WO2015198199A1 - Hsa-gdf-15 fusion polypeptide and use thereof. - Google Patents

Hsa-gdf-15 fusion polypeptide and use thereof. Download PDF

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Publication number
WO2015198199A1
WO2015198199A1 PCT/IB2015/054638 IB2015054638W WO2015198199A1 WO 2015198199 A1 WO2015198199 A1 WO 2015198199A1 IB 2015054638 W IB2015054638 W IB 2015054638W WO 2015198199 A1 WO2015198199 A1 WO 2015198199A1
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gdf15
fusion polypeptide
seq
moiety
hsa
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PCT/IB2015/054638
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French (fr)
Inventor
Rajiv Chopra
Norio Hamamatsu
Ryan Scott STREEPER
Brian Edward Vash
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Novartis Ag
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Priority to EP15732960.8A priority Critical patent/EP3157947A1/en
Priority to US15/321,246 priority patent/US20170204149A1/en
Publication of WO2015198199A1 publication Critical patent/WO2015198199A1/en
Priority to US16/541,703 priority patent/US20200181216A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/475Growth factors; Growth regulators
    • C07K14/4756Neuregulins, i.e. p185erbB2 ligands, glial growth factor, heregulin, ARIA, neu differentiation factor
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/475Growth factors; Growth regulators
    • C07K14/495Transforming growth factor [TGF]
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/76Albumins
    • C07K14/765Serum albumin, e.g. HSA
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/31Fusion polypeptide fusions, other than Fc, for prolonged plasma life, e.g. albumin

Definitions

  • Obesity has reached near epidemic proportions, with an estimated 36% of the adult population considered obese or overweight.
  • Obesity is a chronic disease associated with high morbidity and mortality.
  • Obesity presents its own health problems, and is also associated with a variety of other diseases such as hypertension, hyper] ipidemia, diabetes mellitus, atherosclerosis, coronary artery disease, sleep apnea, gout, rheumatism and arthritis.
  • GDF15 Growth Differentiation Factor 15
  • Ml CI macrophage inhibitory cytokine 1
  • PLAB placental bone morphogenetic factor
  • PTGFB placental transforming growth factor beta
  • PDF prostate derived factor
  • GDF15 nonsteroidal antiinflammatory drug-activated gene
  • NAG-1 nonsteroidal antiinflammatory drug-activated gene
  • the mature GDF15 peptide shares low homology with other family members (Katoh M 2006, Int J Mol Med. 17:951 -5.).
  • GDF15 is synthesized as a large precursor protein that is cleaved at the dibasic cleavage site to release the carboxyterminal mature peptide. Human full-length precursor contains 308 amino acids and is cleaved at the RGRRRAR (SEQ ID NO:43) cleavage site to produce the mature GDF peptide.
  • Naturally occurring GDF15 is a 25KD homodimer of the mature peptide covalently linked by one inter-chain disulfide bond.
  • GDF 15 is reported to be relevant to a number of different physiological and pathologic conditions. For example, studies of GDF15 knockout and transgenic mice suggest that GDF 15 may be protective against ischemic/reperfusion- or overload-induced heart injury (KempfT, 2006, Circ i3 ⁇ 43 ⁇ 4 ⁇ 98:35 i-60) (Xu J, 2006, Circ Res. 98:342-50), protective against aging-associated motor neuron and sensory neuron loss (Strelau J, 2009, J Neurosci. 29 : 13640-8), mildly protective against metabolic acidosis in kidney, and may cause cachexia in cancer patients (Johnen H 2007 Nat Med. 11 : 1333-40).
  • GDF 15 is also reported to be protective against carcinogen- or Ape mutation- induced neoplasia in intestine and lung (Baek SJ 2006, Gastroenterology. 131 : 1553-60; Cekanova M 2009, Cancer Prev Res 2:450- 8),
  • GDF 15 has anorexigenic effects, particularly in cancer (Brown D. A. Clinical Cancer Res 2003; 9:2642-2650; Koopman J. Clinical Cancer Res 2006; 12:442-446). Substantial elevation of circulating MIC-1/GDF15 levels in cancers and other diseases such as chronic renal or cardiac failure are associated with a lower body mass index (Breit S.N. et al, Growth factors 201 1 ; 29: 187-195; Johnen H. et al, Nat Med. 2007; 13: 1333-1340), suggesting that apart from any role in inflammation in disease, M1C-1/GDF15 may also play a role in body weight regulation.
  • HSA Human Serum Albumin
  • Plasma protein of about 66,500 KDa and is comprised of 585 amino acids, including at least 17 disulfide bridges.
  • Peters, T,, jr. 1996, All about Albumin: Biochemistry, Genetics and Medical, Applications, p lO, Academic Press, inc., Orlando (ISBN 0-12-552110-3).
  • HSA has a long half-life and is cleared very slowly by the liver. The plasma half-life of HSA is reported to be approximately 19 days (Peters, ! ' ., Jr. (1985) ⁇ *>.
  • HSA has been used to produce fusion proteins that have improved shelf and half- iifes.
  • PCX Publications WO 01/79271 A and WO 03/59934 A disclose a albumin fusion proteins comprising a variety of therapeutic protein (e.g., growth factors, scFvs) and HSA that are reported to have longer shelf and half-lifes than the therapeutic proteins alone.
  • PCT Publication WO 13/1 13008 A discloses GDF15-Fc fusions tor treatment or amelioration of metabolic disorders including obesity. This patent application reports efficacy of GDF15-Fc fusion in obese mice and overweight monkeys.
  • the present invention relates to fusion polypeptides comprising the Human Serum Albumin (HSA) or a functional variant thereof and the human GDF15 or a functional variant thereof.
  • HSA Human Serum Albumin
  • the fusion polypeptides comprise a first moiety, a second moiety and optionally a linker that links the first moiety to the second moiety.
  • the first moiety can be human serum albumin (HSA) or a functional variant thereof
  • the second moiety is human GDF15 protein or a functional variant thereof; and the first moiety is amino terminal to the second moiety.
  • the fi rst moiety can have at least about 80% sequence identity to mature HSA (SEQ ID NO:45).
  • the first moiety can be mature HSA (SEQ ID NO:45).
  • the first moiety is a functional variant of HSA, such as a portion of HSA as described herein, or mature HSA in which one or more amino acids is replaced with another amino (e.g., C34S and N503Q).
  • the fusion polypeptides contains a first moiety is selected from the group consisting of HSA (25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin; and a second moiety is selected from the group consisting human mature GDF15 peptide (197-308) (SEQ ID NO:44), human GDF15(211-308) (amino acids 211-308 of SEQ ID NO: 1), human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S), human GDF15(97-308) (SEQ ID NO:44) in which Cys273 is replaced with Ser (C273S).
  • HSA 25-609
  • HSA(25-609) HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin
  • a second moiety is selected from the group consisting human mature GDF15 peptide
  • the second moiety includes a functional variant of GDF15 (SEQ ID NO:44), such as a variant in which the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg, the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 199 of SEQ ID NO: 1 is not Asn; or the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg and the amino acid residue that corresponds to position 199 of SEQ ID NO: 1 is not Asn.
  • the fusion polypeptides contains a second moiety in which the ammo acid that corresponds to position 198 in human GDF15 is His and amino acid that corresponds to position 199 in human GDF15 is Ala.
  • the second moiety in the fusion polypeptide can additionally or alternatively comprises an amino acid replacement or deletion of one or more surface exposed residues, one or more N-terminal amino acids (amino acids 197-210), Cys 203, Cys 210 and/or Cys273.
  • Amino acid residues that are surface exposed on GDF15 include Arg217, Ser219, AIa226, Glu234, Ala243, Ser246, Gln247, Arg263, Lys265, Thr268, Ala277, Asn280, Lys287, Thr290, Lys303 and Asp304.
  • the fusion polypeptides further comprises a linker that links the first moiety and the second moiety .
  • the linker can be sequence selected from the group consisting of (GGGGS)n and (GPPGS)n, wherein n is one to about 20.
  • the linker is (GGGGS)n, and n is 3.
  • the fusion polypeptide has an amino acid sequence selected from the group consisting of SEQ ID NOS:20, 26, 28, 30, 32, 38, 40 and 42.
  • the fusion polypeptide can be a homodimer, heterodimer or monomer, and is preferably a homodimer or monomer.
  • the invention relates to a nucleic acid molecule (e.g., an isolated nucleic acid molecule), including DNA and RNA molecule and expression vectors, that encodes a fusion polypeptide as described herein .
  • the invention also relates to a host cell comprising a recombinant nucleic acid that encodes a fusion polypeptide as described herein.
  • the invention also relates to a method for making an a fusion polypeptide as described herein, comprising maintaining a host cell of the invention under conditions suitable for expression of the nuclei c acid, whereby the recombinant nucleic acid is expressed and the fusion polypeptide is produced. If desired, the method can further comprise isolating the fusion polypeptide.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a fusion polypeptide as described herein and a pharmaceutically or physiologically acceptable carrier.
  • Preferred pharmaceutical compositions are for subcutaneous administration,
  • the invention also relates to methods for decreasing appetite, decreasing body weight and treating metabolic diseases in a subject in need thereof, said method comprising administering to the subject in need thereof an effecti ve amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • the invention relates to methods for treating type 2 diabetes mellitus, obesity, pancreatitis, dvslipidemia, nonalcoholic steatohepatitis, insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders or body weight disorders in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • a GDF15 fusion polypeptide usually in the form of a pharmaceutical composition
  • the invention relates to a methods for treating genetic obesity in a subject in need thereof, such as a subject with Prader-Willi syndrome, leptin mutations and/or melanocortin 4 receptor mutations, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • a GDF15 fusion polypeptide usually in the form of a pharmaceutical composition
  • the invention also relates to the use of a fusion polypeptide as described herein for use in therapy and in the manufacture of a medicament for treating a disease or condition as disclosed herein (e.g., decreasing appetite, decreasing body weight and treating metabolic diseases).
  • a disease or condition e.g., decreasing appetite, decreasing body weight and treating metabolic diseases.
  • Figs, la and lb are images of polyacrylamide gels in which Fc-GDF15 fusion protein (Fig. la) or mouse serum Albumin-GDF15 fusion proteins (Fig. lb) were run under non-reducing and reducing conditions.
  • Fig. la shows that a large proportion of the fusion protein (SEQ ID NO:36) migrated close to the origin under non-reducing conditions, indicating that the fusion protein aggregated.
  • Fig. lb. shows that the albumin fusion protein (SEQ ID NO: 16) migrated at the expected molecular weight under non-reducing conditions, indicating that the fusion protein did not aggregate.
  • the in vention relates to GDF 15 fusion polypeptides and to the use of such fusion polypeptides to decrease appetite, promote weight loss, and treat obesity and other metabolic diseases.
  • the GDF 15 fusion polypeptides are contiguous polypeptide chains that include a GDF15 moiety and a serum albumin (SA) moiety.
  • SA and GDF15 moieties can be directly bonded to each other in the contiguous polypeptide chain, or preferably indirectly bonded to each other through a suitable linker.
  • the present application describes the determination of the X-ray crystal structure of the human mature GDF 15 protein, incorporating amino-acids 197-308 of SEQ ID NO: 1 .
  • the crystal structure reveals a disulfide -linked dimeric structure.
  • Each GDF 15 monomer adopts a fold similar to other TGFbeta superfamily cysteine knot proteins with a significant difference seen at the N-terminal.
  • the mature GDF 15 protein contains a total of nine cysteines all of which are disulfide bonded with Cys273, forming the inter-chain disulfide across the dimer interface.
  • the disulfide bonding pattern of the first four Cysteines is unique to GDF 15 when compared with TGFbeta and BMP family members. Cys203 and Cys210 (the first two cysteines in the mature protein) form a disulfide with each other to make a small loop structure protruding from the protein.
  • the remaining disulfides are structurally similar to the TGFbeta. family but are formed by Cys211-Cys274 (third and seventh cysteines), Cys240-Cys305 (fourth and eighth cysteines) and Cys244-Cys307 (fifth and ninth cysteines).
  • the crystal structure further revealed that there is an extensive peptide-peptide interface in the human GDF- 15 homodimer, with -1300 square Angstroms of buried surface area and involvement of 37 amino acids.
  • the crystal structure sho s that the following amino acids are involved in the peptide-peptide interface: Val216, Asp222, Leu223, Trp225, Val237, Met239, Ile241, Asn252, Met253, His254, Ile257, Lys258, Ser260, Leu261 , Leu264, Lys265, Thr268, Val269, Pro270, Cys273, Val275, Pro276, Tyr279, Tyr297, Asp299, Leu300 and Ile308.
  • the last amino-acid of the mature peptide, Ile308, is positioned fewer than 10 angstroms away from its dimer partner.
  • the knuckle domain was identified as being critical for function and the N-terminal domain, wrist domain, fingers domain, and back of hand domain were identified as potential sites for modification. It was determined that GDF15 fusion polypeptides in which a fusion partner is fused to the C-terminus or C- terminaliy to GDF15 are not effective in causing weight loss. In contrast, GDF15 fusion polypeptides in which a fusion partner (e.g., S ) is fused to the N-terminus or N-terminally to GDF15 have weight loss activity and were effective in causing weight loss in model systems. (See, exemplification). Accordingly, in the GDF15 fusion polypeptides disclosed herein, the SA portion is located at the N-terminus, or N-terminally to the GDF15 portion.
  • a fusion partner e.g., S
  • the fusion polypeptides described herein can contain any suitable SA moiety, any suitable GDF15 moiety, and if desired, any suitable linker.
  • the SA moiety, GDF15 moiety and, if present, linker are selected to provide a fusion polypeptide that has weight loss activity (e.g., in vivo) and to be immunologically compatible with the species to which it is intended to be administered.
  • weight loss activity e.g., in vivo
  • the SA moiety can be HSA or a functional variant thereof
  • the GDF15 moiety can be human GDF15 or a functional variant thereof.
  • SA and functional variants thereof and GDF15 and functional variants thereof that are derived from other species can be used when the fusion protein is intended for use in such species.
  • the GDF15 moiety is any suitable GDF15 polypeptide or functional variant thereof.
  • the GDF15 moiety is human GDF15 or a functional variant thereof.
  • Human GDF15 is synthesized as a 308 amino acid preproprotein (SEQ ID NO: l) that includes a signal peptide (amino acids 1-29), a propeptide (amino acids 30-196), and the 112 amino acid mature GDF15 peptide (amino acids 197-308 (SEQ ID NO:44)).
  • the propeptide and mature peptide have been reported as amino acids 30-194 and 195-308 of SEQ ID NO: l, respectively. (See, Uniproi sequence Q99988.) Sequence variations have been reported.
  • Fusion proteins of the present invention that contain a human GDFl 5 moiety generally contain the 112 amino acid mature GDFl 5 peptide (e.g., amino acids 197-308 of SEQ ID NO: 1, SEQ ID NO: 44) or a functional variant thereof.
  • the functional variant can include one or more amino acid deletions, additions or replacements in any desired combination.
  • the amount of amino acid sequence variation is limited to preserve weight loss activity of the mature GDFl 5 peptide.
  • the functional variant of a mature GDFl 5 peptide has from 1 to about 20, 1 to about 18, i to about 17, 1 to about 16, 1 to about 15, 1 to about 14, 1 to about 13, 1 to about 12, 1 to about 11, 1 to about 10, 1 to about 9, 1 to about 8, 1 to about 7, 1 to about 6, or 1 to about 5 ammo acid deletions, additions or replacements, in any desired combination, relative to SEQ ID NO:44.
  • the functional variant can have an amino acid sequence that has at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with SEQ ID NO:44, preferably when measured over the full length of SEQ ID NO:44.
  • GDFl 5 weight loss activity is mediated through cellular signaling initiated by the binding of GDF15 (and the fusion polypeptides described herein) to one or more receptors. While no receptor binding studies have been reported for GDFl 5, it is believed that GDFl 5 binds to and activates signaling through the Transforming Growth Factor Beta Type II receptor (TGFBR2). Accordingly, when the fusion polypeptide contains a functional variant of GDFl 5, any amino acid deletions, additions or replacements are preferably at positions that are not involved with receptor binding or with the intra-peptide interface and amino acid replacements are preferably conservative replacements.
  • amino acids at positions 216, 222, 223, 225, 237, 239, 241, 252, 253, 254, 257, 258, 260, 261, 264, 265, 268, 269, 270, 273, 275, 276, 279, 297, 299, 300 and 308 are involved in the peptide-peptide interface. Any amino acid replacements at these positions are generally disfavored, and any replacements should be conservative replacements. Amino acids that are surface exposed but are not conserved among species can generally be replaced with other amino acids without disrupting the folding of the peptide or its weight loss activity.
  • the inventors have determined the crystal structure of the human mature GDF15 peptide and identified the ammo acids at positions 217, 219, 226, 234, 243, 246, 2/47, 263, 265, 268, 277, 280, 287, 290, 303 and 304 as surface exposed residues that are not conserved in other species.
  • the amino terminal of mature human GDF 15 (amino acids 197-210 of SEQ ID NO: 1) and Cys203, Cys 210 and Cys273, which are not essential for weight loss activity, can generally be replaced with another ammo acid and/or omitted.
  • variants of human mature GDF15 peptide that are suitable for use in the fusion polypeptides include SEQ ID NO:44 in which one or more of the residues from position 1 to about 25 are replaced or deleted.
  • the variant can have the sequence of SEQ ID NO:44 in which the first 25, the first 15, the first 14, the first 13, the first 12, the first 11, the first 10, the first 9, the first 8, the first 7, the first 6, the first 5, the first 4, the first 3, the first 2, or the first 1 ammo acid is deleted.
  • Additional exemplar ⁇ ' variants of human mature GDF15 peptide that are suitable for use in the fusion polypeptides of the present invention include amino acids 197-308 of SEQ ID NO: 1 (SEQ ID NO:44) in which the Arg at position 198, Asn at position 199, or Arg at position 198 and Asn at position 199 are replaced with one or more other amino acids.
  • conservative amino acid replacements are preferred.
  • Arg at position 198 is replaced with His or Gly at position 199 is replaced with Ala or Glu.
  • Arg at position 198 is replaced with His and Asn at position 199 is replaced with Ala.
  • Mature human GDF 15 includes 9 cysteine residues, eight of which form intra- chain disulfide bonds in a pattern that is unique among TGFbeta superfamily members. Cys203, 210 and 273 are not required for weight loss activity and can be replaced with other amino acids or omitted if desired. Mutations of other cysteines in mature human GDF15 resulted in decreased or lost activity.
  • the SA moiety is any suitable serum albumin (e.g., human serum albumin (HSA), or serum albumin from another species) or a functional variant thereof.
  • the SA moiety is an FISA or a functional variant thereof.
  • the S A moiety prolongs the serum half -life of the fusion polypeptides to which it is added, in comparison to wild type GDF15. Methods for pharmacokinetic analysis and determination of seram half-life will be familiar to those skilled in the art. Details may be found in Kenneth, A et al: Chemical Stability of Pharmaceuticals: A Handbook for Pharmacists and in Peters et al, Pharmacokinetc analysis: A Practical Approach (1996).
  • HSA may comprise the full length sequence of 585 amino acids of mature naturally occurring HSA (following processing and removal of the signal and propeptides (SEQ ID NO:45)) or naturally occurring variants thereof, including allelic variants.
  • Naturally occurring HSA and variants thereof are well-known in the art. (See, e.g., Meloun, el al, FEES Letters 58: 136 (1975); Behrens, et al, Fed. Proc. 34:591 (1975); Lawn, et al, Nucleic Acids Research 9:6102-6114 (1981); Mmghetti, et al., J. Biol. Chem.
  • Fusion proteins that contain a human serum albumin moiety generally contain the 585 ammo acid HSA (amino acids 25-609 of SEQ ID NQ:2, SEQ ID NO: 45) or a functional variant thereof.
  • the functional variant can include one or more amino acid deletions, additions or replacement in any desired combination, and includes functional fragments of HSA.
  • the amount of amino acid sequence variation is limited to preserve the serum half-life extending properties of HSA.
  • the functional variant of HSA for use in the fusion proteins disclosed herein can have an amino acid sequence that has at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with SEQ ID NQ:45, preferably when measured over the full length sequence of SEQ ID NO:45.
  • the functional variant of HSA can have from 1 to about 20, 1 to about 18, 1 to about 17, 1 to about 16, 1 to about 15, 1 to about 14, 1 to about 13, 1 to about 12, 1 to about 11, 1 to about 10, 1 to about 9, 1 to about 8, 1 to about 7, 1 to about 6, or 1 to about 5 amino acid deletions, additions or replacement, in any desired combination.
  • HSA for use in the fusion proteins disclosed herein may be at least 100 amino acids long, or at least 150 amino acids long, and may contain or consist of ail or part of a domain of HSA, for example domain I (amino acids 1-194 of SEQ ID NO:45), II (amino acids 195-387 of SEQ ID NO:45), or lll (ammo acids 388-585 of SEQ ID NO:45).
  • a functional variant of HSA may consist of or alternatively comprise any desired HSA domain combination, such as, domains I + II (amino acids 1-387 of SEQ ID N():45), domains II + III (amino acids 195-585 of SEQ ID N():45) or domains I + III (amino acids 1-194 of SEQ ID NO:45 + amino acids 388-585 of SEQ ID NO:45).
  • each domain of HSA is made up of two homologous subdomains, namely amino acids 1-105 and 120-194, 195-291 and 316-387, and 388-491 and 512-585 of domains I, ⁇ , and III respectively, with flexible inter-subdomain Sinker regions comprising residues Lysl06 to Glu 119, Giu292 to Vai315 and Glu492 to Ala511.
  • the SA moiety of the fusions proteins of the present invention contains at least one subdomain or domain of HSA.
  • Functional fragments of HSA suitable for use in the fusion proteins disclosed herein will contain at least about 5 or more contiguous amino acids of HSA, preferably at least about 10, at least about 15, at least about 20, at least about 25, at least about 30, at least about 50, or more contiguous amino acids of HSA sequence or may include part or all of specific domains of HSA.
  • the functional variant (e.g., fragment) of HSA for use in the fusion proteins disclosed herein includes an N-tenninal deletion, a C-terminal deletions or a combination of N-terminal and C-terminal deletions.
  • Such variants are conveniently referred to using the ammo acid number of the first and last amino acid in the sequence of the functional variant.
  • a functional variant with a C-terminal truncation can be ammo acids 1-387 of HSA (SEQ ID NO:45).
  • HSA and HSA variants include, for example full length mature HSA (SEQ ID NO:45) and fragments, such as amino acids 1-387, amino acids 54 to 61, amino acids 76 to 89, amino acids 92 to 300, amino acids 170 to 176, ammo acids 247 to 252, amino acids 266 to 277, amino acids 280 to 288, amino acids 362 to 368, amino acids 439 to 447, amino acids 462 to 475, amino acids 478 to 486, and amino acids 560 to 566 of mature HSA.
  • SEQ ID NO:45 full length mature HSA
  • fragments such as amino acids 1-387, amino acids 54 to 61, amino acids 76 to 89, amino acids 92 to 300, amino acids 170 to 176, ammo acids 247 to 252, amino acids 266 to 277, amino acids 280 to 288, amino acids 362 to 368, amino acids 439 to 447, amino acids 462 to 475, amino acids 478 to 486, and amino acids 560 to 566 of mature
  • HSA polypeptides and functional variants are disclosed in PCT Publication WO 2005/077042A2, which is incorporated herein by reference in its entirety.
  • Further variants of HSA such as amino acids 1-373, 1-388, 1-389, 1-369, 1 - 19 and fragments that contain amino acid 1 through amino acid 369 to 419 of HSA are disclosed in European Published Application EP322Q94A1, and fragments that contain 1-177, 1-200 and amino acid 1 through amino acid 178 to 199 are disclosed in European Published Application EP399666A 1.
  • the SA and GDF15 moieties described in this invention can be directly bonded to each other in the contiguous polypeptide chain, or preferably indirectly bonded to each other through a suitable linker.
  • the linker is preferably a peptide linker.
  • Peptide linkers are commonly used in fusion polypeptides and methods for selecting or designing linkers are well-known. (See, e.g., Chen X et al. Adv. Drug Deliv. Rev. 65(10): 135701369 (2013) and Wriggers W et al, Bwpolymers 80:736-746 (2005).)
  • Peptide linkers generally are categorized as i) flexible linkers, ii) helix forming linkers, and iii) cleavable linkers, and examples of each type are known in the art.
  • a flexible linker is included in the fusion polypeptides described herein.
  • Flexible linkers may contain a majority of amino acids that are sterically unhindered, such as glycine and alanine.
  • the hydrophiiic amino acid Ser is also conventionally used in flexible linkers.
  • flexible linkers include, polyglycines (e.g., (Gly) 4 and (Gly)s), polyalamnes poiy(Giy-Aia), and poly(Gly-Ser) (e.g., (Gly n -Ser n ) n or (Ser n -Gly a ) n , wherein each n is independent an integer equal to or greater than 1).
  • polyglycines e.g., (Gly) 4 and (Gly)s
  • poly(Gly-Ser) e.g., (Gly n -Ser n ) n or (Ser n -Gly a ) n , wherein each n is independent an integer equal to or greater than 1).
  • Peptide linkers can be of a suitable length.
  • the peptide linker sequence may be at least 1 , 2, 3, 4, 5, 6, 7, 8, 9, 10, 1 1 , 12, 13, 14, 15, 16, 17, 18, 19, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, or more amino acid residues in length.
  • a peptide linker can be from about 5 to about 50 amino acids in length; from about 10 to about 40 amino acids in length; from about 15 to about 30 amino acids in length; or from about 15 to about 20 amnio acids in length .
  • Variation in peptide linker length may retain or enhance activity, giving rise to superior efficacy in activity studies.
  • the peptide linker sequence may be comprised of a naturally, or non-naturally, occurring amino acids.
  • the ammo acids glycine and serine comprise the amino acids within the linker sequence.
  • the linker region comprises sets of glycine repeats (GSGi) n , where n is a positive integer equal to or greater than I (preferably 1 to about 20) (SEQ ID NO: 50). More specifically, the linker sequence may be GSGGG (SEQ ID NO:51 ). The linker sequence may be GSGG (SEQ ID NO:52).
  • the linker region orientation comprises sets of glycine repeats (SerGly ti, where n is a positive integer equal to or greater than 1 (preferably 1 to about 20) (SEQ ID NO:53).
  • a linker may contain glycine (G) and serine (S) in a random or preferably a repeated pattern.
  • the linker can be (GGGGS) n (SEQ ID NO:46), wherein n is an integer ranging from 1 to 20, preferably 1 to 4. In a particular example, n is 3 and the linker is GGGGSGGGGSGGGGS (SEQ ID NO: 47).
  • a linker may contain glycine (G), serine (S) and proline (P) in a random or preferably repeated pattern.
  • G glycine
  • S serine
  • P proline
  • the linker can be
  • n is an integer ranging from 1 to 20, preferably 1-4.
  • n is 1 and the linker is GPPGS (SEQ ID NO: 49).
  • the linker is not immunogenic when administered in a patient, such as a human.
  • linkers may be chosen such that they have low immunogenicity or are thought to have low immunogenicity.
  • the linkers described herein are exemplary, and the linker can include other amino acids, such as Glu and Lys, if desired.
  • the peptide linkers may include multiple repeats of, for example, (G 4 S) (SEQ ID NO:54), (G 3 S) (SEQ ID NO:55), (G 2 S) (SEQ ID NO:56)and/or (GlySer) (SEQ ID NO:57), if desired.
  • the peptide Sinkers may include multiple repeats of, for example, (SG 4 ) (SEQ ID NO: 58), (SG 3 ) (SEQ ID N():59), (SG 2 ) (SEQ ID NO:60) or (SerGly) (SEQ ID NO:51).
  • die peptide linkers may include combinations and multiples of repeating amino acid sequence units, such as (G 3 S)+(G 4 S)+(GlySer) (SEQ ID NO:55+SEQ ID NO:54+SEQ ID NO:57).
  • Ser can be replaced with Ala e.g., (G 4 A) (SEQ ID NO: 62) or (G 3 A) (SEQ ID NO:63).
  • the linker comprises the motif (EAAAK) thread, where n is a positive integer equal to or greater than 1, preferably 1 to about 20. (SEQ ID NO: 64)
  • peptide linkers may also include cleavable linkers.
  • the GDF15 fusion polypeptides described herein contain a GDFI5 moiety and an SA moiety, and optionally a linker.
  • the fusion polypeptide is a contiguous amino acid chain in which the SA moiety is located N-terminally to the GDF15 moiety.
  • the C-terminus of the SA moiety can be directly bonded to the N-tenninus of the GDF15 moiety.
  • the C-terminus of the SA moiety is indirectly bonded to the -terminus of the GDF15 moiety through a peptide linker.
  • the SA moiety and GDFI5 moiety can be from any desired species.
  • the fusion protein can contain SA and GDF15 moieties that are from human, mouse, rat, dog, cat, horse or any other desired species.
  • the SA and GDF15 moieties are generally from the same species, but fusion peptides in which the SA moiety is from one species and the GDF15 moiety is from another species (e.g., mouse SA and human GDF15) are also encompassed by this disclosure.
  • the fusion polypeptide comprises mouse serum albumin or functional variant thereof and mature human GDF15 peptide or functional variant thereof.
  • the fusion protein can have the amino acid sequence of any of SEQ ID NOS: 16, 18, 22, 24 and 34.
  • the SA moiety is an HSA or a functional variant thereof and the GDF15 rnoieiy is the mature human GDF peptide or a functional variant thereof.
  • the optional linker is preferably a flexible peptide linker.
  • the fusion polypeptide comprises
  • GDF 15 moiety selected from the group consisting of: human GDF15(197-308) (SEQ ID NO:44); human GDF15(21 1-308) (ammo acids 211 -308 of SEQ ID NO: 1); human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S); and human GDF15(197-308) (SEQ ID NO: 44) in which Cys273 is replaced with Ser (C273S).
  • the fusion polypeptide can further comprise a linker that links the C- terminus of the SA moiety to the N-terminus of the GDF 15 moiety.
  • the linker is selected from (GGGGS)n (SEQ ID NO:46) and (GPPGS)n (SEQ ID NO:48), wherein n is one to about 20.
  • Preferred linkers include ((GGGGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is 1, 2, 3 or 4.
  • the fusion polypeptide comprises HSA or a functional variant thereof, a linker, and mature human G.DF.15 polypeptide or a functional variant thereof and has an amino acid sequence that has at least about 90%, at least about 95%, at least about 96%, at least about 97%, at least about 98%, or at least about 99% amino acid sequence identity to any of SEQ ID NOs:20, 26, 28, 30, 32, 38, 40 and 42,
  • the fusion polypeptide has the amino acid sequence of SEQ ID NOs: 20, 26, 28, 30, 32, 38, 40 and 42,
  • the fusion polypeptide can contain additional amino acid sequence.
  • an affinity tag can be included to facilitate detecting and/or purifying the fusion polypeptide.
  • the invention also relates to nucleic acids that encode the fusion polypeptides disclosed herein, including vectors that can be used to produce the fusion polypeptides.
  • the nucleic acids are isolated and/or recombinant.
  • the nucleic acid encodes a fusion polypeptide in which HSA or a functional variant thereof is located N- terminally to human mature GDF15 or a functional variant thereof.
  • the nucleic acid can further encode a linker (e.g., a flexible peptide linker) that bonds the C-terminus of the HSA or a functional variant thereof to the N-terminus of human mature GDF15 or a functional variant thereof.
  • the nucleic acid can also encode a leader, or signal, sequence to direct cellular processing and secretion of the fusion polypeptide.
  • the nucleic acid encodes a fusion polypeptide in which the SA moiety is HSA or a functional variant thereof and the GD F15 moiety is the mature human GDF peptide or a functional variant thereof.
  • the optional linker is preferably a flexible peptide linker.
  • the nucleic acid encodes a fusion polypeptide that comprises A) an SA moiety selected from the group consisting of HSA(25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin; and
  • GDF 15 moiety selected from the group consisting of: human GDF15(197-308) (SEQ ID NO:44); human GDF 15 (211-308) (amino acids 211-308 of SEQ ID NO: !); human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S); and human GDF15(197-308) (SEQ ID NO:44) in which Cys273 is replaced with Ser (C273S).
  • the encoded fusion polypeptide can further comprise a linker that links the C-terminus of the SA moiety to the N-terminus of the GDF 15 moiety.
  • the linker is selected from (GGGGS)n and (GPPGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is one to about 20.
  • Preferred linkers include ((GGGGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is 1, 2, 3 or 4,
  • the nucleic acid has a nucleotide sequence that has at least about at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with any of SEQ ID NOS: 19, 25, 27, 29, 31, 37, 39 and 41, preferably when measured over the full length of SEQ ID NO: 19, 25, 27, 29, 31, 37, 39 or 41.
  • the nucleic acid has the nucleotide sequence of SEQ ID NO: 19, 25, 27, 29, 31 , 37, 39 or 4 .
  • the nucleic acid encoding a fusion polypeptide can be present in a suitable vector and after introduction into a suitable host, the sequence can be expressed to produce the encoded fusion polypeptide according to standard cloning and expression techniques, which are known in the art (e.g., as described in Sambrook, J., Fritsh, E. F., and Maniatis, T. Molecular Cloning: A Laborator - Manual 2 nd , ed., Cold Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 1989).
  • the invention also relates to such vectors comprising a nucleic acid sequence according to the invention.
  • a recombinant expression vector can be designed for expression of a GDF15 fusion polypeptide in prokaryotic (e.g., E. coli) or eukaryotic cells (e.g., insect cells, yeast cells, or mammalian cells).
  • Representative host cells include many E. colt strains, mammalian cell lines, such as CHO, CHO-K1, and HEK293; insect cells, such as Sf9 cells; and yeast cells, such as S. cerevisiae and . pastoris.
  • the recombinant expression vector can be transcribed and translated in vitro, for example using T7 promoter regulatory sequences and T7 polymerase and an in vitro translation system .
  • Vectors suitable for expression in host cells and cell-free in vitro systems are well known in the art.
  • a vector contains one or more expression control elements that are operably linked to the sequence encoding the fusion polypeptide.
  • Expression control elements include, for example, promoters, enhancers, splice sites, poly adenylation signals and the like.
  • U sually a promoter is located upstream and operably linked to the nucleic acid sequence encoding the fusion polypeptide.
  • the vector can comprise or be associated with any suitable promoter, enhancer, and other expression-control elements.
  • Such elements include strong expression promoters (e.g., a human CMV IE promoter/enhancer, an RSV promoter, SV40 promoter, SL3-3 promoter, MMTV promoter, or HIV LTR promoter, EF1 alpha promoter, CAG promoter) and effective poly (A) termination sequences.
