所述唾液酸酶基因片段克隆到pMD-18T中的步骤前,还包括如下步骤:In one embodiment, before the step of cloning the sialidase gene fragment into pMD-18T, the method further comprises the steps of:
将所述唾液酸酶基因片段用琼脂糖凝胶电泳检测,检测后用胶回收试剂盒进行纯化回收。The sialidase gene fragment is detected by agarose gel electrophoresis, and after detection, it is purified and recovered by a gel recovery kit.
在其中一个实施例中,将所述阳性克隆子和原核表达载体连接的方法如下:In one embodiment, the method of joining the positive clone to the prokaryotic expression vector is as follows:
将所述阳性克隆子和原核表达载体分别经BamHI和SalI双酶切后,电泳回收酶切片段,并用T4连接酶在16℃连接2h,得到所述唾液酸酶基因重组表达载体。The positive clone and the prokaryotic expression vector were digested with BamHI and SalI, respectively, and the fragment was electrophoretically recovered and ligated with T4 ligase at 16 ° C for 2 h to obtain the sialidase gene recombinant expression vector.
在其中一个实施例中,所述原核表达载体为质粒。In one embodiment, the prokaryotic expression vector is a plasmid.
一种唾液酸酶的制备方法,包括如下步骤:A method for preparing a sialidase, comprising the steps of:
制备唾液酸酶基因片段;Preparing a sialidase gene fragment;
将所述唾液酸酶基因片段克隆到pMD-18T中,得到连接产物,将连接产物转化E.coli JM109,挑选阳性克隆子测序,获得如SEQ ID NO:1所示的基因序列;The sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, and the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
将所述阳性克隆子和原核表达载体连接,得到所述唾液酸酶基因重组表达载体;The positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector;
将所述唾液酸酶基因重组表达载体进行转化,得到重组工程菌;Converting the sialidase gene recombinant expression vector to obtain a recombinant engineering strain;
对得到的重组工程菌进行发酵诱导表达、纯化,得到所述唾液酸酶。The obtained recombinant engineering bacteria are subjected to fermentation-induced expression and purification to obtain the sialidase.
在其中一个实施例中,对得到的重组工程菌进行发酵诱导表达、纯化的步骤中,发酵诱导表达的方法如下:In one embodiment, the fermentation-induced expression in the step of fermentation-induced expression and purification of the obtained recombinant engineering bacteria is as follows:
得到的重组工程菌接种到含氨苄青霉素LB液体培养基,于37℃,150rpm 过夜培养,然后,将过夜培养的菌液全部移到新鲜LB液体培养基中,接着于37℃,180rpm培养3-4h直到OD600=0.8-1.0,加入终浓度为1mM的异丙基-β-D-硫代吡喃半乳糖苷,转移到30℃,180rpm诱导4h后,离心收集菌体。The obtained recombinant engineering bacteria were inoculated into ampicillin-containing LB liquid medium, and cultured at 37 ° C, 150 rpm overnight, and then the whole cultured bacterial liquid was transferred to fresh LB liquid medium, followed by incubation at 37 ° C, 180 rpm. 4h until OD600=0.8-1.0, isopropyl-β-D-thiogalactopyranoside was added to a final concentration of 1 mM, transferred to 30 ° C, induced at 180 rpm for 4 h, and the cells were collected by centrifugation.
在其中一个实施例中,对得到的含有所述唾液酸酶基因重组表达载体的工程菌进行发酵诱导表达、纯化的步骤中,纯化的步骤如下:In one embodiment, in the step of performing fermentation-induced expression and purification of the obtained engineering strain containing the sialidase gene recombinant expression vector, the purification step is as follows:
将离心收集的菌体用1x PBS冲洗两次,离心收集菌体后用10mL含10mmol咪唑的裂解缓冲液重悬,超声破碎,离心取上清液,接着将所述上清液移到镍柱中充分混合静置使其自然下沉,然后用40mL含60mmol-80mmol咪唑洗涤缓冲液冲洗杂蛋白,接着,用4mL含350mmol-500mmol咪唑的洗脱缓冲液洗脱目的蛋白,并用干净的离心管收集目的蛋白,得到所述唾液酸酶。The cells collected by centrifugation were washed twice with 1×PBS, and the cells were collected by centrifugation, resuspended in 10 mL of lysis buffer containing 10 mmol of imidazole, sonicated, centrifuged to obtain a supernatant, and then the supernatant was transferred to a nickel column. Mix thoroughly to allow it to sink naturally, then rinse the protein with 40 mL of 60 mmol-80 mmol imidazole wash buffer, then elute the target protein with 4 mL of elution buffer containing 350 mmol-500 mmol of imidazole, and use a clean centrifuge tube. The protein of interest is collected to obtain the sialidase.
一种采用上述唾液酸酶基因重组表达载体的构建方法制得的唾液酸酶基因重组表达载体。A sialidase gene recombinant expression vector prepared by the method for constructing the above sialidase gene recombinant expression vector.
一种采用上述唾液酸酶的制备方法制备得到的唾液酸酶。A sialidase prepared by the preparation method of the above sialidase.
