WO2014136099A1 - Process for ixabepilone, and intermediates thereof - Google Patents

Process for ixabepilone, and intermediates thereof Download PDF

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WO2014136099A1
WO2014136099A1 PCT/IB2014/059543 IB2014059543W WO2014136099A1 WO 2014136099 A1 WO2014136099 A1 WO 2014136099A1 IB 2014059543 W IB2014059543 W IB 2014059543W WO 2014136099 A1 WO2014136099 A1 WO 2014136099A1
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compound
formula
group
process according
mmol
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PCT/IB2014/059543
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French (fr)
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Julian P. Henschke
Yue Chen
Tsung Yu Hsiao
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Scinopharm Taiwan, Ltd.
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Priority to CN201480013172.0A priority Critical patent/CN105308041B/en
Priority to EP14760212.2A priority patent/EP2964645B1/en
Priority to JP2015560841A priority patent/JP6401190B2/en
Publication of WO2014136099A1 publication Critical patent/WO2014136099A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D491/00Heterocyclic compounds containing in the condensed ring system both one or more rings having oxygen atoms as the only ring hetero atoms and one or more rings having nitrogen atoms as the only ring hetero atoms, not provided for by groups C07D451/00 - C07D459/00, C07D463/00, C07D477/00 or C07D489/00
    • C07D491/02Heterocyclic compounds containing in the condensed ring system both one or more rings having oxygen atoms as the only ring hetero atoms and one or more rings having nitrogen atoms as the only ring hetero atoms, not provided for by groups C07D451/00 - C07D459/00, C07D463/00, C07D477/00 or C07D489/00 in which the condensed system contains two hetero rings
    • C07D491/04Ortho-condensed systems
    • C07D491/044Ortho-condensed systems with only one oxygen atom as ring hetero atom in the oxygen-containing ring

Definitions

  • Ixempra 3 ⁇ 4i International non-propriety name (INN): ixabepilone
  • Ixempra 3 ⁇ 4i International non-propriety name (INN): ixabepilone
  • ixabepilone is an injectable antineoplastic agent belonging to the epothilone class. It is a synthetic derivative of the natural product epothilone B (a.k.a., EpoB), with the maero!ide ring oxygen atom replaced with a nitrogen atom to give the corresponding macrolactam.
  • EpoB epothilone B
  • the chemical name of ixabepilone (a.k.a,, aza-EpoB, azaepothilone B and BMS-247550) is
  • Ixabepilone is a white to off-white powder with a molecular formula of C 27 H42N2O5S and a molecular weight of 506.70, Ixabepilone was developed by Bristol- Myers Squibb and was approved by the U.S. Food and Drug Administration (FDA) for the treatment of metastatic breast cancer on October 16, 2007. It is a cytotoxic microtubule stabilizer and the first member of the epothilone family of anticancer agents to be approved.
  • FDA U.S. Food and Drug Administration
  • the C15 epimer (a.ka., 15-e ?;-aza-dEpoB, 15-ep -12,13- desoxy-1 5-azaepothilone B and 15-3 ⁇ 43 ⁇ 4-15-azaepothilone D) of Z-Epo D-lactam has also been reported (Org. Lett. 2000, 2, 1637-1639).
  • U.S. Patent No. 6,605,599 (the '599 patent) describes two approaches for synthesizing azaepothilones such as ixabepilone.
  • One synthetic strategy to prepare the azaepothilone is based on a ring-closing olefin metathesis (RCM) reaction to cyclise a linear amide compound into a macrocyclic lactam (a.ka., a macrolactam).
  • RCM ring-closing olefin metathesis
  • the '599 patent also discloses the preparation of amine derivatives 20 from aldehyde 18 (a commercially available compound) as shown in Scheme 1. Imine derivative 19 is treated with an allylating reagent such as aliylmagnesium bromide.
  • the ' 599 patent does not describe the preparation of a homochiral form of derivative 20, nor does R 15 include any chiral auxiliary compounds.
  • the '599 patent also discloses a method for azaepothilone synthesis from epothilones as shown in Scheme 2.
  • Compounds 103 can be prepared from compounds 5 by reaction with a palladium complex followed by treatment with sodium azide.
  • U.S. Patent No. 6,365,749 discloses a process to produce ring opened epothilone derivatives 1 from epothilones 3 as shown in Scheme 3.