  • strong expression promoters e.g., a human CMV IE promoter/enhancer, an RSV promoter, SV40 promoter, SL3-3 promoter, MMTV promoter, or HIV LTR promoter, EF1 alpha promoter, CAG promoter
  • Additional elements that can be present in a vector to facilitate cloning and propagation include, for example, an origin of replication for plasmid product in E. coli, an antibiotic resistance gene as a selectable marker, and/or a convenient cloning site (e.g., a polylinker).
  • host cells comprising the nucleic acids and vectors disclosed herein are provided.
  • the vector or nucleic acid is integrated into the host cell genome, which in other embodiments the vector or nucleic acid is extra-chromosomal. If desired the host cells can be isolated.
  • Recombinant cells such as yeast, bacterial (e.g., E. coli), and mammalian cells (e.g., immortalized mammalian cells) comprising such a nucleic acid, vector, or combinations of either or both thereof are provided.
  • cells comprising a non- integrated nucleic acid such as a plasmid, cosmid, phagemid, or linear expression element, which comprises a sequence coding for expression of a fusion polypeptide comprising the human serum albumin or the functional variant thereof and human GDF15 protein or a functional variant thereof, are provided,
  • a vector comprising a nucleic acid sequence encoding a GDF15 fusion polypeptide provided herein can be introduced into a host cell using any suitable method, such as by transformation, transfection or transduction. Suitable methods are well known in the art.
  • a nucleic acid encoding a fusion polypeptide comprising the human seram albumin or the functional variant thereof and human GDF15 protein or the functional variant thereof can be positioned in and/or delivered to a host cell or host animal via a viral vector. Any suitable viral vector can be used in this capacity.
  • the invention also provides a method for producing a fusion polypeptide as described herein, comprising maintaining a recombinant host cell comprising a recombinant nucleic acid of the invention under conditions suitable for expression of the recombinant nucleic acid, whereby the recombinant nucleic acid is expressed and a fusion polypeptide is produced.
  • the method further comprises isolating the fusion polypeptide.
  • the invention also relates to methods for decreasing appetite, decreasing body weight and treating metabolic diseases in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • the invention also relates to methods for treating type 2 diabetes mellitus, obesity, pancreatitis, dyslipidemia, nonalcoholic steatohepatitis, insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders or body weight disorders in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • a GDF15 fusion polypeptide usually in the form of a pharmaceutical composition
  • the invention relates to a methods for treating genetic obesity in a subject in need thereof, such as a subject with Prader-Willi syndrome, leptin mutations and/or melanocortin 4 receptor mutations, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
  • a GDF15 fusion polypeptide usually in the form of a pharmaceutical composition
  • Type II diabetes can also give rise to several other serious health problems, such as diabetic neuropathy, diabetic nephropathy, and diabetic retinopathy.
  • Subjects in need of therapy using a fusion polypeptide as described herein are generally overweight or obese. Generally, an adult human is considered to be overweight if he has a body mass index (BMI) between 25 and 29.9, and is considered to be obese if he has a BMI of 30 or higher.
  • BMI body mass index
  • Subjects who are at increased risk of developing a metabolic diseases are also candidates for therapy using a fusion polypeptide as described herein.
  • subjects with pre-diabetes or an elevated fasting blood glucose level of 100 to 125 mg/dL are candidates for therapy, as are subjects with type II diabetes (those with fasting blood glucose levels of 126 mg/dL or higher).
  • fusion polypeptide An effective amount of the fusion polypeptide, usually in the form of a pharmaceutical composition, is administered to a subject in need thereof.
  • the fusion polypeptide can be administered in a single dose or multiple doses, and tlie amount administered and dosing regimen will depend upon the particular fusion protein selected, the severity of the subject's condition and other factors. A clinician of ordinary skill can determined appropriate dosing and dosage regimen based on a number of other factors, for example, the individual's age, sensitivity, tolerance and overall well-being.
  • the administration can be performed by any suitable route using suitable methods, such as parenterally (e.g., intravenous, subcutaneous, intraperitoneal,
  • intramuscular, intrathecal injections or infusion orally, topically, intranasal ly or by inhalation.
  • Parental administration is generally preferred.
  • Subcutaneous administration is preferred.
  • the GDF15 fusion polypeptides of the present invention can be administered to tlie subject in need tliereof alone or with one or more other agents.
  • tlie agents can be administered concurrently or sequentially to provide overlap in the therapeutic effects of the agents.
  • agents that can be administered in combination with the fusion polypeptide include:
  • Antidiabetic agents such as insulin, insulin derivatives and mimetics
  • insulin secretagogues such as the sulfonylureas (e.g. , chlorpropamide, tolazamide, acetohexamide, tolbutamide, glyburide, glimepinde, glipizide); glyburide and Amaryl
  • insulinotropic sulfonylurea receptor ligands such as meglitinides, e.g.
  • thiazolidinediones e.g., rosiglitazone (AVANDIA), troglitazone (REZULIN), pioglitazone (ACTOS), balaglitazone, rivoglitazone, netoglitazone, troglitazone, englitazone, ciglitazone, adaglitazone, darglitazone that enhance insulin action (e.g., by insulin sensitization), thus promoting glucose utilization in peripheral tissues; protein tyrosine phosphatase- IB (PTP-1B) inhibitors such as PTP-112; Cholesteryl ester transfer protein (CETP) inhibitors such as torcetrapib, GSK3 (glycogen synthase kinase-3) inhibitors such as SB-517955, SB-4195052, SB-216763, NN-57-05441 and IMN-57-05445; RX
  • Hypolipidemic agents such as 3-hydroxy-3-methyl-glutaryl coenzyme A (HMG-CoA) reductase inhibitors, e.g. lovastatin, pravastatin, simvastatin, pravastatin, cerivastatin, mevastatin, velostatin, fluvastatin, dalvastatin, atorvastatin, rosuvastatin and rivastatin; squalene synthase inhibitors; FXR (farnesoid X receptor) and LXR (liver X receptor) ligands; bile acid sequenstrants, such as cholestyramine and colesevelam; tibrates; nicotinic acid and aspirin;
  • HMG-CoA 3-hydroxy-3-methyl-glutaryl coenzyme A reductase inhibitors
  • lovastatin e.g. lovastatin, pravastatin, simva
  • Anti -obesity agents such as orlistat, rimonabant, phentermine, topiramate, qunexa, and locaserin;
  • Anti-hypertensive agents e.g. loop diuretics such as ethacrynic acid, furosemide and torsemide; angiotensin converting enzyme (ACE) inhibitors such as benazepril, captopril, enaiaprii, fosinopni, iisinoprii, moexipril, perinodopril, quinapril, ramipril and trandolapril; inhibitors of the Na-K-ATPase m em brane pump such as digoxin; neutralendopeptidase (NEP) inhibitors; ACE/NEP inhibitors such as omapatrilat, sampatrilat and fasidotril; angiotensin II antagonists such as candesartan, eprosartan, irbesartan, losartan, telmisartan and valsartan, in particular
  • ACE an
  • Agonists of peroxisome proliferator-activator receptors such as fenofibrate, pioglitazone, rosiglitazone, tesaglitazar, BMS-298585, L-796449, the compounds specifically described in the patent application WO 2004/103995 i.e. compounds of examples 1 to 35 or compounds specifically listed in claim 21, or the compounds specifically described in the patent application WO 03/043985 i.e. compounds of examples 1 to 7 or compounds specifically listed in claim 19 and especially (R)-l- ⁇ 4-[5-methyl-2-(4- trifluoromethyl-pheny1) ⁇ oxazol ⁇ 4 ⁇ ylmem ⁇
  • the invention also relates to pharmaceutical compositions comprising a GDF15 fusion polypeptide as described herein (e.g., comprising a fusion polypeptide comprising human serum, albumin or a functional variant thereof and human GDF15 protein or a functional variant thereof).
  • Such pharmaceutical compositions can comprise a
  • the carrier is generally selected to be suitable for the intended mode of administration and can include agents for modifying, maintaining, or preserving, for example, the H, osmolality, viscosity, clarity, color, isotonicity, odor, sterility, stability, rate of dissolution or release, adsorption, or penetration of the composition.
  • these carriers include aqueous or alcoholic/aqueous solutions, emulsions or suspensions, including saline and/or buffered media.
  • Suitable agents for inclusion in the pharmaceutical compositions include, but are not limited to, amino acids (such as glycine, glutamine, asparagine, arginine, or lysine), antimicrobials, antioxidants (such as ascorbic acid, sodium sulfite, or sodium hydrogen - sulfite), buffers (such as borate, bicarbonate, Tris-HCl, citrates, phosphates, or other organic acids), bulking agents (such as mannitol or glycine), chelating agents (such as
  • EDTA ethylenediamine tetraacetic acid
  • complexing agents such as caffeine
  • polyvinylpyrrolidone beta-cyclodextrin, or hydroxypropyl-beta-cyclodextrin
  • fillers monosaccharides, disaccharides, and other carbohydrates (such as glucose, mannose, or dextrins), proteins (such as free serum albumin, gelatin, or immunoglobulins), coloring, flavoring and diluting agents, emulsifying agents, hydrophilic polymers (such as
  • polyvinylpyrrolidone low molecular weight polypeptides
  • salt-forming counterions such as sodium
  • preservatives such as benzalkomum chloride, benzoic acid, salicylic acid, thimerosal, phenethyl alcohol, methviparaben, propylparaben, chlorhexidine, sorbic acid, or hydrogen peroxide
  • solvents such as glycerin, propylene glycol, or polyethylene glycol
  • sugar alcohols such as mannitol or sorbitol
  • suspending agents such as pluronics; PEG; sorbitan esters; polysorbates such as Polysorbate 20 or Polysorbate 80; Triton; tromethamine; lecithin; cholesterol or tyloxapal
  • stability enhancing agents such as sucrose or sorbitol
  • tonicity enhancing agents such as alkali metal haiides, such as sodium or potassium chloride, or mannitol
  • Parenteral vehicles include sodium chloride solution, Ringer's dextrose, dextrose and sodium chloride and lactated Ringer's. Suitable physiologically-acceptable thickeners such as carboxymethylcellulose, polyvinylpyrrolidone, gelatin and alginates may be included.
  • Intravenous vehicles include fluid and nutrient replenishes and electrolyte replenishes, such as those based on Ringer's dextrose. In some cases it will be preferable to include agents to adju st tonicity of the composition, for example, sugars, polyalcohols such as mannitol, sorbitol, or sodium chloride in a pharmace tical composition.
  • composition is substantially isotonic.
  • Preservatives and other additives such as antimicrobials, antioxidants, chelating agents and inert gases, may also be present.
  • the precise formulation will depend on the route of administration. Additional relevant principle, methods and components for pharmaceutical formulations are well known. ( See, e.g., Allen, Loyd V. Ed, (2012) Remington's Pharmaceutical Sciences, 22th Edition)
  • the pharmaceutical compositions are usually in the form of a sterile, pyrogen-free, parenterally acceptable composition.
  • a particularly suitable vehicle for parenteral injection is a sterile, isotonic solution, properly preserved.
  • the pharmaceutical composition can be in the form of a lyophilizate, such as a lyophilized cake.
  • the pharmaceutical composition is for subcutaneous administration.
  • suitable formulation components and methods for subcutaneous administration of polypeptide therapeutics are known in the art. See, e.g., Published United States Patent Application No 201 1/0044977 and US Patent No. 8,465,739 and US Patent No. 8,476,239.
  • the pharmaceutical compositions for subcutaneous administration contain suitable stabilizers (e.g, amino acids, such as methionine, and or saccharides such as sucrose), buffering agents and tonicifying agents.
  • amino acid mimetic refers to chemical compounds that have a structure that is different from the general chemical structure of an amino acid, but functions in a manner similar to a naturally occurring amino acid.
  • Atherosclerosis is a vascular disease characterized by irregularly distributed lipid deposits in the intima of large and medium-sized arteries, sometimes causing narrowing of arterial lumens and proceeding eventually to fibrosis and calcification. Lesions are usually focal and progress slowly and intermittently. Limitation of blood flow accounts for most clinical manifestations, which vary with the distribution and severity of lesions.
  • body weight disorder refers to conditions associated with excessive body weight and/or enhanced appetite.
  • Various parameters are used to determine whether a subject is overweight compared to a reference healthy individual, including the subject's age, height, sex and health status.
  • a subject may be considered overweight or obese by assessment of the subject's Body Mass Index (BMI), which is calculated by dividing a subject's weight in kilograms by the subject's height in meters squared.
  • BMI Body Mass Index
  • An adult having a BMI in the range of -18.5 to -24,9 kg/m is considered to have a normal weight; an adult having a BMI between -25 and -29.9 kg/m may be considered overweight (pre-obese); an adult having a BMI of -30 kg/m or higher may be considered obese.
  • Enhanced appetite frequently contributes to excessive body weight.
  • night eating syndrome which is characterized by morning anorexia and evening polyphagia often associated with insomnia, but which may be related to injury to the hypothalamus.
  • Cardiovascular diseases are diseases related to the heart or blood vessels.
  • Constant ammo acid replacements or substitutions refer to replacing one amino acid with another that has a side chain with similar size, shape and/or chemical characteristics.
  • conservative amino acid replacements include replacing one amino acid with another amino acid within the following groups: 1) Alanine (A), Glycine (G); 2) Aspartic acid (D), Glutamic acid (E): 3) Asparagme (N), Glutamine (Q); 4) Arginine (R), Lysine (K); 5) Isoleucine (I), Leucine (L), Methionine (M), Valine (V); 6) Phenylalanine (F), Tyrosine (Y), Tryptophan (W); 7) Serine (S), Threonine (T); and 8) Cysteine (C), Methionine (M).
  • Diabetes also called coronary artery' disease, is a narrowing of the small blood vessels that supply blood and oxygen to the heart.
  • Diabetes complications are problems caused by high blood glucose levels, with other body functions such as kidneys (nephropathies), nerves (neuropathies), feet (foot ulcers and poor circulation) and eyes (e.g. retinopathies). Diabetes also increases the risk for heart disease and bone and joint disorders. O ther long-term complications of diabetes include skin problems, digestive problems, sexual dysfunction and problems with teeth and gums.
  • Dyslipidemia is a disorder of lipoprotein metabolism, including lipoprotein overproduction or deficiency. Dyslipidemias may be manifested by elevation of the total cholesterol, low-density lipoprotein (LDL) cholesterol and triglyceride concentrations, and a decrease in high-density lipoprotein (HDL) cholesterol concentration in the blood.
  • LDL low-density lipoprotein
  • HDL high-density lipoprotein
  • the term "effective amount” refers to is an amount sufficient to achieve the desired therapeutic effect, under the conditions of administration, such as an amount sufficient to decrease appetite, cause weight loss, decrease fat mass, decrease fasting glucose levels, insulin release, and/or food intake.
  • a "tlierapeutieally-effeetive amount" administered to a patient exhibiting, suffering, or prone to suffer from metabolic disorders is such an amount which causes an improvement in the pathological symptoms, disease progression, physiological conditions associated with or induces resistance to succumbing to the afore mentioned disorders.
  • “Functional variant” and “biologically active variant” refers to a polypeptide that contains an amino acid sequence that differs from a reference polypeptide (e.g., I ISA . human wild type mature GDF15 peptide) but retains desired functional activity of the reference polypeptide.
  • the amino acid sequence of a functional variant can include one or more amino acid replacements, additions or omissions relative to the reference polypeptide, and include fragments of the reference polypeptide that retain the desired activity.
  • a functional variant of SA prolongs the serum half-life of the fusion polypeptides described herein in comparison to the half-life of GDF15., while retaining the reference GDF15 (e.g., human GDF15) polypeptide's activity (e.g., weight loss, appetite suppressing, insulin release, insulin sensitivity, and/or fat mass reduction) activity .
  • GDF15 e.g., human GDF15
  • activity e.g., weight loss, appetite suppressing, insulin release, insulin sensitivity, and/or fat mass reduction
  • Polypeptide variants possessing a somewhat decreased level of activity relative to their wild- type versions can nonetheless be considered to be functional or biologically active polypeptide variants, although ideally a biologically active polypeptide possesses similar or enhanced biological properties relative to its wild-type protein counterpart (a protein that contains the reference ammo acid sequence).
  • glucose tolerance refers to the ability of a subject to control the level of plasma glucose and/or plasma insulin when glucose intake fluctuates.
  • glucose tolerance encompasses the subject's ability to reduce, within about 120 minutes, the level of plasma glucose back to a level determined before the intake of glucose.
  • Glucose intolerance or 'Impaired Glucose Tolerance (IGT) is a pre-diabetic state of dysglycemia that is associated with increased risk of cardiovascular pathology.
  • the pre-diabetic condition prevents a subject from moving glucose into cells efficiently and utilizing it as an efficient fuel source, leading to elevated glucose levels in blood and some degree of insulin resistance.
  • glucose metabolism disorder encompasses any disorder characterized by a clinical sy mptom or a combination of clinical symptoms that is associated with an elevated level of glucose and/or an elevated level of insulin in a subject relative to a healthy individual . Elevated levels of glucose and/or insulin may be manifested in the followingdiseases, disorders and conditions: hyperglycemia, type II diabetes, gestational diabetes, type I diabetes, insulin resistance, impaired glucose tolerance, hyperinsulinemia, impaired glucose metabolism, pre-diabetes, metabolic disorders (such as metabolic disease or disorder, which is also referred to as syndrome X), and obesity, among others.
  • the GDF15 conjugates of the present disclosure, and compositions thereof, can be used, for example, to achieve and/or maintain glucose homeostasis, e.g. , to reduce glucose level in the bloodstream and/or to reduce insulin level to a range found in a healthy subject.
  • Hyperglycemia refers to a condition in which an elevated
  • Hyperglycemia can be diagnosed using methods known in the art, including measurement of fasting blood glucose levels as described herein.
  • hyperinsulinemia refers to a condition in which there are elevated levels of circulating insulin when, concomitantly, blood glucose levels are either elevated or normal.
  • Hyperinsulinemia can be caused by insulin resistance which is associated with dyslipidemia such as high triglycerides, high cholesterol, high low-density lipoprotein (LDL) and low high-density lipoprotein (HDL); high uric acids levels; polycystic ovary syndrome; type II diabetes and obesity.
  • Hyperinsulinemia can be diagnosed as having a plasma insulin level higher than about 2 pU/mL.
  • Hypoglycemia also called low blood sugar, occurs when blood glucose level drops too low to provide enough energy for the body's activities.
  • Identity means, in relation to nucleotide or amino acid sequence of a nucleic acid or polypeptide molecule, the overall relatedness between two such molecules.
  • Calculation of the percent sequence identity (nucleotide or amino acid sequence identity) of two sequences can be performed by aligning the two sequences for optimal comparison purposes (e.g., gaps can be introduced in one or both of a first and a second nucleic acid or amino acid sequence for optimal alignment). The nucleotides or amino acids at corresponding positions are then compared. When a position in the first sequence is occupied by the same nucleotide or amino acid as the corresponding position in the second sequence, then the molecules are identical at that position.
  • the percent identity between the two sequences is a function of the number of identical positions shared by the sequences, taking into account the number of gaps, and the length of each gap, which needs to be introduced for optimal alignment of the two sequences.
  • the comparison of sequences and determination of percent identity between two sequences can be accomplished using a mathematical algorithm.
  • the percent identity between two sequences can be determined using methods such as those described by the National Center for Biotechnology information (http://www.ncbi .nlm.nih.gov/).
  • the percent identity between two sequences can be determined using Clustai 2.0 multiple sequence alignment program and default parameters. Larkin MA et ai. (2007) "Clustai W and Clustai X version 2.0.” Bioinformatics 23(21): 2947-2948.
  • Insulin resistance is defined as a state in which a normal amount of insulin produces a subnormal biologic response.
  • metabolic diseases includes but is not limited to obesity, T2DM, pancreatitis, dyslipidemia, nonalcoholic steatohepatitis (NASH), insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders.
  • diabetes includes but is not limited to obesity, T2DM, pancreatitis, dyslipidemia, nonalcoholic steatohepatitis (NASH), insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders.
  • NASH nonalcoholic steatohepatitis
  • metabolic disease or disorder refers to an associated cluster of traits that includes, but is not limited to, hyperinsulinemia, abnormal glucose tolerance, obesity, redistribution of fat to the abdominal or upper body compartment, hypertension, dyslipidemia characterized by high triglycerides, low high density lipoprotein (HDL)-cholesterol, and high small dense low density lipoprotein (LDL) particles.
  • Subjects having metabolic disease or disorder are at risk for development of Type 2 diabetes and, for example, atherosclerosis.
  • Methodabolic syndrome can be defined as a cluster of risk factors that raises the risk for heart disease and other diseases like diabetes and stroke. These risk factors include: abdominal fat— in most men a wais hip ratio >0.9 or BMI > 30 kg/m2; high blood sugar— at least 1 10 milligrams per deciliter (mg/dl) after fasting; high triglycerides ⁇ at least 150 mg/dL in the bloodstream; low HDL— less than 40 mg/dl; and, blood pressure of 130/85 mmHg or higher (World Health Organization).
  • Hie fusion polypeptides include a GDF15 moiety, which contains an amino acid sequence derived from GDF15, and an SA moiety, which contain an amino acid sequence derived from SA.
  • the fusion protein optionally contains a linker moiety, which links the DGF15 moiety and the SA moiety, in the fusion polypeptide.
  • Naturally occurring when used in connection with biological materials such as nucleic acid molecules, polypeptides, host cells, and the like, refers to materials that are found in nature and are not manipulated by man.
  • non-naturally occurring refers to a material that is not found in nature or that has been structurally modified or synthesized by man.
  • naturally occurring refers to the bases adenine (A), cytosine (C), guanine (G), thymine (T), and uracil (U).
  • the term "naturally occurring” refers to the 20 conventional ammo acids (i.e., alanine (A), cysteine (C), aspartic acid (D), glutamic acid (E), phenylalanine (F), glycine (G), histidine (H), isoleucine (I), lysine (K), leucine (L), methionine (M), asparagine (N), proline (P), glutamine (Q), arginine (R), serine (S), threonine (T), valine (V), tryptophan (W), and tyrosine (Y)), as well as selenocysteine, pyrrolysine (PYL), and pyrroline-carboxy-lysine (PCL),
  • NASH Nonalcoholic steatoliepatitis
  • Obsity in terms of the human subject, can be defined as an adult with a Body Mass Index (BMI) of 30 or greater (Centers for Disease Control and Prevention).
  • Pantcreatitis is inflammation of the pancreas.
  • the terms "variant,” “mutant,” as well as any like terms, when used in reference to GDF15 or SA or specific versions thereof define protein or polypeptide sequences that comprise modifications, truncations, or other variants of naturally occurring (i.e., wild-type) protein or polypeptide counterparts or corresponding native sequences.
  • “Variant GDF15” or “GDF15 mutant,” for instance, is described relative to the wild-type (i.e., naturally occurring) GDF15 protein as described herein and known in the literature.
  • a "subject” is an individual to whom a fusion polypeptide is administered.
  • the subject is preferably a human, but “subject” includes pet and livestock animals, such as cows, sheep, goats, horses, dogs, cats, rabbits, guinea pigs, rats, mice or other bovine, ovine, equine, canine, feline, rodent or murine species, poultry and fish.
  • '"Type 2 diabetes mellitus or "T2DM” is a condition characterized by excess glucose production and circulating glucose levels remain excessively high as a result of inadequate glucose clearance and the inability of the pancreas to produce enough insulin.
  • Constructs of albumin-human GDF15 fusion proteins were expressed in transiently transfected HE 293F ceils. Briefly, a liter of HEK293F cells 1 mg of DNA and 3 mg of linear 25 kDa polyethylenimine were mixed in 100 mL of medium, incubated at room temperature for 10 minutes, and then added to the cells. The cells were incubated for 5 days post transfection at 37°C at 125 rpm (50 mm throw) at 8% C0 2 at 80% humidity. The ceils were removed by centrifugation for 20 minutes at 6,000 x g at 4°C.
  • the supernatant was filtered through a 0.8/0,2 ⁇ membrane and buffer exchanged into 100 mM TRIS pH 8.0 by TFF.
  • the GDF15 constructs were captured on a Q Sepharose anion exchange column and eluted in a 10 column volume gradient from 0 - 400 mM NaCl in 100 mM TRIS pH 8.0.
  • the fractions containing GDF15 were further purified by size exclusion chromatography in IX DPBS, 1.47 mM KH 2 P0 4 , 8.06 mM ⁇ a>l IPO :- nowadays ! ⁇ (). 137.9 mM NaCl, 2.67 mM KC1.
  • the fractions containing GDF15 were flask frozen in liquid nitrogen and stored at -80°C.
  • the supernatant was filtered through a 0.8/0.2 um membrane.
  • 1 M citric acid pH 3 was added to the filtered supernatant to a final concentration of 135 mM, solid sodium chloride was added to a final concentration of 2 M, and the supernatant was filtered through a 0.22 um membrane.
  • 5 mL of phenyl sepharose resin were equilibrated in 100 mM citric acid, 2 M NaCl, pH 3 and added to the supernatant. The resin was incubated with the supernatant for 2 hours at room temperature and packed into a 5 cm gravity column .
  • the resm was washed with 20 mL of 100 mM citric acid, 2 M NaC!, pi 1 3; 20 mL of 100 mM citric acid, 1.5 M NaCl, pH 3; 100 mM citric acid, 1 M NaCl, pH 3: 100 mM citric acid, 0.5 M NaCl, pH 3; 100 mM citric acid, pH 3; 100 mM citric acid, 20% ethanol, pH 3: and 100 mM citric acid, 50% ethanoi, pH 3.
  • the washes containing no NaCl were pooled. 2 M TRIS base added to the phenyl sepharose pool to a final concentration of 180 mM yielding a final pH of 7.5.
  • the elution fractions containing GDF15 were combined, diluted 1: 10 into 25 mM bis-TRIS pH 5, and filtered through a 0.22 ⁇ membrane.
  • SP Sepharose cation exchange resin was added to the GDF 5 and incubated for 1 hour at room, temperature. The resin was packed into a gravity column and the flow-through was removed. The column was washed with 50 column volumes of 25 mM bis-TRIS pH 5 and eluted in 10 column volumes of 50 mM sodium phosphate, 150 mM NaCl pH 6.2.
  • E coli produced GDF15 was fused to a modified autoprotease P20 from Classical swine fever vims and expressed in inclusion bodies.
  • E. coli transformed with GDF15 plasmid DNA were grown for 60 hours at 30°C in ZYP-5052 auto induction medium (Studier F.W., Protein Expression and Purification 41 (2005) 207-234). The cell pellet was harvested by centrifugation for 30 minutes at 5,000 ⁇ g at 18°C.
  • the pellet was resuspended in 250 mL of 100 mM TRIS pH 8, 150 mM NaCl, 3 mM EOT A, 0.01% (v/v) Triton X-1G0, 1 mg/mL lysozyme and incubated for 20 minutes at room temperature, rotating. 250 mL of 100 mM TRIS pH 8, 150 mM NaCl, 20 mM CaCl 2 , 20 mM MgCl 2 , 0.25 mg/mL DNase I was added followed by an incubation for 20 minutes at room temperature, stirring. The pellet was centrifuged for 15 minutes at 5,000 ⁇ g at 18°C and the supernatant was discarded.
  • the pellet was resuspended in 500 rnL of 2% (v/v) Triton X-100 and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 15 minutes at 5,000 ⁇ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 mL of 500 mM NaCl and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 ⁇ g at 18°C and the supernatant was discarded.
  • the pellet was resuspended in 500 ml, of 100 mM TRIS pH 8, 150 mM NaCl, 20 mM CaCL, 20 mM MgCl 2 , 0.25 mg/mL DNase I and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 ⁇ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 rnL of 80% (v/v) ethanol and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 x g at 18°C and the supernatant was discarded.
  • the pellet was resuspended in 500 rnL 100 mM TRIS pH 8, 500 mM NaCl, 8 M urea and incubated for 1 hour at room temperature, rotating. 10 mL of Ni Sepharose High Performance resin were added and incubated at room temperature for 1 hour, rotating. The resin was packed into a gravity column and the flow- through was discarded. The resin was washed with 25 column volumes of 100 mM TRIS pH 8, 500 mM NaCl, 8 M urea the 25 column volumes of 100 mM TRIS pH 8, 1 M NaCl, 2 M urea.
  • the bound protein was eluted in 2 5 column volumes of 100 mM TRIS pH 8, 1 M NaCl, 2 M urea, 0.5 M imidazole.
  • the eluted protein was diluted 1 : 10 into 1 M TRIS-base, 1 M NaCl, 0.2 M histidine, 10 mM TCEP, pH 8.5.
  • the sample was stirred briefly to mix and incubated overnight at room temperature with no agitation.
  • the sample was loaded over a 6 gram HLB cartridge, washed in 100 mL of 0.1% (v/v) formic acid in water, and eluted in 50 mL of 0.1% (v/v) formic acid in isopropanol.
  • the HLB elution was diluted 1 :20 into 1 liter of 50 mM HEPES, 500 mM NaCl, 2 mM TCEP, 8 M urea, pH 7.6. 10 mL of Ni Sepharose High PerfoiTnance resin were added and incubated at room temperature for 1 hour, stirring. The resin was packed into a gravity column and the flow-though was saved. The Ni flow- though was loaded over a 6 gram HLB cartridge, washed in 100 mL of 0.1 % (v/v) formic acid in water, and eluted in 50 mL of 0.1% (v/v) formic acid in isopropanol .
  • the second HLB elution was diluted 1 :20 into 1 liter of 100 mM TRIS pH 8, 0.5 M urea, 2 mM oxidized glutathione, 2 mM reduced glutathione.
  • the sample was stirred briefly to mix and incubated overnight at room temperature with no agitation.
  • 100 mL of 5 M NaCl were added to make a final concentration of 500 mM and the sample was loaded over a 6 gram HLB cartridge.
  • the cartridge was washed with 100 mL of 0.1% (v/v) formic acid in water and eluted in 25 mL of 0.1% (v/v) formic acid in ethanoi.
  • the HLB elution was diluted 1 :4 by the addition of 75 mL of 50 mM bis-TRIS pH 4.8 and 1 mL of SP Sepharose resm was added .
  • the resin was incubated with the GDF15 for 1 hour at room temperature and the packed into a gravity column.
  • the resin was washed with 1 mL of 50 mM bis-TRIS pH 4.8 and eluted in 3 ⁇ 1 mL of PBS pH 6.4. Fractions 1 and 2 were combined, flash frozen in liquid nitrogen, and stored at -80°C.
  • mice All animal studies described in this document were approved by the Novartis Institutes for Biomedical Research Animal Care and Use Committee in accordance with local and federal regulations and guidelines.
  • Male mice (C57BL/6NTac) fed either a standard laboratory chow diet or a 60% fat diet (Research Diets D 124921) from 6- weeks of age onward were purchased from Taconic.
  • mice Upon arrival, mice were housed one animal per cage typically under a 12h: 12h reverse light-dark cycle. Animals all received a minimum of 1 week acclimation prior to any use.
  • Mice were typically studied between 3-5 months of age. Prior to being studied, mice were randomized (typically 1-day prior to the experimental period) based on body weight such that each group had a similar average body- weight .
  • mice were placed in fresh cages, and the old food removed. Approximately lh later and just prior to the dark cycle, mice received a subcutaneous dose of either vehicle (I X PBS) or a GDF15 analog at the indicated times. After all injections are completed, the mice were reweighed and a defined amount of food returned ( ⁇ 50g per mouse of standard chow or high-fat diet). Food intake and body weight were measured over the course of the study at the times indicated.
  • vehicle I X PBS
  • GDF15 analog a subcutaneous dose of either vehicle (I X PBS) or a GDF15 analog at the indicated times. After all injections are completed, the mice were reweighed and a defined amount of food returned ( ⁇ 50g per mouse of standard chow or high-fat diet). Food intake and body weight were measured over the course of the study at the times indicated.
  • Plasma GDF15 exposure In surrogate animals treated as described above, plasma was collected into EDTA coated tubes at the indicated times, and human GDF15 levels were measured by ELISA as per the manufacturer's instructions (R&D Systems Quantikine Human GDF15 Immunoassay ; DGD1 0). This assay does not recognize endogenous mouse GDF15.
  • Body composition In some animals, body composition was assessed by NMR (Broker Mini Spec Model LF90U) as per the manufacturer's instructions. The mass of fat tissue, lean tissue and free fluid was calculated using MiniSpec software V.2.59.rev.6.
  • GDF15 can cause or promote weight loss agent in mice.
  • characteristics of GDF15 make the naturally occurring peptide unsuitable for use as a therapeutic in humans, such as the short lived plasma half-life ( ⁇ lh) of the wild-type human peptide and poor expression levels in mammalian cells (Fairlie WD, et. al. Gene (2000) 254:67-76).
  • ⁇ lh short lived plasma half-life
  • the inventors solved the crystal structure of the protein .
  • the GDF15 crystal structure revealed a unique disulfide pattern for GDF15 compared to other members of the TGFbeta superfamily that contain the 9 conserved cysteine residues, such as TGFB 1-3 and inhibm beta (Galat A Ceil. Mol. Life Sci. (2011) 68:3437-3451).
  • mammalian expression vectors were constracted that encoded proteins where each of the conserved cysteine residues that make up the disulfide bonds were individually mutated to serine residues.
  • the expression constructs were delivered by hydrodynamic DNA injection to diet-induced obese mice as described in the Material and Methods section.
  • mice injected with the expression vector encoding naturally occurring GDF15 ate 31.1% less food and were 31.3% lighter 3 weeks post treatment compared to mice injected with the empty vector.
  • Mice receiving the expression vector encoding mutations at C203S, C210S, or C273S ate 27.9, 28.0, and 33.9% less food and weighed 25.5, 20.4, and 30.3% less, respectively, than the control mice receiving the empty vector.
  • Food intake and body weight were similar among empty vector treated mice and mice treated with an expression vector encoding C21 1S, C240S, C244S, C274S, C305S, or C307S.
  • mice injected with a vector encoding an N-terminal Fc-GDF15 fusion protein ate about 25% less food over the first two weeks than the empty vector treated mice; however, by week 3 Fc- GDF15 treated mice were eating similar amounts of food as controls. Body weights of Fc- GDF15 treated mice also initially decreased but then started to rebound such that by 4 weeks post injection, the Fc-GDF15 mice only weighed 9.8 percent less than empty vector treated mice. In contrast, mice injected with a vector encoding a C-terminal GDF15-Fc fusion protein consumed similar levels of food and gained weight exactly like empty vector treated mice throughout the duration of the experiment.
  • High plasma GDF15 levels were detected at I and 3 weeks post mjection for the mature GDF15 treated group (2,6 and 1.8 nM, respectively). Plasma GDF15 levels were 2.8 nM one week post dose but were undetectable 3 weeks post injection of the vector encoding Fc-GDF15. No GDF15 was detected at any time in mice treated with the GDF15-Fc expression vector. In summary, these data indicate that the C -terminal fusion of GDF15 was inactive, while N-terminal fusion of GDF15 was active. However, the loss of expression of GDF15 in the Fc-GDF15 fusion group suggests that Fc fusions to GDF15 may not be suitable therapeutics.