上述唾液酸酶的制备方法,通过细菌基因组DNA的提取、PCR扩增、构建重组表达载体、转入宿主细胞构建重组表达细胞、重组表达细胞的培养及诱导表达、从培养的宿主细胞中分离、纯化蛋白酶,蛋白酶酶学性质的分析。上述唾液酸酶的制备方法已获得唾液酸酶的基因序列,表达纯化出唾液酸酶,并已分析了唾液酸酶的相关酶学性质。上述唾液酸酶的制备方法制备得到的唾液酸酶耐高温、耐Ph,为工业和社会应用提供更多的基础材料和科学依据。The preparation method of the above sialidase is carried out by extracting bacterial genomic DNA, PCR amplification, constructing a recombinant expression vector, transferring into a host cell, constructing a recombinant expression cell, culturing and inducing expression of the recombinant expression cell, and separating from the cultured host cell. Purification of proteases, analysis of protease enzymatic properties. The preparation method of the above sialidase has obtained the gene sequence of sialidase, and the expression of sialidase has been purified, and the related enzymatic properties of sialidase have been analyzed. The sialidase prepared by the above method for preparing sialidase is resistant to high temperature and Ph, and provides more basic materials and scientific basis for industrial and social applications.
附图说明DRAWINGS
图1为一实施方式的SDS-PAGE检测纯化效果示意图,图中M是marker,泳道1是未加诱导剂对照;2是未纯化的诱导表达蛋白;3和4是纯化后的蛋白;1 is a schematic diagram showing the purification effect of SDS-PAGE according to an embodiment, wherein M is a marker, Lane 1 is an uninducer control; 2 is an unpurified induced expression protein; 3 and 4 are purified proteins;
图2为唾液酸酶催化反应的温度影响图;Figure 2 is a temperature influence diagram of a sialidase catalytic reaction;
图3为唾液酸酶催化反应的pH影响图。Figure 3 is a graph of the pH effect of a sialidase catalytic reaction.
具体实施方式detailed description
为了使本发明的目的、技术方案及优点更加清晰,如下结合附图及实施例,对本发明进行进一步详细说明。应当理解,此处所描述的具体实施例仅仅用以解释本发明,并不用于限定本发明。所用试剂或仪器未注明生产厂商者,均为可以通过购买获得的常规产品。In order to make the objects, technical solutions and advantages of the present invention more clear, the present invention will be further described in detail below with reference to the accompanying drawings and embodiments. It is understood that the specific embodiments described herein are merely illustrative of the invention and are not intended to limit the invention. The reagents or instruments used are not specified by the manufacturer, and are conventional products that can be obtained through purchase.
一实施方式的唾液酸酶的制备方法,包括如下步骤:A method for preparing a sialidase according to an embodiment comprises the following steps:
S10、制备唾液酸酶基因重组表达载体,即重组工程菌。S10, preparing a recombinant expression vector of a sialidase gene, that is, a recombinant engineering bacteria.
S10中,唾液酸酶基因重组表达载体的构建方法包括如下步骤:In S10, the method for constructing a sialidase gene recombinant expression vector comprises the following steps:
S110、制备唾液酸酶基因片段。S110, preparing a sialidase gene fragment.
制备唾液酸酶基因片段的方法为:从大王具足虫肠胃中克隆得到唾液酸酶基因(NanA)的核苷酸序列。采用PowerLyzerR Powersoil DNA isolation kit提取大王具足虫肠胃微生物基因组DNA作为模板进行聚合酶链式反应,得到唾液酸酶基因片段。The sialidase gene fragment is prepared by cloning the nucleotide sequence of the sialidase gene (NanA) from the gastrointestinal tract of the genus. The sialidase gene fragment was obtained by polymerase chain reaction using the PowerLyzerR Powersoil DNA isolation kit to extract the genomic DNA of the gastrointestinal tract microbial bacterium.
其中,聚合酶链式反应采用的引物如下:Among them, the primers used in the polymerase chain reaction are as follows:
SEQ ID NO:2SEQ ID NO: 2
引物F:5’-GGATCCATGGAAAAATTAACAGGAATTTTTG-3’;Primer F: 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3';
SEQ ID NO:3SEQ ID NO: 3
引物R:5’-GTCGACTTATGAAAGATATTTATCAATTATGTT-3’。Primer R: 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3'.
引物F的5’端含有BamHI酶切位点(第1个碱基到第6个碱基),引物 R的5’端含有SalI酶切位点(第1个碱基到第6个碱基)。The 5' end of primer F contains a BamHI restriction site (1st base to 6th base), and the 5' end of primer R contains a SalI restriction site (1st base to 6th base) ).
聚合酶链式反应的反应条件如下:The reaction conditions of the polymerase chain reaction are as follows:
10μL 5×Buffer,4μL dNTP,0.5μL PrimeSTAR HS DNA Polymerase,1μL引物F,1μL引物R,1μL模板,32.5μL H2O,总体积为50μL。10 μL of 5×Buffer, 4 μL of dNTP, 0.5 μL of PrimeSTAR HS DNA Polymerase, 1 μL of primer F, 1 μL of primer R, 1 μL of template, 32.5 μL of H 2 O, total volume of 50 μL.
PCR扩增条件如下:The PCR amplification conditions are as follows:
98℃预变性10S,98℃变性10s,50℃退火15s,72℃延伸1min,变性、退火、延伸三步进行30个循环,最后72℃补齐末端10min。Pre-denatured 10S at 98°C, denatured at 98°C for 10s, annealed at 50°C for 15s, extended at 72°C for 1min, denatured, annealed and extended in three steps for 30 cycles, and finally finished at 72°C for 10min.