  • the epothilone derivatives 3 can be treated with a palladium catalyst and nitrogen-based nucleophile to provide ring opened epothilone derivatives 1.
  • X is M the derivatives can be macrolactamized to produce azaepothilones.
  • U.S. Patent No. 6,518,421 discloses the conversion of epothilones into azaepothilones as shown in Scheme 4 comprising macro! actone ring opening of epothilones 3 to provide ammonium carboxvlate salts and subsequent macro lactamizati on to afford azaepothilones 2.
  • This can be stepwise or in a single reaction vessel without isolation of the salt intermediate, and can be used to convert epothilone B to ixabepilone.
  • a total synthesis method for the preparation of ixabepilone was disclosed in U.S. Patent No. 6,867,305 and J. Org. Chem. 2001, 66, 4369-4378.
  • This approach comprises 5-alkyl Suzuki coupling of fragments Dl and a borane derivative of alkene D2 (Scheme 5).
  • Dlb was coupled with borane derivative of aikene D2c in 78% yield using a Suzuki coupling, then converted to ixabepilone in a process requiring an additional 8 synthetic steps, including macrolactamization.
  • the Suzuki coupling of the N-BOC amine derivative Ilia' or the azide derivative Dlb with D2a gave only 10% and 63% yields in the Suzuki reaction, respectively.
  • arsenic-based reagents are used in the manufacture of an API, a significant (and costly) burden is placed on the manufacturer to control the level of arsenic to acceptable levels. It is therefore preferable to avoid the use of arsenic-based reagents in API manufacture.
  • a process for preparing a compound of formula I from three building blocks, Unit A, Unit B, and Unit C, is provided.
  • I itself might be useful as a drug substance, or alternatively can be derivatised to provide other substances with useful drug properties.
  • Unit A is ketone XIX or its diastereomer XIX'
  • Jnit B is aldehyde XX
  • Unit C is amino vinyl iodide III (wherein X is I)
  • Unit C [0017] Unit A, Unit B and Unit C are sequentially coupled together to give a compound of formula IV.
  • the compound of formula IV is converted to a compound of formula V.
  • the compound of formula V is then cyclised to give a macrolactam VI or I.
  • the process comprises converting the aldehyde of formula X
  • the present invention provides novel processes for the industrial manufacture of ixabepilone, ixabepilone derivatives and analogues, and intermediates thereof. Salts and prodrugs of the compounds of this invention are also included.
  • the ixabepilone, ixabepilone derivatives, and ixabepilone analogues of this invention are intended for the treatment of disease in humans. II. Definitions
  • azaepothilone refers to a 16-membered polyketide- type lactam belonging to the epoihilone class.
  • a macrolactam is a cyclic amide with 12 or more atoms comprising the ring.
  • aryl and “aromatic ring,” by themselves or as part of another substituent, refer to a polyunsaturated, hydrocarbon group which can be a single ring or multiple rings (up to three rings) which are fused together or linked covalently.
  • Non-limiting examples of aryl groups include phenyl, naphthyl and biphenyl.
  • “Substituted aryl” groups can be substituted with one or more groups selected from halo, hydroxy, amino, alkylamino, amido, acyl, nitro, cyano, and alkoxy.
  • Heteroaryl refers to a monocyclic or fused bicyclic or tricyclic aromatic ring assembly containing 5 to 16 ring atoms, where from 1 to 5 of the ring atoms are a heteroatom such as N, O or S. Additional heteroatoms can also be useful, including, but not limited to, B, Al, Si and P. The heteroatoms can also be oxidized, such as, but not limited to, -S(O)- and -S(0) 2 -. Heteroaryl groups can include any number of ring atoms, such as, 3 to 6, 4 to 6, 5 to 6, 3 to 8, 4 to 8, 5 to 8, 6 to 8, 3 to 9, 3 to 10, 3 to 11, or 3 to 12 ring members.
  • heteroaryl groups can include groups such as pyrrole, pyridine, imidazole, pyrazole, triazoie, tetrazole, pyrazine, pyrimidine, pyridazine, triazine (1 ,2,3-, 1,2,4- and 1,3,5-isomers), thiophene, furan, thiazole, isothiazole, oxazole, and isooxazole.