  • MSA-GDF15 Compared to vehicle treated animals, food intake was reduced by 34, 34, 42, and 25 percent in animals receiving MSA-GDF15 (197-308), MSA-GDF15 (197-308, C203S, C210S), MSA-GDF15 (197-308, C273S), and MSA-GDF15 (211 -308), respectively.
  • MSA-GDF15 Compared to vehicle treated animals, food intake was reduced by 34, 34, 42, and 25 percent in animals receiving MSA-GDF15 (197-308), MSA-GDF15 (197-308, C203S, C210S), MSA-GDF15 (197-308, C273S), and MSA-GDF15 (211 -308), respectively.
  • Fusion of albumin to the N-terminus of GDF 15 also greatly increased the plasma half-life compared to the mature GDF15.
  • the plasma half-life of mature GDF 15 was ⁇ lh while the plasma half-life of the N-terminal serum albumin-GDF 15 fusion proteins was ⁇ 50h.
  • Once weekly administration of MSA-GDF15 for 3 consecutive weeks greatly enhanced weight loss in obese mice compared to mature GDF15 at equivalent doses (0.6 nmol dimer/mouse, s.c). Twenty eight days after the first dose and 2.
  • MSA-GDF15 treated mice lost 12.8 percent of their starting body weight while, over the same duration, vehicle treated and GDF 15 treated mice increased their starting body weight by an additional 10.9% and 5.6%, respectively.
  • Analysis of body composition indicated that the weight loss induced by MSA-GDF15 is largely from fat mass with sparing of lean mass.
  • the fat mass of MSA-GDF 15 treated mice was 18.3% compared to 25.2% and 24.5% for vehicle and GDF15 treated mice, respectively.
  • Lean mass in MSA-GDF15 treated mice was 55.6% of their body weight compared 51.5% and 52% for vehicle treated and GDF15 treated mice, respectively.
  • HSA-GDF15 fusion was also biologically active. Obese mice receiving a single subcutaneous dose (3 mg/kg s.c.) of HSA-3x4GS-hGDF 15( 197-308) ate 31% less food over 24h than vehicle-treated controls while MSA-GDF15 treated mice ate 27% less than vehicle controls. HSA-GDF15 fusions with different peptide linkers between albumin and GDF15 were also biologically active. Obese mice were created with a single subcutaneous dose (3 mg/kg s.c.) of HSA-no linker-GDFiS, HSA-GGGGS-GDF15, HSA-GPPGS ate 22, 27, and 21% less food over 24 hours than vehicle treated mice. In summary, these data indicate that fusion of albumin to the N -terminus of GDF15 with various linkers are biologically active.
  • the ammo terminus of GDF15 contains proteolytic (R198) and deamidation sites (N199) that may adversely impact development (e.g., stability) of a therapeutic albumin- GDF15 fusion protein.
  • R198 proteolytic
  • N199 deamidation sites
  • -58% of the HSA-3x4GS- hGDFl 5(197-308) was proteolysed between residues R198 and N199 and that -67% of residue N 199 was deamidated.
  • no proteolysis or deamindation was observed at these sites when the albumin-GDF15 fusion protein was mutated to HSA ⁇ hGDF15(197- 308),R198H,N199A.
  • Body weight was reduced by 5.2, 4.4, and 3.2 in obese mice treated with HSA-hGDF15(197-308),R198H, HSA-hGDF15(197-308),N199E, or HSA- hGDF15(197-308),R.198H,N199A, respectively.
  • fusion proteins containing mutation of these post-translational modification sites in the amino terminus of GDF15 retain biological activity.
  • GDF15 contains the fingers domain, knuckle domain, wrist domain, the newly discovered N-terminal loop domain, and back-of-hand domain .
  • GDF15 analogs that disrupt the newly discovered amino-terminus region of GDF15 e.g. MSA- GDF15(211-308) and MSA-GDF15 (C203S, C210S), still retain biological activity- demonstrating that this loop is not required for activity.
  • the knuckle, finger, and wrist region of TGFbeta superfamily members are known to be important for receptor binding and signaling.
  • key surface residues were mutated to a large side-chain containing amino acid, arginine, to attempt to induce a loss of function.
  • MSA-GDF15 fusion proteins containing mutations in GDF15 residues leucine 294 (knuckle), aspartic acid 289 (fingers), giutamine 247 (wrist), and serine 278 (back of hand) were produced and then dosed subcutaneously to obese mice (3 mg/kg s.c).
  • MSA-GDF15 reduced food intake over the course of 7 days by 30% compared to vehicle control. Food intake was also reduced relative to control by the finger region mutant (D289R), the wrist mutant (Q247R), and the back of the hand mutant (S278R) by 22, 14, and 24%, respectively. In contrast, the knuckle region mutant (L294R) increased food intake by 17% relative to control.
  • Human CD8A signal peptide (uniprot P01732) (SEQ iD NO:4): MALPVTALLLPLALLLHAARP Modified mating factor alpha- 1 signal peptide (uniprot P01 149) (SEQ ID NQ:5):
  • VRASLEDLGW ADWVLSPREV QVTMCIGACP 3QFRAANMHA QI TSLHRL PDTVPAPCCV 240
  • VNKECCHGDL LECADDRAEL AKYMCENQAT ISSKLQTCCD KPLLKKAHCL SEVEHDTMPA 300
  • ggagactgataccct1ctgctctggg tgcttctgctgtggg gccaggatcc 54 aceggcgaagcccataagt.cggaaatcgcacatcggtacaacgcgctcggggaa 108 cagcacttcaaaggecttg cctgatcgcgttc cccaat ccttcaaaaggcc 162 tcgtacgatgaacatgctaagctcg tccaagagg tgaccg cttcg caaagact 216 tgtgtggccgatgagteggcagecaactgegacaagagcctccaca ctctcttc 270 ggagacaagctgtgcgcaa11cctaatctgcgcgagaattaeggggaactggc
  • NLFRLVRFEV 120 DVMCTAFHDN SETFLKKYLY EIARRHFYFY AFELLFFAKR YKAAFTECCQ AADKAACLLF 180 KLDELRDEGK A.SSA QRL C ASLQ FGERA F A AVARLS QRFP AEFAE S LVTDLT 240 VHTECCHGDL LECADDRADL AKYICENQDS ISS L ECCE KPLLEKSHCI AEVENDEMPA 300 DLPSLAADFV ESKDVCKNYA EAKDVFLGMF LYSYARRHPD YSWLLLRLA KTYETTLEKC 360 CAAADFHSCY AKYFDEFKFL YEEFQNLIKQ NCELFEQLGE YKFQNALLYR YTKKYFQYST 420 PTLVEV8PNL GKVGSKCCKH PEAKPMPCAE DYLSYV ' LNQL CVLHEKTPVS DPVTKCCTES 480 LVKRRFCF
  • caacccgat ggt get cat ccagaaaact gacact ggagt ct cact gcaaacg 2 60
  • gagaacttcaa gccctggtccbcatcgcc bbcgcccaat ccbccagcag bgt 162
  • NLPRLVRPEv 120 DVMCTAFHDN EETFLKKYLY EIARRHFYFY AFELLFFAKR YKAAFTECCQ AADKAACLLF 180 KLDELRDEGK A33AKQRLKC A3LQKFGERA FKAvv YARL3 Q FPKAEFAE Y3KLYTDLTK 240 VH SCCHGDL LSCADDRADL AKY CSNQDS ISSKLKECCE KFLLEKSHCI AEVENDEMFA 300 DJ.iPSLAADFV ESKDVCKNYA EAKDVFLGMF LYEYARRHFD YSSWLLLRIA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPQNLI Q NCELFEQLGE YKFQNALLVR YTKKVPQVST 420 PTLVSVSRNL G VGSKCCKH PSAKRMPGAS DYLSVVLNQL CVLHEKTFVS DRVTKCCTSS 480 LV RRFCFSA LE
  • EDHVKLVNEV TEFAKTCVAD ESAENCDKSL HTLFGDKLCT VATLRETYGE MADCCA QEP ERNECFLQHK DDNPNLPRLV RPEVDVMCTA FHDNEETFLK KYLYEIARRH PYFYAPELLF FAKRYKAAFT ECCQAAD AA CLLPKLDELR DEGKASSAKQ RLKCASLQKF GERAF AWAV ARLSQRFPKA EFAEVSKLVT DLTKVHTECC HGDLLECADD RADLA YICE NQDSISS LK ECCEKPLLEK SHCIAEVEND EMPADLPSLA ADFVESKDVC KNYAEAKDVF LGMFLYEYAR RHPDYSWLL LRKAKTYETT LEKCCAAADP HECYAKVFDE FKPLVEEPQN LIKQNCELFE QLGEYKFQNA LLVRYTKKVP QVSTPTLVEV SRNLGKVGSK CCKHPEAKRM PCAEDYLS

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Abstract

The disclosure relates to fusion polypeptides comprising serum albumin or a functional variant thereof and GDF15 protein or a functional variant thereof, and to pharmaceutical compositions that contain the fusion polypeptides, nucleic acids that encode the fusion polypeptides, methods of making the polypeptides and use of the polypeptides to decreasing appetite, decreasing body weight and treating metabolic diseases.

Description

HSA-GDF-15 FUSION POLYPEPTIDE AND USE THEREOF.
Figure imgf000002_0001
[0001 ] Obesity has reached near epidemic proportions, with an estimated 36% of the adult population considered obese or overweight. Obesity is a chronic disease associated with high morbidity and mortality. Obesity presents its own health problems, and is also associated with a variety of other diseases such as hypertension, hyper] ipidemia, diabetes mellitus, atherosclerosis, coronary artery disease, sleep apnea, gout, rheumatism and arthritis. About 80% of obese patients have the one or more of the above diseases (Mantzofos et al., J Clin Endocrinol Me Lab 2000; 85:4000-2), and approximately 300,000 people die each year due to complications from obesity (Allison et al., JAMA 1999; 282: 1 30-8). A weight gain of just i kg has been shown to increase cardiovascular risk by 3 , 1 % and diabetes risk by 4.5- 9%, and a weight loss of about 1 1% has been shown to reduce morbidity by 25%.
[0002] While most people can diet and lose weight, durable weight loss can be difficult to maintain, as calorie restriction results in activation of the hypothalamic neurons that promote food intake and weight regain. Therefore, many turn to surgical and/or medical approaches to achieve durable weight loss. However, surgical and medical therapies for obesity have limited efficacy and significant side effects. For example, bariatric surgery is a major surgical procedure with considerable risk of complications, and requires extensive lifestyle modification. Drug therapy for obesity (e.g., using phentermme and or topiramate) has limited efficacy and is further limited by side-effects.
[0003] Growth Differentiation Factor 15 (GDF15) is a divergent member of the ΤΟΡβ superfamily, and is also referred to as macrophage inhibitory cytokine 1 (Ml CI) (Bootcov MR, 1997, Proc Natl Acad Sci 94: 11514-9.), placental bone morphogenetic factor (PLAB) (Hromas R 1997, Biochim Biophys Acta. 1354:40-4), placental transforming growth factor beta (PTGFB) (Lawton LN 1997, Gene. 203: 17-26), prostate derived factor (PDF) (Paralkar VM 1998, J Biol Chem. 273: 13760-7), and nonsteroidal antiinflammatory drug-activated gene (NAG-1 ) (Back SI 2001. J Biol Chem. 276: 33384- 92). The mature GDF15 peptide shares low homology with other family members (Katoh M 2006, Int J Mol Med. 17:951 -5.). GDF15 is synthesized as a large precursor protein that is cleaved at the dibasic cleavage site to release the carboxyterminal mature peptide. Human full-length precursor contains 308 amino acids and is cleaved at the RGRRRAR (SEQ ID NO:43) cleavage site to produce the mature GDF peptide. Naturally occurring GDF15 is a 25KD homodimer of the mature peptide covalently linked by one inter-chain disulfide bond.
[0004] GDF 15 is reported to be relevant to a number of different physiological and pathologic conditions. For example, studies of GDF15 knockout and transgenic mice suggest that GDF 15 may be protective against ischemic/reperfusion- or overload-induced heart injury (KempfT, 2006, Circ i¾¾\98:35 i-60) (Xu J, 2006, Circ Res. 98:342-50), protective against aging-associated motor neuron and sensory neuron loss (Strelau J, 2009, J Neurosci. 29 : 13640-8), mildly protective against metabolic acidosis in kidney, and may cause cachexia in cancer patients (Johnen H 2007 Nat Med. 11 : 1333-40). GDF 15 is also reported to be protective against carcinogen- or Ape mutation- induced neoplasia in intestine and lung (Baek SJ 2006, Gastroenterology. 131 : 1553-60; Cekanova M 2009, Cancer Prev Res 2:450- 8),
[0005] GDF 15 has anorexigenic effects, particularly in cancer (Brown D. A. Clinical Cancer Res 2003; 9:2642-2650; Koopman J. Clinical Cancer Res 2006; 12:442-446). Substantial elevation of circulating MIC-1/GDF15 levels in cancers and other diseases such as chronic renal or cardiac failure are associated with a lower body mass index (Breit S.N. et al, Growth factors 201 1 ; 29: 187-195; Johnen H. et al, Nat Med. 2007; 13: 1333-1340), suggesting that apart from any role in inflammation in disease, M1C-1/GDF15 may also play a role in body weight regulation. Long-term elevated expression of MIC-1/GDF15 in mice leads to decreased food intake, body weight and adiposity with concomitantly improved glucose tolerance, both under normal and obesogenic dietary conditions (Macia L. et al, PloS One 2012; 7(4):e34868). Food intake and body weight are controlled by a variety of central and peripheral factors, but the exact mechanisms behind these processes are still not fully understood.
[0006] Human Serum Albumin (HSA) is a. plasma protein of about 66,500 KDa and is comprised of 585 amino acids, including at least 17 disulfide bridges. (Peters, T,, jr. (1996), All about Albumin: Biochemistry, Genetics and Medical, Applications, p lO, Academic Press, inc., Orlando (ISBN 0-12-552110-3). HSA has a long half-life and is cleared very slowly by the liver. The plasma half-life of HSA is reported to be approximately 19 days (Peters, !'., Jr. (1985) <*>. Protein Chem. 37, 161-245; Peters, T,, jr. (1996) Ail about Albumin, Academic Press, inc., San Diego, CA. (page 245-246)); Benotti P, Blackburn GL: Grit Care Med (1979) 7:520-525).
[0007 ] HSA has been used to produce fusion proteins that have improved shelf and half- iifes. For example, PCX Publications WO 01/79271 A and WO 03/59934 A disclose a albumin fusion proteins comprising a variety of therapeutic protein (e.g., growth factors, scFvs) and HSA that are reported to have longer shelf and half-lifes than the therapeutic proteins alone. [0008] PCT Publication WO 13/1 13008 A discloses GDF15-Fc fusions tor treatment or amelioration of metabolic disorders including obesity. This patent application reports efficacy of GDF15-Fc fusion in obese mice and overweight monkeys.
[0009] There is a need for new therapeutic agents for the treatment of obesity. (See, e.g., Arbeeny et al., Obes Res 2004; 12: 1191-6). There is a particular need for improved GDF15 fusion proteins that are active and have improved therapeutic properties, such as a longer serum half-life than naturally occurring GDF15 and that are stable.
SUMMARY OF THE INVENTION
[0010] The present invention relates to fusion polypeptides comprising the Human Serum Albumin (HSA) or a functional variant thereof and the human GDF15 or a functional variant thereof.
[0011] The fusion polypeptides comprise a first moiety, a second moiety and optionally a linker that links the first moiety to the second moiety. The first moiety can be human serum albumin (HSA) or a functional variant thereof, the second moiety is human GDF15 protein or a functional variant thereof; and the first moiety is amino terminal to the second moiety.
[0012] The fi rst moiety can have at least about 80% sequence identity to mature HSA (SEQ ID NO:45). For example, the first moiety can be mature HSA (SEQ ID NO:45). In other examples, the first moiety is a functional variant of HSA, such as a portion of HSA as described herein, or mature HSA in which one or more amino acids is replaced with another amino (e.g., C34S and N503Q).
[0013] In some aspects, the fusion polypeptides contains a first moiety is selected from the group consisting of HSA (25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin; and a second moiety is selected from the group consisting human mature GDF15 peptide (197-308) (SEQ ID NO:44), human GDF15(211-308) (amino acids 211-308 of SEQ ID NO: 1), human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S), human GDF15(97-308) (SEQ ID NO:44) in which Cys273 is replaced with Ser (C273S).
[0014] In some fusion polypeptides, such as those in which the first moiety is mature HSA (SEQ ID NO:45) the second moiety includes a functional variant of GDF15 (SEQ ID NO:44), such as a variant in which the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg, the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 199 of SEQ ID NO: 1 is not Asn; or the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg and the amino acid residue that corresponds to position 199 of SEQ ID NO: 1 is not Asn. In a particular example, the fusion polypeptides contains a second moiety in which the ammo acid that corresponds to position 198 in human GDF15 is His and amino acid that corresponds to position 199 in human GDF15 is Ala.
[0015] If desired, the second moiety in the fusion polypeptide can additionally or alternatively comprises an amino acid replacement or deletion of one or more surface exposed residues, one or more N-terminal amino acids (amino acids 197-210), Cys 203, Cys 210 and/or Cys273. Amino acid residues that are surface exposed on GDF15 include Arg217, Ser219, AIa226, Glu234, Ala243, Ser246, Gln247, Arg263, Lys265, Thr268, Ala277, Asn280, Lys287, Thr290, Lys303 and Asp304.
[0 16] In certain aspects the fusion polypeptides further comprises a linker that links the first moiety and the second moiety . For example, the linker can be sequence selected from the group consisting of (GGGGS)n and (GPPGS)n, wherein n is one to about 20. In particular embodiments, the linker is (GGGGS)n, and n is 3.
[0017] In more particular embodiments, the fusion polypeptide has an amino acid sequence selected from the group consisting of SEQ ID NOS:20, 26, 28, 30, 32, 38, 40 and 42. The fusion polypeptide can be a homodimer, heterodimer or monomer, and is preferably a homodimer or monomer.
[0018] In other aspects, the invention relates to a nucleic acid molecule (e.g., an isolated nucleic acid molecule), including DNA and RNA molecule and expression vectors, that encodes a fusion polypeptide as described herein . The invention also relates to a host cell comprising a recombinant nucleic acid that encodes a fusion polypeptide as described herein. The invention also relates to a method for making an a fusion polypeptide as described herein, comprising maintaining a host cell of the invention under conditions suitable for expression of the nuclei c acid, whereby the recombinant nucleic acid is expressed and the fusion polypeptide is produced. If desired, the method can further comprise isolating the fusion polypeptide.
[0019] The invention also relates to a pharmaceutical composition comprising a fusion polypeptide as described herein and a pharmaceutically or physiologically acceptable carrier. Preferred pharmaceutical compositions are for subcutaneous administration,
[0020] The invention also relates to methods for decreasing appetite, decreasing body weight and treating metabolic diseases in a subject in need thereof, said method comprising administering to the subject in need thereof an effecti ve amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein. In some aspects, the invention relates to methods for treating type 2 diabetes mellitus, obesity, pancreatitis, dvslipidemia, nonalcoholic steatohepatitis, insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders or body weight disorders in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein. In particular aspects, the invention relates to a methods for treating genetic obesity in a subject in need thereof, such as a subject with Prader-Willi syndrome, leptin mutations and/or melanocortin 4 receptor mutations, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein.
[0021] The invention also relates to the use of a fusion polypeptide as described herein for use in therapy and in the manufacture of a medicament for treating a disease or condition as disclosed herein (e.g., decreasing appetite, decreasing body weight and treating metabolic diseases).
BRIEF DESCRIPTION OF THE DRAWINGS
[0022] Figs, la and lb are images of polyacrylamide gels in which Fc-GDF15 fusion protein (Fig. la) or mouse serum Albumin-GDF15 fusion proteins (Fig. lb) were run under non-reducing and reducing conditions. Fig. la shows that a large proportion of the fusion protein (SEQ ID NO:36) migrated close to the origin under non-reducing conditions, indicating that the fusion protein aggregated. Fig. lb. shows that the albumin fusion protein (SEQ ID NO: 16) migrated at the expected molecular weight under non-reducing conditions, indicating that the fusion protein did not aggregate. DETAILED DESCRIPTION OF THE INVENTION
[0023 ] The in vention relates to GDF 15 fusion polypeptides and to the use of such fusion polypeptides to decrease appetite, promote weight loss, and treat obesity and other metabolic diseases. The GDF 15 fusion polypeptides are contiguous polypeptide chains that include a GDF15 moiety and a serum albumin (SA) moiety. The SA and GDF15 moieties can be directly bonded to each other in the contiguous polypeptide chain, or preferably indirectly bonded to each other through a suitable linker.
[0024] The present application describes the determination of the X-ray crystal structure of the human mature GDF 15 protein, incorporating amino-acids 197-308 of SEQ ID NO: 1 . The crystal structure reveals a disulfide -linked dimeric structure. Each GDF 15 monomer adopts a fold similar to other TGFbeta superfamily cysteine knot proteins with a significant difference seen at the N-terminal. The mature GDF 15 protein contains a total of nine cysteines all of which are disulfide bonded with Cys273, forming the inter-chain disulfide across the dimer interface. The disulfide bonding pattern of the first four Cysteines is unique to GDF 15 when compared with TGFbeta and BMP family members. Cys203 and Cys210 (the first two cysteines in the mature protein) form a disulfide with each other to make a small loop structure protruding from the protein.
[0025] The remaining disulfides are structurally similar to the TGFbeta. family but are formed by Cys211-Cys274 (third and seventh cysteines), Cys240-Cys305 (fourth and eighth cysteines) and Cys244-Cys307 (fifth and ninth cysteines). The crystal structure further revealed that there is an extensive peptide-peptide interface in the human GDF- 15 homodimer, with -1300 square Angstroms of buried surface area and involvement of 37 amino acids. The crystal structure sho s that the following amino acids are involved in the peptide-peptide interface: Val216, Asp222, Leu223, Trp225, Val237, Met239, Ile241, Asn252, Met253, His254, Ile257, Lys258, Ser260, Leu261 , Leu264, Lys265, Thr268, Val269, Pro270, Cys273, Val275, Pro276, Tyr279, Tyr297, Asp299, Leu300 and Ile308. The last amino-acid of the mature peptide, Ile308, is positioned fewer than 10 angstroms away from its dimer partner. Unusually for the superfamily, the electron density is consistent with the side-chain pointing toward the interior of the protein structure to form a hydrophobic pocket with Val275 and Pro276. Other family members have the carboxylic acid pointing toward the inside of the structure and the sidechain solvent exposed (ref TGFb3 (2PJY), BMP6(2R52), BMP7(1 LX5), GDF5(3EVS), GDF2(4FAO)). This suggests that GDF15 might be unique in its ability to accommodate longer peptide sequences at the COOH-termini without perturbation of its protein fold.
[0026] Utilizing the crystal structure residues forming the functional epitope responsible for receptor recruitment and subsequent signaling were identified as those comprising either the Fingers domain, knuckle domain, wrist domain, the newly discovered N-terminal domain, Carboxy-terminal domain or back-of-hand domain . Further, it was recognized that the addition of a fusion protein would be required to not interfere, directly or indirectly, with either the folding of the protein dimer nor with the functional epitope. A series of structure- guided site-directed mutants were designed to identify a) domains and residues whose alteration adversely affected GDF15 function and b) domains and residues amenable to modification. (See, exemplification) From these studies, the knuckle domain was identified as being critical for function and the N-terminal domain, wrist domain, fingers domain, and back of hand domain were identified as potential sites for modification. It was determined that GDF15 fusion polypeptides in which a fusion partner is fused to the C-terminus or C- terminaliy to GDF15 are not effective in causing weight loss. In contrast, GDF15 fusion polypeptides in which a fusion partner (e.g., S ) is fused to the N-terminus or N-terminally to GDF15 have weight loss activity and were effective in causing weight loss in model systems. (See, exemplification). Accordingly, in the GDF15 fusion polypeptides disclosed herein, the SA portion is located at the N-terminus, or N-terminally to the GDF15 portion.
[0027] The fusion polypeptides described herein can contain any suitable SA moiety, any suitable GDF15 moiety, and if desired, any suitable linker. Generally, the SA moiety, GDF15 moiety and, if present, linker are selected to provide a fusion polypeptide that has weight loss activity (e.g., in vivo) and to be immunologically compatible with the species to which it is intended to be administered. For example, when the fusion polypeptide is intended to be administered to humans the SA moiety can be HSA or a functional variant thereof, and the GDF15 moiety can be human GDF15 or a functional variant thereof.
Similarly, SA and functional variants thereof and GDF15 and functional variants thereof that are derived from other species (e.g., pet or livestock animals) can be used when the fusion protein is intended for use in such species.
GDF15 Moiety
[0028] The GDF15 moiety is any suitable GDF15 polypeptide or functional variant thereof. Preferably, the GDF15 moiety is human GDF15 or a functional variant thereof. Human GDF15 is synthesized as a 308 amino acid preproprotein (SEQ ID NO: l) that includes a signal peptide (amino acids 1-29), a propeptide (amino acids 30-196), and the 112 amino acid mature GDF15 peptide (amino acids 197-308 (SEQ ID NO:44)). The propeptide and mature peptide have been reported as amino acids 30-194 and 195-308 of SEQ ID NO: l, respectively. (See, Uniproi sequence Q99988.) Sequence variations have been reported. For example, amino acids 202, 269 and 288 (in SEQ ID NO: 1) have been reported to be Asp, Glu and Ala, respectively. (Hromas R, et al, Biochem. Biophys. Acta 1354:40-44 (1997), Lawton L.N. et al. Gene 203: 17-26 (1997).) [0029] Fusion proteins of the present invention that contain a human GDFl 5 moiety generally contain the 112 amino acid mature GDFl 5 peptide (e.g., amino acids 197-308 of SEQ ID NO: 1, SEQ ID NO: 44) or a functional variant thereof. The functional variant can include one or more amino acid deletions, additions or replacements in any desired combination. The amount of amino acid sequence variation (e.g., through amino acid deletions, additions or replacements) is limited to preserve weight loss activity of the mature GDFl 5 peptide. In some embodiments, the functional variant of a mature GDFl 5 peptide has from 1 to about 20, 1 to about 18, i to about 17, 1 to about 16, 1 to about 15, 1 to about 14, 1 to about 13, 1 to about 12, 1 to about 11, 1 to about 10, 1 to about 9, 1 to about 8, 1 to about 7, 1 to about 6, or 1 to about 5 ammo acid deletions, additions or replacements, in any desired combination, relative to SEQ ID NO:44. Alternatively or in addition, the functional variant can have an amino acid sequence that has at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with SEQ ID NO:44, preferably when measured over the full length of SEQ ID NO:44.
[0030] Without wishing to be bound by any particular theory, it has been suggested that GDFl 5 weight loss activity is mediated through cellular signaling initiated by the binding of GDF15 (and the fusion polypeptides described herein) to one or more receptors. While no receptor binding studies have been reported for GDFl 5, it is believed that GDFl 5 binds to and activates signaling through the Transforming Growth Factor Beta Type II receptor (TGFBR2). Accordingly, when the fusion polypeptide contains a functional variant of GDFl 5, any amino acid deletions, additions or replacements are preferably at positions that are not involved with receptor binding or with the intra-peptide interface and amino acid replacements are preferably conservative replacements. For example, the amino acids at positions 216, 222, 223, 225, 237, 239, 241, 252, 253, 254, 257, 258, 260, 261, 264, 265, 268, 269, 270, 273, 275, 276, 279, 297, 299, 300 and 308 are involved in the peptide-peptide interface. Any amino acid replacements at these positions are generally disfavored, and any replacements should be conservative replacements. Amino acids that are surface exposed but are not conserved among species can generally be replaced with other amino acids without disrupting the folding of the peptide or its weight loss activity. The inventors have determined the crystal structure of the human mature GDF15 peptide and identified the ammo acids at positions 217, 219, 226, 234, 243, 246, 2/47, 263, 265, 268, 277, 280, 287, 290, 303 and 304 as surface exposed residues that are not conserved in other species. In addition, the amino terminal of mature human GDF 15 (amino acids 197-210 of SEQ ID NO: 1) and Cys203, Cys 210 and Cys273, which are not essential for weight loss activity, can generally be replaced with another ammo acid and/or omitted.
[0031] Exemplary variants of human mature GDF15 peptide that are suitable for use in the fusion polypeptides include SEQ ID NO:44 in which one or more of the residues from position 1 to about 25 are replaced or deleted. For example, the variant can have the sequence of SEQ ID NO:44 in which the first 25, the first 15, the first 14, the first 13, the first 12, the first 11, the first 10, the first 9, the first 8, the first 7, the first 6, the first 5, the first 4, the first 3, the first 2, or the first 1 ammo acid is deleted.
[0032] Additional exemplar}' variants of human mature GDF15 peptide that are suitable for use in the fusion polypeptides of the present invention include amino acids 197-308 of SEQ ID NO: 1 (SEQ ID NO:44) in which the Arg at position 198, Asn at position 199, or Arg at position 198 and Asn at position 199 are replaced with one or more other amino acids. When amino acids are replaced, conservative amino acid replacements are preferred. In particular embodiments, Arg at position 198 is replaced with His or Gly at position 199 is replaced with Ala or Glu. In more particular embodiments Arg at position 198 is replaced with His and Asn at position 199 is replaced with Ala. [0033] Mature human GDF 15 includes 9 cysteine residues, eight of which form intra- chain disulfide bonds in a pattern that is unique among TGFbeta superfamily members. Cys203, 210 and 273 are not required for weight loss activity and can be replaced with other amino acids or omitted if desired. Mutations of other cysteines in mature human GDF15 resulted in decreased or lost activity.
SA Moiety
[0034] The SA moiety is any suitable serum albumin (e.g., human serum albumin (HSA), or serum albumin from another species) or a functional variant thereof. Preferably, the SA moiety is an FISA or a functional variant thereof. The S A moiety prolongs the serum half -life of the fusion polypeptides to which it is added, in comparison to wild type GDF15. Methods for pharmacokinetic analysis and determination of seram half-life will be familiar to those skilled in the art. Details may be found in Kenneth, A et al: Chemical Stability of Pharmaceuticals: A Handbook for Pharmacists and in Peters et al, Pharmacokinetc analysis: A Practical Approach (1996). Reference is also made to "Pharmacokinetics," M Gibaldi & D Perron, published by Marcel Dekker, 2na Rev. ex edition (1982), which describes pharmacokinetic parameters such as t alpha and t beta half-lives and area under the cun/e
( Λ i.;c}.
[0035] HSA may comprise the full length sequence of 585 amino acids of mature naturally occurring HSA (following processing and removal of the signal and propeptides (SEQ ID NO:45)) or naturally occurring variants thereof, including allelic variants. Naturally occurring HSA and variants thereof are well-known in the art. (See, e.g., Meloun, el al, FEES Letters 58: 136 (1975); Behrens, et al, Fed. Proc. 34:591 (1975); Lawn, et al, Nucleic Acids Research 9:6102-6114 (1981); Mmghetti, et al., J. Biol. Chem. 261 :6747 (1986)); and Weitkamp, et al, Ann. Hum. Genet. 37:219 ( 1973).) [0036] Fusion proteins that contain a human serum albumin moiety generally contain the 585 ammo acid HSA (amino acids 25-609 of SEQ ID NQ:2, SEQ ID NO: 45) or a functional variant thereof. The functional variant can include one or more amino acid deletions, additions or replacement in any desired combination, and includes functional fragments of HSA. The amount of amino acid sequence variation (e.g., through amino acid deletions, additions or replacements) is limited to preserve the serum half-life extending properties of HSA.
[0037] In some embodiments, the functional variant of HSA for use in the fusion proteins disclosed herein can have an amino acid sequence that has at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with SEQ ID NQ:45, preferably when measured over the full length sequence of SEQ ID NO:45. Alternatively or in addition, the functional variant of HSA can have from 1 to about 20, 1 to about 18, 1 to about 17, 1 to about 16, 1 to about 15, 1 to about 14, 1 to about 13, 1 to about 12, 1 to about 11, 1 to about 10, 1 to about 9, 1 to about 8, 1 to about 7, 1 to about 6, or 1 to about 5 amino acid deletions, additions or replacement, in any desired combination.
[0038] Some functional variants of HSA for use in the fusion proteins disclosed herein may be at least 100 amino acids long, or at least 150 amino acids long, and may contain or consist of ail or part of a domain of HSA, for example domain I (amino acids 1-194 of SEQ ID NO:45), II (amino acids 195-387 of SEQ ID NO:45), or lll (ammo acids 388-585 of SEQ ID NO:45). If desired, a functional variant of HSA may consist of or alternatively comprise any desired HSA domain combination, such as, domains I + II (amino acids 1-387 of SEQ ID N():45), domains II + III (amino acids 195-585 of SEQ ID N():45) or domains I + III (amino acids 1-194 of SEQ ID NO:45 + amino acids 388-585 of SEQ ID NO:45). As is well-known in the art, each domain of HSA is made up of two homologous subdomains, namely amino acids 1-105 and 120-194, 195-291 and 316-387, and 388-491 and 512-585 of domains I, Π, and III respectively, with flexible inter-subdomain Sinker regions comprising residues Lysl06 to Glu 119, Giu292 to Vai315 and Glu492 to Ala511. In certain embodiments, the SA moiety of the fusions proteins of the present invention contains at least one subdomain or domain of HSA.
[0039] Functional fragments of HSA suitable for use in the fusion proteins disclosed herein will contain at least about 5 or more contiguous amino acids of HSA, preferably at least about 10, at least about 15, at least about 20, at least about 25, at least about 30, at least about 50, or more contiguous amino acids of HSA sequence or may include part or all of specific domains of HSA.
[0040 ] In some embodiments, the functional variant (e.g., fragment) of HSA for use in the fusion proteins disclosed herein includes an N-tenninal deletion, a C-terminal deletions or a combination of N-terminal and C-terminal deletions. Such variants are conveniently referred to using the ammo acid number of the first and last amino acid in the sequence of the functional variant. For example, a functional variant with a C-terminal truncation can be ammo acids 1-387 of HSA (SEQ ID NO:45).
[0041] Examples of HSA and HSA variants (including fragments) that are suitable for use in the GDF15 fusion polypepides described herein are known in the art. Suitable HSA and HSA variants include, for example full length mature HSA (SEQ ID NO:45) and fragments, such as amino acids 1-387, amino acids 54 to 61, amino acids 76 to 89, amino acids 92 to 300, amino acids 170 to 176, ammo acids 247 to 252, amino acids 266 to 277, amino acids 280 to 288, amino acids 362 to 368, amino acids 439 to 447, amino acids 462 to 475, amino acids 478 to 486, and amino acids 560 to 566 of mature HSA. Such HSA polypeptides and functional variants are disclosed in PCT Publication WO 2005/077042A2, which is incorporated herein by reference in its entirety. Further variants of HSA, such as amino acids 1-373, 1-388, 1-389, 1-369, 1 - 19 and fragments that contain amino acid 1 through amino acid 369 to 419 of HSA are disclosed in European Published Application EP322Q94A1, and fragments that contain 1-177, 1-200 and amino acid 1 through amino acid 178 to 199 are disclosed in European Published Application EP399666A 1.