S120、将唾液酸酶基因片段克隆到pMD-18T中,得到连接产物,将连接产物转化E.coli JM109,挑选阳性克隆子测序,获得如SEQ ID NO:1示的基因序列。S120, the sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
其中,pMD-18T购买自TaKaRa公司。Among them, pMD-18T was purchased from TaKaRa.
将唾液酸酶基因片段克隆到pMD-18T中的步骤前,还包括如下步骤:Before the step of cloning the sialidase gene fragment into pMD-18T, the following steps are also included:
将唾液酸酶基因片段用琼脂糖凝胶电泳检测,检测后用胶回收试剂盒进行纯化回收。琼脂糖凝胶电泳检测结果显示得到了大小约885bp的片段。The sialidase gene fragment was detected by agarose gel electrophoresis, and after detection, it was purified by a gel recovery kit. The results of agarose gel electrophoresis showed that a fragment of about 885 bp in size was obtained.
将连接产物挑选阳性克隆子测序的方法为:The method for sequencing the cloning product selection positive clones is:
连接产物转化到大肠杆菌JM109,在含浓度为100μg/mL的氨苄青霉素的LB固体平板上进行培养,挑取平板上生长的白色菌落,通过菌落PCR验证阳性克隆,将验证为阳性的克隆子接入到含浓度为100μg/mL的氨苄青霉素的LB液体培养基,37℃过夜培养,用离心柱型质粒提取试剂盒提取质粒,进行测序(华大公司),测序结果显示所得片段大小为885bp,如SEQ ID NO:1所示。The ligation product was transformed into Escherichia coli JM109, cultured on an LB solid plate containing ampicillin at a concentration of 100 μg/mL, and white colonies grown on the plate were picked, and positive clones were verified by colony PCR, and clones which were verified to be positive were ligated. The LB liquid medium containing ampicillin at a concentration of 100 μg/mL was cultured overnight at 37 ° C, and the plasmid was extracted by a spin column type plasmid extraction kit and sequenced (Hua Da Company). The sequencing result showed that the fragment size was 885 bp. As shown in SEQ ID NO: 1.
S130、将阳性克隆子和原核表达载体连接,得到唾液酸酶基因重组表达载体。S130, linking the positive clone to the prokaryotic expression vector to obtain a sialidase gene recombinant expression vector.
将阳性克隆子和原核表达载体连接的方法如下:The method of ligating a positive clone to a prokaryotic expression vector is as follows:
将阳性克隆子和原核表达载体分别用BamHI和SalI双酶切后,电泳回收酶切片段,并用T4连接酶在16℃连接2h,得到唾液酸酶基因重组表达载体。The positive clone and the prokaryotic expression vector were digested with BamHI and SalI, respectively, and the restriction fragment was electrophoresed and ligated with T4 ligase at 16 ° C for 2 h to obtain a sialidase gene recombinant expression vector.
其中,原核表达载体为质粒或其他载体。优选的,原核表达载体为pET载体系列或其他原核表达载体。更优选的,原核表达载体为pET-30a。Among them, the prokaryotic expression vector is a plasmid or other vector. Preferably, the prokaryotic expression vector is a pET vector series or other prokaryotic expression vector. More preferably, the prokaryotic expression vector is pET-30a.
编码唾液酸酶的核苷酸序列可以有效连接到表达载体中的适当启动子上,以指导mRNA的合成。这些启动子的代表性例子如:大肠杆菌的lac或trp启动子、λ噬菌体的PL启动子、真核启动子的CMV早期启动子和其它一些已知的可控制基因在原核细胞或真核细胞或其病毒中表达的启动子。表达载体还包括翻译起始用的核糖体结合位点和转录终止子等。The nucleotide sequence encoding the sialidase can be operably linked to an appropriate promoter in an expression vector to direct the synthesis of the mRNA. Representative examples of such promoters are: lac or trp promoter of E. coli, PL promoter of lambda phage, CMV early promoter of eukaryotic promoter and other known controllable genes in prokaryotic or eukaryotic cells Or a promoter expressed in the virus. The expression vector also includes a ribosome binding site for translation initiation, a transcription terminator, and the like.
上述唾液酸酶基因重组表达载体的构建方法,通过细菌基因组DNA的提取、PCR扩增、构建重组表达载体,方法简单,易操作。The method for constructing the above sialidase gene recombinant expression vector is simple and easy to operate by extracting bacterial genomic DNA, PCR amplification, and constructing a recombinant expression vector.
S20、将唾液酸酶基因重组表达载体进行转化,得到重组工程菌。S20, transforming a sialidase gene recombinant expression vector to obtain a recombinant engineering strain.
将唾液酸酶基因重组表达载体进行转化的方法如下:The method for transforming the sialidase gene recombinant expression vector is as follows:
将产物转化入宿主细胞中,在含100μg/mL氨苄青霉素的LB固体平板上进行培养,挑取平板上生长的白色菌落,通过菌落PCR和提取质粒单、双酶切筛选到阳性克隆并测序鉴定,得到重组工程菌。即成功构建含有唾液酸酶基因的大肠杆菌宿主细胞。The product was transformed into host cells, cultured on LB solid plate containing 100 μg/mL ampicillin, white colonies grown on the plate were picked, and positive clones were screened by colony PCR and plasmid extraction and double restriction enzyme digestion and identified by sequencing. , obtained recombinant engineering bacteria. That is, an E. coli host cell containing a sialidase gene was successfully constructed.