Linkers
[0042] The SA and GDF15 moieties described in this invention can be directly bonded to each other in the contiguous polypeptide chain, or preferably indirectly bonded to each other through a suitable linker. The linker is preferably a peptide linker. Peptide linkers are commonly used in fusion polypeptides and methods for selecting or designing linkers are well-known. (See, e.g., Chen X et al. Adv. Drug Deliv. Rev. 65(10): 135701369 (2013) and Wriggers W et al, Bwpolymers 80:736-746 (2005).)
[0043] Peptide linkers generally are categorized as i) flexible linkers, ii) helix forming linkers, and iii) cleavable linkers, and examples of each type are known in the art. Preferably, a flexible linker is included in the fusion polypeptides described herein. Flexible linkers may contain a majority of amino acids that are sterically unhindered, such as glycine and alanine. The hydrophiiic amino acid Ser is also conventionally used in flexible linkers. Examples of flexible linkers include, polyglycines (e.g., (Gly)4 and (Gly)s), polyalamnes poiy(Giy-Aia), and poly(Gly-Ser) (e.g., (Glyn-Sern)n or (Sern-Glya)n, wherein each n is independent an integer equal to or greater than 1).
[0044] Peptide linkers can be of a suitable length. The peptide linker sequence may be at least 1 , 2, 3, 4, 5, 6, 7, 8, 9, 10, 1 1 , 12, 13, 14, 15, 16, 17, 18, 19, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, or more amino acid residues in length. For example, a peptide linker can be from about 5 to about 50 amino acids in length; from about 10 to about 40 amino acids in length; from about 15 to about 30 amino acids in length; or from about 15 to about 20 amnio acids in length . Variation in peptide linker length may retain or enhance activity, giving rise to superior efficacy in activity studies. The peptide linker sequence may be comprised of a naturally, or non-naturally, occurring amino acids.
[0045] In some aspects, the ammo acids glycine and serine comprise the amino acids within the linker sequence. In certain aspects, the linker region comprises sets of glycine repeats (GSGi)n, where n is a positive integer equal to or greater than I (preferably 1 to about 20) (SEQ ID NO: 50). More specifically, the linker sequence may be GSGGG (SEQ ID NO:51 ). The linker sequence may be GSGG (SEQ ID NO:52). In certain other aspects, the linker region orientation comprises sets of glycine repeats (SerGly ti, where n is a positive integer equal to or greater than 1 (preferably 1 to about 20) (SEQ ID NO:53).
[0046] In more preferred embodiments, a linker may contain glycine (G) and serine (S) in a random or preferably a repeated pattern.. For example, the linker can be (GGGGS)n (SEQ ID NO:46), wherein n is an integer ranging from 1 to 20, preferably 1 to 4. In a particular example, n is 3 and the linker is GGGGSGGGGSGGGGS (SEQ ID NO: 47).
[0047] In other preferred embodiments, a linker may contain glycine (G), serine (S) and proline (P) in a random or preferably repeated pattern. For example, the linker can be
(GPPGS)n (SEQ ID NO:48),wherein n is an integer ranging from 1 to 20, preferably 1-4. In a particular example, n is 1 and the linker is GPPGS (SEQ ID NO: 49).
[0048] In general, the linker is not immunogenic when administered in a patient, such as a human. Thus linkers may be chosen such that they have low immunogenicity or are thought to have low immunogenicity.
[0049] The linkers described herein are exemplary, and the linker can include other amino acids, such as Glu and Lys, if desired. The peptide linkers may include multiple repeats of, for example, (G4S) (SEQ ID NO:54), (G3S) (SEQ ID NO:55), (G2S) (SEQ ID NO:56)and/or (GlySer) (SEQ ID NO:57), if desired. In certain aspects, the peptide Sinkers may include multiple repeats of, for example, (SG4) (SEQ ID NO: 58), (SG3) (SEQ ID N():59), (SG2) (SEQ ID NO:60) or (SerGly) (SEQ ID NO:51). In other aspects, die peptide linkers may include combinations and multiples of repeating amino acid sequence units, such as (G3S)+(G4S)+(GlySer) (SEQ ID NO:55+SEQ ID NO:54+SEQ ID NO:57). In other aspects, Ser can be replaced with Ala e.g., (G4A) (SEQ ID NO: 62) or (G3A) (SEQ ID NO:63). In yet other aspects, the linker comprises the motif (EAAAK)„, where n is a positive integer equal to or greater than 1, preferably 1 to about 20. (SEQ ID NO: 64) In certain aspects, peptide linkers may also include cleavable linkers.
GDF15 Fusion Polypeptides
[0050] The GDF15 fusion polypeptides described herein contain a GDFI5 moiety and an SA moiety, and optionally a linker. The fusion polypeptide is a contiguous amino acid chain in which the SA moiety is located N-terminally to the GDF15 moiety. The C-terminus of the SA moiety can be directly bonded to the N-tenninus of the GDF15 moiety.
Preferably, the C-terminus of the SA moiety is indirectly bonded to the -terminus of the GDF15 moiety through a peptide linker.
[0051] The SA moiety and GDFI5 moiety can be from any desired species. For example, the fusion protein can contain SA and GDF15 moieties that are from human, mouse, rat, dog, cat, horse or any other desired species. The SA and GDF15 moieties are generally from the same species, but fusion peptides in which the SA moiety is from one species and the GDF15 moiety is from another species (e.g., mouse SA and human GDF15) are also encompassed by this disclosure. [0052] In some embodiments, the fusion polypeptide comprises mouse serum albumin or functional variant thereof and mature human GDF15 peptide or functional variant thereof. For example, the fusion protein can have the amino acid sequence of any of SEQ ID NOS: 16, 18, 22, 24 and 34.
[0053] In preferred embodiments, the SA moiety is an HSA or a functional variant thereof and the GDF15 rnoieiy is the mature human GDF peptide or a functional variant thereof. When present, the optional linker is preferably a flexible peptide linker. In particular embodiments, the fusion polypeptide comprises
A) an SA moiety selected from the group consisting of HSA(25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin: and
B) a GDF 15 moiety selected from the group consisting of: human GDF15(197-308) (SEQ ID NO:44); human GDF15(21 1-308) (ammo acids 211 -308 of SEQ ID NO: 1); human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S); and human GDF15(197-308) (SEQ ID NO: 44) in which Cys273 is replaced with Ser (C273S).
[0054] If desired, the fusion polypeptide can further comprise a linker that links the C- terminus of the SA moiety to the N-terminus of the GDF 15 moiety. Preferably, the linker is selected from (GGGGS)n (SEQ ID NO:46) and (GPPGS)n (SEQ ID NO:48), wherein n is one to about 20. Preferred linkers include ((GGGGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is 1, 2, 3 or 4.
[0055] In more particular embodiments, the fusion polypeptide comprises HSA or a functional variant thereof, a linker, and mature human G.DF.15 polypeptide or a functional variant thereof and has an amino acid sequence that has at least about 90%, at least about 95%, at least about 96%, at least about 97%, at least about 98%, or at least about 99% amino acid sequence identity to any of SEQ ID NOs:20, 26, 28, 30, 32, 38, 40 and 42,
[0056] In even more particular embodiments, the fusion polypeptide has the amino acid sequence of SEQ ID NOs: 20, 26, 28, 30, 32, 38, 40 and 42,
If desired, the fusion polypeptide can contain additional amino acid sequence. For example, an affinity tag can be included to facilitate detecting and/or purifying the fusion polypeptide.
Nucleic Acids and Host Cells
[0057] The invention also relates to nucleic acids that encode the fusion polypeptides disclosed herein, including vectors that can be used to produce the fusion polypeptides. The nucleic acids are isolated and/or recombinant. In certain embodiments, the nucleic acid encodes a fusion polypeptide in which HSA or a functional variant thereof is located N- terminally to human mature GDF15 or a functional variant thereof. If desired the nucleic acid can further encode a linker (e.g., a flexible peptide linker) that bonds the C-terminus of the HSA or a functional variant thereof to the N-terminus of human mature GDF15 or a functional variant thereof. If desired, the nucleic acid can also encode a leader, or signal, sequence to direct cellular processing and secretion of the fusion polypeptide.
[0058] In preferred embodiments, the nucleic acid encodes a fusion polypeptide in which the SA moiety is HSA or a functional variant thereof and the GD F15 moiety is the mature human GDF peptide or a functional variant thereof. When present, the optional linker is preferably a flexible peptide linker. In particular embodiments, the nucleic acid encodes a fusion polypeptide that comprises A) an SA moiety selected from the group consisting of HSA(25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin; and
B) a GDF 15 moiety selected from the group consisting of: human GDF15(197-308) (SEQ ID NO:44); human GDF 15 (211-308) (amino acids 211-308 of SEQ ID NO: !); human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S); and human GDF15(197-308) (SEQ ID NO:44) in which Cys273 is replaced with Ser (C273S).
[0059] If desired, the encoded fusion polypeptide can further comprise a linker that links the C-terminus of the SA moiety to the N-terminus of the GDF 15 moiety. Preferably, the linker is selected from (GGGGS)n and (GPPGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is one to about 20. Preferred linkers include ((GGGGS)n (SEQ ID NO: 46) and (GPPGS)n (SEQ ID NO:48), wherein n is 1, 2, 3 or 4,
[0060] In particular embodiments, the nucleic acid has a nucleotide sequence that has at least about at least about 80%, at least about 85%, at least about 90%, or at least about 95% amino acid sequence identity with any of SEQ ID NOS: 19, 25, 27, 29, 31, 37, 39 and 41, preferably when measured over the full length of SEQ ID NO: 19, 25, 27, 29, 31, 37, 39 or 41. [0061] In more particular embodiments, the nucleic acid has the nucleotide sequence of SEQ ID NO: 19, 25, 27, 29, 31 , 37, 39 or 4 .
[0062] For expression in host cells, the nucleic acid encoding a fusion polypeptide can be present in a suitable vector and after introduction into a suitable host, the sequence can be expressed to produce the encoded fusion polypeptide according to standard cloning and expression techniques, which are known in the art (e.g., as described in Sambrook, J., Fritsh, E. F., and Maniatis, T. Molecular Cloning: A Laborator - Manual 2nd, ed., Cold Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 1989). The invention also relates to such vectors comprising a nucleic acid sequence according to the invention.
[0063] A recombinant expression vector can be designed for expression of a GDF15 fusion polypeptide in prokaryotic (e.g., E. coli) or eukaryotic cells (e.g., insect cells, yeast cells, or mammalian cells). Representative host cells include many E. colt strains, mammalian cell lines, such as CHO, CHO-K1, and HEK293; insect cells, such as Sf9 cells; and yeast cells, such as S. cerevisiae and . pastoris. Alternatively, the recombinant expression vector can be transcribed and translated in vitro, for example using T7 promoter regulatory sequences and T7 polymerase and an in vitro translation system . Vectors suitable for expression in host cells and cell-free in vitro systems are well known in the art. Generally such a vector contains one or more expression control elements that are operably linked to the sequence encoding the fusion polypeptide. Expression control elements include, for example, promoters, enhancers, splice sites, poly adenylation signals and the like. U sually a promoter is located upstream and operably linked to the nucleic acid sequence encoding the fusion polypeptide. The vector can comprise or be associated with any suitable promoter, enhancer, and other expression-control elements. Examples of such elements include strong expression promoters (e.g., a human CMV IE promoter/enhancer, an RSV promoter, SV40 promoter, SL3-3 promoter, MMTV promoter, or HIV LTR promoter, EF1 alpha promoter, CAG promoter) and effective poly (A) termination sequences. Additional elements that can be present in a vector to facilitate cloning and propagation include, for example, an origin of replication for plasmid product in E. coli, an antibiotic resistance gene as a selectable marker, and/or a convenient cloning site (e.g., a polylinker).
[0064] In another aspect of the instant disclosure, host cells comprising the nucleic acids and vectors disclosed herein are provided. In various embodiments, the vector or nucleic acid is integrated into the host cell genome, which in other embodiments the vector or nucleic acid is extra-chromosomal. If desired the host cells can be isolated.
[0065 ] Recombinant cells, such as yeast, bacterial (e.g., E. coli), and mammalian cells (e.g., immortalized mammalian cells) comprising such a nucleic acid, vector, or combinations of either or both thereof are provided. In various embodiments, cells comprising a non- integrated nucleic acid, such as a plasmid, cosmid, phagemid, or linear expression element, which comprises a sequence coding for expression of a fusion polypeptide comprising the human serum albumin or the functional variant thereof and human GDF15 protein or a functional variant thereof, are provided,
[0066] A vector comprising a nucleic acid sequence encoding a GDF15 fusion polypeptide provided herein can be introduced into a host cell using any suitable method, such as by transformation, transfection or transduction. Suitable methods are well known in the art. In one example, a nucleic acid encoding a fusion polypeptide comprising the human seram albumin or the functional variant thereof and human GDF15 protein or the functional variant thereof can be positioned in and/or delivered to a host cell or host animal via a viral vector. Any suitable viral vector can be used in this capacity. [0067] The invention also provides a method for producing a fusion polypeptide as described herein, comprising maintaining a recombinant host cell comprising a recombinant nucleic acid of the invention under conditions suitable for expression of the recombinant nucleic acid, whereby the recombinant nucleic acid is expressed and a fusion polypeptide is produced. In some embodiments, the method further comprises isolating the fusion polypeptide.
Therapeutic Methods and Pharmaceutical Compositions
[0068] The invention also relates to methods for decreasing appetite, decreasing body weight and treating metabolic diseases in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein. The invention also relates to methods for treating type 2 diabetes mellitus, obesity, pancreatitis, dyslipidemia, nonalcoholic steatohepatitis, insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders or body weight disorders in a subject in need thereof, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein. In particular aspects, the invention relates to a methods for treating genetic obesity in a subject in need thereof, such as a subject with Prader-Willi syndrome, leptin mutations and/or melanocortin 4 receptor mutations, said method comprising administering to the subject in need thereof an effective amount of a GDF15 fusion polypeptide (usually in the form of a pharmaceutical composition) as described herein. [0069] Subjects who are overweight or obese are at increased risk for a variety of metabolic diseases and serious health problems. These often appear first as part of the metabolic syndrome, which is characterized by elevated blood pressure, high blood sugar, excess body fat around the abdomen and abnormal blood cholesterol levels. Serious health problems can then develop, such as, type Π diabetes, hypertension, coronary heart disease, stroke, cancer, osteoarthritis, sleep apnea, dyslipidemia, elevated insulin (insulin resistance), and hypoventilation syndrome. Type II diabetes (T2DM) can also give rise to several other serious health problems, such as diabetic neuropathy, diabetic nephropathy, and diabetic retinopathy. Subjects in need of therapy using a fusion polypeptide as described herein are generally overweight or obese. Generally, an adult human is considered to be overweight if he has a body mass index (BMI) between 25 and 29.9, and is considered to be obese if he has a BMI of 30 or higher. Subjects who are at increased risk of developing a metabolic diseases are also candidates for therapy using a fusion polypeptide as described herein. For example, subjects with pre-diabetes or an elevated fasting blood glucose level of 100 to 125 mg/dL are candidates for therapy, as are subjects with type II diabetes (those with fasting blood glucose levels of 126 mg/dL or higher).
[0070] Current therapeutic options comprise lifestyle modification (diet and exercise), bariatric surgery or drug therapy. Diet and exercise improvements rarely result in durable weight loss due to physiological counter-regulatory systems. Bariatric surgery carries considerable risk and is not sufficiently scalable to address the current obesity epidemic. Pharmacotherapy is limited to only a few approved agents with limited efficacy. These include phentermine (approved only for short-term use), the fat absorption inhibitor oriistat, iorcaserin (Beiviq, a serotonin 5HT2c receptor agonist), and the fixed-dose combination of topiramate and phentermine (Qsymia). Qsymia is the most efficacious, reporting -10% placebo-adjusted weight loss over 2 years, but has several safety concerns including birth defects and elevated blood pressure ,
[0071] An effective amount of the fusion polypeptide, usually in the form of a pharmaceutical composition, is administered to a subject in need thereof. The fusion polypeptide can be administered in a single dose or multiple doses, and tlie amount administered and dosing regimen will depend upon the particular fusion protein selected, the severity of the subject's condition and other factors. A clinician of ordinary skill can determined appropriate dosing and dosage regimen based on a number of other factors, for example, the individual's age, sensitivity, tolerance and overall well-being.
[0072] The administration can be performed by any suitable route using suitable methods, such as parenterally (e.g., intravenous, subcutaneous, intraperitoneal,
intramuscular, intrathecal injections or infusion), orally, topically, intranasal ly or by inhalation. Parental administration is generally preferred. Subcutaneous administration is preferred.
[0073] The GDF15 fusion polypeptides of the present invention can be administered to tlie subject in need tliereof alone or with one or more other agents. When the fusion polypeptide is administered with another agent, tlie agents can be administered concurrently or sequentially to provide overlap in the therapeutic effects of the agents. Examples of other agents that can be administered in combination with the fusion polypeptide include:
[0074] 1 . Antidiabetic agents, such as insulin, insulin derivatives and mimetics; insulin secretagogues such as the sulfonylureas (e.g. , chlorpropamide, tolazamide, acetohexamide, tolbutamide, glyburide, glimepinde, glipizide); glyburide and Amaryl; insulinotropic sulfonylurea receptor ligands such as meglitinides, e.g. nateglinide and repaglinide; thiazolidinediones (e.g., rosiglitazone (AVANDIA), troglitazone (REZULIN), pioglitazone (ACTOS), balaglitazone, rivoglitazone, netoglitazone, troglitazone, englitazone, ciglitazone, adaglitazone, darglitazone that enhance insulin action (e.g., by insulin sensitization), thus promoting glucose utilization in peripheral tissues; protein tyrosine phosphatase- IB (PTP-1B) inhibitors such as PTP-112; Cholesteryl ester transfer protein (CETP) inhibitors such as torcetrapib, GSK3 (glycogen synthase kinase-3) inhibitors such as SB-517955, SB-4195052, SB-216763, NN-57-05441 and IMN-57-05445; RX iigands such as GW-0791 and AGN- 194204; sodium-dependent glucose cotransporter inhibitors such as T-1095; glycogen phosphorylase A inhibitors such as BAY R3401; biguanides such as metfonnin and other agents that act by promoting glucose utilization, reducing hepatic glucose production and/or diminishing intestinal glucose output; alpha- glucosidase inhibitors such as acarbose and migiitoi) and other agents that slow down carbohydrate digestion and consequently absorption from the gut and reduce postprandial hyperglycemia; GLP-1 (glucagon like peptide- 1 ), GLP-1 analogs such as Exendin-4 and GLP-1 mimetics; and DPPIV (dipeptidyl peptidase IV) inhibitors such as vikiagiiptin;
[0075] 2. Hypolipidemic agents such as 3-hydroxy-3-methyl-glutaryl coenzyme A (HMG-CoA) reductase inhibitors, e.g. lovastatin, pravastatin, simvastatin, pravastatin, cerivastatin, mevastatin, velostatin, fluvastatin, dalvastatin, atorvastatin, rosuvastatin and rivastatin; squalene synthase inhibitors; FXR (farnesoid X receptor) and LXR (liver X receptor) ligands; bile acid sequenstrants, such as cholestyramine and colesevelam; tibrates; nicotinic acid and aspirin;
[0076] 3. Anti -obesity agents such as orlistat, rimonabant, phentermine, topiramate, qunexa, and locaserin;
[0077] 4. Anti-hypertensive agents, e.g. loop diuretics such as ethacrynic acid, furosemide and torsemide; angiotensin converting enzyme (ACE) inhibitors such as benazepril, captopril, enaiaprii, fosinopni, iisinoprii, moexipril, perinodopril, quinapril, ramipril and trandolapril; inhibitors of the Na-K-ATPase m em brane pump such as digoxin; neutralendopeptidase (NEP) inhibitors; ACE/NEP inhibitors such as omapatrilat, sampatrilat and fasidotril; angiotensin II antagonists such as candesartan, eprosartan, irbesartan, losartan, telmisartan and valsartan, in particular valsartan; renin inhibitors such as ditekiren, zankiren, terlakiren, aliskiren, RO 66-1132 and RO-66-1168; β-adrenergic receptor blockers such as acebutolol, atenolol, betaxolol, bisoprolol, metoprolol, nadolol, propranolol, sotaiol and timolol; inotropic agents such as digoxin, dobutamine and milrinone; calcium channel blockers such as amlodipine, bepridil, diltiazem, felodipine. nicardipine, nimodipine, nifedipine, nisoldipine and verapamil; aldosterone receptor antagonists; and aldosterone synthase inhibitors;
100781 5. Agonists of peroxisome proliferator-activator receptors, such as fenofibrate, pioglitazone, rosiglitazone, tesaglitazar, BMS-298585, L-796449, the compounds specifically described in the patent application WO 2004/103995 i.e. compounds of examples 1 to 35 or compounds specifically listed in claim 21, or the compounds specifically described in the patent application WO 03/043985 i.e. compounds of examples 1 to 7 or compounds specifically listed in claim 19 and especially (R)-l-{4-[5-methyl-2-(4- trifluoromethyl-pheny1)~oxazol~4~ylmem^
carboxylic or a salt thereof; and
[0079] 6, The specific anti-diabetic compounds described in Expert Opin Investig Drugs 2003, 12(4): 623-633, figures 1 to 7.
[0080] The invention also relates to pharmaceutical compositions comprising a GDF15 fusion polypeptide as described herein (e.g., comprising a fusion polypeptide comprising human serum, albumin or a functional variant thereof and human GDF15 protein or a functional variant thereof). Such pharmaceutical compositions can comprise a
therapeutically effective amount of the fusion polypeptide and a pharmaceutically or physiologically acceptable carrier. The carrier is generally selected to be suitable for the intended mode of administration and can include agents for modifying, maintaining, or preserving, for example, the H, osmolality, viscosity, clarity, color, isotonicity, odor, sterility, stability, rate of dissolution or release, adsorption, or penetration of the composition. Typically, these carriers include aqueous or alcoholic/aqueous solutions, emulsions or suspensions, including saline and/or buffered media.
[0081] Suitable agents for inclusion in the pharmaceutical compositions include, but are not limited to, amino acids (such as glycine, glutamine, asparagine, arginine, or lysine), antimicrobials, antioxidants (such as ascorbic acid, sodium sulfite, or sodium hydrogen - sulfite), buffers (such as borate, bicarbonate, Tris-HCl, citrates, phosphates, or other organic acids), bulking agents (such as mannitol or glycine), chelating agents (such as
ethylenediamine tetraacetic acid (EDTA)), complexing agents (such as caffeine,
polyvinylpyrrolidone, beta-cyclodextrin, or hydroxypropyl-beta-cyclodextrin), fillers, monosaccharides, disaccharides, and other carbohydrates (such as glucose, mannose, or dextrins), proteins (such as free serum albumin, gelatin, or immunoglobulins), coloring, flavoring and diluting agents, emulsifying agents, hydrophilic polymers (such as
polyvinylpyrrolidone), low molecular weight polypeptides, salt-forming counterions (such as sodium), preservatives (such as benzalkomum chloride, benzoic acid, salicylic acid, thimerosal, phenethyl alcohol, methviparaben, propylparaben, chlorhexidine, sorbic acid, or hydrogen peroxide), solvents (such as glycerin, propylene glycol, or polyethylene glycol), sugar alcohols (such as mannitol or sorbitol), suspending agents, surfactants or wetting agents (such as pluronics; PEG; sorbitan esters; polysorbates such as Polysorbate 20 or Polysorbate 80; Triton; tromethamine; lecithin; cholesterol or tyloxapal), stability enhancing agents (such as sucrose or sorbitol), tonicity enhancing agents (such as alkali metal haiides, such as sodium or potassium chloride, or mannitol sorbitol), delivery vehicles, diluents, excipients and/or pharmaceutical adjuvants
[0082] Parenteral vehicles include sodium chloride solution, Ringer's dextrose, dextrose and sodium chloride and lactated Ringer's. Suitable physiologically-acceptable thickeners such as carboxymethylcellulose, polyvinylpyrrolidone, gelatin and alginates may be included. Intravenous vehicles include fluid and nutrient replenishes and electrolyte replenishes, such as those based on Ringer's dextrose. In some cases it will be preferable to include agents to adju st tonicity of the composition, for example, sugars, polyalcohols such as mannitol, sorbitol, or sodium chloride in a pharmace tical composition. For example, in many cases it is desirable that the composition is substantially isotonic. Preservatives and other additives, such as antimicrobials, antioxidants, chelating agents and inert gases, may also be present. The precise formulation will depend on the route of administration. Additional relevant principle, methods and components for pharmaceutical formulations are well known. ( See, e.g., Allen, Loyd V. Ed, (2012) Remington's Pharmaceutical Sciences, 22th Edition)
[0083] When parenteral administration is contemplated, the pharmaceutical compositions are usually in the form of a sterile, pyrogen-free, parenterally acceptable composition. A particularly suitable vehicle for parenteral injection is a sterile, isotonic solution, properly preserved. The pharmaceutical composition can be in the form of a lyophilizate, such as a lyophilized cake.
[0084] In certain embodiments, the pharmaceutical composition is for subcutaneous administration. Suitable formulation components and methods for subcutaneous administration of polypeptide therapeutics (e.g., antibodies, fusion protiens and the like) are known in the art. See, e.g., Published United States Patent Application No 201 1/0044977 and US Patent No. 8,465,739 and US Patent No. 8,476,239. Typically, the pharmaceutical compositions for subcutaneous administration contain suitable stabilizers (e.g, amino acids, such as methionine, and or saccharides such as sucrose), buffering agents and tonicifying agents.
Definitions
[0085] The term "amino acid mimetic,"' as used herein, refers to chemical compounds that have a structure that is different from the general chemical structure of an amino acid, but functions in a manner similar to a naturally occurring amino acid.
[0086] "Atherosclerosis" is a vascular disease characterized by irregularly distributed lipid deposits in the intima of large and medium-sized arteries, sometimes causing narrowing of arterial lumens and proceeding eventually to fibrosis and calcification. Lesions are usually focal and progress slowly and intermittently. Limitation of blood flow accounts for most clinical manifestations, which vary with the distribution and severity of lesions.
[0087] As used herein, the phrase "body weight disorder" refers to conditions associated with excessive body weight and/or enhanced appetite. Various parameters are used to determine whether a subject is overweight compared to a reference healthy individual, including the subject's age, height, sex and health status. For example, a subject may be considered overweight or obese by assessment of the subject's Body Mass Index (BMI), which is calculated by dividing a subject's weight in kilograms by the subject's height in meters squared. An adult having a BMI in the range of -18.5 to -24,9 kg/m is considered to have a normal weight; an adult having a BMI between -25 and -29.9 kg/m may be considered overweight (pre-obese); an adult having a BMI of -30 kg/m or higher may be considered obese. Enhanced appetite frequently contributes to excessive body weight. There are several conditions associated with enhanced appetite, including, for example, night eating syndrome, which is characterized by morning anorexia and evening polyphagia often associated with insomnia, but which may be related to injury to the hypothalamus.
[0088] "Cardiovascular diseases" are diseases related to the heart or blood vessels.
[0089] "Conservative" ammo acid replacements or substitutions refer to replacing one amino acid with another that has a side chain with similar size, shape and/or chemical characteristics. Examples of conservative amino acid replacements include replacing one amino acid with another amino acid within the following groups: 1) Alanine (A), Glycine (G); 2) Aspartic acid (D), Glutamic acid (E): 3) Asparagme (N), Glutamine (Q); 4) Arginine (R), Lysine (K); 5) Isoleucine (I), Leucine (L), Methionine (M), Valine (V); 6) Phenylalanine (F), Tyrosine (Y), Tryptophan (W); 7) Serine (S), Threonine (T); and 8) Cysteine (C), Methionine (M).
[0090] "Coronar ' heart disease", also called coronary artery' disease, is a narrowing of the small blood vessels that supply blood and oxygen to the heart. [0091] "Diabetic complications" are problems caused by high blood glucose levels, with other body functions such as kidneys (nephropathies), nerves (neuropathies), feet (foot ulcers and poor circulation) and eyes (e.g. retinopathies). Diabetes also increases the risk for heart disease and bone and joint disorders. O ther long-term complications of diabetes include skin problems, digestive problems, sexual dysfunction and problems with teeth and gums.
[0092] "Dyslipidemia" is a disorder of lipoprotein metabolism, including lipoprotein overproduction or deficiency. Dyslipidemias may be manifested by elevation of the total cholesterol, low-density lipoprotein (LDL) cholesterol and triglyceride concentrations, and a decrease in high-density lipoprotein (HDL) cholesterol concentration in the blood.
[0093] The term "effective amount" refers to is an amount sufficient to achieve the desired therapeutic effect, under the conditions of administration, such as an amount sufficient to decrease appetite, cause weight loss, decrease fat mass, decrease fasting glucose levels, insulin release, and/or food intake. For example, a "tlierapeutieally-effeetive amount" administered to a patient exhibiting, suffering, or prone to suffer from metabolic disorders (such as T2DM, obesity, or metabolic syndrome), is such an amount which causes an improvement in the pathological symptoms, disease progression, physiological conditions associated with or induces resistance to succumbing to the afore mentioned disorders.
[0094] "Functional variant" and "biologically active variant" refers to a polypeptide that contains an amino acid sequence that differs from a reference polypeptide (e.g., I ISA . human wild type mature GDF15 peptide) but retains desired functional activity of the reference polypeptide. The amino acid sequence of a functional variant can include one or more amino acid replacements, additions or omissions relative to the reference polypeptide, and include fragments of the reference polypeptide that retain the desired activity. For example, a functional variant of SA (e.g., HSA) prolongs the serum half-life of the fusion polypeptides described herein in comparison to the half-life of GDF15., while retaining the reference GDF15 (e.g., human GDF15) polypeptide's activity (e.g., weight loss, appetite suppressing, insulin release, insulin sensitivity, and/or fat mass reduction) activity .
Polypeptide variants possessing a somewhat decreased level of activity relative to their wild- type versions can nonetheless be considered to be functional or biologically active polypeptide variants, although ideally a biologically active polypeptide possesses similar or enhanced biological properties relative to its wild-type protein counterpart (a protein that contains the reference ammo acid sequence).
[0095] The phrase "glucose tolerance", as used herein, refers to the ability of a subject to control the level of plasma glucose and/or plasma insulin when glucose intake fluctuates. For example, glucose tolerance encompasses the subject's ability to reduce, within about 120 minutes, the level of plasma glucose back to a level determined before the intake of glucose.
[0096] "Glucose intolerance, or 'Impaired Glucose Tolerance (IGT) is a pre-diabetic state of dysglycemia that is associated with increased risk of cardiovascular pathology. The pre-diabetic condition prevents a subject from moving glucose into cells efficiently and utilizing it as an efficient fuel source, leading to elevated glucose levels in blood and some degree of insulin resistance.
[0097] The phrase "glucose metabolism disorder" encompasses any disorder characterized by a clinical sy mptom or a combination of clinical symptoms that is associated with an elevated level of glucose and/or an elevated level of insulin in a subject relative to a healthy individual . Elevated levels of glucose and/or insulin may be manifested in the followingdiseases, disorders and conditions: hyperglycemia, type II diabetes, gestational diabetes, type I diabetes, insulin resistance, impaired glucose tolerance, hyperinsulinemia, impaired glucose metabolism, pre-diabetes, metabolic disorders (such as metabolic disease or disorder, which is also referred to as syndrome X), and obesity, among others. The GDF15 conjugates of the present disclosure, and compositions thereof, can be used, for example, to achieve and/or maintain glucose homeostasis, e.g. , to reduce glucose level in the bloodstream and/or to reduce insulin level to a range found in a healthy subject.
[0098] "Hyperglycemia" refers to a condition in which an elevated
amount of glucose circulates in the blood plasma of a subject relative to a healtliy individual. Hyperglycemia can be diagnosed using methods known in the art, including measurement of fasting blood glucose levels as described herein.
[0099] hyperinsulinemia" refers to a condition in which there are elevated levels of circulating insulin when, concomitantly, blood glucose levels are either elevated or normal. Hyperinsulinemia can be caused by insulin resistance which is associated with dyslipidemia such as high triglycerides, high cholesterol, high low-density lipoprotein (LDL) and low high-density lipoprotein (HDL); high uric acids levels; polycystic ovary syndrome; type II diabetes and obesity. Hyperinsulinemia can be diagnosed as having a plasma insulin level higher than about 2 pU/mL.
[00100] "Hypoglycemia", also called low blood sugar, occurs when blood glucose level drops too low to provide enough energy for the body's activities.
[00101 ] "Identity" means, in relation to nucleotide or amino acid sequence of a nucleic acid or polypeptide molecule, the overall relatedness between two such molecules.
Calculation of the percent sequence identity (nucleotide or amino acid sequence identity) of two sequences, for example, can be performed by aligning the two sequences for optimal comparison purposes (e.g., gaps can be introduced in one or both of a first and a second nucleic acid or amino acid sequence for optimal alignment). The nucleotides or amino acids at corresponding positions are then compared. When a position in the first sequence is occupied by the same nucleotide or amino acid as the corresponding position in the second sequence, then the molecules are identical at that position. The percent identity between the two sequences is a function of the number of identical positions shared by the sequences, taking into account the number of gaps, and the length of each gap, which needs to be introduced for optimal alignment of the two sequences. The comparison of sequences and determination of percent identity between two sequences can be accomplished using a mathematical algorithm. For example, the percent identity between two sequences can be determined using methods such as those described by the National Center for Biotechnology information (http://www.ncbi .nlm.nih.gov/). For example, the percent identity between two sequences can be determined using Clustai 2.0 multiple sequence alignment program and default parameters. Larkin MA et ai. (2007) "Clustai W and Clustai X version 2.0." Bioinformatics 23(21): 2947-2948.
[00102] "Insulin resistance" is defined as a state in which a normal amount of insulin produces a subnormal biologic response.
[001031 The term "metabolic diseases," and terms similarly used herein, includes but is not limited to obesity, T2DM, pancreatitis, dyslipidemia, nonalcoholic steatohepatitis (NASH), insulin resistance, hyperinsulinemia, glucose intolerance, hyperglycemia, metabolic syndrome, hypertension, cardiovascular disease, atherosclerosis, peripheral arterial disease, stroke, heart failure, coronary heart disease, diabetic complications (including but not limited to chronic kidney disease), neuropathy, gastroparesis and other metabolic disorders.
[00104] The term "metabolic disease or disorder" refers to an associated cluster of traits that includes, but is not limited to, hyperinsulinemia, abnormal glucose tolerance, obesity, redistribution of fat to the abdominal or upper body compartment, hypertension, dyslipidemia characterized by high triglycerides, low high density lipoprotein (HDL)-cholesterol, and high small dense low density lipoprotein (LDL) particles. Subjects having metabolic disease or disorder are at risk for development of Type 2 diabetes and, for example, atherosclerosis.
[001 5] "Metabolic syndrome" can be defined as a cluster of risk factors that raises the risk for heart disease and other diseases like diabetes and stroke. These risk factors include: abdominal fat— in most men a wais hip ratio >0.9 or BMI > 30 kg/m2; high blood sugar— at least 1 10 milligrams per deciliter (mg/dl) after fasting; high triglycerides~at least 150 mg/dL in the bloodstream; low HDL— less than 40 mg/dl; and, blood pressure of 130/85 mmHg or higher (World Health Organization).
[00106] The term "'moiety", as used herein, refers to a portion of a fusion polypeptide described herein. Hie fusion polypeptides include a GDF15 moiety, which contains an amino acid sequence derived from GDF15, and an SA moiety, which contain an amino acid sequence derived from SA. The fusion protein optionally contains a linker moiety, which links the DGF15 moiety and the SA moiety, in the fusion polypeptide. Without wishing to be bound by any particular theory, it is believed that the GDF15 moiety confers biological function of decreasing appetite, promoting weight loss and treating obesity and other metabolic diseases, while the SA moiety prolongs the serum half-life, improves expression and stability of the fusion polypeptides described herein.
[00107] The term "naturally occurring" when used in connection with biological materials such as nucleic acid molecules, polypeptides, host cells, and the like, refers to materials that are found in nature and are not manipulated by man. Similarly, "non-naturally occurring" as used herein refers to a material that is not found in nature or that has been structurally modified or synthesized by man. When used in connection with nucleotides, the term "naturally occurring" refers to the bases adenine (A), cytosine (C), guanine (G), thymine (T), and uracil (U). When used in connection with amino acids, the term "naturally occurring" refers to the 20 conventional ammo acids (i.e., alanine (A), cysteine (C), aspartic acid (D), glutamic acid (E), phenylalanine (F), glycine (G), histidine (H), isoleucine (I), lysine (K), leucine (L), methionine (M), asparagine (N), proline (P), glutamine (Q), arginine (R), serine (S), threonine (T), valine (V), tryptophan (W), and tyrosine (Y)), as well as selenocysteine, pyrrolysine (PYL), and pyrroline-carboxy-lysine (PCL),
[00108] '"Nonalcoholic steatoliepatitis (NASH)" is a liver disease, not associated with alcohol consumption, characterized by fatty change of hepatocvtes, accompanied by intralobular inflammation and fibrosis.
[00109] "Obesity," in terms of the human subject, can be defined as an adult with a Body Mass Index (BMI) of 30 or greater (Centers for Disease Control and Prevention).
[00110] "Pancreatitis" is inflammation of the pancreas.
[001 11] As used herein, the terms "variant," "mutant," as well as any like terms, when used in reference to GDF15 or SA or specific versions thereof (e.g., "GDF15 protein variant," "human GDF15 variant," etc.) define protein or polypeptide sequences that comprise modifications, truncations, or other variants of naturally occurring (i.e., wild-type) protein or polypeptide counterparts or corresponding native sequences. "Variant GDF15" or "GDF15 mutant," for instance, is described relative to the wild-type (i.e., naturally occurring) GDF15 protein as described herein and known in the literature.
[00112] A "subject" is an individual to whom a fusion polypeptide is administered. The subject is preferably a human, but "subject" includes pet and livestock animals, such as cows, sheep, goats, horses, dogs, cats, rabbits, guinea pigs, rats, mice or other bovine, ovine, equine, canine, feline, rodent or murine species, poultry and fish.
[001 13] '"Type 2 diabetes mellitus" or "T2DM" is a condition characterized by excess glucose production and circulating glucose levels remain excessively high as a result of inadequate glucose clearance and the inability of the pancreas to produce enough insulin. EXAMPLES
[00114] The following examples, including the experiments conducted and results achieved, are provided for illustrative puiposes only and are not to be construed as limiting the present invention.
I. Expression and Purification of Fusion Polypeptides
A. Mammalian Cell Expression and Purification of Albumin-human GDF15 Fusions
[00115] Constructs of albumin-human GDF15 fusion proteins were expressed in transiently transfected HE 293F ceils. Briefly, a liter of HEK293F cells 1 mg of DNA and 3 mg of linear 25 kDa polyethylenimine were mixed in 100 mL of medium, incubated at room temperature for 10 minutes, and then added to the cells. The cells were incubated for 5 days post transfection at 37°C at 125 rpm (50 mm throw) at 8% C02 at 80% humidity. The ceils were removed by centrifugation for 20 minutes at 6,000 x g at 4°C. The supernatant was filtered through a 0.8/0,2 μιη membrane and buffer exchanged into 100 mM TRIS pH 8.0 by TFF. The GDF15 constructs were captured on a Q Sepharose anion exchange column and eluted in a 10 column volume gradient from 0 - 400 mM NaCl in 100 mM TRIS pH 8.0. The fractions containing GDF15 were further purified by size exclusion chromatography in IX DPBS, 1.47 mM KH2P04, 8.06 mM \a>l IPO :-?! ! ·(). 137.9 mM NaCl, 2.67 mM KC1. The fractions containing GDF15 were flask frozen in liquid nitrogen and stored at -80°C.
Mammalian Cell Expression and Purification of His-human GDF15 Fusion Proteins [001 16] Constructs of His-human GDF15 fusion proteins were expressed in transiently transfected HEK293F cells. Briefly, per 2.5 liters of HEK293F cells 2.5 mg of DNA and 7.5 mg of linear 25 kDa polyethyienimine were mixed in 250 mL of medium, incubated at room temperature for 10 minutes, and then added to the cells. The cells were incubated for 4 days post transfection at 37°C at 125 rpm (50 mm throw) at 8% C02 at 80% humidity. The cells were removed by centrifugation for 20 minutes at 6,000 χ g at 4°C. The supernatant was filtered through a 0.8/0.2 um membrane. 1 M citric acid pH 3 was added to the filtered supernatant to a final concentration of 135 mM, solid sodium chloride was added to a final concentration of 2 M, and the supernatant was filtered through a 0.22 um membrane. 5 mL of phenyl sepharose resin were equilibrated in 100 mM citric acid, 2 M NaCl, pH 3 and added to the supernatant. The resin was incubated with the supernatant for 2 hours at room temperature and packed into a 5 cm gravity column . The resm was washed with 20 mL of 100 mM citric acid, 2 M NaC!, pi 1 3; 20 mL of 100 mM citric acid, 1.5 M NaCl, pH 3; 100 mM citric acid, 1 M NaCl, pH 3: 100 mM citric acid, 0.5 M NaCl, pH 3; 100 mM citric acid, pH 3; 100 mM citric acid, 20% ethanol, pH 3: and 100 mM citric acid, 50% ethanoi, pH 3. The washes containing no NaCl were pooled. 2 M TRIS base added to the phenyl sepharose pool to a final concentration of 180 mM yielding a final pH of 7.5. 5 M NaCl was added to a final concentration of 150 mM. 160 μί, of Ni Sepharose HP resin were equilibrated in PBS, added to the phenyl sepharose pool, and incubated for 1 hour at room temperature. The resin was packed into a 1 cm gravity column and washed with 20 mL of PBS followed by 1 mL of PBS + 100 mM imidazole. The bound protein was eiuted in 1 mL of PBS + 500 mM imidazole. The fractions containing GDF15 were flash frozen in liquid nitrogen and stored at -80°C.
B. Yeast Expression and Purification [001 17] Constructs of human GDF15 were expressed in Pichia pastoris utilizing methanol induction, Plasmid D A was linearized with Sad for use in transformation. The linearized DNA was transformed into Pichia pastoris strain SMD1168 and expressed in BMMY medium at pH 6 with 1% (v/v) methanol at 30°C at 200 rpm ( 1 inch throw) for 4 days. Methanol was added to a final concentration of 1% (v/v) each day during expression. The cells were removed by centrifugation for 20 minutes at 5,000 g at 4°C and the supernatant was filtered through a 0.22 μτη membrane. An equal volume of 1 M citric acid, 3 M NaCl pH 2.75 was added to the filtered supernatant. Phenyl Sepharose 6 was added to the supernatant and the GDF15 was bound by incubation for 1 hour at room temperature while stirring. The resin was packed into a gravit - column and the flow-through was removed. The resin was washed with 25 column volumes of 0.5 M citric acid, 1.5 M NaCl pH 3, 5 column volumes of 100 mM citric acid pH 3, and 5 column volumes of 100 mM citric acid, 20% ethanol pH 3. The bound protein was eSuted in 5 χ 1 column volume of 100 mM citric acid, 50% ethanol, pH 3. The elution fractions containing GDF15 were combined, diluted 1: 10 into 25 mM bis-TRIS pH 5, and filtered through a 0.22 μτη membrane. SP Sepharose cation exchange resin was added to the GDF 5 and incubated for 1 hour at room, temperature. The resin was packed into a gravity column and the flow-through was removed. The column was washed with 50 column volumes of 25 mM bis-TRIS pH 5 and eluted in 10 column volumes of 50 mM sodium phosphate, 150 mM NaCl pH 6.2.
C. E. coli Expression
[00118] E coli produced GDF15 was fused to a modified autoprotease P20 from Classical swine fever vims and expressed in inclusion bodies. E. coli transformed with GDF15 plasmid DNA were grown for 60 hours at 30°C in ZYP-5052 auto induction medium (Studier F.W., Protein Expression and Purification 41 (2005) 207-234). The cell pellet was harvested by centrifugation for 30 minutes at 5,000 χ g at 18°C. Per liter of culture, the pellet was resuspended in 250 mL of 100 mM TRIS pH 8, 150 mM NaCl, 3 mM EOT A, 0.01% (v/v) Triton X-1G0, 1 mg/mL lysozyme and incubated for 20 minutes at room temperature, rotating. 250 mL of 100 mM TRIS pH 8, 150 mM NaCl, 20 mM CaCl2, 20 mM MgCl2, 0.25 mg/mL DNase I was added followed by an incubation for 20 minutes at room temperature, stirring. The pellet was centrifuged for 15 minutes at 5,000 χ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 rnL of 2% (v/v) Triton X-100 and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 15 minutes at 5,000 χ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 mL of 500 mM NaCl and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 χ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 ml, of 100 mM TRIS pH 8, 150 mM NaCl, 20 mM CaCL, 20 mM MgCl2, 0.25 mg/mL DNase I and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 χ g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 rnL of 80% (v/v) ethanol and incubated for 20 minutes at room temperature, rotating. The pellet was centrifuged for 20 minutes at 5,000 x g at 18°C and the supernatant was discarded. The pellet was resuspended in 500 rnL 100 mM TRIS pH 8, 500 mM NaCl, 8 M urea and incubated for 1 hour at room temperature, rotating. 10 mL of Ni Sepharose High Performance resin were added and incubated at room temperature for 1 hour, rotating. The resin was packed into a gravity column and the flow- through was discarded. The resin was washed with 25 column volumes of 100 mM TRIS pH 8, 500 mM NaCl, 8 M urea the 25 column volumes of 100 mM TRIS pH 8, 1 M NaCl, 2 M urea. The bound protein was eluted in 2 5 column volumes of 100 mM TRIS pH 8, 1 M NaCl, 2 M urea, 0.5 M imidazole. The eluted protein was diluted 1 : 10 into 1 M TRIS-base, 1 M NaCl, 0.2 M histidine, 10 mM TCEP, pH 8.5. The sample was stirred briefly to mix and incubated overnight at room temperature with no agitation. The sample was loaded over a 6 gram HLB cartridge, washed in 100 mL of 0.1% (v/v) formic acid in water, and eluted in 50 mL of 0.1% (v/v) formic acid in isopropanol. The HLB elution was diluted 1 :20 into 1 liter of 50 mM HEPES, 500 mM NaCl, 2 mM TCEP, 8 M urea, pH 7.6. 10 mL of Ni Sepharose High PerfoiTnance resin were added and incubated at room temperature for 1 hour, stirring. The resin was packed into a gravity column and the flow-though was saved. The Ni flow- though was loaded over a 6 gram HLB cartridge, washed in 100 mL of 0.1 % (v/v) formic acid in water, and eluted in 50 mL of 0.1% (v/v) formic acid in isopropanol . The second HLB elution was diluted 1 :20 into 1 liter of 100 mM TRIS pH 8, 0.5 M urea, 2 mM oxidized glutathione, 2 mM reduced glutathione. The sample was stirred briefly to mix and incubated overnight at room temperature with no agitation. 100 mL of 5 M NaCl were added to make a final concentration of 500 mM and the sample was loaded over a 6 gram HLB cartridge. The cartridge was washed with 100 mL of 0.1% (v/v) formic acid in water and eluted in 25 mL of 0.1% (v/v) formic acid in ethanoi. The HLB elution was diluted 1 :4 by the addition of 75 mL of 50 mM bis-TRIS pH 4.8 and 1 mL of SP Sepharose resm was added . The resin was incubated with the GDF15 for 1 hour at room temperature and the packed into a gravity column. The resin was washed with 1 mL of 50 mM bis-TRIS pH 4.8 and eluted in 3 χ 1 mL of PBS pH 6.4. Fractions 1 and 2 were combined, flash frozen in liquid nitrogen, and stored at -80°C.
II. Animal studies
[00119] Animal Studies: All animal studies described in this document were approved by the Novartis Institutes for Biomedical Research Animal Care and Use Committee in accordance with local and federal regulations and guidelines. Male mice (C57BL/6NTac) fed either a standard laboratory chow diet or a 60% fat diet (Research Diets D 124921) from 6- weeks of age onward were purchased from Taconic. Upon arrival, mice were housed one animal per cage typically under a 12h: 12h reverse light-dark cycle. Animals all received a minimum of 1 week acclimation prior to any use. Mice were typically studied between 3-5 months of age. Prior to being studied, mice were randomized (typically 1-day prior to the experimental period) based on body weight such that each group had a similar average body- weight .
[00320] Hydrodynamic DNA injections: On the day of study, mice were placed in fresh cages, and the old food removed. Each study animal (diet-induced obese male mice) received a single hydrodynamic injection of plasmid DNA via tail vein. DNA (typically 3 micrograms/mouse) was diluted in sterile saline at a volume -6.5 % of the animal's body weight and rapidly injected within -5-10 seconds. Immediately after injection, pre-weighed fresh high-fat diet diet was added to each cage at the end of the procedures above. Food intake and body weight were measured at the indicated time points.
[0 121] Recombinant GDF15 analogs: On the day of study, mice were placed in fresh cages, and the old food removed. Approximately lh later and just prior to the dark cycle, mice received a subcutaneous dose of either vehicle (I X PBS) or a GDF15 analog at the indicated times. After all injections are completed, the mice were reweighed and a defined amount of food returned (~ 50g per mouse of standard chow or high-fat diet). Food intake and body weight were measured over the course of the study at the times indicated.
[00122] Plasma GDF15 exposure: In surrogate animals treated as described above, plasma was collected into EDTA coated tubes at the indicated times, and human GDF15 levels were measured by ELISA as per the manufacturer's instructions (R&D Systems Quantikine Human GDF15 Immunoassay ; DGD1 0). This assay does not recognize endogenous mouse GDF15. [00123] Body composition; In some animals, body composition was assessed by NMR (Broker Mini Spec Model LF90U) as per the manufacturer's instructions. The mass of fat tissue, lean tissue and free fluid was calculated using MiniSpec software V.2.59.rev.6.
Results
[00124] All mammalian cell expressed constructs were secreted using the mouse Ig chain V-III region MOPC 63 signal peptide with the exception of the mouse albumin domain 1 fusion and the non 3x4GS linkers which were secreted using the human CD8A signal peptide. Yeast expressed constructs were secreted using a modified mating factor alpha- 1 signal peptide.
[00125] GDF15 can cause or promote weight loss agent in mice. However, characteristics of GDF15 make the naturally occurring peptide unsuitable for use as a therapeutic in humans, such as the short lived plasma half-life (~lh) of the wild-type human peptide and poor expression levels in mammalian cells (Fairlie WD, et. al. Gene (2000) 254:67-76). To help understand whether GDF15 can be modified to improve its properties, e.g., extend its plasma half-life, the inventors solved the crystal structure of the protein . The GDF15 crystal structure revealed a unique disulfide pattern for GDF15 compared to other members of the TGFbeta superfamily that contain the 9 conserved cysteine residues, such as TGFB 1-3 and inhibm beta (Galat A Ceil. Mol. Life Sci. (2011) 68:3437-3451). To test the functional importance of these disulfide bonds, mammalian expression vectors were constracted that encoded proteins where each of the conserved cysteine residues that make up the disulfide bonds were individually mutated to serine residues. The expression constructs were delivered by hydrodynamic DNA injection to diet-induced obese mice as described in the Material and Methods section. Mice injected with the expression vector encoding naturally occurring GDF15 ate 31.1% less food and were 31.3% lighter 3 weeks post treatment compared to mice injected with the empty vector. Mice receiving the expression vector encoding mutations at C203S, C210S, or C273S ate 27.9, 28.0, and 33.9% less food and weighed 25.5, 20.4, and 30.3% less, respectively, than the control mice receiving the empty vector. Food intake and body weight were similar among empty vector treated mice and mice treated with an expression vector encoding C21 1S, C240S, C244S, C274S, C305S, or C307S. These data demonstrate that the first disulfide bond between C203 and C210 is not required for efficacy and suggest the amino-terminus of mature GDF15 can be manipulated. Interestingly, C273, which forms the interchain disulfide bond, is also not required for efficacy of GDF15.
[00126] The structural data, combined with the functional data from the cysteine mutagenesis studies suggested that the amino terminus of GDF15 and potentially the carboxy terminus could be modified to extend the half-life of GDF15. To test this, mammalian expression vectors were constructed that encoded N -terminal Fc-GDF15 and C-terminal fusion proteins as well as mature GDF15 protein. Mice receiving a single hydrodynamic injection of an expression vector encoding mature GDF15 consistently ate approximately 25% less food than mice receiving a hydrodynamic injection of empty vector (Table la). By the end of 4 weeks these mice weighed 28.9% less than the control mice (Table lb). Mice injected with a vector encoding an N-terminal Fc-GDF15 fusion protein ate about 25% less food over the first two weeks than the empty vector treated mice; however, by week 3 Fc- GDF15 treated mice were eating similar amounts of food as controls. Body weights of Fc- GDF15 treated mice also initially decreased but then started to rebound such that by 4 weeks post injection, the Fc-GDF15 mice only weighed 9.8 percent less than empty vector treated mice. In contrast, mice injected with a vector encoding a C-terminal GDF15-Fc fusion protein consumed similar levels of food and gained weight exactly like empty vector treated mice throughout the duration of the experiment. High plasma GDF15 levels were detected at I and 3 weeks post mjection for the mature GDF15 treated group (2,6 and 1.8 nM, respectively). Plasma GDF15 levels were 2.8 nM one week post dose but were undetectable 3 weeks post injection of the vector encoding Fc-GDF15. No GDF15 was detected at any time in mice treated with the GDF15-Fc expression vector. In summary, these data indicate that the C -terminal fusion of GDF15 was inactive, while N-terminal fusion of GDF15 was active. However, the loss of expression of GDF15 in the Fc-GDF15 fusion group suggests that Fc fusions to GDF15 may not be suitable therapeutics.
[00127] "fable la.
Weekl . Food Consumptio sn (grams)
Empty V ector Mature GDF 15 Fc-GDF 15 GDF15-Fc
Week 1 15.1 ± 0.62 l l.6i0.34 (- l l .7ri.- .52 {-· 15.7iO.69 (3.8)
22.3) 22.9)
Week 2 17.4 ± 0.73 13.1.-1-0.47 (- 13. 1 - 2.64 {-· 17.5i0.72 (0.2)
24.7) 24.8)
Week 3 18.0 ± 0.56 13.7i0.51 (· 16.8i0.49 (-6.4) 18.6i0.54 (3.4)
24.1)
Week 4 18.4 ± 0.6 14.1 ±0.62 (· 17.6i0.18 (-4.3) 18.1i0.52 (-1.5)
23.4)
Mean ± SEM (Percent Change Relative to Empty Vector) Table lb. height (grams)
Empty Vector Mature GDF 15 Fc-GDF15 GDF15-Fc
31 .1 +1 .1 31 .7±0.8 31 .0±0.7 31 .6±0.8
30.7±1 .1 28.9±0.7 28.3±0.8 31 7±1.1
32.5±1 .5 2 ί. ί±0.5 29.4±0.6 33.3±1.1
34.2+1 .7 26.6+0.5 30.9+0.5 35.5+1.2
36.7+1 .8 26.1 +0.6 33.1 +0.6 37.3+1.4
Mean ± SEM
[00128] Based upon the opposing dimerization orientations of Fc and GDF 15 and the loss of detectable plasma GDF 15 in the Fc-GDF15 group, we suspected that Fc-GDF15 fusion proteins would be prone to aggregation, likely resulting in animals mounting an immune response against the Fc~GDF15 fusion protein. To determine if Fc-GDF15 fusion proteins are prone to aggregation, an Fc-GDF15 fusion protein was expressed in HEK293 cells. While the Fc-GDF1 fusion protein was expressed, a large proportion of the protein migrated close to the origin when analyzed under non-reducing conditions on a polyacrylamide gel, consistent with aggregation of the protein. (FIG. la) Further analysis by size exclusion chromatography confirmed the protein was aggregated.
[00129] In studies to identify GDF15 fusion proteins that were active but did not aggregate mammalian expression vectors encoding an N-terminal human seram albumin- [GGGGS] 3-GDF15 (HSA-GDF15) fusion protein and a mouse seram albumin-[GGGGS]3 - GDF15 (MSA-GDF15) were transfected into HEK293 cells. Unlike the Fc-GDF15 fusion protein, both HSA-GDF15 and MSA-GDF15 migrated at the expected molecular weight when analyzed under non-reducing conditions on a polyacrylamide gel and by size exclusion chromatography. (FIG. lb) Unexpectedly, expression of both albumin-GDF 15 fusion proteins in mammalian cells was also about 1000X greater than that for the mature GDF15 protein.
[00130] To determine if fusion of albumin to the N-terminus of GDF 15 resulted in an active protein, Sean mice were dosed with a single subcutaneous injection of vehicle or 99 micrograms (-0.6 nmol of dimer) of MSA-GDF15 ( 197-308), MSA-GDF15 (197-308, C203S, C210S), MSA-GDF15 (211-308), or MSA-GDF15 (197-308, C273S). Compared to vehicle treated animals, food intake was reduced by 34, 34, 42, and 25 percent in animals receiving MSA-GDF15 (197-308), MSA-GDF15 (197-308, C203S, C210S), MSA-GDF15 (197-308, C273S), and MSA-GDF15 (211 -308), respectively. These data clearly demonstrate that fusion of albumin to the N-terminus of GDF15 results in biologically active protein .
[00131 ] Fusion of albumin to the N-terminus of GDF 15 also greatly increased the plasma half-life compared to the mature GDF15. The plasma half-life of mature GDF 15 was ~lh while the plasma half-life of the N-terminal serum albumin-GDF 15 fusion proteins was ~50h. Once weekly administration of MSA-GDF15 for 3 consecutive weeks greatly enhanced weight loss in obese mice compared to mature GDF15 at equivalent doses (0.6 nmol dimer/mouse, s.c). Twenty eight days after the first dose and 2. -weeks after the previous dose, MSA-GDF15 treated mice lost 12.8 percent of their starting body weight while, over the same duration, vehicle treated and GDF 15 treated mice increased their starting body weight by an additional 10.9% and 5.6%, respectively. Analysis of body composition indicated that the weight loss induced by MSA-GDF15 is largely from fat mass with sparing of lean mass. On day 23 post initiation of dosing, the fat mass of MSA-GDF 15 treated mice was 18.3% compared to 25.2% and 24.5% for vehicle and GDF15 treated mice, respectively. Lean mass in MSA-GDF15 treated mice was 55.6% of their body weight compared 51.5% and 52% for vehicle treated and GDF15 treated mice, respectively.
[00132] The HSA-GDF15 fusion was also biologically active. Obese mice receiving a single subcutaneous dose (3 mg/kg s.c.) of HSA-3x4GS-hGDF 15( 197-308) ate 31% less food over 24h than vehicle-treated controls while MSA-GDF15 treated mice ate 27% less than vehicle controls. HSA-GDF15 fusions with different peptide linkers between albumin and GDF15 were also biologically active. Obese mice were created with a single subcutaneous dose (3 mg/kg s.c.) of HSA-no linker-GDFiS, HSA-GGGGS-GDF15, HSA-GPPGS ate 22, 27, and 21% less food over 24 hours than vehicle treated mice. In summary, these data indicate that fusion of albumin to the N -terminus of GDF15 with various linkers are biologically active.
[00133] The ammo terminus of GDF15 contains proteolytic (R198) and deamidation sites (N199) that may adversely impact development (e.g., stability) of a therapeutic albumin- GDF15 fusion protein. During purification, we discovered that -58% of the HSA-3x4GS- hGDFl 5(197-308) was proteolysed between residues R198 and N199 and that -67% of residue N 199 was deamidated. In contrast, no proteolysis or deamindation was observed at these sites when the albumin-GDF15 fusion protein was mutated to HSA~hGDF15(197- 308),R198H,N199A. To determine if these sites are required for GDF15 activity, a series of albumin-GDF15 mutants were produced and tested for in vivo activity. Obese mice were treated with a single subcutaneous dose (3 mg/kg s.c.) of HSA-3x4GS-hGDF15(197-308), HSA-hGDF ! 5(197-308),R198H, HSA-hGDF15(197-308),N199E, or HSA-hGDF15(197- 308),R198H,N199A. Cumulative food intake over the course of 6 days was reduced by 29%> in mice treated with HSA-3x4GS-hGDF15(197-308) compared to vehicle controls. Food intake over the same time period was reduced by 35, 28, and 25% in obese mice treated with HSA-hGDF15(197-308),R198H, HSA-hGDF15(197-308),N 199E, or HSA-hGDF 15(197- 308),R198H,N199A relative to controls. Over the 6 days, the body weight of vehicle treated animals increased by 6.1%, while body weight was reduced by 4.7% in HSA-3x4GS- hGDFl 5(197-308) treated mice. Body weight was reduced by 5.2, 4.4, and 3.2 in obese mice treated with HSA-hGDF15(197-308),R198H, HSA-hGDF15(197-308),N199E, or HSA- hGDF15(197-308),R.198H,N199A, respectively. Thus, fusion proteins containing mutation of these post-translational modification sites in the amino terminus of GDF15 retain biological activity.
[00134] As the reeeptor(s) for GDF 5 is unknown, a series of structure-guided site- directed mutants were designed to elucidate domains and residues essential for function and those amenable to modification. GDF15 contains the fingers domain, knuckle domain, wrist domain, the newly discovered N-terminal loop domain, and back-of-hand domain . GDF15 analogs that disrupt the newly discovered amino-terminus region of GDF15, e.g. MSA- GDF15(211-308) and MSA-GDF15 (C203S, C210S), still retain biological activity- demonstrating that this loop is not required for activity. The knuckle, finger, and wrist region of TGFbeta superfamily members are known to be important for receptor binding and signaling. To determine if these regions of GDF15 are critical for activity, key surface residues were mutated to a large side-chain containing amino acid, arginine, to attempt to induce a loss of function. MSA-GDF15 fusion proteins containing mutations in GDF15 residues leucine 294 (knuckle), aspartic acid 289 (fingers), giutamine 247 (wrist), and serine 278 (back of hand) were produced and then dosed subcutaneously to obese mice (3 mg/kg s.c). A single subcutaneous injection of MSA-GDF15 reduced food intake over the course of 7 days by 30% compared to vehicle control. Food intake was also reduced relative to control by the finger region mutant (D289R), the wrist mutant (Q247R), and the back of the hand mutant (S278R) by 22, 14, and 24%, respectively. In contrast, the knuckle region mutant (L294R) increased food intake by 17% relative to control. Over the course of the 7 days, body weight increased in the vehicle and L294R treated mice (2.2 and 6.3% respectively) while body weight decreased in by 6,6, 5.7, 5.7, and 5.4% in the MSA-GDF15, MSA-GDF15 (D289R), MSA-GDF15 (Q247R), and MSA-GDF15 (S278R) treated mice, respectively. These data indicate that L294 and the knuckle region of GDF15 are critical for activity, and likely interact with the GDF15 receptor. Mutations in the other regions of GDF15 are tolerated.