宿主细胞可以为大肠杆菌、真菌细胞或酵母等。优选的,宿主细胞为大肠杆菌BL21(DE3)。The host cell may be Escherichia coli, fungal cell or yeast or the like. Preferably, the host cell is Escherichia coli BL21 (DE3).
S30、对得到重组工程菌进行发酵诱导表达、纯化,得到唾液酸酶。S30, performing fermentation induction-inducing expression and purification on the obtained recombinant engineering bacteria to obtain sialidase.
S30中,发酵诱导表达的方法如下:In S30, the method of fermentation-induced expression is as follows:
得到的重组工程菌接种到含氨苄青霉素LB液体培养基,于37℃,150rpm过夜培养,然后,将过夜培养的菌液全部移到新鲜LB液体培养基中,接着于 37℃,180rpm培养3-4h直到OD600=0.8-1.0,加入终浓度为1mM的异丙基-β-D-硫代吡喃半乳糖苷(Isopropylβ-D-Thiogalactoside,IPTG),转移到30℃,180rpm诱导3-4h后,离心收集菌体。The obtained recombinant engineering bacteria were inoculated into ampicillin-containing LB liquid medium, and cultured at 37 ° C, 150 rpm overnight, and then the whole cultured bacterial liquid was transferred to fresh LB liquid medium, followed by incubation at 37 ° C, 180 rpm. 4h until OD600=0.8-1.0, add isopropyl-β-D-Thiogalactoside (IPTG) at a final concentration of 1 mM, transfer to 30 ° C, induce 3-4 h after 180 rpm The cells were collected by centrifugation.
S30中,纯化的步骤如下:In S30, the steps of purification are as follows:
将离心收集的菌体用1x PBS洗两次离心收集菌体后用10mL含10mmol咪唑的裂解缓冲液重悬,超声破碎,离心取上清液,接着将上清液移到镍柱中充分混合静置使其自然下沉,然后用40mL含60mmol-80mmol咪唑的洗涤缓冲液冲洗杂蛋白,接着,用4mL含350mmol-500mmol咪唑的洗脱缓冲液洗脱目的蛋白,并用干净的离心管收集目的蛋白,得到纯化的唾液酸酶。The cells collected by centrifugation were washed twice with 1× PBS, and the cells were collected by centrifugation, resuspended in 10 mL of lysis buffer containing 10 mmol of imidazole, sonicated, centrifuged to obtain a supernatant, and then the supernatant was transferred to a nickel column and thoroughly mixed. Allow to stand naturally to sink, then rinse the protein with 40 mL of washing buffer containing 60 mmol-80 mmol of imidazole, then elute the target protein with 4 mL of elution buffer containing 350 mmol-500 mmol of imidazole, and collect it with a clean centrifuge tube. Protein, resulting in purified sialidase.
其中,裂解缓冲液包括如下组分:NaH2PO4 50mM,NaCl 300mM,咪唑10mM。Among them, the lysis buffer includes the following components: NaH2PO4 50 mM, NaCl 300 mM, and imidazole 10 mM.
洗涤缓冲液包括如下组分:NaH2PO4 50mM,NaCl 300mM,咪唑60-80mM。The wash buffer included the following components: NaH2PO4 50 mM, NaCl 300 mM, imidazole 60-80 mM.
洗脱缓冲液包括如下组分:NaH2PO4 50mM,NaCl 300mM,咪唑350-500mM。The elution buffer included the following components: NaH2PO4 50 mM, NaCl 300 mM, imidazole 350-500 mM.
蛋白液上镍柱进行纯化,镍柱中的硫酸镍可以与有组氨酸(Histidine,His)标签的蛋白结合,也可以与咪唑结合。The protein solution is purified on a nickel column, and the nickel sulfate in the nickel column can be bound to a protein labeled with histidine (Hisidine, His) or combined with imidazole.
为验证表达的唾液酸酶是否有酶活,对纯化后的唾液酸酶进行酶活测定及相关酶学性质分析,其结果如图2和图3所示。In order to verify whether the expressed sialidase has an enzyme activity, the purified sialidase was subjected to enzyme activity measurement and related enzymatic properties, and the results are shown in Fig. 2 and Fig. 3.
此外,还提供一种采用上述唾液酸酶基因重组表达载体的构建方法制得的唾液酸酶基因重组表达载体。以及,一种采用上述唾液酸酶的制备方法制备得到的唾液酸酶。Further, a sialidase gene recombinant expression vector obtained by the method for constructing the above-described sialidase gene recombinant expression vector is also provided. And a sialidase prepared by the above-described preparation method of sialidase.
上述唾液酸酶的制备方法,通过细菌基因组DNA的提取、PCR扩增、构建重组表达载体、转入宿主细胞构建重组表达细胞、重组表达细胞的培养及诱 导表达、从培养的宿主细胞中分离、纯化蛋白酶,蛋白酶酶学性质的分析。上述唾液酸酶的制备方法已获得唾液酸酶的基因序列,表达纯化出唾液酸酶,并已分析了唾液酸酶的相关酶学性质。上述唾液酸酶的制备方法制备得到的唾液酸酶耐高温、耐Ph,为工业和社会应用提供更多的基础材料和科学依据。The preparation method of the above sialidase is carried out by extracting bacterial genomic DNA, PCR amplification, constructing a recombinant expression vector, transferring into a host cell, constructing a recombinant expression cell, culturing and inducing expression of the recombinant expression cell, and separating from the cultured host cell. Purification of proteases, analysis of protease enzymatic properties. The preparation method of the above sialidase has obtained the gene sequence of sialidase, and the expression of sialidase has been purified, and the related enzymatic properties of sialidase have been analyzed. The sialidase prepared by the above method for preparing sialidase is resistant to high temperature and Ph, and provides more basic materials and scientific basis for industrial and social applications.