SEQUENCES
Human GDF15 preproprotein (SEQ ID NO:1)
MPGQELRTW GSQMLLVLLV LSWLPHGGAL SLAEASRASF PGPSELHSED SRFRELRKRY EDLLTRLRAN QSWEDSNTDL VPAPAVRILT PEVRLGSGGH LHLRISRAAL PEGLPEASRL HRALFRLSPT ASRSWDVTRP LRRQLSLARP QAPALHLRLS PPPSQSDQLL AESSSARPQL ELHLRPQAAR GRRRARAR G DHCPLGPGRC CRLHTVRASL EDLGWADWVL SPREVQVTMC IGACPSQFRA A MHAQIKTS LHRLKPDTVP APCCVPASYN PMVLIQKTDT GVSLQTYDDL LAKDCHCI
Human Serum Albumin preproprotein (SEQ ID NO: 2)
>sp ί P02768 I ALBU_HUMA Serum albumin 03=Homo sapiens GN=ALB PE=1 SV=2
VJV FI SLLFLFSSAYSRGVFRRDAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPF
EDHV LVNEVTE AKTCVADESAENCDKSLHTL GDKLCTVATLRETYGEMADCCAKQEP
ERNECFLQHKDD PNLPRLVRPEVDVMCTAFHD EET LKKYLYEIARRHPYFYAPELLF
FAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRL CASLQ FGERAFKA AV
ARL S Q R F P KAE FAEVS K L V D L T KVH TECCHGDLLE CAD D PAD LAKY ICENQDSISSKLK
ECCEKPLLE SHC I AE VEN D EM P AD L P S L AAD FVE S K D VC KN YAEAK DVF L GM F L Y E YAR
RHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFE
QLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLS V
LNQLCVLHEKTPVSDRVTKCCTESLWRRPCFSALEVDETYVPKEFNAETFTFHADICTL
SEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLV
.AA.3QAALGL Mouse igi chain V-I !i region MOPC 63 signa! peptide (uniprot P01661) (SEQ iD NO:3):
ETDTLLLWVLLLVWPGSTG
Human CD8A signal peptide (uniprot P01732) (SEQ iD NO:4): MALPVTALLLPLALLLHAARP Modified mating factor alpha- 1 signal peptide (uniprot P01 149) (SEQ ID NQ:5):
MRFPSiFTAVLFAASSALAAPA TTTEDETAQiPAEAVIDYSDLEGDFDAAALPLSNSTNNGLSSTNTTi ASIAAKEEGVQLDKR
His6-hGDF15{197-308|
Open reading frame(SEQ ID NO:6):
atggagacagacacgctg ctcctctgggtattg ctgctg tqggtaccagg tcc 54
accgg ccatca ccaccaccatcatg ccagaaa eggtgatca11gcccacttgga 108
cccgggaggtgctgtcggc11c ca ctgtcagggcatca ctcg agatctcggg 162
tgggeggactgggtgetttegccca gaga gtgcaagtca ctatgtgc 11ggt 216
gcgtgcccgtcgcaa 1cagag ctgecaacatgeatgcccaga caaaacg ge 270
t tgcaccggctgaaacccgacacagt ccccgct ccg tgctgcg geegg eg beg 324
tataaccccatggtcctcatccagaaaa ccgatacgggagtgtcattgcagaca 378
tatgatgaccttttggccaaggattgccactgtatc 14
Expressed protein (SEQ ID NO:7):
HHHHHHAR G DHCPLGPGRC CRLHTVRASL EDLGWADWVL SPREVQVTMC IGACPSQF'RA 60 A MHAQI KTS LHRLKPDTVP APCCVPASYN PMVLIQKTDT GV5LQTYDDL LAKDCHCI 118
His8-TEV-hGDF15(197-308)
Open reading frame (SEQ ID NO:8):
abggagacagacacgetgcbcctctgggtattgctgctgtgggtaccaggatcc 54
acegg cca caccaccaeca teatcaec egg eggaagcgaga ccbg b e c 108
cagggcgccagaaacggtgatcattgcccacttggacccgggaggtgctgtcgg 162
cttcacactgtcagggca tcactcgaagatc cgggtggg egg c gggtgett 216
tcgcccag ga agtgcaa gtcactatgtgcattggtgcgtgcccgtcgcaattc 270
agagctgccaacatg cat gcccagat caaaacgagct, bgcaccggebgaaaccc 324 gacacagtcccc ctccgt ctgcgt ccggcg cgtataaccccatggtcctc 378 atccagaaaaccgatacgggagtgtcattgcagacatatgatgacc tttggcc 432 aagga tgcca ctgtatc 450
Expressed protein (SEQ iD NO:9):
HHHHHHHHGG SENLYFQGAR NGDHCPLGPG RCCRLHTVRA 3LEDLGWADW VLSPREVOVT MCIGACPSQF RAANMHAQIK TSLHRLKPDT VPAPCCVPAS YNPMVLIQKT DTGVSLQTYD DLLAKDCHCI hGDF15(197-308) (Yeast expression)
Open reading frame (SEQ ID NO: 10):
a gagattcccttccatctttacagcagtgttatttgctgctagttecgcccta 54 g cagetccagctaacacg ctacbgaaga bgaaacaqcccaaa tcccag cagaa 108 gcbgttattgactacagcgact bggaggg tgacttcgacgcagctgctctcccc 162 c111ctaa11ctactaataatggactgag11ccacaaatactacca11gcctca 216 a11gccgccaaggaggaaggtgtccaactggacaaaagagctagaaatggtgac 2 0 cactgccctttaggtcccggcagatg tgtcgt tgcatactgtgagagcatca 324 ctggaggatctaggatgggctgattgggtgttg ctccaagggagg t caggta 378 actatgtgta aggagca tgecea cccagttcagggc gcaaaca tgeacget 432 caaa tcaaaacaageettcatcgtttgaaacctgatacagtaccggcaccatgt 486 tgtgttccagcttca ataaccctatggtcctgatccaaaagaccgacactggt 540 gtttcgttgcaaacgtacgatgatttgttggctaaggattgccattgtatt 591
Expressed protein (SEQ ID NO: 1 1):
ARNGDHCPLG PGRCCRLHTV RASLEDLGWA D VLSPREVQ VTMCIGACPS QFRAANMHAQ IKTSLHRLKP DTVPAPCCVP ASYNPMVLIO KTDTGVSLQT YDDLLAKDCH CI hGDF15(197-308) (E. co// expression)
Open reading frame (SEQ ID NO: 12):
atgcatcaccatcatcatcaccaaaaacctgttggcg11gaagagecggtctac 54 gatac gcaggtcgtcctc ttttgggaatccg ccgaag gcacccccagtea 108
accctcaagcttccccatgaccgcggagaagatgacattgaaacaacgctgcgc 162
gatctqecteg taaaggcgattgteg c ctggaaacca.eetaggtccqgtgteg 216
ggca t ttacattaaaccagqtcccg tctatta ccaagactacactgg teeggtt 270
taccatcgtgcacctctggaattctttgatgaaaccc a 111gaggaaaccact 324
aaacgtattggeegtgtaaccg 11 cggacgggaaactgtacc catctacgtg 378
gaggttga tggegaga tectge tgaaacaqgcgaag cgcggaacccctcg cacc 432
ctgaaatggacccgtaacaccactaactg tccactg gggtcactagttgcgea 486
cgcaacggtgatcattgtccgctgggtcctggtcgctgctgccgtctgcatacg 540
gtgcg tgcgagcctggaag tctgggctgggcagattggg tcctgtccccaege 594
gagg t tcaag tgacgatg tqcattgg tgcgtg cccgag ccagttccg tgeggee 648
a ca tgcacgcacagattaagacctctctgca cegtetgaaaccggacacegtg 702
ccgg ctccgtg 11gtgtcccggcca g ctataa tccgatg g 11ctga tccaaaa g 756
accg c ccggcg11 gcttgc ga c11acga cgatctgttggcga aagactgt 810
cactgcatc 819
Expressed protein (Protein 1) (SEQ ID NO: 13):
MHHHHHHQKP VGVEEPVYDT AGRPLFGNPS EVHPQSTLKL PHDRGEDDIE TTLRDLPRKG 60
DCRSGNHLGP VSGIYIKPGP VYYQDYTGPV YHRAPLEFFD ETQFEETTKR IGRVTGSDGK 120
LYHIYVEVDG EILLKOAKRG TPRTLKWTRN TTNCPLWVTS CAR GDHCPL GPGRCCRLHT 180
VRASLEDLGW ADWVLSPREV QVTMCIGACP 3QFRAANMHA QI TSLHRL PDTVPAPCCV 240
PASY PMVLI QKTDTGVSLQ TYDDLLAKDC HCI 273
GDF15 after Npro auto cleavage (Protein2) (SEQ ID NO:14):
ARNGDHCPLG PGRCCRLHTV RASLEDLGWA DWVLSPREVQ VTMCIGACPS QFRAANMHAQ 60 IKTSLHRLKP DTVPAPCCVP A3YNPMVLIQ KTDTGV3LQT YDDLLAKDCH CI 112 SA-hGDF15(197-308
Open reading frame (SEQ ID NO: 15):
Atggagactgataccctgetcctctgggtgetgettctctggg tccctgg ctc Accgg cgaagcccacaagtccgagatcgcccatcgctataatgctc1 gg gaa 108 Cagca b b bcaagqgactgg bgcbgab bgccb cbcccag baccbccaaaaggcc 162 Agcta bgatga g cacgccaagctcgtcc aga ag bcaccgactttgcbaagacb 216
Figure imgf000056_0001
Gggga caagctgtgcgct bbccca a cctccgcgagaattacggtgagctggcc 324 gactgttgcaccaaacaggagccagagcggaacgag b,gcttccb bcaacacaaa 37 S g bgacaabccttcacbgccbccbtt cga cggcccgaggcag ggcaabg bgc 432 a c bagcbtcaaggagaacccaa ccacctbcatggga cactaccbccabgaggtc 486 gctagacggcatcccbactb.ctatgccccagagcttctgt bbabgcagaacag 540 bacaa b,gagatcc bgacccagbgctg b,getgaggcbgataaggagag ctgcctg 594 accccaaagctcgacggag bgaaggaaaaggcbcbtgtg tecageg bgcggcag 648 cgcatga g g cbc11ca a tgc ga agtttggggagcgcgcc11ca aagcctgg 702 gecg tggee g a c tgtcccagacc1 1cctaa tgc gact ttgccg ga eacc 756 aagctcgct ctgacctga cc aggtcaac a agagtgttgcc cggagatctg 810 ct,cgaabgcgccgacgaccgcg c bgagcb b,gcbaag b,acabgbgcgaaaaccag 864 gcaacca b bctagcaagctgcagacctg ttgtgataagcctctgctgaagaaa 918 gcccabbgcctcagcgaggtcg catg c ct tgccggcag cctccccgct 972 atcgccgctgac11cgtgg ggaccaagaagtgtgc agaatt cgccgaggct 1026 aaggacgtg1 cc tbggtactttcctctacgag t,abagccggaggcaccctgac 1080 bacag cgbgbcbcttctgcb bcggcbcgecaagaagbaegaagecaccc cgaa 1134 aaatg c gcgccgaagcaaa tccgccagcttg t bacgggacbgtgctqgcbgag 1188 tttc gcccctgg tggaagagecca gaacctcgtcaag a ccaactgegaec11 1242 tacgagaaactgggtgaatacgggtttc gaa tgccattctggtgcggt cacc 1296 cagaaggcaccacaagtgtccaccccaacccttgtcgaggcagcccgeaaccb b 1350 gqacgcgbcgggaccaagtgttq taccctgcccgaggaccaacgcctgccctgc 1404 g bcgagga c baccttagcgcc b bctga a cagagtctgtctg ctccatg aaaag 1453 a cccctgtgtctgagcacgtgaccaagtgctg11c ggctca ctggtggagagg 1512 aggcc11gc11 1ctgccctga ccgtggacga acctacgtgccca ggag11c 1566 aaagct,gaaaccb, bcac111,ccabtcagacatct,gbacccb,ccccgaaaaggaa 1620 aagcaaatcaagaagcagaccgcccttgctgaactggtgaagcacaagccaaag 1674 gccaccgccg acaa tcaaga tgtgatggacgacttcgctcag11cctcgac 1 28 acttgctgcaaagccgccgacaaagatacctgtttctcaaccgaggggccgaac 1782 ctggtgactagagccaaggacgccctggccggaggaggtggttctggcggtggt 1836 ggttccggcggaggagga tctgccaggaatggagatcactgcccactcggaccg 1890 ggacggtg1tgtcgcctgcacactgtgcgcgcatctcttgagg tctggg tgg 1944 gctgattgggtgctc ctcccagagaggtgcaagtcaccatgtgcattggcgcc 1998 tgcccctcccaattcagggcagctaacatgcatgctcagatcaagactagcctg 2052 cacaggctgaagcccgacactg ccctgccccatgttgtgtgccggcctcctat 2106 aaccc atggtcctgatcc aaagaccgataccggagtgtca c11caga c11ac 2160 gacga ctgcttgcaaaagactgcca 1gcatc 2193
Expressed pre tein (SEQ ID h 0: 16):
EAHKSEIAHR YNALGEQHFK GLVLIAFSQY LQKASYDEHA KLVQEVTDFA KTCVADESAA 60 NCDKSLHTLF GDKLCAI PNL RENYGELADC CTKQEPERNE CFLQHKDDNP SLPPFERPEA 120 EAMCTSFKEN PTTF GHYLH EVARRHPYFY APELLYYAEQ YNEIL QCCA EADKESCLTP 180 KLDGVKEKAL VSSVRQRMKC S3 QKFGERA FKAWAVARLS QTFPNADFAE ITKLATDLTK 240 V KECCHGDL LECADDRAEL AKY CENQAT I SSKLQTCCD KPLL KAHCL SEVEHDTMPA 300 DLPAIAADE"V EDQEVCKNYA EAKDVFLGTF LYEY3RRHPD YSVSLLLRLA KKYEATLEKC 360 CAEANPPACY GTVLAEFQPL VEEPKNLVKT NCDLYEKLGE YGFQNAILVR YTQKAPQVST 420 PTLVEAARNL GRVGTKCCTL PEDQRLPCVE DYLSAILNRV CLLHE TPVS EHVTKCCSGS 480 LVERRPCFSA LTVDETYVPK EFKAETFTFH 5DICTLPEKE KQIKKQTALA ELVKH PKAT 540 AEQLKTVMDD FAQFLDTCCK AAD DTCFST EGPNLVTRAK DALAGGGGSG GGGSGGGGSA 600 R GDHCPLGP GRCCRLHTVR ASLEDLGWAD LSPREVQV TMCIGACPSQ FRAANMHAQI 660 KTSLHRLKPD TVPAPCCVPA SYNPMVLIQK TDTGVSLQTY DDLLAKDCHC I 711 SA-hGDF15(211 -308)
Open reading frame (SEQ ID NO: 17):
atggagactgatacccttctgctctgggtgcttctgctg tgggtgccaggatcc 54 accggcgaagcccataagtcggaaatcgcacatcggtacaacgcgctcggggaa 108 c gcac11c aaggeettgtcctgatcgegttctccc atacc11caaaaggcc 162 t cgtacgatgaacatgctaagctcgtccaagaggtgaccg cttcgc aagact 216 tgtg tggccgatgagtcgg cagcca ctgcgacaagagcc cc cac et ct c 270 ggag a. caagctgtgcgca a.11cctaa. tctgcg cgagaa11acgggg a.actggcg 324 gactgctgtactaagcaagagccggaacgcaatgagtgcttcctccagcataag 378 gacga caaccc11ccctccctcccttcgaacgcccagaggccgaagcgatgtgt 432 acctccttcaaggaaaacccgaccacg111at gggaca11acctccacgaagtc 486 gccagacgqcatccc acttctacgcgcc gagctgctct ttacgccg acag 540 tacaacgagatcctgacgcagtgttgcgctgaggcagacaaggagagctgcttg 594 accccgaaactcgatggagtgaaggagaaggccctggtgagcagcgtgcgccag 648 cggatg agtgct atega tgcagaagttcggcg qagag ctttcaaggcgtgg 02 gccgtggccaggctgtcacagacctttccaaacgcggatttcgcagagatcacc 756 aagctggccactgacctca. c taaag tcaacaaggaatgctqccacggagatctc 810 11gg aatgtgccgatgacagggccg aa11ggctaagtaca tgtgcg aaaatca a 864 gcta cca11agctcgaagctgcaga cgtqctqcqataaqccqctgctgaagaa g 918 gctca11gcctgtccgaggtgg gcacgacaccatg c agecgacctcccggcc 972 a egcagcagattttq ggaggatcaggaagtgtgcaagaattacgcagaagct 1026 aaggatgtgtttcttgggactt ttctc acgagtacagccggagacacccggac 1080 tatagcgtgtccctgctqctqcqc11qqctaag aatacqaa gctacccttgaa 1134 aaatg c.tgcgcagaqgccaaccctccggcttgctacggaac.tgtgctggctgag 1188 ttccagccgctcgtcgaagaaccgaagaatctcgtgaaaac.qaactg c.gatctg 1242 tacgaqaaattgqgagagtatggatttcaaaatqccattctggtccgct cact 1296 caga aagctcca caagtctccacgccgaccctggtcgaagcggcgaggaacctt 1350 ggacgcgtggqaa;cc agtgctqta ccctqccggaggaccagegcc11ccgtgc 1404 gtcgaggattacttg tcagega tcctcaac.cgcgtg tgc11gc11catgaaaag 1458 ac eccgtg tcggaacacgtgacgaagtgctgctccggttcgctggtggaaaga 1512 cgcccgtg c 11ctcggccctga c tgtgg a cgaaacctacgtcccaaaag ag 11c 1566 aa;gqctqaa;acc11ca;c111cca;ctcqqa catctqca;ctctccccqaaa aggaa 1620 aaacagatcaagaagcagactgccctggcagagctggtgaaa cacaagcccaag 1674 qcgacqqccgaac.aqctgaaaaccgtgatggacqactttgcccaa11c.ct cgac 1728 acttg tgt aaqcagceg taaggacacttgcttctccactgaggg ccctaac 1782 ctggtcacccgggctaaggacgcgctcgcgggaggaggtggcagcggaggaggc 1836 ggtag cggagg cqgaggg tcatgtcggctgcacaccgtgcgggcatcgcttgaa 1890 gatttgggatgggccgactgggtgctgtcaccgcgggaagtgcaagtgaccatg 1944 tgcatcggcgcctgcccgtcgcag1t agagcagcgaata gcacgcgcaaatc 1998 aaga cttcgctgc caga ctg agccggat ctgtccctgcaccatgctgcgtc 2052 cctgcctcatacaacccaatgg tgctgatccagaaaaccgacaccggagtgtcg 2106 cbccagacb bacgacqaccttcbggccaaqgactgbcattgba be 2151
Expressed protein (SEQ ID NO: 18):
EAHKSEIAHR YNALGEQHFK GLVLIAFSOY LQKA.SYDEHA KLVQEVTDFA KTCVADESAA 60
NCDKSLHTLF GDKLCAI PNL RENYGELADC CTKQEPERNE CFLQHKDDNP SLPPFERPEA 120
EAMC 3 KEN PTTFMGHYLH EVARRHPYFY APELLYYAEQ YNEILTQCCA EADKESCLTP 180
KLDGVKEKAL VS3VRQRMKC SSMQKFGERA FKAWAVARLS QTFPNADFAE ITKLATDLTK 240
VNKECCHGDL LECADDRAEL AKYMCENQAT ISSKLQTCCD KPLLKKAHCL SEVEHDTMPA 300
DLPAIAADFV EDOEVCKNYA EAKDVFLGTF LYEY3RRHPD YSVSLLLRLA KKYEATLEKC 360
CAEANPPACY GTVLAEFQPL VEEPKNLVKT NCDLYE LGE YGFQNAILVP. YTQKAPQVST 420
PTLVEAARNL GRVGTKCCTL PEDQRLPCVE DYL3A.ILNRV CLLHEKTPVS EHVTKCCSG3 480
LVERRPCFSA LTVDETYVPK EFKAETFTFH SDICTLPEKE KQIKKQTALA ELVKHKPKAT 540
AEQLKTVMDD FAQFLDTCCK AADKDTCFST EGPNLVTRAK DALAGGGGSG GGGSGGGGSC 600
RLHTVRASLE DLGWADWVL3 PREVQVTMCI GACPSOFRAA NMHAQIKTSL HRLKPDTVPA 660
PCCVPASYNP MVLIQKTDTG VSLQTYDDLL AKDCHCI 697
HSA(25-609),C34S,N503Q~hGDF15{2-i 1 -308}
Open reading frame (SEQ ID NO: 19):
atgga actgacactttgctgctttggg11ctgctcc111gggtccctggatca 54 actgg tgatgctcacaagtccgaagtggcccaccgtttcaaggatctgggtgag 108 gaaaacttcaaggctctcgbcctgabcgcat11gcgcagtacctccagcagtcg 162 ccattcgaggaccatgtgaaactcg tcaacgaag bgaccgagtttg cbaagacb 216 tgcgtcgctgacgagtcagcagagaabtgtga caaatccctgcacaccctgttc 270 ggcgataagctctgcactgtggcca ccctccgggaaaettaeggegagatggcg 324 gattg tgcgcgaaa aggaacccgagcgcaatgagtg11 cctgcagcacaag 378 gacgacaacccgaacctcccacggctqgtgagg ccggaag bggacg bcatgtg c 432 accgcatttca tgacaacgaagaga ctttcctgaagaagtacctgtacgaaatc 486 gctcggagacatccgtac1 ctacgcgccggaactcctct ctttgc aagegg 540 tacaaggcagcctttactgaatgetgccaggccgccgacaaagcggcgtgtctg 594 ctgccgaaactggacgagctgagagatgaaggaaaggctagctcggccaagcag 648 eggttgaaa bgegea begetccaaaagtteggagaaagagct bcaagg ccbgg 702 gcagtggcgcggctctcgcagcgcttccctaaggcagagttcgccgaggtcagc 756 aagttggtgaeggacctgactaaagtccataccg atgttgccaeggagatctg 810 ctegaatgcgccgatgacegggeegacctggcgaagtacatttgtgagaaccaa 864 gattcaatttcgagcaag t tgaaggagtgctg cgaaaag ccgttgct tgagaag 918 tcgcactgcatcgcagaagtcgaaaacgatgagatgcctgccgacttgccgagc 972 ctggccgccgatttcgtggagagcaaagacgtgtgcaaaaattacgccgaggcc 1026 aaggacgtgttcctgggaatgttcctgtacgaatatgcgcgacgccacccagac 1080 tacagegtggtcctgctgctccgccttgctaaaacttacgaaaccacgctggag 1134 aaatgctg tgccgcagccgacccacatgag tgetaegcaaagg tgttcgacgag 1188 tttaaaccccttgtggaagaaccgcagaa tctgatcaagcagaactgcgagctg 1242 ttcgaacaactcggagaatacaagttccagaacgetctgettgtcagatacacc 1296 aagaaagtgccgcaagtgtccacgccaaccctggtggaag tctcacgcaacctg 1350 ggaaaggtcggaagcaagtgctgtaagcatcctgaagcaaagagaatgccatgc 1404 gcggaggactacctgtccgttgtcctgaatcaactctgcg tgctgcacgagaaa 1458 actccagtgtcggaccgcg tcaccaagtgttgcacggaa tcgctcgtgaatcgc 1512 aggccgtgettctccgccctggaagttgatgagacttacgtcccgaaagagttt 1566 caggeegaaaccttcacctttcacgcggacatctgcactctctctgaaaaggaa 1620 agacaaatcaagaag cagactg ccctgg tggagctgg tcaag ca taaaccaaag 1674 gcgaccaaggaacag ttgaaagecgtgatggacgatttcgctgccttcgtggag 1728 aagtgctgcaaggccgacgacaaggaaa c11gc111gccgaggaaggaaagaaa 1782 ctggtggccgcatcccaagccgcgctgggactcggaggtggtgggtcgggggga 1836 gggggctccggcggcggagggtcatg tcgeetccacaccg tgcgggcgtccctg 1890 gaaga tctggga tgggcega tggg tgctgtccccgcgcgaggtgcaagtgact 1944 atgtg ateggcgcgtgcccatcacaattcagggcagccaatatgcatgcacag 1998 atcaaaacctcgctccaccgccttaagccggacaccgtgcccgcgccctgctgc 2052 gtgcctgc11cctataaccctatgg ttctgatccaaaagaccgata ccggcgtg 2106 agcctgcagacctacgatgatctcctggccaaggactgccactgtatc 2154
Expressed protein (SEQ ID NO:20):
DAHKSEVAHR FKDLGEENFK ALVLIAFAQY LQQ3PFEDHV KLV EVTEFA KTCVADESAE 60 NCDKSLHTLF GDKLCTVATL RETYGE ADC CAKQEPERNE CFLQH DDNP NLPRLVRPEV 120 DVMCTAFHDN EETFLKKYL" EIARRHPYFY APELLFFAKR YKAAFTECCQ .AADKAACLLP 180 KLDELRDEG ASSAKORLKC ASLQKFGERA FKAWAVARLS QRFPKAEFAE VSKLVTDLTK 240 VHTECCHGDL LECADDRADL AKYICENQDS I 3SKLKECCE KPLLE SHCI AEVENDEMPA 300 DLPSLAADFV E3KDVCKNYA EAKDVFLGMF LYEYARRHPD YSVVLLLRLA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPQNLIKQ NCELFEQLGE Y"KFQNALLVR YTKKVPQVST 420 PTLVEVSR L GKVGSKCCKH PEAKRMPCAE DYLSWLNQL CVLHEKTPVS DRVTKCCTES 480 LVNRRPCFSA LEVDETYVPK EFQAE FTFH ADICTLSEKE RQIKKQTALV ELVKH PKAT 540 KEQLKAVMDD FAAFVEKCCK ADD ETCFAE EGKKLVAASQ AALGLGGGGS GGGG3GGGGS 600 CRLHTVRA5L EDLGWADWVL SPREVQVTMC IGACPSQFRA ANMHAQIKT3 LHRLKPDTVP 660 APCCVPASYN PMVLIQKTDT GVSLQTYDDL LAKDCHCI 698 SA~hGDF15(197-308),C203S,C21 OS
Open reading frame (SEQ ID NO:21):
a ggagactgataccct1ctgctctggg tgcttctgctgtggg gccaggatcc 54 aceggcgaagcccataagt.cggaaatcgcacatcggtacaacgcgctcggggaa 108 cagcacttcaaaggecttg cctgatcgcgttc cccaat ccttcaaaaggcc 162 tcgtacgatgaacatgctaagctcg tccaagagg tgaccg cttcg caaagact 216 tgtgtggccgatgagteggcagecaactgegacaagagcctccaca ctctcttc 270 ggagacaagctgtgcgcaa11cctaatctgcgcgagaattaeggggaactggcg 324 gactgetgtactaagcaagagccggaacgcaatgag gcttcc ccagca aag 378 gacgacaacccttccctccctcccttcgaacgcccagaggccgaagcgatg gt 432 acctccttcaaggaaaacccgaccacgtttatgggacattacctccacgaagtc 486 gccagacggcatccctac etaeg cgectgag cbgcbcb b acg ccgaacag 540 tacaacgagatcctg cgcagtgttgcgctgaggcagacaaggagagctgettg 594 accccgaaactcgatggagtgaaggagaaggccctggtgagcagcgtgcgccag 648 cggatgaagtgctcatcgatgcagaagttcggcgagagagctttcaaggcgtgg 702 gccgtggccaggctg b,cacagacctttccaaaegeggatttcgcagagatcacc 756 aagctggccactgacctcactaaagtcaacaaggaa bgc gcc cggaga be be 810 ttggaabgbgccgatqacagggccgaat qgctaag tacatgtgcgaaaa bcaa 864 gctaccattagctcgaagetgeagaegtgctgegataagccgctgctgaagaag 918 gctcab,tgectg b,eegagg b,ggagcacgacaccatgecagccgacctcccggcc 972 ateg c gcagab b ttgtggaggatcaggaagtg bgcaaga b acg cagaagcb 1026 aagga tgtgtttcttgggacttttctctacgag tacagccqgagacacccgga c 1080 tatagcgtgtccctgctgctgcgcttggctaagaaatacgaagctacccttgaa 1134 aaatgctgcgcagaggccaaccctccggcttgctacggaactgtgctggctgag 1188 bb,ccagccgctegtcgaagaaccgaagaab,ctegtgaaaacgaactgcgab,ctg 1242 b cgagaaa b bgggaqag abgqatttcaaaatgeca btctgg tccgctacact 1296 cagaaagctccacaaqtctcca cgccga ccctggtcgaagcgg cgagga a cc11 1350 ggacgcgtgggaaccaagtgctgtaccctgccggaggaccagcgccttccgtgc 1404 gtcgaggattacbtgtcagcgatectcaaccgcgtgtgctb,gcttcab,gaaaag 1458 actcccgtgtcggaacacg b,gaegaagtgetgcbeeggbbcgetggtggaaaga 1512 cgcccg gcttctcggccctgactg tggacgaaacctacg tcccaaaagagttc 1566 aaggcbga acc 1c c 1 cc c eggaea c gc c c ccccgaaaaggaa 1620 aaacagatcaagaagcagactgccctggcagagctggtgaaacacaagcccaag 1674 gcgacggccgaacagctgaaaaccgtgatggacgac ttgcccaattcctcgac 1728 acttgttg aaagcagccgataaggacacttgcttctccactgagggccctaac 1782 ctggtcacccgggctaaggacgcgctcgcgggaggaggtggcagcggaggaggc 1836 ggtagcggaggeggagggagcgctagaaaeggegaccacagcccgttggggcca 1890 ggtagatcatgtcggctgcacaccgtgcgggcatcgcttgaagatttgggatgg 1944 geegactgggtgctgtcaccgcgggaagtgcaagtgacca gtgeateggegcc 1998 tgcccg egcag tagag cagegaa atgcacgcgcaaa caagacttcgctg 2052 cacagactgaagccggatactgtccc gcacca gctgcg ccctgcctcatac 2106 aacccaatggtg ctgatccagaaaaccgacaccqgagtg tcgctccagacttac 2160 gacgaccttctggccaaggactgtca tgtatc 2193
Expressed pr tein (SEQ ID
EAH SEIAHR YNALGEQHFK GLVLIAFSQY LQKA3YDEHA KLVQEVTDFA KTCVADESAA 60 NCDKSLHTLF GDKLCAI PNL RENYGELADC CT QEPERNE CFLQH DDNP SLPPFERPEA 120 EAMCTSF EN PTTFMGHYLH EVARRHPYFY APELLYYAEQ YNEILTQCCA EADKESCLTP 180 KLDGVKEKAL VSSVRQRMKC S3MQKFGERA FKAWAVARLS QTFPNADFAE ITKLATDLTK 240 VN ECCHGDL LECADDRAEL A YMCENQAT ISSKLQTCCD KPLLKKAHCL 3EVEHDTMPA 300 DLPAIAADFV EDQEVCKNYA EAKDVFLGTF LYEYSRRHPD YSVSLLLRLA KKYEATLEKC 360 CAEANPPACY GTVLAEFQPL VEEPKNLVKT NCDLYE LGE YGFQNAILVR YTQKAPQVST 420 PTLVEAAR L GRVGTKCCTL PEDQRLPCVE DYLSAILNRV CLLHEKTPV3 EHVTKCCSGS 480 LVERRPCFSA LTVDETYVPK EFKAETFTFH SDICTLPEKE KQIKKQTALA ELVKHKPKAT 540 AEQL TVMDD FAQFLDTCCK AAD DTCF3T EGPNLVTRAK DALAGGGG3G GGG3GGGGSA 600 R GDHSPLGP GRSCRLHTVR A3LEDLGWAD LSPREVOV TMCIGACP3Q FRAANMHAQI 660 KTSLHRLKPD TVPAPCCVPA 3YNPMVLIQK TDTGVSLQTY DDLIAKDCHC I 711 SA-hGDF15(197-308|sC273S
Open reading frame (SEQ ID NO:23):
atggagactgatacccttctgctctgggtgcttctgctgtgggtgccagg tcc 54 aceggegaagcccataagtcggaaatcgcacatcgg acaacgcgc eggggaa 108 cagcact caaaggccttgtcctgatcgcq ttctcccaataccttcaaaaggcc 162 tegtaega gaacatgctaagctcgtccaagaggtgaccgacttcgcaaagact 216 tgtgtggccgatgagteggcagccaactgegacaagagcctccacactctc11c 270 ggagacaagctg tgcgeaa tcctaa ctgcgcgagaa11acggggaactggcg 324 gactgctgtactaagcaagagccggaacgcaatgagtgc1 cctccagcataag 378 gacgacaacccttccctccctcccttcgaacgcccagaggccgaagcgatgtgt 432 acctcc11caaggaaaacccgacca cgtttatgggaca11;acctccacgaagtc 486 gccagaeggcatccctacttct.acgcgcctgagctgctcta11acgccgaacag 540 tacaacgagatcctgacgcagtg11g cgetgaggcagacaaggagag ctgcttg 594 accccgaaactcgatggag tgaaggagaaggccctggtgagcagcg tgcgccag 648 cggatgaagtgctcatcgatgcagaagttcggcgagagagctttcaaggcgtgg 702 gecgtggeeag g ctgtcacagacctt tccaaa egeggatt tegeag aga eacc 756 aagctggccactgacctca ctaaagtcaac a ggaatgctgccacggagatctc 810 1 ggaatgtgccgatgacaggg ccgaa11ggctaag tacatgtgcgaaaa tcaa 864 gctaccattagctcgaagctgcagacgtgctgcgataagccgctgctgaagaag 918 gctcattgcctgtccgaggtggagcacgacaccatgccagccgacctcccggcc 972 atcgcagcaga11ttgtggagg;tcaggaagtgtgc;agaatt;cgcagaa;gct 1026 aagga tgtg111c11gggacttttctctacgag tacagccggagacacccggac 1080 tatagcgtgtccctgctgctgcgcttggctaagaaatacgaagctacccttgaa 1134 aaatgctgcgcagaggccaaccctccggcttgctacggaactgtgctggctgag 1188 11cca.gccgctcgtcgaagaaccgaa.qaatctcgtgaaa a. cgaactgcgatctg 1242 tacgagaaattgggagagtatggatttcaaaa tgccattctggtccgctacact 1296 cagaaagctccacaagtctccacgccgaccctggtcgaagcggcgaggaacc11 1350 ggacgcgtgggaaccaagtgctg accctgccggaggaccag cgccttccg gc 1 04 g tcgagga 11acttgtcagcga. tcctca a. ccgcgtg gc11gc11catg a.aaag 1453 a ctcccgtgteggaa cacgtgacgaagtgctgctccgg11cgctggtggaa;aga 1512 cgcccgtgettc cggccctgactgtggacgaaacctacg tcccaaaagagttc 1566 aaggctgaaacc 1cac11 ccactcggacatctgcactctccccgaaaaggaa 1620 aaacagatcaagaagcagactgccctggcagagctggtgaaacacaagcccaag 1674 gcgacggccgaacagctgaaaaccgtgatggacgactttgcccaattcctcgac 1728 acttg11gtaa agcagccga;taagga cac11gc11ctcca ctgagggccctaac 1782 c ggtcacccgggctaaggacg cgctegcgggaggaggt ggcageggaggagge 1836 gq tagcggaggcggagggagcgctagaaacggcgaccactgtccactggggcca 1890 ggtcggtgctgtcggctgcacaccgtgcgggcatcgcttgaagatttgggatgg 1944 gccgactgggtgctgtcaccgcgggaagtgcaagtgaccatgtgcatcggcgcc 1 98 tgcccgtcgcagtttagagcagcgaatatgcacgcgcaaatcaagacttcgctg 2052 c cagaetgaag ceggatactgtccc geacca teatgcg tcectg cctcatac 2106 aacccaatggtg c tg tccagaaaaccg c ccqgagtg cgctccaqacttac 2160 gacgaccttctg ccaagga tgtca tgtatc 2193
Expressed protein (SEQ ID NO:24):
EAHKSEIAHR YNALGEQHFK GLVLIAFSQY LQKASYDEHA KLVQEVTD A KTCVADESAA 60
NCDKSLHTLF GDKLCAI PNL RENYGELADC CTKQEPERNE CFLQHKDDNP SLPPFERPEA 120
EAMCTSFKEN PTTF GHYLH EVARRHPYFY APELLYYAEQ YNEIL QCCA EADKESCLTP 180
KLDGVKEKAL VSSVRQRMKC 3SMQKFGERA FKAWAVARLS QTFPNADFAE ITKLATDLTK 240
V KECCHGDL LECADDRAEL AKYMCENQAT ISSKLQTCCD KPLL KAHCL SEVEHDTMPA 300
DLPAIAADFV EDQEVCKNYA EAKDVFLGTF LYEY3RRHPD YSVSLLLRLA K YEATLE C 360
CAEANPPACY GTVLAEFQPL VEEPKNLVKT NCDLYEKLGE YGFQNAILVR YTOKAPQVST 420
PTLVEAARNL GRVGTKCCTL PEDQRLPCVE DYLSAILNRV CLLHEKTPVS EHVTKCCSGS 480
LVERRPCFSA LTVDETYVPK EFKAETF FH 5DICTLPEKE KQIKKQTALA ELVKHKPKAT 540
AEQL TVMDD FAQFLDTCCK AADKDTCFST EGPNLVTRAK DALAGGGGSG GGGSGGGGSA 600
RNGDHCPLGP GRCCRLHTVR ASLEDLGWAD LSPREVQV TMCIGACPSQ FRAANMHAQI 660
KT3LHRLKPD TVPAP3CVPA SYNP VLIQ TDTGVSLQTY DDLLAKDCHC I 711
HSA-3x4GS-hGDF15(197-308)
Open reading frame (SEQ ID NO:25):