上述唾液酸酶的制备方法,从深海无脊椎动物大王具足虫共生微生物支原体中克隆唾液酸酶基因并进行表达,并对该酶的酶学性质进行分析具有重要的意义。它有助于分析和阐释极端环境下深海生物生存及其适应机制,有利于对深海生物种质资源与天然产物的开发利用,也为拓展微生物来源的唾液酸酶及唾液酸的工业化生产提供基础材料和科学依据,为提高微生物代谢产物提供新的思路和方法,具有重要的现实意义和良好的应用前景。In the preparation method of the above sialidase, the sialidase gene is cloned and expressed from the symbiotic microbial mycoplasma of the deep-sea invertebrate genus, and the enzymatic properties of the enzyme are important. It helps to analyze and interpret the survival and adaptation mechanisms of deep-sea living organisms in extreme environments, facilitates the development and utilization of deep-sea biological germplasm resources and natural products, and provides a basis for expanding the industrial production of microbial-derived sialidase and sialic acid. Material and scientific basis, providing new ideas and methods for improving microbial metabolic products, has important practical significance and good application prospects.
下面结合具体实施例进一步进行阐述。The following further describes the embodiments in conjunction with the specific embodiments.
实施例1:从大王具足虫肠胃中克隆得到唾液酸酶基因(NanA)的核苷酸序列。采用PowerLyzerR Powersoil DNA isolation kit提取大王具足虫肠胃微生物基因组DNA,取1μL为模板进行聚合酶链式反应(PCR),结合所用载体设计引物(引物F和引物R),在此PCR反应过程中所用引物、组分和扩增条件如下:Example 1: The nucleotide sequence of the sialidase gene (NanA) was cloned from the gastrointestinal tract of the footworm. The PowerLyzerR Powersoil DNA isolation kit was used to extract the genomic DNA of the gastrointestinal tract of the genus Apothecary, and 1 μL was used as a template for polymerase chain reaction (PCR), and the primers (primer F and primer R) were designed in combination with the primers used in the PCR reaction. , components and amplification conditions are as follows:
引物F:5’-GGATCCATGGAAAAATTAACAGGAATTTTTG-3’Primer F: 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3’
引物R:5’-GTCGACTTATGAAAGATATTTATCAATTATGTT-3’Primer R: 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3’
PCR反应体系:10μL 5×Buffer,4μL dNTP,0.5μL PrimeSTAR HS DNA Polymerase,1μL引物F,1μL引物R,1μL模板,32.5μL H2O,总体积为50μL。PCR reaction system: 10 μL of 5×Buffer, 4 μL of dNTP, 0.5 μL of PrimeSTAR HS DNA Polymerase, 1 μL of primer F, 1 μL of primer R, 1 μL of template, 32.5 μL of H 2 O, and a total volume of 50 μL.
PCR扩增条件如下所示:The PCR amplification conditions are as follows:
98℃预变性10S,98℃变性10s,50℃退火15s,72℃延伸1min,变 性、退火、延伸三步进行30个循环,72℃补齐末端10min。PCR扩增结束后用琼脂糖凝胶电泳检测,结果显示,得到了大小约885bp的片段,用胶回收试剂盒进行纯化回收(离心柱型),把回收片段克隆到pMD-18T(TaKaRa公司产品)中,连接产物转化到大肠杆菌JM109,在含100μg/mL氨苄青霉素的LB固体平板上进行培养,挑取平板上生长的白色菌落,通过菌落PCR验证阳性克隆,将验证为阳性的克隆子接入到含100μg/mL氨苄青霉素LB液体培养基,37℃过夜培养,用质粒提取试剂盒(离心柱型)提取质粒,进行测序(华大公司),测序结果显示所得片段大小为885bp,如SEQ ID NO:1所示。Pre-denaturation 10S at 98°C, denaturation at 98°C for 10s, annealing at 50°C for 15s, extension at 72°C for 1min, 30 cycles of variability, annealing and extension, and end of 10° at 72°C. After PCR amplification, the results of agarose gel electrophoresis showed that a fragment of about 885 bp in size was obtained and purified by a gel recovery kit (centrifugation column type), and the recovered fragment was cloned into pMD-18T (TaKaRa product). In the case, the ligation product was transformed into Escherichia coli JM109, cultured on an LB solid plate containing 100 μg/mL ampicillin, white colonies grown on the plate were picked, positive clones were verified by colony PCR, and clones verified to be positive were ligated. The medium was cultured in an LB liquid medium containing 100 μg/mL ampicillin, and cultured at 37 ° C overnight. The plasmid was extracted by a plasmid extraction kit (centrifugal column type) and sequenced (Hua Da Company). The sequencing result showed that the fragment size was 885 bp, such as SEQ. ID NO: 1 is shown.