atggaaaccgatactctgctgctgtgggtgcttcttctttgggtgccgggatca 54 accggcgatgcccacaagtcggaggtggcccatcggtttaaggacctcggggag 108 gagaac11caaagccctggtcctcatcgccttcgccc atacctccagcagtgt 162 cca1 cgaagatcacgtgaagc cgtgaacgaagtgactgaat 1gccaagact 216 tg gtcgcagacgaaagcgccgaaaactgcgacaag bcgttg ca tactctcbtc 270 ggggataagctgtgcactgtcgcaacccttagagagacttacggtgaaatggct 324 ga11gctgcgccaaacaag gccggagcgcaacgagtgc11cctcca cataag 378 gacgacaaccccaacctcccacgcctggtgcggcctgagg t,cgacg tcatgtgc 432 accgctttccatgacaatgaggagact,tttctcaagaag tatctgtacgagatc 486 gcccggaggcacccatactt tatgcaccggagctccttt etteg c aagegg 540 t caaggcggcgt bcactgaatgctg tcaggcagcagacaaggcag catgcctc 594 ctgccgaa ctggacgaa c11cgcgacgagggtaaagcgtegtccgcca gcag 648 cgcc1 aagtgcgcetcg 1 gcagaag1 1gg tgaa gcg cattcaaagcgtgg 02 gecg tegcaagae ttcg cageggt tcccaaaagcggag t ttgccgaggtgtcc 756 aaactggtcaccgacctga ccaagg tccacaccgagtgctgccacggcgatctg 810 ctcgaatgcgccgacgacegggetga ctcgcaaagtaca 11gcgaqaacca a 864 gaetcgatctcgtcaaaa ctgaaggaa;tgctgcgagaagccgctgttggaaaa g 918 agcca11g tategecgaagtggagaacg a tgaaatg cctgctga tctgcca ge 972 ctcgccgcagactttg tggagagcaaagacgtgtgcaagaactacgccgaagcg 1026 aaggacgtgtttctcgggatgt tcctctacgagtacqcgcgcaqgc ccctgac 1080 tactcagtggtcctgctg11gcggctggccaaaac11acqaa a ccaccctcgaa 1134 aagtg ctgcgcggctgeega tccaca tgaatg ctaegcaaaggtg11cgatgaa 1188 tttaagcctctgg tggaggaaccacagaacctga tcaag caaaattg tgaactg 1242 tttgaacagctgggagag tacaaa1 1cagaa tgeectgctggtcagatacact 1296 aagaaggtgccccaagtctccactccaaccctcgtggagg gtcacggaatctc 1350 ggcaaagtgggca;gcaaa tgctgta agcacccggaagca aa;gagga tgccctgc 1404 g ctgaagattacctg ccgtgg gctgaa tcagctt gtgtgc gcacg aaaag 1458 acgcctgtctccgaccgggtgaccaagtgctgt ccgaatcgctcgtgaa tege 1512 agaccctgc11ctccgctctcgaagtgga cgaaacttacgtcccgaagg ag11c 1566 aa;tgcggaa;acc11ca;cc 1cca;cgcgga catctgta;ccctgagcgaaaaagag 1620 cggcagat caagaaacag actgccctggtggaactggtg aagcacaagccgaag 1674 gcaacgaaggag cagctgaaggcgg tgatggatgactttgcageettcgtggaa 1728 aagtg t tgcaaggcag tg taaagaaacctg 1 tegeggaagaggggaagaag 1782 ttggtggctgccagccaggccgctctcggactgggaggtggaggatcaggaggc 1836 ggaggctccggaggagga ggctcqqctegcaatggegatca;1 qcccgctcqqa 1890 ccqqqacg ctgetgcagactgcataceg tccgege1 cc11ggaagatctggga 1944 tgggcgga t tgggtg t tgt caccaagagaggtgcaag tg cga tgtgta eggt 1998 g cgtgccc11cacag 11ccgcg ctgcga a catgca gcccaa a tcaaga ccagc 2052 ctgcaccggctgaagceggaca ctgtccca;gctccatgttgcgtgcccgca;tcq 2106 tacaacccgatggtgctcatccagaaaa ctgacactggagtctcactqcaa;acq 2160 t cg acgatttgctcgccaaaga11g ccactg ca11 2196 Expressed protein (SEQ ID NQ:26):
DAHKSEVAHR FKDLGEENFK ALVLIAFAQY LQQCPFEDHV KLVNEVTEFA KTCVADESAE 60
NCDKSLHTLF GDKLCTVATL RETYGEMADC CAKQEPERNE CFLQHKDDNP NLPRLVRPEV 120
DVMCTAFHDN EETFLKKYLY EIARRHPYFY APELLFFAKR YKAAFTECCQ AADKAACLLP 180
KLDELRDEGK ASSAKQRLKC ASLQKFGERA FKAWAVARLS QRFPKAEFAE VSKLVTDLTK 240
VHTECCHGDL LECADDRADL AKYICENQDS ISSKLKECCE KPLLEKSHCI AEVENDEMPA 300
DLPSLAADFV ESKDVCKNYA EAKDVFLGMF LYEYARRHPD YSWLLLRLA KTYETTLEKC 360
CAAADPHECY AKVFDEFKPL VEEPQNLIKQ NCELFEQLGE YKFQNALLVR YTKKVPQVST 420
PTLVEVSRNL GKVGSKCCKH PEAKRMPCAE DYLSWLNQL CVLHEKTPVS DRVTKCCTES 480
LVNRRPCFSA LEVDETYVPK EFNAETFTFH ADICTLSEKE RQIKKQTALV ELVKHKPKAT 540
KEQLKAVMDD FAAFVEKCCK ADDKETCFAE EGKKLVAASQ AALGLGGGGS GGGGSGGGGS 600
ARNGDHCPLG PGRCCRLHTV RASLEDLG A DWVLSPREVQ VTMCIGACPS QFRAANMHAQ 660
IKTSLHRLKP DTVPAPCCVP ASY PMVLIQ KTDTGVSLQT YDDLLAKDCH CI 712
HSA-GGGGS-hGDF15(197-308)
Open reading frame (SEQ ID NO:27):
atggccctccctgtcaccgccctgctgcttccgctggctc tctgctcca gcc 54 gctcggcccgatgctcataaatcagaagtggcgcacagatkcaaggacctcgga 108 gaagaaaactttaaagcactggtgctga egcc 1cgca caatacttgcagcag 162 tgcccg11cgaagatcacgtga actggtcaa cgaagtgaccgagttcgctaag 216 acctgtgtcgc gacgagagegcggaaaactgcgacaagtccc 1cacacgctg 270 ttcggcgataagctctgcacgg tcgcgactctgagggaaacctacggagagatg 324 gcagattgctgtgcaaagcaggaacctgagaggaacgaatgtttcctgcaacat 373 aaggacgacaacccaaatc11ccgcgcctegtgcgtceggaggtggacgtgatg 432 tgcacggccttccatgataatgaggaaactttcctgaaaaagtacctctacgaa 486 ategeccggagacacccgtatttctacgccccggagcttctgttcttcgcaaag 540 cgctacaaggcggcttttactgagtgctgccaagctgccgacaaagccgcatgc 594 ctgctgccaaagctcgatgaactcagggacgagggaaaggcatcctccgcaaag 648 cagcgcctgaaatgcgcctcactgcaaaagtttggagaa cgcgcattcaaggee 702 tgggcggtggcccggctcagccagaga11ccccaaggccgag111gecgaggtg 756 tccaagctcg11actgatc gaccaaagtccacaccgaatgctgtca ggagat 810 cttttggagtgcgccgacgacagagcggacctggccaag tacatctgcgaaaac 864 caggattcgatctcatctaagctcaaggagtgctgcgaaaaacccctgttggaa 918 aagtcgcactgta11gcggaagtggagaacgacgagatgcctgcagac11gccg 972 tcactggcggctgac11cgtggagtcgaagga cgtgtgcaa;aaactacgcggaa 1026 gcgaaggatgtctttctgggaa gttcctgt cgaa acgcacggcgcca ccg 1080 gactactcagttgtgctgttgctccgccttgctaagacttacgaaactaccttg 1134 gagaaatgctgcgccgccgccgatcctcacgaatgttacgcaaaagtg11cgac 1183 ga;g111aagcctctcgtggaaga;acctcagaat.ctga;tcaagcagaactgtgaa 1242 ctg11cgagcagctcggggaatacaag11ccagaatgcgctgctcgtccggtat 1296 actaagaaagtgccacaag tgtccaccccgactctggtcg agtgtcqcgcaat 1350 ctggggaaagtcggatcgaagtgctgcaagcatccggaggcgaaacgaatgccg 1404 tgcgcggaggattacctgtcggtggtgctgaa ccagctctgcgtgctgcatgaa 1458 aaga ccccggtgtccgaccgggtca ccaagtgttgcactgagtccctcgtgaa c 1512 c gcgcccttgcttctcggccctcgaagtcgatgagacttacg tgccaaaagag 1566 tttaatgccgaaaccttcacctttcacgctgacatctgcactttgagcg aaag 1620 gaaagacagattaagaagcagacggccctggtggaactcgtcaaacataaaccc 1674 aa;agctacgaaagagcagctgaa;agcagttatggacga1.1.1cgccgctttcgtg 1728 gaaaaatgctgcaaggccgacgataaggaaac11gtttcgccgaggaggggaag 1782 aagctggtcgcagcaagccaagccgctctgggtc11ggcggtggaggcagcgcg 1836 agga tggcgaccactgcccattgggaccgggacggtgttgcagactccacact 1890 gtccgggcttcactcgaggacctggg tgggccgactggg gctgtcgccccgg 1944 gaagtccaggtcaccatgtgcatcggagcgtgcccgagccaatttcgcgccgcg 1998 aacatgcacgcccaga tcaagacct cgctgcaccgcctgaagcctgacaccgtg 2052 ccagccccctgctgtq tgccgg cctcctacaacccaa tggtg cteatccaaaag 2106 accgataccggcgtgagcctgcaaacttacgatgatc11ctggccaaggactgt 2160 cactgcatc 2169
Expressed protein (SEQ ID NO:28):
DAHKSEVAHR FKDLGEENF ALVLIAFAQY LQQCPFEDHV KLVNEVTEFA KTCVADESAE NCDKSLHTLF GDKLCTVATL RETYGEMADC CAKQEPERNE CFLQHKDDNP NLPRLVRPEV 120 DVMCTAFHDN EETFLKKYLY EIARRHPYFY APELLFFAKR YKAAFTECCQ AADKAACLLP 180 KLDELRDEGK A3SAKQRLKC ASLQKFGERA FKAWAVARLS QRFPKAEFAE VSKLVTDLTK 240 VHTECCHGDL LECADDRADL AKYICENQDS ISSKLKECCE KPLLEKSHCI AEVENDEMP 300 DLPSLAADFV ESKDVCKNYA FAKDVFLGMF LYEYARRHPD YSVVLLLRLA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPONLIKQ NCELFEQLGE YKFONALLVR YTKKVPOVST 420 PTLVEVSR L G VGSKCCKH PEAKRMPCAE DYLSWLNQL CVLHEKTPVS DRVTKCCTES 480 LVNRRPCFSA LEVDETYVPK EFNAETFTFH ADICTLSEKE RQIK QTALV ELVKHKPKAT 540 KEQLKAVMDD FAAFVEKCCK ADDKETCEAE EGKKLVAASQ AALGLGGGGS ARNGDHCPLG 600 PGRCCRLHTV RASLEDLGWA DWVLSPREVQ VTMCIGACPS OFRAANMHAQ IKTSLHRLKP 660 DTVPAPCCVP ASYNPMVLIQ KTDTGVSLOT YDDLLAKDCH CI 702
HSA-GPPGS-hGDF15{197-308)
Open reading frame (SEQ ID NO:29):
atggccctccctgtcaccgccctgctgcttccgctggctcttctgctccacgcc 5
gctcggcccgatgctcataaatcagaagtggcgcacagattcaaggacctcgga 103 ga gaaaac111aaagcactggtgctgatcgcc11cgcacaatac11gcagcag 162 tgccc ttcgaagatcacg gaaactggtcaacgaagtgaccgag11cgctaag 216 acctg tgtcgctgacgagagcgcggaaaactgcgacaag tcccttcacacgctg 270
11cggcgataagctctgcacggtcgcgactctgagggaaacctacggagagatg 324 gcaga11gctgtgcaaagcaggaacctgagaggaacgaatg111cctgcaacat 378 aagga gacaacccaaatcttccgcgcctcgtgcgtccggagg tgga gtgatg 432 tgcacggccttccat ataatgaggaaac 1tcctgaaaaagtacctctacgaa 486 a cgcccgqagacacccgt t etaeg ccccggag cttctg Letteg caaag 540 cgctacaaggcggcttttactgagtgctgccaagctgccgacaaagccgcatgc 594 ctgctgccaaagctcgatgaactcagggacgagggaaaggcatcctccgc ag 648 cagcgcctgaaatgegcctcaetgcaaaag111ggagaacgcgcattcaaggcc 702 tgggcggtggcccggctcagccagagattccccaaggccgagtttgccgaggtg 756 tccaagctcgttactgatctgaccaaagtccac ccgaa tgctgtca ggagat 810 cttttggagtgcgccgacgacagagcggacctggccaagtacatctgcgaaaa c 864 cagga 1cgatc catctaagctcaaggagtgc gcgaaaaacccctgttggaa 918 aagtcgcactgtattgcggaagtggagaacgacgagatgcctgcagacttgccg 972 tcactggcggctgacttcg tggagtcqaagga cgtgtgca aaacta cgcgga a 1026 gcgaaggatgtctttctgggaatgttcctgta cgaatacgcacggcgccatccg 1080 gaeta ctcagttgtgctgttgctccgcc11gcta;agacttacgaaa ctaccttg 1134 gagaaatgctgegecgccgeegatcctcacgaatg1 acgeaaaagtg11cgac 1188 gagtttaagect ctcg tggaagaacctcagaat ctga tc g cagaactg gaa 1242 ctgttcgagcagctcggggaatacaagttccagaatgcgctgctcgtccggtat 1296 a ctaagaaagtgcca caagtgtccaccccgactctgqtcgaa gtgtcgcgcaat 1350 ctggggaaagtcggategaagtgctg caagcatccggagg cgaaacgaatgeeg 1 04 tgcg eggagga tacctg eggtgg tgctgaaccagctctgcgtgctgcatgaa 1458 aaga ccccggtg tccgaccgggtca ccaagtgt gcactgagtccctcgtgaa c 1512 eggeg cccttgcttctegg ccctcgaagtcgatgag cttacgtgccaaaagag 1566
111a atgccga aa;cc11ca cc.11ca cgctga ca;tctgca c .1ga gcgaaaa g 1620 gaaagacaga11aagaagcagacggccctggt ggaac tcgtcaaacataaaecc 1674 aaagctacgaaagag cagctgaaagcag tatgg cqatttcg ccgett egtg 1728 gaaaaatgctgcaaggccgacgataaggaaacttgt ttcgccgaggaggggaag 1782 aagctggtcgcagcaa;gccaagccgctctgggtcttggcccacegggca gcgcg 1836 aggaa tggcgaccactgccca11gggaccgggacggtg 1gcagactccacact 1890 gtccgggcttcactcgaggacctggg ttgggccgactggg tgetgtcgceccgg 1944 gaag tccagg caccatg tqcatcggagcgtg cccgagccaatttcg cgccgcg 1998 aaca tgcacgcccagatcaagacctcgctgca ccgcctgaagcctgacaccgtg 2052 ccagccccctgctgtgtgccggcctcctacaa cccaatggtgctca tccaaaag 2106 accgataccggcgtgagcctgcaaacttacgatgatc ttctggcc aggac tgt 2160 cactgcatc 2169
Expressed protein (SEQ ID NO:30):
DAHKSEVAHR FKDLGEENFK ALVLIAFAQY LQQCPFEDHV LV EVTEFA KTCVADESAE 60 NCDKSLHTLF GDKLCTVATL RETYGEMADC CAKQEPERNE CFLQH DDNP NLPRLVRPEV 120 DVMCTAFHDN EETFLKKYLY EIARRHPYFY APELLFFAKR YKAAFTECCQ AAD AACLLP 180 KLDELRDEG ASSAKORLKC ASLQKFGERA FKAWAVARLS QRFPKAEFAE VSKLVTDLTK 240 VHTECCHGDL LECADDRADL AKYICENQDS I 3SKLKECCE KPLLE SHCI AEVENDEMPA 300 DLPSLAA.DFV E3KDVCKNYA EAKDVF'LGMF LYEYARRHPD YSVVLLLRLA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPQNLIKQ NCELFEQLGE YKFQNALLVR YTKKVPQVST 420 PTLVEV3R L GKVGSKCCKH PEAKRMPCAE DYLSVVLNQL CVLHEKTPV5 DRVTKCCTES 480 LVNRRPCFSA LEVDETYVP EFNAETFTFH ADICTLSEKE RQIKKQTALV ELVKHKPKAT 540 KEQL AVMDD FAAFVE CCK ADDKETCFAE EGKKLVAASQ AALGLGPPGS AR GDHCPLG 600 PGRCCRLHTV RASLEDLGWA DWVLSPREVQ VTMCIG.ACPS QFRAANMHAQ IKTSLHRLKP 660 DTVPAPCCVP ASYNPMVLIQ KTDTGVSLQT YDDLLAKDCH CI 702
HSA-hGDF15(197-308)frso linker)
Open reading frame (SEQ ID NO:31):
a ggccctccctgtcaccgccc gctgctb,ccgctggctcttcbgctccacgcc 54 gcbcggcccgabgcbcabaaabcagaagbggcgcacagattcaaggacctcgga 108 gaagaaaa c111aaagcactgg gctga bcgccttcgcacaa acbbgcagcag 162 tgcccgttcgaagatcacgtgaaactggtcaacgaagbgaccgagb.b.cgcbaag 216 acctg gt cgctgacgagaqcgcggaaaacbgcgacaagbcccttcacacgctg 270 ttcgg cgataag c ctgcacggtcg cgactctgagggaaacctacggagagatg 324 gcaga b bgcbg bqcaaag caggaaccbgagaggaacgaabgbbbccbgcaacab 378 aagg a cgacaa cccaaatc 1ccgcg cctcgtgcgtccggaggtgg a cgtga g 432 tgca cggcc11ccatgataatgaggaaactttcctgaaaaagtacctctacgaa 486 a cgcccg aga acccgtatt ctacgccccggag c btctgtb,cttcgcaaag 540 eg cbacaaqgcggcbbbbacbgag bgcbg ccaagctgccgacaaagccg ca tgc 594 ctgctgccaaagctcgatgaactcagggacgagggaaaggca tcctccgcaaag 643 cagcgcctgaaatgcgcctcactgca a agtttggagaacgcgcattcaaggcc 702 bgggcggbggcccggctcagccagagab ccccaaggccgagtttgccgaggtg 756 tccaagctcg11actgatcbga caaagb ccacaccgaabgctgtca b,ggagat 810 cb ggagbg cgccgacg cagag cggacctggccaag acatctg cgaaaac 864 cagg a b bcgabcbcabcbaagcbca aggagbg cbgcgaa aaacccctg11gga a 918 aagtcgcacbgbabb.gcggaagbggagaacga cgagatgcctgcagacttgccg 972 tcactggcggctgacttcg ggagtcgaaggacgtgtgcaaaaactacgcggaa 1026 gcgaaggatgtct tt ctgggaatgt tcctgtacgaatacg cacggcg ccatccg 1080 g cta ctcagttgtgctgt gctcc ccttgctaagacttacgaaa cbaccttg 1134 gagaaatgctgcgccgccgccgatcctcacgaa gttacgcaaaagtgttcga c 1188 gagtttaagcctctcgtggaagaacctcagaa tctgatcaagcaga a ctgtga a 1242 cbgttcgagcagctcggggaabacaag11ccagaabgcgetgcbcgtccggtat 1296 actaagaaagtgccacaagtgtccaccccgact ctgg cgaag tgtcgcg caat 1350 c ggggaaagtcgga tcgaagtgctgcaagcatccggaggcgaaacgaa tqccg 1404 tgcgcggaggattacctgtcggtggtgctgaaccagctctgcgtgctgcatgaa 1 58 aagaccccggtg b,ccgacegggteaccaagbgb b,gcactgagtccctcgtgaac 1512 cggcgcccttgcbbcbcggcccbcgaagtcgatgagac bacgbgccaaaagag 1566
111a a gccga aacc11ca cc111ca cgctga ca tcbgca c111ga g cgaaaa g 1620 gaaa gacaga11aagaag cagacggccctggtggaactcg caaaca aaaccc 1674 aaagctacgaa agagcagctgaaagcagttatggacgatttcgccgc11tegtg 1 28 gaaaaatgcbgcaaggccgacga baaggaaac bgb b, bcgecgaggaggggaag 1782 aagctggtcgcagcaagccaagccgctctgggtcttgcgaggaatggcgaccac 1836 tgcccattgggaccgggacggtgttgcagactccacactgtccgggcttcactc 1890 gaggacctgggttgggccgactgggtgctgtcgccccgggaa gtccaggtcacc 1944 atgtg cab cggagcgbgcccgagecaatttegcgccgcgaacabgcacgeccag 1998 atcaagacctcg ctgcaccgcctgaagccbgacaccgbgccagccccctgctgt 2052 gtgccggcctcctacaacccaatgg tgct catccaaaagaccgataccggcgtg 2106 agcctgcaaac11acga ga tcttctggccaaggactgtc ctgca tc 2154
Expressed protein (SEQ ID NO:32):
DAH SEVAHR FKDLGEENFK ALVLIAFAQY LQQCPFEDHV KLV EVTEFA KTCVADESAE 60 NCDKSLHTLF GDKLCTVATL RETYGE ADC CA QEPERNE CFLQH DDNP NLPRLVRPEV 120 DVMCTAFHDN EETFLKKYLY EIARRHPYFY APELLFFAKR YKAAFTECCQ AADKAACLLP 180 KLDELRDEG ASSAKORLKC ASLQKFGERA FKAWAVARLS ORFPKAEFAE VSKLVTDLTK 240 VHTECCHGDL LECADDRADL AKYICENQDS I 3SKLKECCE KPLLE SHCI AEVENDEMPA 300 DLPSLAA.DFV E3KDVCKNYA EAKDVFLGMF LYEYARRHPD YSVVLLLRLA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPQNLIKQ NCELFEQLGE YKFQNALLVR YTKKVPQVST 420 PTLVEV3RNL GKVGSKCCKH PEAKRMPCAE DYLSWLNQL CVLHEKTPVS DP.VTKCCTES 480 LVNRRPCFSA LEVDETYVPK EFNAET TFH ADICTLSEKE RQIKKQTALV ELVKHKPKAT 540 KEQLKAVMDD FAAFVEKCCK ADDKETCFAE EGKKLVAASQ .AALGLARNGD HCPLGPGRCC 600 RLHTVRASLE DLGWADWVL3 PREVQVTMCI GACPSQFRAA NMHAQI KT3L HRLKPDTVPA 660 PCCVPASYNP MVLIQKTDTG VSLQTYDDLL AKDCHCI 697 SA_Domain1-3x4GS-hGDF15
Open reading frame (SEQ ID NO:33):
atggccctccctgtcaccgccctgctgcttccgctggctcttctgctccacgcc 54 gctcggcccgaagctcataagtcag aaatcgccc taga t caacga cctcgg 108 g acagcactttaaagga ctcgtgttga11gca11cagccagtacctccaaaa g 162 tgca gctacga cgagcatgcgaagctggtgca ggaagtca ccgacttcgccaa a 216 acttgcgtcgctgatgagtcgg cggcaaactgcgacaaatcgc ccacaccctg 270 tt tggcgataagctg tgtgcgatcccgaatcttcgagagaattacggagaactt 324 gcagactgctgcaccaagcaggaaccggaacgcaacgagtgcttcctccaacac 373 aaggatga caacccatctctgccccctttcgaacggccggaggcggaagccatg 432 tgcactagctttaaggagaatccaac acgttcatggggcattacctcca gag 486 gtcg ccaggcgg cat cca tacttctacgccccq gaactg c tgtacta tgccgag 540 cagta caacga a tcctg a cgcagtgctgtgccgaggctgataagg a tcatgc 594 ctga ccccaaa gctggacggagtga aagaaaa ggcgctcgtgtcgtccgtgaga 648 caacgcggtggaggaggctccggcggcgg ggctcgggagggggaggttcagca 702 cggaa ggcgaccactgccctttggggccggga gctg11gccggcttcacact 756 g tgegegeg tccctcgaggatt tgggatgggcagat tgggtg c tgageccgaga 810 gaggtccaggtcaccatgtgta teggtg cctgcccg gccag t tcaggg ctgee 864 aacatgca cgcgcagatcaaaa c11cgetgcatcgcctgaaa ccagaca ccg11 918 ccggcaccctg11gcgtgcctgectcctacaatcctatgg tgetga11ca aag 972 accgacaccggag tgtccc tgcaaac ttacgacgat ctg c tcgccaaggactg c 1026 c ctg atc 1035 Expressed protein (SEQ ID NQ:34):
EAHKSEIAHR YNDLGEOHFK GLVLIAFSOY LQKCSYDEHA KLVQEVTDFA KTCVADESAA 60
NCDKSLHTLF GDKLCAI PNL RENYGEL DC CTKQEPERNE CFLQHKDDNP SLPPFERPEA 120
EAMCTSFKEN PTTFMGHYLH EVARRHPYFY APELLYYAEQ YNEILTQCCA EADKESCLTP 180
KLDGVKEKAL VSSVRQRGGG GSGGGGSGGG GSARNGDHCP LGPGRCCRLH TVRASLEDLG 240
WADWVLSPRE VQVT CIGAC P3QFRAANMH AQIKTSLHRL KPDTVPAPCC VPA3YNPMVL 300
IQKTDTGV5L QTYDDLLAKD CHCI hFc-3x4GS~ GDF15f197-308)
Open reading frame (SEQ ID NO:35):
atggagacagacacg c tccttt tgtggg tactgctg c tttggg tccctggg beg 54
ac gggga taagacccacacgtgccctccctgtccagcacccgagttgctcggt 108
gggccatccgtgtttb bgtttcctccca agccc aagacacgtbgatga t agc 162
cgcactcccgaggtaacgtgcgtagtggtggatgtgtcacatgaggacccggag 216
gtgaagttcaatbggtacg b,ggacggagt cgaagtgcacaacgcaaagacgaaa 270
ccccgagaggaacagtacaactcgacctatcgcg agtgagcgtactgactgtg 324
11gca bcaggattggcttaacggaa aagagtacaagtgta agtatccaataa g 378
gccctccc gcgcct ttgaaa ga caatcagcaaagcgaaggggcagcctcgc 432
gaaccgeaagb atabaccctcccgcetag ccgggacgaattgac taagaa b,cag 486
g tcagcctcacatgtctggtcaaaggct t b tacccg teagata begegg begag 540
tgggagtccaatgggcagccggaaaaca a 11acaagacaacg ccgccag c 11g 594
gactcagacgggtcg ttttcctctactcgaaactgacggtggacaagtcccga 648
tggcagcaggga atgta11cagctg11cggtc tgcacg ggcgctcca caat 702
ca11a t,acacaaaagbcgcb,gtccctgt cgccgggaaagggaggtgg cgggtcc 756
ggcggaggagga tc ggtgg tggagg ttcagccagaaacggtgatca ttgecca 310
cttggacccgggaggtgctgtcggcttcacactgtcagggcatcactcgaagat 864
ctcgggtgggcggactgggtgctttcgcccagagaagtgcaagtca ctatgtgc 18
at,tggtgcgtgeceg b,cgcaab b,cagagcb,gceaaca bgeatg cccagatcaaa 972
acgagcttgcaccgg c tgaaacccgacacagtccccgctccg gctgcg tgccg 1026 gcgtcgta taaccccatggtcctcatccagaaaaccgatacgggagtgtcattg 1080 cagacatatgatgacct111ggccaaggattgcc ctgtatc 1122
Expressed protein (SEQ ID NO:36):
DKTH CPPCF AFELLGGFSV FLFFFKFKDT LMISRTFSVT CVVVDVSHSD FSVKFN YVD 60
GYEVHNAKTK PREEQYN3TY RVV3VLTVLH QDwLNGKEYK CKV3NKALPA PIEKTIS AK 120
GQPPEPQVY? LPPSPDELTK NQVSLTCLVK GFYPSDIAVE WESNGQPENN YKTTPPVLDS 180
DGSFFLYSKL TVDKSRSQQG NVFSCSVMHE ALHNHYTQKS LSLSFGKGGG GSGGGGSGGG 240
G3ARNGDHCP LGPGRCCRLH TVRASLEDLG wADwVLSPRE VQVTMCIGAC PSQFRAAN H 300
AOIKTSLHRL PDTVPAPCC VPAS YNFPP/L IQKTDTGVSL QTY'DDLLAKD CHCI 354
HSA-hGDF15(197-308),R198H
Open reading frame (SEQ ID NO:37):
atggaaaccgatac ctgctgctgtggg tgcttcttctttggg tgccggg tea 54
accggcga tgcccacaagtcggaggtggcccatcgg tttaaggacctcggqgag 103
gagaacttcaaagccctggtcctcatcgcc11cgcccaatacctccagcagtgt 162
cca11cgaa;gatcacgtgaagctcgtgaacgaagtgactgaatttgccaagact 216
tgtgtcgcagacgaaagcgccgaaaactgcgacaagtcg11gestaetctcttc 270
gggga taagctg tgcactg tcgcaacccttagaqagact acggtgaaatggc 324
gattgctgcgccaaacaagagccggagcgcaacgagtgcttcctccaacataag 378
gacgacaacccca;acctcccacgcctggtgcggcctgaggtcgacgtcatgtgc 432
accgctttccatgacaatgaggagact111ct caagaagtatctgtacgagate 486
gcccggagqcaccca tacttt a tgcaccqgagetecttttc tegctaaqegg 540
tacaaggcqgcgttcactgaa qctgtcaqgcagcaqacaaggcagca gcctc 594
ctgeegaaactggacgaac11cgcgacgagggt aagcgtcgtccgccaagcag 648
cgcc11aagtgcgcetcg11gcagaag111ggtgaacgcgcattcaaagcgtgg 702
geegtcgcaagactttcgc gcgg11cccaaaagcggag11tgccgaggtgtcc 756
aaactggtcaccgacctgaccaaggtccacaccgagtgctgccacggcgatctg 810
ctcgaatgcgccgacgacegggetga tctcgcaaagt ca 111gcgagaaccaa 864
gaetcgatctcgtcaaaa ctqaaggaa;tgctgcgagaagccgctgttggaaaag 918 agccattgtatcgccgaag tggagaacgatgaaatgcctgctgatctgccaagc 972
ctcgccgcagact tgtggagagcaaagacgtg tgcaagaactacg ccgaagcg 1026
aagga gtgttt tcggga tgttcctctacgagtacgcgcgcaggcaccctgac 1080
tactc g ggtcctgctg11gcggctggccaaa c11acgaaacca ccctcgaa 1134
aagtgctgcgcggctgccgatccacatga tgctacgcaaaggtgttcgatgaa 1188
1aagcctctggtggaggaaccacagaacctgatcaagcaaaattgtgaactg 1242
t tgaacagctgggagagtacaaatttcagaatgccctgctgg tcaga acact 1296
a gaaggtgccccaagtctccactccaaccctcgtggaggtgtcacggaa tctc 1350
ggcaa gtgggc gcaaatgctgtaagcacccggaagcaa gaggatgccctgc 1 04
gctgaagattacctgtccg ggtgctgaatcagctttgtg g tgcacgaaaag 1458
acgcctgtctccgaccgggtgaccaagtgctgtaccgaatcgctcgtgaatcgc 1512
agaccctgcttctccgctctcgaag tggacgaa c11acg tcccgaaggagttc 1566
aatg eggaaacc11cacc11ccacg eggaeatctgtaccctgagcga aaagag 1620
cggcagatcaagaaacagactgccctggtggaactggtgaagcacaagccgaag 1674
gcaacgaaggagcagctgaaggcggtgatggatgactttgeagccttcgtggaa 1728
aagtgttgcaaggcagatgataaagaaacctgtttcgcggaagaggggaagaag 1782
ttggtggctgccagccaggccgctctcggactgggaggtggaggatcaggaggc 1836
ggaggctccggaggaggaggctcggctcacaatggcgatcattgcccgctcgga 1890
c gggacgetgc gcagactgcataccgtccgcgcttcc1 ggaagatctggga 1944
tgggeggattgggtgttgtcaccaag gaggtgcaagtgacgatgtg atcggt 1998
gcgtgcccttcacagttccgcgctgcgaacatgcatgcccaaatcaagaccagc 2052
ctgcaccggctgaagccggacactgtcccagctccatgttgcgtgcccgcatcg 2106
t caacccgatggtgctcatcc gaaaactga cac ggagtc c ctgca acg 2160
tacga ga 1tgetegccaaagattgecactgcatt 2196
Expressed protein (SEQ ID NO:38):
AHK3EVAHR F DLGEENF ALVLIAFAQY LQQCPFEDHV LVNEVTEFA TCVADESAE 60 NCDKSLH LF GDKLCTVATL RETY'GSMADC CAKQSFSRNS CFLQHKDDN? NLFRLVRFEV 120 DVMCTAFHDN SETFLKKYLY EIARRHFYFY AFELLFFAKR YKAAFTECCQ AADKAACLLF 180 KLDELRDEGK A.SSA QRL C ASLQ FGERA F A AVARLS QRFP AEFAE S LVTDLT 240 VHTECCHGDL LECADDRADL AKYICENQDS ISS L ECCE KPLLEKSHCI AEVENDEMPA 300 DLPSLAADFV ESKDVCKNYA EAKDVFLGMF LYSYARRHPD YSWLLLRLA KTYETTLEKC 360 CAAADFHSCY AKYFDEFKFL YEEFQNLIKQ NCELFEQLGE YKFQNALLYR YTKKYFQYST 420 PTLVEV8PNL GKVGSKCCKH PEAKPMPCAE DYLSYV'LNQL CVLHEKTPVS DPVTKCCTES 480 LVKRRFCF A LEVDETYVFK EFMAETFTFH ADICTLSEKE RQIKKQTALV ELVKHKFKAT 540 EQLKAVMDD FAAFVEKCCK ADDKETCFAE EG LVAASQ AALGLGGGGS GGGGSGGGGS 600 AHNGDHCPLG PGRCCRLHTV RASLEDLG A D VLSPREVQ VTMCIGACPS QFRAANMHAQ 660 TKTSLMRLKF DTYFAFCCYF ASYNFMYLIQ KTDTGVSLQT YDDLLAKDCH CI 712
Η8Α-!ΊΘΟΡ15(197-308)^198Η,ΙΝί199Α
Open reading frame (SEQ ID NO:39):
aAqqa a a cqa ta ctctqctqctqtqqqtqcttcttctttqqqtqccqqqa tea 54
aceggcqatgcccacaagt cggaggtggcccat cgg111aaggacct cggggag 108
qaqaac11caaagccctggtcctcatcgcc11cgcccaatacctccagcagtgt 162
ccattegaagateaegtgaagetegtgaaegaagtgaetgaatttgeeaagaet 216
tqtgtcqcagacgaaagcgccgaaaactgcgacaagtcgttgcatactctcttc 270
gggga aagctgtgca ctgtcgca a ccctta ga ga ga ctta cggtga a a tggct 324
gattqctgcqccaaacaaqaqccqqaqcqcaacqaqtqcttcctccaacataaq 378
qacgacaaccccaacctcccacgcctggtgcggcctgaggtcgacgtcatgtgc 432
accqct ttcca tqa ca a t:qa qqa qa ct: t: t: t:ct:ca a qa a q t:a†:c†:q t:a cqa qa t:c 486
qcccggaqgca cccatac1111atgcaccggagct cc1111 c11 cgctaagcgg 5 0
tacaaggcggcgttcactgaatgctgtcaggcagcagacaaggcagcatgcctc 594
ct eeq aet qaeqaaetteqeqaeqaqqqtaaaqeqteqteeqeeaaqeaq 648
cqcc11 aagtgcqcctcg11gcagaag111ggtgaacgcgca11caaagcgtgg 702
c j '::j cc j■:a a q a.c c:jca c:jc:j q r_ tccca a a a q c:j:j a q zzzqccqa qqzqzee 756
aaactqgtcaccqacctqaccaaqqtccacaccqaqtqctqccacqqcqatctq 810
ctcgaatqcgccgacgaccgggctgatctcgcaaagtaca111gcgagaaccaa 864
ga.ct:cq a.tc*:cg*:ca a a a c*:qa a qqa a t:q c*:q cqa qa a q ccq c*:q *: *:qqa a a a q 918
aqcca11 qtat egccgaagtggagaacgatgaaatgcctgctgat ctgccaagc 972 ctcgccgcagactttgtggagagcaaagacgtgtgcaagaactacgccgaagcg 1026
aag'g acgxqx t tctcq q q a tqx tcctctacq aqxacq cq cq caq q caccctq ac 1080
tactca gtqq t cctqctq t tqcqqctqqcca a a a ct:t:a cqa a a cca ccctcqa a 1134
aaqtgctqcgcqgctgccgatccacatgaatgctacgcaaaggtg11cgatgaa 1188
ttta a qx c gqxqqa qqa a cca ca q a a ccxqa zca a qca a a a qxg a cxq 1242
tttgaacagct gggagagt acaaat 11 cagaat gccct get ggt cagat acact 1296
aaqaagqtgccccaagtctccactccaaccctcgtggaggtgtcacggaatctc 1350
ggca a a gtqqq ca q ca a a tq ctq ta a q ca cccqqa a q ca a a qa qqa tq ccctq c 1404
qctgaaqa11a cctgt ccgtggtgctgaat cagc111gtgtgctgcacgaaaag 1 58
acgcctgtctccgaccgggtgaccaagtgctgtaccgaatcgctcgtgaatcgc 1512
agaccctgc c ccgct ct cgaag ggacgaaac acgt cccgaaggag c 1566
aatgcggaaac c11cacc11ccacgcggacatctgtaccctgagcgaaaaagag 1620
ggea gatca a qa a a ca qa c gccc gqxgga a cxqqxqa a qca ca a gccga a q 1674
gcaacgaaggagcagctgaaggcggtgatggatgactttgcagcctt cgtggaa 28
aagtg11gcaaggcagatgataaagaaacctg111cgcggaagaggggaagaag 1782