实施例2:重组表达载体的构建Example 2: Construction of recombinant expression vector
实施例1中扩增得到的片段,因其引物F的5’端含有BamHI酶切位点(第1个碱基到第6个碱基),引物R的5’端含有SalI酶切位点(第1个碱基到第6个碱基),所以使用这两个酶对片段进行双酶切,同时将pET-30a用相同的酶进行双酶切,电泳回收酶切片段,并用T4连接酶在16℃连接2h,构建重组表达载体。连接产物转化入大肠杆菌BL21(DE3)中,在含氨苄青霉素(100μg/mL)的LB固体平板上进行培养,挑取平板上生长的白色菌落,通过菌落PCR和提取质粒单、双酶切筛选到阳性克隆并测序鉴定,成功构建含有唾液酸酶基因的大肠杆菌宿主细胞。The fragment amplified in Example 1 has a BamHI restriction site (1st base to 6th base) at the 5' end of the primer F, and a SalI restriction site at the 5' end of the primer R (1st base to 6th base), so the fragments were double-digested with these two enzymes, and pET-30a was digested with the same enzyme, and the digested fragments were electrophoresed and linked with T4. The enzyme was ligated at 16 ° C for 2 h to construct a recombinant expression vector. The ligation product was transformed into E. coli BL21 (DE3), cultured on LB solid plate containing ampicillin (100 μg/mL), and white colonies grown on the plate were picked and screened by colony PCR and plasmid extraction and double digestion. To the positive clone and sequence identification, E. coli host cells containing the sialidase gene were successfully constructed.
实施例3:唾液酸蛋白酶的表达与纯化Example 3: Expression and purification of sialic acid protease
将实施例2中得到的重组工程菌接种到10mLLB液体培养基(含100μg/mL氨苄青霉素),37℃,150rpm过夜培养,第二天将过夜培养的菌液全部移到250mL的新鲜LB液体培养基中,接着于37℃,180rpm培养3-4h直到OD600=0.8-1.0,加入终浓度为1mM的IPTG(异丙基-β-D-硫代吡喃半乳糖苷),转移到30℃,180rpm诱导4h后,离心收集菌体,将菌体用10mL 含10mmol咪唑的裂解缓冲液重悬,超声破碎,离心取上清。蛋白液上镍柱进行纯化,镍柱中的硫酸镍可以与有His(组氨酸)标签的蛋白结合,也可以与咪唑结合,先将蛋白液以一定速度通过镍柱使蛋白质挂柱,然后用不同浓度的咪唑缓冲液进行洗脱。将上述的上清液移到镍柱中充分混合静置使其自然下沉,然后用40mL含60mmol-80mmol咪唑的洗涤缓冲液冲洗杂蛋白,用4mL含350mmol-500mmol咪唑的洗脱缓冲液洗脱目的蛋白,用干净的离心管分别收集目的蛋白,洗脱液用SDS聚丙烯酰胺凝胶电泳(SDS-PAGE)检测,纯化的效果如图1所示。The recombinant engineering bacteria obtained in Example 2 were inoculated into 10 mL of LB liquid medium (containing 100 μg/mL ampicillin), cultured at 37 ° C, 150 rpm overnight, and the whole day was transferred to 250 mL of fresh LB liquid culture. In the medium, followed by incubation at 37 ° C, 180 rpm for 3-4 h until OD600 = 0.8-1.0, adding IPTG (isopropyl-β-D-thiogalactopyranoside) at a final concentration of 1 mM, and transferring to 30 ° C, After induction for 4 h at 180 rpm, the cells were collected by centrifugation, and the cells were resuspended in 10 mL of a lysis buffer containing 10 mmol of imidazole, sonicated, and the supernatant was centrifuged. The protein solution is purified on a nickel column. The nickel sulfate in the nickel column can be combined with a protein having a His (histidine) tag, or can be combined with an imidazole. The protein solution is first passed through a nickel column at a certain speed to hang the protein, and then Elution was carried out with different concentrations of imidazole buffer. The above supernatant was transferred to a nickel column and thoroughly mixed to allow it to naturally sink. Then, the heteroprotein was washed with 40 mL of a washing buffer containing 60 mmol-80 mmol of imidazole, and washed with 4 mL of an elution buffer containing 350 mmol-500 mmol of imidazole. The target protein was separately collected by a clean centrifuge tube, and the eluate was detected by SDS polyacrylamide gel electrophoresis (SDS-PAGE). The purification effect is shown in FIG.
实施例4:酶活的测定Example 4: Determination of enzyme activity
将纯化后的蛋白酶溶液装到透析袋中,放入透析液(PBS)于4℃中透析24h,其中换液两至三次。将透析好的蛋白放入浓缩管中进行适当浓缩,取少量浓缩后的样品进行SDS-PAGE分析,根据BSA浓度标准曲线估算蛋白浓度。为验证表达的蛋白是否有酶活,对纯化后的蛋白进行酶活测定及相关酶学性质分析,该酶催化的裂解方向以N-乙酰神经氨酸(Neu5Ac)为底物,裂解方向的活性通过分光光度计测定,以酶偶联的方法,其原理是N-乙酰神经氨酸裂解生成的丙酮酸能在NADH和乳酸脱氢酶存在的条件下被还原成乳酸,过程中消耗了NADH,引起340nm波长下对NADH吸光度的下降。一个酶活力单位定义为:在pH 7.0、37℃下,1min裂解1μmol Neu5Ac生成1μmolN-乙酰-D-甘露糖胺和丙酮酸所需酶的量。反应体系包括4mmol/L Neu5Ac、150umol/L NADH、0.5U LDH、1.5ug酶。酶催化的合成方向以N-乙酰甘露糖胺(ManNAc)和丙酮酸(Pyr)为底物,合成方向的活性通过HPLC测定,其原理为:仅加入ManNAc、Pyr和酶,通过HPLC检测Neu5Ac的生成量确定活力大小。一个酶活力单位定义为:在p H 7.0、37℃下,1min合成1μmol Neu5Ac所需要的酶量。反应体系包括30mmol/L ManNAc,100mmol/L Pyr和20μg酶。酶活检测结果如图2和图3所示。The purified protease solution was loaded into a dialysis bag, dialyzed against dialysis solution (PBS) at 4 ° C for 24 h, and the solution was changed two to three times. The dialyzed protein was placed in a concentrating tube and concentrated appropriately. A small amount of the concentrated sample was subjected to SDS-PAGE analysis, and the protein concentration was estimated based on the BSA concentration standard curve. In order to verify whether the expressed protein has enzymatic activity, the purified protein is subjected to enzyme activity assay and related enzymatic properties. The enzyme catalyzes the cleavage direction with N-acetylneuraminic acid (Neu5Ac) as a substrate, and the activity in the direction of cleavage The method of enzymatic coupling is determined by a spectrophotometer. The principle is that pyruvic acid produced by the cleavage of N-acetylneuraminic acid can be reduced to lactic acid in the presence of NADH and lactate dehydrogenase, and NADH is consumed in the process. A decrease in the absorbance of NADH at a wavelength of 340 nm is caused. One enzyme activity unit is defined as the amount of enzyme required to cleave 1 μmol of Neu5Ac to produce 1 μmol of N-acetyl-D-mannosamine and pyruvate at pH 7.0, 37 ° C for 1 min. The reaction system included 4 mmol/L Neu5Ac, 150 umol/L NADH, 0.5 U LDH, 1.5 ug enzyme. The enzyme-catalyzed synthesis direction uses N-acetylmannosamine (ManNAc) and pyruvate (Pyr) as substrates, and the synthesis direction activity is determined by HPLC. The principle is: only ManNAc, Pyr and enzyme are added, and the Neu5Ac is detected by HPLC. The amount of generation determines the amount of vitality. One enzyme activity unit is defined as the amount of enzyme required to synthesize 1 μmol of Neu5Ac in 1 min at p H 7.0, 37 °C. The reaction system included 30 mmol/L ManNAc, 100 mmol/L Pyr and 20 μg enzyme. The results of the enzyme activity test are shown in Figures 2 and 3.
以上所述仅是本发明的优选实施方式,应当指出,对于本技术领域的普通技术人员,在不脱离本发明原理的前提下,还可以做出若干改进和润饰,这些改进和润饰也应视为本发明的保护范围。The above description is only a preferred embodiment of the present invention, and it should be noted that those skilled in the art can also make several improvements and retouchings without departing from the principles of the present invention. These improvements and retouchings should also be considered. It is the scope of protection of the present invention.

Claims (10)

  1. 一种唾液酸酶基因重组表达载体的构建方法,其特征在于,包括以下步骤:A method for constructing a sialidase gene recombinant expression vector, comprising the steps of:
    制备唾液酸酶基因片段;Preparing a sialidase gene fragment;
    将所述唾液酸酶基因片段克隆到pMD-18T中,得到连接产物,将所述连接产物转化E.coli JM109,挑选阳性克隆子测序,获得如SEQ ID NO:1所示的基因序列;The sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
    将所述阳性克隆子和原核表达载体连接,得到所述唾液酸酶基因重组表达载体。The positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector.
  2. 如权利要求1所述的唾液酸酶基因重组表达载体的构建方法,其特征在于,制备唾液酸酶基因片段的方法如下:The method for constructing a sialidase gene recombinant expression vector according to claim 1, wherein the method for preparing a sialidase gene fragment is as follows:
    采用PowerLyzerR Powersoil DNA isolation kit提取大王具足虫肠胃微生物基因组DNA作为模板进行聚合酶链式反应,得到所述唾液酸酶基因片段;其中,聚合酶链式反应采用的引物如下:The sialidase gene fragment was obtained by polymerase chain reaction using the PowerLyzerR Powersoil DNA isolation kit as a template to extract the sialidase gene fragment; wherein the primers used in the polymerase chain reaction were as follows:
    引物F:5’-GGATCCATGGAAAAATTAACAGGAATTTTTG-3’;Primer F: 5'-GGATCCATGGAAAAATTAACAGGAATTTTTG-3';
    引物R:5’-GTCGACTTATGAAAGATATTTATCAATTATGTT-3’。Primer R: 5'-GTCGACTTATGAAAGATATTTATCAATTATGTT-3'.
  3. 如权利要求1所述的唾液酸酶基因重组表达载体的构建方法,其特征在于,将所述唾液酸酶基因片段克隆到pMD-18T中的步骤前,还包括如下步骤:The method for constructing a sialidase gene recombinant expression vector according to claim 1, wherein before the step of cloning the sialidase gene fragment into pMD-18T, the method further comprises the steps of:
    将所述唾液酸酶基因片段用琼脂糖凝胶电泳检测,检测后用胶回收试剂盒进行纯化回收。The sialidase gene fragment is detected by agarose gel electrophoresis, and after detection, it is purified and recovered by a gel recovery kit.