ttgq tqgcXqcca qcca qqccqctctcqq ctqqqa qq tqqa qqa tea qqa qqc 1836
ggaggct ccggaggaggaggct cggct cacgccggcgat ca11gcccgct cgga 1890
ccgggacgctgctgcagactgcataccgtccgcgcttccttggaagatctggga 1944
tgggeggattgggtgttgteaeeaagagaggtgeaagtgaegatgtgtateggt 1998
qcqtgc cc11c acag11ccgcgctgcgaacatgcatgcccaaatcaagaccagc 2052
ctgea ccgq ctga a qccqq ca cxqxccca ge cc x gcqxgcccgc zcq 21 6
caacccgat ggt get cat ccagaaaact gacact ggagt ct cact gcaaacg 2 60
tacgacga111gctcgccaaaga11gccactgca11 2196
Expressed protein (SEQ ID NO:4Q):
DARKSEVAHR FKDLGSSNFK ALVLIAFAQY' LQQCRl'SDHV KL SVTSIA KTCVADESAE 60 CDKSLH L GDKLCTYATL RETYGEilA.DC CAKQEFERNE CFLQHKDDN? NLFRLYRFEY 120 DVMCTAFHDN EETFL YLY E ARRHPYFY APELLFFAKR YKAAFTECCQ AADKAACLL? 180 KLDELRDEGK ASSAKQRLKC ASLQKFGSRA FKA.viAVA.RLS QRFFKAEFAE VSKLVTDLTK 240 VHTECCHGDL LECADDRADL AKYICENQDS ISS L ECCE KPLLEKSHCI AEVENDEMPA 300 DLPSLAADFV ESKDVCKNYA EAKDVFLGMF LYSYARRHPD YSWLLLRLA KTYETTLEKC 360 CAAADFHSCY AKYFDEFKFL YEEFQNLIKQ NCELFEQLGE YKFQNALLYR Y KKYFQYS 420 PTLVEV8PNL GKVGSKCCKH PEAKPMPCAE DYLSYV'LNQL CVLHEKTPVS DPVTKCCTES 480 LVKRRFCF A LEVDETYVFK EFMAETFTFH ADICTLSEKE RQIKKQTALV ELVKHKFKAT 540 EQLKAVMDD FAAFVEKCCK ADDKETCFAE EG LVAASQ AALGLGGGGS GGGGSGGGGS 600 AHAGDHCPLG PGRCCRLHTV RASLEDLG A D VLSPREVQ VTMCIGACPS QFRAANMHAQ 660 TKTSLMRLKF DTYFAFCCYF ASYNFMYLIQ KTDTGVSLQT YDDLLAKDCH CI 712
HSA-hGDF15(197-308),N199£
Open reading frame (SEQ ID NO:41):
abggaaaccgabacbcbgcbgcbgbggg tgcttcttctttggg bgccgggabca 54
accggcga tgcccacaagtcggaggtggcccatcgg ttaaggacctcggggag 108
gagaacttcaa gccctggtccbcatcgcc bbcgcccaat ccbccagcag bgt 162
cca11cgaagatcacgbgaagcbcgtga acgaagtgacbgaa tttgcca agacb. 216
bgbgbcgcagacgaaagcg ccgaaaactgcgacaagtcgtb,gestaeb,ctcttc 270
gggga taagctg bgcac g tcgcaacccttagagagacttacggtgaaatggct 324
gattgctgcgccaaacaagagccggagcgcaacgagtgcttcctccaacataag 378
gacga caaccccaaccbcccacgcctggtgcggcctgaggtcg cgtcatgtgc 432
accgctttccabgacaab gaggagact11b,cb caagaagbabcb,gb acgagabe 486
gcccggagqcaccca bae b ba bgcaccqgagcbccb b bcb begebaaqegg 540
tacaaggcggcgttcactgaatgctgtcaggcagcagacaaggcagcatgcctc 594
ctgccgaaactggacgaacttcgcgacgagggtaaagcgtcgtccgccaagcag 648
cgccb.baagtgcgcctcgttgcagaagtttggtgaa cgcgca ttcaaagcgtgg 702
geegtcgcaagactttcgcagcggbbcccaaaagcggagb b,tgccgaggtgtcc 756
aaactggtcaccgacctgaccaaggtccacaccgagtgctgccacggcgatctg 310
c cgaatgcgccgacgacegggetg bc cgcaaagt c bb gcgagaacca a 864
gaetcgabcbcgbcaaaa cbgaaggaabgcbgcgagaagccgctgttgg aaag 18
agccabbgb,ategecgaagtggagaacga b,gaaabg cctgctga bc gccaagc 972
cbcgeegc gactttgtggagagcaaagacgb gbgcaagaacbacgeegaagcg 1026 aaggacgtg111ctcggga gttcctctacgag acgcgcgcaggcaccctgac 1080
tactcagtggtcctgctg ttgcggctggccaaaacttacgaaaccaccctcgaa 1134
aagtg ctgcgcggctgccgatccaca gaatg c acgca aaggtg11;cgatga a 1188
bbbaagccbcbggtggaggaaccacagaacctga bcaagcaaaabbg ga ctg 1242
111gaacagctgggagagta;caaab. 1cagaa tgccctgctggtca ga;tacact 1296
aagaaggtgccccaagtctccactccaaccctcgtggaggtg tcacggaa ct c 1350
ggcaaagtgggcagcaaatgctg aagcacccggaagcaaagaggatgccctgc 1404
gctgaaga tacctg ccgtgg tgctgaa cagctttgtgtgctgcacgaaaag 1 53
a cgcctgtctccgaccgggtgaccaagtgctgtaccgaatcgctcgtga atcgc 1512
agaccctgcttc ccgctc cg agtggacgaaacttacg cccgaaggagttc 1566
a tg cqgaa ccb tcacct bcc cg cggacatctgtaccctgagcgaaaaagag 1620
cggcagatcaagaaacag a ctgccctggtgga a ctggtga gcaca agccgaa g 1674
gcaacgaaggagcagctgaaggcggtgatgga tgactttgcagcc tcgtggaa 1728
aagtg11gcaa ggcagatgataaagaaaccbgbbbcgcggaag ggggaagaag 1782
tbggbggcb,gccagccaggccg c bcbeggacb gggaggb ggaggab caggaggc 1836
ggaggctccggaggaggaggctcggctcg egagggega bcabbqcccgcbcgga 1890
ccgggacgctgctgcagactgcataccgtccgcgcttccttggaagatctggga 1944
tgggcggattgggtg11gtcaccaagagaggtgcaagbgacgatgtgtatcggt 1998
gcg g cccttcacagttcc cgetgc aa abg catgcccaaatcaagaccagc 2052
cbgcaccggctgaagccggaca bgbcccagctccabg bgcgbgcccgcatcg 2106
tacaacccgatgg getea bcc gaa acbgac cbggag tctcactgcaaacg 2160
tacga egatttgebcgccaaagattgccactgc bb 2196
Expressed protein (SEQ ID NO:42):
DAHKSEVAHR FKDLGEEN K ALYLIAF.QY LQQCFFEDHY KLYNEYTEFA KTCYADESAE 60 NCD SLHTLF GD LCTVATL ETYGEMADC CA QEPERNE CFLQH DDN? NLPRLVRPEv 120 DVMCTAFHDN EETFLKKYLY EIARRHFYFY AFELLFFAKR YKAAFTECCQ AADKAACLLF 180 KLDELRDEGK A33AKQRLKC A3LQKFGERA FKAvv YARL3 Q FPKAEFAE Y3KLYTDLTK 240 VH SCCHGDL LSCADDRADL AKY CSNQDS ISSKLKECCE KFLLEKSHCI AEVENDEMFA 300 DJ.iPSLAADFV ESKDVCKNYA EAKDVFLGMF LYEYARRHFD YSSWLLLRIA KTYETTLEKC 360 CAAADPHECY AKVFDEFKPL VEEPQNLI Q NCELFEQLGE YKFQNALLVR YTKKVPQVST 420 PTLVSVSRNL G VGSKCCKH PSAKRMPGAS DYLSVVLNQL CVLHEKTFVS DRVTKCCTSS 480 LV RRFCFSA LEYDETYYPK EFNAE F FH ADICTLSEKE RQIKKQTALY ELYKHKPKAT 540 KSQLKAVMDD FAAFVEKCCK ADDKETCFAE EGKKLVAASQ AALGLGGGGS GGGGSGGGGS 600 AREGDHCPLG PGRCCRLHTV RA LEDLGSA DSVLSFREVQ VTMCIGACFS QFRAANMHAQ 660 IKTSLHRLKP DTVPAPCCVP ASYNP VLIQ KTDTGVSLQT YDDLLAKDCH CI '712
Mature human GDF15 (197-308) iSEQ ID NO:44)
ARNG DHCPLGPGRC CRLHTVRASL EDLGWADWVL SPREVQVTMC IGACPSQFRA ANMHAQIKTS LHRLKPDTVP APCCVPASYN PMVLIQKTDT GVSLQTYDDL LAKDCHCI
Mature human SA (25-609) (SEQ ID NO: 45}
DAHKSE VAHRFKDLGE ENFKALVLIA FAQYLQQCPF
EDHVKLVNEV TEFAKTCVAD ESAENCDKSL HTLFGDKLCT VATLRETYGE MADCCA QEP ERNECFLQHK DDNPNLPRLV RPEVDVMCTA FHDNEETFLK KYLYEIARRH PYFYAPELLF FAKRYKAAFT ECCQAAD AA CLLPKLDELR DEGKASSAKQ RLKCASLQKF GERAF AWAV ARLSQRFPKA EFAEVSKLVT DLTKVHTECC HGDLLECADD RADLA YICE NQDSISS LK ECCEKPLLEK SHCIAEVEND EMPADLPSLA ADFVESKDVC KNYAEAKDVF LGMFLYEYAR RHPDYSWLL LRKAKTYETT LEKCCAAADP HECYAKVFDE FKPLVEEPQN LIKQNCELFE QLGEYKFQNA LLVRYTKKVP QVSTPTLVEV SRNLGKVGSK CCKHPEAKRM PCAEDYLSW LNQLCVLHEK TPVSDRVTKC CTESLVNRRP CFSALEVDET YVPKEFNAET FTFHADICTL SEKERQIKKQ TALVELV HK P ATKEQL A VMDDFAAFVE KCCKADDKET CFAEEGKKLV AASQAALGL
MSA- (4GS) 3-GDF15 (197-308) (Q247R)
DMA (SEQ ID NO: 65 )
Atggagactgataccctgctcctctgggtgctgcttctctgggtccctggctcaaccggcga agcccacaagtccgagatcgcccatcgctataatgctcttggagaacagcatttcaagggac tggtgctgattgccttctcccagtacctccaaaaggccagctatgatgagcacgccaagctc gtccaagaagtcaccgactttgctaagacttgtgtggccgacgaaagcgctgccaattgcga taagtcactccatactctcttcggggacaagctgtgcgctattcccaacctccgcgagaatt acggtgagctggccgactgttgcaccaaacaggagccagagcggaacgagtgcttccttcaa cacaaagatgacaatccttcactgcctcctttcgaacggcccgaggcagaggcaatgtgcac tagcttcaaggagaacccaaccaccttcatgggacactacctccatgaggtcgctagacggc atccctacttctatgccccagagcttctgtattatgcagaacagtacaatgagat cctgacc cagtgctgtgctgaggctgataaggagagctgcctgaccccaaagctcgacggagtgaagga aaaggctcttgtgtccagcgtgcggcagcgcatgaagtgct cttcaatgcagaagtttgggg agcgcgccttcaaagcctgggccgtggccagactgtcccagacctttcctaatgctgacttt gccgagatcaccaagctcgctactgacctgaccaaggtcaacaaagagtgttgccacggaga tctgctcgaatgcgccgacgaccgcgctgagcttgctaagtacatgtgcgaaaaccaggcaa ccatttctagcaagctgcagacctgttgtgataagcctctgctgaagaaagcccattgcctc agegaggtcgaacatgacactatgeeggcagacctccccgctatcgccgctgac11cgt.gga ggaccaagaagtgtgcaagaattacgccgaggctaaggacgtgttccttggtactttcctct acgagtatagceggaggeaccctgactacagcgtgtctcttctgc11cggctcgccaagaag tacgaagccaccctcgaaaaatgctgcgccgaagcaaatccgccagcttgttacgggactgt getggctgagtt cageccctggtggaagagcccaagaacctcgtcaagaccaactgcgacc tttacgagaaactgggtgaatacggg111cagaatgeea11ctggtgeggtacacccagaag gcaccacaagtgtccaccccaacccttgtcgaggcagcccgcaaccttggacgcgtcgggac caagtgttgtaccctgcccgaggaccaacgcctgccctgcgtcgaggactaccttagcgcca ttctgaacagagtctgtctgctccatgaaaagacccctgtgtctgagcacgtgaccaagtgc tgttcaggctcactggtggagaggaggccttgcttttctgccctgaccgtggacgaaaccta cgtgcccaaggagttcaaagctgaaaccttcactttccattcagacatctgtaccctccccg aaaaggaaaagcaaatcaagaagcagaccgcccttgctgaactggtgaagcacaagccaaag gccaccgccgaacaactcaagactgtgatggacgacttcgctcagttcctcgacacttgctg caaagccgccgacaaagatacctgtttctcaaccgaggggccgaacctggtgactagagcca aggacgccctggccggaggaggtggtt ctggcggtggtggttccggcggaggaggatctgcc aggaatggagatcactgcccactcggaccgggacggtgttgtcgcctgcacactgtgcgcgc atctcttgaggatctgggatgggctgattgggtgctctctcccagagaggtgcaagtcaeca tgtgcattggcgcctgcccctccaggttcagggcagctaacatgcatgctcagatcaagact agcctgcacaggctgaagcccgacactgtccctgccccatgttgtgtgccggcct cctataa cccaatggtcctgatccaaaagaccgataccggagtgtcacttcagacttacgacgatctgc 11gcaaaagactgccattgeatctga
Protein (SEQ ID NO: 66)
eahkseiahrynalgeqhfkglvliafsqylqkasydehaklvqevtdfaktcvadesaanc dks 1h1.1fqd k1caipn1renyqe1adcctkqepernecf1qhkddnps1ppferpeaeamc tsfkenpttfmghylhevarrhpyfyapellyyaeqyneiltqccaeadkescltpkldgvk eka1vssvrqrmkcssmqkfqerafkawavar1sqtfpnadfaeitk1atd11kvnkecchq d11ecaddrae1akymcenqatissk1qtccdkp11kkahc1se ehdtmpadlpaiaadfv edqevcknyaeakdvf1gtf1yeysrrhpdysvs111r1akkyea11ekccaeanppacygt vlaefqp1veepkn1vktncd1yeklgeygfqnai1vrytqkapqvstp11veaarn1grvg tkcctlpedqrlpcvedylsailnrvcllhektpvsehvtkccsgslverrpcfsaltvdet yvpkefkaetftfhsdic11pe kekqikkqta1ae1vkhkpkataeq1ktvmddfaqf1dtc ckaadkdtcfstegprilvtrakdalaggggsggggsggggsarrigdhcplgpgrccrlhtvr asledlgwadwvlspre qvtmcigacpsrfraanmhaqiktslhrlkpdt papecvpasy npmvliqktdtgvslqtyddllakdchci
MSA- (4GS) 3-GDF15 (197-308) (S278R) DNA (SEQ ID NO: 67 )
atggagactgataccctgctcctctgggtgctgcttctctgggtccctggctcaaccggcga agcccacaagtccgagatcgcccatcgctataatgctcttggagaacagcatttcaagggac tggtgctgattgccttctcccagtacctccaaaaggccagctatgatgagcacgccaagctc gtccaagaagtcaccgactttgctaagacttgtgtggccgacgaaagcgctgccaa11gcga taagt.cactccatactctcttcggggacaagct.gtgcgctattcccaacctccgcgagaatt acggtgagctggccgactgttgcaccaaacaggagccagagcggaacgagtgcttccttcaa cacaaagatgacaatccttcactgcctcctttcgaacggcccgaggcagaggcaatgtgcac tagcttcaaggagaacccaaccaccttcatgggacactacctccatgaggtcgctagacggc atccctacttctatgccccagagcttctgtattatgcagaacagtacaatgagatcctgacc cagtgctgtgctgaggctgataaggagagctgcctgaccccaaagctcgacggagtgaagga aaaggctcttgtgtccagcgtgcggcagcgcatgaagtgctcttcaatgcagaagtttgggg agcgcgccttcaaagcctgggccgtggccagactgtcccagacctttcctaatgctgacttt gccgagatcaccaagctcgctactgacctgaccaaggtcaacaaagagtgttgccacggaga tctgctcgaatgcgccgacgaccgcgctgagcttgctaagtacatgtgcgaaaaccaggcaa ccatttctagcaagctgcagacctgttgtgataagcctctgctgaagaaagcccattgcctc agcgaggtcgaacatgacactatgccggcagacctccccgctatcgccgctgacttcgtgga ggaccaagaagtgtgcaagaattacgccgaggctaaggacgtgttccttggtactttcctct acgagtatagccggaggcaccctgactacagcgtgtctcttctgcttcggctcgccaagaag tacgaagccaccctcgaaaaatgctgcgccgaagcaaatccgccagcttgttacgggactgt gctggctgagtttcagcccctggtggaagagcccaagaacctcgtcaagaccaactgcgacc tttacgagaaactgggtgaatacgggtttcagaatgccatt ctggtgcggtacacccagaag gcaccacaagtgtccaccccaacccttgtcgaggcagcccgcaaccttggacgcgtcgggac caagtgttgtaccctgcccgaggaccaacgcctgccctgcgtcgaggactaccttagcgcca 11ctgaacagagtctgtctgctccat.gaaaagacccctgtgtctgagcacgtgaccaagtgc tgttcaggctcactggtggagaggaggcc11gc1111ct.gccctgaccgtggacgaaaccta cgtgcccaaggagttcaaagctgaaaccttcactttccattcagacatctgtaccctccccg aaaaggaaaagcaaatcaagaagcagaccgcccttgctgaactggtgaagcacaagccaaag gccaccgccgaacaactcaagactgtgatggacgacttcgctcagttcctcgacacttgctg caaagccgccgacaaagatacctgtttctcaaccgaggggccgaacctggtgactagagcca aggacgccctggccggaggaggtggttctggcggtggtggttccggcggaggaggatctgcc aggaatggagatcactgcccactcggaccgggacggtgttgtcgcctgcacactgtgcgcgc atctcttgaggatctgggatgggctgattgggtgctctctcccagagaggtgcaagtcaeca tgtgcattggcgcctgcccctcccaattcagggcagctaacatgcatgctcagatcaagact agcctgcacaggctgaagcccgacactgtccctgccccatgttgtgtgccggccaggtataa cccaatggtcctgatccaaaagaccgataccggagtgtcacttcagacttacgacgatctgc ttgcaaaagactgecattgcatctga
Protein (SEQ ID NO: 68)
eahkseiahrynalgeqhfkglvliafsqylqkasydehaklvqevtdfaktcvadesaanc dks 1h1.1fgd k1caipn1renyge1adcctkqepernecf1qhkddnps1ppferpeaeamc tsfkenp11fnghy1hevarrhpyfyape11yyaeqyne i11qccaeadkesc11pk1dgvk eka1vssvrqrmkcssmqkfgerafkawavar1sqtfpnadfaeit.k1atd11.kvnkecchg dllecaddraelakymcenqatissklqtccdkpllkkahclsevehdtmpadlpaiaadfv edqevcknyaeakdvf1gtf1yeysrrhpdysvs111rIakkyea11ekccaeanppacyqt vlaefqp1 eepkn1vktncd1yeklgeygfqnai1vrytqkapqvstp11veaarn1grvg tkect Ipedqrlpcvedylsailnrvcllhektpvsehvtkccsqslverrpcfsaltvdet yvpkefkaetftfhsdictIpekekqikkqtalaelvkhkpkataeqlktvmddfaqfldtc ckaadkdtcfstegprilvtrakdalaggggsggggsggggsarrigdhcplgpgrccrlhtvr asledlgwadwvlsprevqvtmcigacpsqfraanmhaqiktslhrlkpdt7papccvpary npm l iqktdtgvs1qtydd11akdchci
MSA- C4GS) 3-GDF15 (197-308) (D289R)
DNA (SEQ ID NO: 69)
Atggagactgataccctgctcctctgggtgctgcttctctgggtccctggctcaaccggcga agcccacaagtccgagatcgcccatcgctataatgctcttggagaacagcatttcaagggac tggtgctgattgccttctcccagtacctccaaaaggccagctatgatgagcacgccaagctc gtccaagaagtcaccgactttgctaagacttgtgtggccgacgaaagcgctgccaa11gcga taagt.cactccatactctcttcggggacaagct.gtgcgctattcccaacctccgcgagaa1.1 acggtgagctggccgactgttgcaccaaacaggagccagagcggaacgagtgcttccttcaa cacaaagatgacaatcc11cactgcctcctttcgaacggcccgaggcagaggcaatgtgcac tagc11caaggagaacccaaccaccttcatgggacactacctccat.gaggtcgctagacggc atccctacttctatgccccagagcttctgtattatgcagaacagtacaatgagatcctgacc cagtgctgtgctgaggctgataaggagagctgcctgaccccaaagctcgacggagtgaagga aaaggctcttgtgtccagcgtgcggcagcgcatgaagtgctcttcaatgcagaagtttgggg agcgcgccttcaaagcctgggccgtggccagactgtcccagacctttcctaatgctgacttt gccgagatcaccaagctcgctactgacctgaccaaggtcaacaaagagtgttgccacggaga tctgctcgaatgcgccgacgaccgcgctgagcttgctaagtacatgtgcgaaaaccaggcaa ccatttctagcaagctgcagacctgttgtgataagcctctgctgaagaaagcccattgcctc agcgaggtcgaacatgacactatgccggcagacctccccgctatcgccgctgacttcgtgga ggaccaagaagtgtgcaagaattacgccgaggctaaggacgtgttccttggtactttcctct acgagtatagccggaggcaccctgactacagcgtgtctcttctgcttcggctcgccaagaag tacgaagccaccctcgaaaaatgctgcgccgaagcaaatccgccagcttgttacgggactgt gctggctgagtttcagcccctggtggaagagcccaagaacctcgtcaagaccaactgcgacc tttacgagaaactgggtgaatacgggtttcagaatgccatt ctggtgcggtacacccagaag gcaccacaagtgtccaccccaacccttgtcgaggcagcccgcaaccttggacgcgtcgggac caagtgttgtaccctgcccgaggaccaacgcctgccctgcgtcgaggactaccttagcgcca 11ctgaacagagtctgtctgctccat.gaaaagacccctgtgtctgagcacgtgaccaagtgc tgttcaggctcactggtggagaggaggcc11gc1111ct.gccctgaccgtggacgaaaccta cgtgcccaaggagttcaaagctgaaaccttcactttccattcagacatctgtaccctccccg aaaaggaaaagcaaatcaagaagcagaccgcccttgctgaactggtgaagcacaagccaaag gccaccgccgaacaactcaagactgtgatggacgacttcgctcagttcctcgacacttgctg caaagccgccgacaaagatacctgtttctcaaccgaggggccgaacctggtgactagagcca aggacgccctggccggaggaggtggttctggcggtggtggttccggcggaggaggatctgcc aggaatggagatcactgcccactcggaccgggacggtgttgtcgcctgcacactgtgcgcgc atctcttgaggatctgggatgggctgattgggtgctctctcccagagaggtgcaagtcaeca tgtgcattggcgcctgcccctcccaattcagggcagctaacatgcatgctcagatcaagact agcctgcacaggctgaagcccgacactgtccctgccccatgttgtgtgccggcct cctataa cccaatggtcctgatccaaaagaccaggaccggagtgtcacttcagacttacgacgatctgc ttgcaaaagactgccattgcatctga
Protein (SEQ ID NO: 70)
Eahkseiahryna1geqhfkg1v1iafsqy1qkasydehak1vqevtdfaktcvadesaanc dkslhtlfgdklcaipnlrenygeladcctkqepernecflqhkddnpslppferpeaeamc tsfkenp11fmghy1he arrhpyfyape11yyaeqyne i11qccaeadkesc11pk1dg k eka1vssvrqrmkcssmqkfgerafkawavar1sqtfpnadfaeit.k1atd11.kvnkecchg d11ecacidraeIakymcenqatissk1qtccdkp11kkahc1sevehdtmpad1paiaadfv edqevcknyaeakdvf1qtf1yeysrrhpdysvs111r1akkyea11ekccaeanppacyqt vlaefqp1veepkn1vktncd1yeklgeygfqnai1vrytqkapqvstp11veaarn1grvq tkcct Ipedqrlpcvedylsailnrvcllhektpvsehvtkccsgslverrpcfsaltvdet yvpkefkaetftfhsdic11pe kekqikkqta1ae1vkhkpkataeq1ktvmddfaqf1dtc ckaadkdtcfstegpnlvtrakdalaggggsggggsggggsarngdhcplgpgrccrlhtvr asledlgwadwvlspre qvtmcigacpsqfraanmhaqiktslhrlkpdtvpapecvpasy npmvliqktrtg s1qtydd11akdchci
MSA- (4GS) 3-GDF15 (197-308) (L294R)
DNA (SEO ID NO: 71)
atggagactgataccctgct cctctgggtgctgcttctctgggtccctggctcaaccggcga agcccacaagtccgagatcgcccatcgctataatgctcttggagaacagcatttcaagggac tggtgctgattgccttctcccagtacctccaaaaggccagctatgatgagcacgccaagctc gtccaagaagtcaccgactttgctaagac11.gtgtggccgacgaaagcgctgccaa1tgcga taagtcactccatactctcttcggggacaagctgtgcgctattcccaacctccgcgagaatt acggtgagctggccgactgttgcacc^aacaggagccagagcggaacgagtgcttccttcaa cacaaagatgacaatcct.tcactgcctcctttcgaacggcccgaggcagaggcaatgt.gcac tagcttcaaggagaacccaaccaccttcatgggacactacctccatgaggtcgctagacggc atccctacttctatgeeccagagcttctgta1.1atgcagaacagtacaatgagatcct.gacc cagtgctgtgctgaggctgataaggagaget.gcctgaccccaaagct.cgacggagtgaagga aaaggctc11gtgtccagcgtgcggcagegcatgaagtgctcttcaatgeagaagt11gggg agcgcgccttcaaagcctgggccgtggccagactgtcccagacctttcctaatgctgacttt gecgagatcaccaagctcgctactgacctgaccaaggtcaacaaagagtgttgccacggaga tctgetcgaatgcgccgacgaccgcgctgagcttgetaagtacatgtgcgaaaaccaggcaa ccatttctagcaagctgcagacctgttgtgataagcctctgctgaagaaagcccattgcctc agcgaggtcgaacatgacactatgccggcagacctccccgctatcgccgctgacttcgtgga ggaccaagaagtgtgcaagaattacgccgaggctaaggacgtgttccttggtactttcctct acgagtatagccggaggcaccctgactacagcgtgtctcttctgcttcggctcgccaagaag tacgaagccaccctcgaaaaatgctgcgccgaagcaaatccgccagcttgttacgggactgt gctggctgagtttcagcccctggtggaagagcccaagaacctcgtcaagaccaactgcgacc tttacgagaaactgggtgaatacgggtttcagaatgccattctggtgcggtacacccagaag gcaccacaagtgtccaccccaacccttgtcgaggcagcccgcaaccttggacgcgtcgggac caagtgttgtaccctgcccgaggaccaacgcctgc.eetgcgtcgaggactaccttagcgcca ttctgaacagagtctgtctgctccatgaaaagacccctgtgtctgagcacgtgaccaagtgc tgttcaggctcactggtggagaggaggccttgcttttctgccctgaccgtggacgaaaccta cgtgcccaaggagttcaaagctgaaaccttcactttccatt cagacat ctgtaccctccccg aaaaggaaaagcaaatcaagaagcagaccgcccttgctgaactggtgaagcacaagccaaag gccaccgccgaacaactcaagactgtgatggacgacttcgctcag11cctcgaca.c11.gctg caaagccgeegaca.aagatacctgtttctcaaccgaggggccgaacctggtgactagagcca a.ggacgccctggccggagga.ggtgg11ctggcggtggtggttccggcggagga.ggatctgcc aggaatggagat.ca.ctgeecactcggaeegggacggtgttgtcgcctgcacactgtgcgcgc a.tct.cttgaggat.ctgggatgggctga11gggtgctctctcccaga.ga.ggt.gcaagtcacca. tgtgcattggcgcctgcccctcccaattcagggcagctaacatgcatgctcagatcaagact agcctgcacaggctgaagcccgacactgtccctgccccatgttgtgtgccggcctcctataa cccaatggtcctgatccaaaagaccgataccggagtgtcaaggcagacttacgacgatctgc ttgcaaaagactgccattgcatctga
Protein ( SEQ ID NO: 72) Eahkseiahrynalgeqhfkglvliafsqylqkasydehaklvqevtdfaktevadesaanc dkslhtlfgdklcaipnlrenygeladcctkqepernecflqhkddnpslppferpeaeamc tsfkenpttfmghylhevarrhpyfyapellyyaeqyneiltqccaeadkescltpkldgvk eka1vssvrqrmkcssmqkfgerafkawavar1sqtfpnadfaeitk1atd11kvnkecchg dllecaddraelakymcenqatissklqtccdkpllkkahclsevehdtmpadlpaiaadfv edqevcknyaeakdvflgtflyeysrrhpdysvslllrlakkyeatlekccaeanppacygt v1aefqp1veepkn1vktncd1yek1geygfqnai1vrytqkapqvstp11veaarn1grvg tkcctlpedqrlpcvedylsailnrvcllhektpvsehvtkccsgslverrpcfsaltvdet yvpkefkaetftfhsdic11pe kekqikkqta1ae1vkhkpkataeq1ktvmddfaqf1dtc ckaadkdtcfstegpn1 trakdalaggggsggggsggggsarngdhcp1gpgrccrlhtvr asledlgwadw lspre qvtmcigacpsqfraanmhaqiktslhrlkpdtvpapccvpasy npmvliqktdtgvsrqtyddllakdchci

Claims

CLAIMS The invention claimed is:
1. A fusion polypeptide comprising a) first moiety and b) second moiety, wherein the first moiety is human serum albumin or a functional variant thereof; the second moiety is human GDFI5 protein or a functional variant thereof; and the first moiety is amino terminal to the second moiety.
2. The fusion polypeptide of claim 1, further comprising a linker that links the first moiety to the second moiety,
3. The fusion polypeptide of claim 1, wherein the first moiety has at least 80% sequence identity to SEQ ID NO: 45
4. The fusion polypeptide of claim 1, wherein the first moiety is human serum albumin.
5. The fusion polypeptide of any one of claims 1-4, wherein the second moiety has at least 80% sequence identity to SEQ ID NO:44.
6. The fusion polypeptide of any one of the preceding claims wherein the second moiety is mature human GDF15 peptide.
7. The fusion polypeptide of any preceding claim wherein: the first moiety is selected from the group consisting of HSA (25-609) (SEQ ID NO:45), and HSA(25-609) in which Cys34 is replaced with Ser and Asn503 is replaced with Gin; and the second moiety is selected from the group consisting human mature GDF15 peptide (197-308) (SEQ ID NO:44), human GDF15(211-308) (amino acids 211-308 of SEQ ID NO: 1), human GDF15(197-308) (SEQ ID NO:44) in which Cys203 is replaced with Ser (C203S) and Cys210 is replaced with Ser (C210S), human GDF15(197-308) (SEQ ID NO:44) in which Cys273 is replaced with Ser (C273S).
8. The fusion polypeptide of any preceding claim, wherein a) the ammo acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg; b) the ammo acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 199 of SEQ ID NO: 1 is not Asn; or c) the ammo acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 198 of SEQ ID NO: 1 is not Arg and the amino acid residue in the GDF15 protein or a functional variant thereof that corresponds to position 199 of SEQ ID NO: 1 is not Asn.
9. The fusion polypeptide of claim 8, wherein amino acid position 198 is His and amino acid position 199 is Ala.
10. The fusion polypeptide of any one of claims 1-6, wherein the GDF15 protein or a functional variant thereof further comprises an amino acid replacement or deletion of one or more surface exposed residues, one or more N -terminal amino acids (ammo acids 197-210), Cys 203, Cys 210 and/or Cys273.
11. The fusion polypeptide of claim 10, wherein one or more of the surface exposed residues are selected from a group consisting of Arg217, Ser219, Ala226, Glu234, Ala243, Ser246, Gln247, Arg263, Lys265, Thr268, A3a277, Asn280, Lys287, Thr290, Lys303 and Asp3G4.
12. The fusion polypeptide of any one of claims 2-11, wherein the linker comprises the amino acid sequence selected from the group consisting of (GGGGSer)n and (GPPGS)n, wherein n is one to about 20.
13. The fusion polypeptide of claim. 12, wherein the linker is (GGGGS)n, and n is 3.
14. The fusion polypeptide of claim 1 , wherein the fusion polypeptide has an amino acid sequence selected from the group consisting of SEQ ID NOS:20, 26, 28, 30, 32, 38, 40 and 42.
15. The fusion polypeptide of claim. 1, wherein the fusion polypeptide is a homodimer or monomer.
16. A pharmaceutical composition comprising the fusion polypeptide of any of the preceding claims and a pharmaceutically or physiologically acceptable carrier.
17. The pharmaceutical compostion of claim 6, wherein the composition is for subcutaneous administration.
18. A method for decreasing appetite and/or body weight in a subject, comprising administering to a subject in need thereof an effecti ve amount of fusion polypeptide of any of claims 1 -15 or a pharmaceutical composition of claim 16 or 17.
19. A method of treating a metabolic disorder in a subject, comprising administering to a subject in need thereof a therapeutically effective amount of fusion polypeptide of any of claims 1 -15 or a pharmaceutical composition of claim 16 or 17.
20. The method according to claim 18 or 19, wherem the subject is overweight or obese.
21. An isolated nucleic acid molecule encoding the fusion polypeptide of any one of claims 1-15.
22. A host cell comprising a recombinant nucleic acid that encodes the fusion polypeptide of any one of claims 1-15.
23. A method for making an a fusion polypeptide of any one of claims 1-14, comprising maintaining a host cell of claim 22 under conditions sui table for expression of said recombinant nucleic acid, whereby the recombinant nucleic acid is expressed and the fusion polypeptide is produced.
24. The method of claim 23 further comprising isolating the fusion polypeptide.
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