  4. 如权利要求1所述的唾液酸酶基因重组表达载体的构建方法,其特征在于,将所述阳性克隆子和原核表达载体连接的方法如下:The method for constructing a sialidase gene recombinant expression vector according to claim 1, wherein the method of ligating the positive clone and the prokaryotic expression vector is as follows:
    将所述阳性克隆子和原核表达载体分别经BamH I和SalI双酶切后,电泳回收酶切片段,并用T4连接酶在16℃连接2h,得到所述唾液酸酶基因重组表达载体。The positive clone and the prokaryotic expression vector were digested with BamH I and SalI, respectively, and the fragment was electrophoretically recovered, and ligated with T4 ligase at 16 ° C for 2 h to obtain the sialidase gene recombinant expression vector.
  5. 如权利要求1所述的唾液酸酶基因重组表达载体的构建方法,其特征在于,所述原核表达载体为质粒。The method for constructing a sialidase gene recombinant expression vector according to claim 1, wherein the prokaryotic expression vector is a plasmid.
  6. 一种唾液酸酶的制备方法,其特征在于,包括如下步骤:A method for preparing a sialidase, comprising the steps of:
    制备唾液酸酶基因片段;Preparing a sialidase gene fragment;
    将所述唾液酸酶基因片段克隆到pMD-18T中,得到连接产物,将所述连接产物转化E.coli JM109,挑选阳性克隆子测序,获得如SEQ ID NO:1所示的基因序列;The sialidase gene fragment was cloned into pMD-18T to obtain a ligation product, the ligation product was transformed into E. coli JM109, and the positive clone was selected for sequencing to obtain the gene sequence as shown in SEQ ID NO: 1.
    将所述阳性克隆子和原核表达载体连接,得到所述唾液酸酶基因重组表达载体;The positive clone is ligated to a prokaryotic expression vector to obtain the sialidase gene recombinant expression vector;
    将所述唾液酸酶基因重组表达载体进行转化,得到重组工程菌;Converting the sialidase gene recombinant expression vector to obtain a recombinant engineering strain;
    对得到的所述重组工程菌进行发酵诱导表达、纯化,得到所述唾液酸酶。The recombinant engineered bacteria obtained are subjected to fermentation-induced expression and purification to obtain the sialidase.
  7. 如权利要求6所述的唾液酸酶的制备方法,其特征在于,对得到的重组工程菌进行发酵诱导表达、纯化的步骤中,发酵诱导表达的方法如下:The method for preparing a sialidase according to claim 6, wherein in the step of performing fermentation-induced expression and purification on the obtained recombinant engineering bacteria, the fermentation-induced expression is as follows:
    得到的重组工程菌接种到含氨苄青霉素LB液体培养基,于37℃,180rpm过夜培养,然后,将过夜培养的菌液全部移到新鲜LB液体培养基中,接着于37℃,180rpm培养3-4h直到OD600=0.8-1.0,加入终浓度为1mM的异丙基-β-D-硫代吡喃半乳糖苷,转移到30℃,180rpm诱导4h后,离心收集菌体。The obtained recombinant engineering bacteria were inoculated into ampicillin-containing LB liquid medium, and cultured at 37 ° C, 180 rpm overnight, and then all the overnight cultured bacterial liquid was transferred to fresh LB liquid medium, followed by incubation at 37 ° C, 180 rpm - 4h until OD600=0.8-1.0, isopropyl-β-D-thiogalactopyranoside was added to a final concentration of 1 mM, transferred to 30 ° C, induced at 180 rpm for 4 h, and the cells were collected by centrifugation.
  8. 如权利要求7所述的唾液酸酶的制备方法,其特征在于,对得到的含有所述唾液酸酶基因重组表达载体的工程菌进行发酵诱导表达、纯化的步骤中,纯化的步骤如下:The method for producing a sialidase according to claim 7, wherein in the step of performing fermentation-induced expression and purification of the obtained engineering strain containing the sialidase gene recombinant expression vector, the purification step is as follows:
    将离心收集的菌体用1x PBS冲洗两次,离心收集菌体后用10mL含10mmol咪唑的裂解缓冲液重悬,超声破碎,离心取上清液,接着将所述上清液移到镍柱中充分混合静置使其自然下沉,然后用40mL含60mmol-80mmol咪唑的洗涤缓冲液冲洗杂蛋白,接着,用4mL含350mmol-500mmol咪唑的洗脱缓冲液洗脱目的蛋白,并用干净的离心管收集目的蛋白,得到所述唾液酸酶。The cells collected by centrifugation were washed twice with 1×PBS, and the cells were collected by centrifugation, resuspended in 10 mL of lysis buffer containing 10 mmol of imidazole, sonicated, centrifuged to obtain a supernatant, and then the supernatant was transferred to a nickel column. Mix well to allow it to naturally sink, then rinse the protein with 40 mL of washing buffer containing 60 mmol-80 mmol of imidazole, then elute the target protein with 4 mL of elution buffer containing 350 mmol-500 mmol of imidazole, and clean with a clean centrifuge. The target protein is collected by a tube to obtain the sialidase.
  9. 一种采用如权利要求1-5中任意一项所述的唾液酸酶基因重组表达载体的构建方法制得的唾液酸酶基因重组表达载体。A sialidase gene recombinant expression vector obtained by the method for constructing a sialidase gene recombinant expression vector according to any one of claims 1 to 5.
  10. 一种采用如权利要求6-8中任意一项所述的唾液酸酶的制备方法制备得到的唾液酸酶。A sialidase prepared by the method for producing a sialidase according to any one of claims 6-8.
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