  • groups such as pyrrole, pyridine, imidazole, pyrazole, triazoie, tetrazole, pyrazine, pyrimidine, pyridazine, triazine (1 ,2,3-, 1,2,4- and 1,3,5-isomers), thiophene, furan, thiazole, isothiazole, oxazole, and isooxazole.
  • heteroaryl groups can also be fused to aromatic ring systems, such as a phenyl ring, to form members including, but not limited to, benzopyrroles such as indole and isoindole, benzopyridmes such as quinoline and isoquinoline, benzopyrazine (quinoxaline), benzopyrimidine (quinazoline), benzopyridazmes such as phthalazme and einnoline, benzothiophene, and benzofuran.
  • Other heteroaryl groups include heteroaryl rings linked by a bond, such as bipyridme. "Substituted heteroaryl" groups can be substituted with one or more groups selected from halo, hydroxy, ammo, alkyiamino, amido, acyl, nitro, cyano, and alkoxy.
  • alkyl by itself or as part of another substituent, means, unless otherwise stated, a straight or branched chain hydrocarbon radical.
  • Alkyl substituents, as well as other hydrocarbon substituents, may contain number designators indicating the number of carbon atoms in the substituent (i.e., Ci ⁇ Cs means one to eight carbons), although such designators may be omitted.
  • the alkyl groups of the present invention contain 1 to 10 carbon atoms.
  • an alkyl group can contain 1-2, 1-3, 1 -4, 1-5, 1-6, 1-7, 1-8, 1-9, 1- 10, 2-3, 2-4, 2-5, 2-6, 3-4, 3-5, 3-6, 4-5, 4- 6 or 5-6 carbon atoms.
  • alkyl groups include methyl, ethyl, w-propyl, isopropyl, «-butyl, -butyl, isobutyl, sec-butyl, «-pentyl, w-hexyl, w-heptyl, «-octyl, and the like.
  • fluoroalkyl refers to alky] group containing one or more fluorine substituents.
  • fluoroalkyl refers to an alkyl group wherein all hydrogen atoms have been replaced with fluorine atoms.
  • fluoralkyl include trifluoromethyl, 2,2,2-trifluoroethyl, and the like.
  • alkenyl refers to a straight chain or branched hydrocarbon having at least 2 carbon atoms and at least one double bond.
  • Alkenyl can include any number of carbons, such as C 2 , C 2-3 , C 2-4 , C 2-5 , C 2-6 , C 2-7 , C 2-8 , C2-9, C 2-1 o, C 3 , C3.4, C3.5, C3.6, C4, C 4 - 5, C 4- 6, C 5 , C 5- 6, and C 6 .
  • Alkenyl groups can have any suitable number of double bonds, including, but not limited to, 1, 2, 3, 4, 5 or more.
  • alkenyl groups include, but are not limited to, vinyl (ethenyl), propenyl, isopropenyl, 1-butenyl, 2-buienyl, isobutenyl, butadienyl, 1-pentenyl, 2-pentenyl, isopentenyl,
  • the term "contacting” refers to the process of bringing into contact at least two distinct species such that they can react. It should be appreciated, however, that the resulting reaction product can be produced directly from a reaction between the added reagents or from an intermediate from one or more of the added reagents that can be produced in the reaction mixture.
  • the term “treating” refers to contacting a substance with at least one other substance.
  • the term “borane derivative” refers to a compound having at least one carbon-boron bond. Borane derivatives include, but are not limited to, boronic acids, alkyl boranes, alkenyi boranes, vinyl boranes.
  • a borane derivative can be formed via reaction of a borane having a formula R 2 BH with a suitable parent molecule such as an alkene.
  • a borane derivative can be isolated and purified before conversion to another compound, or it can be used in situ without isolation and purification.
  • the term "borane” refers to a compounding containing a boron atom bound to three substituents.
  • the borane is an alkylborane containing one or more alkyl substituents.
  • Examples of boranes include, but are not limited to, 9-borabicyclo-[3.3.1]nonane (9-BBN), 9-borabicyclo[3.3.1]nonane dimer (9- BBN dimer), disiamylborane, and dicyclohexylborane.
  • protecting group refers to a moiety that is formed to render a functional moiety unreactive. Forming the moiety is referred to as “protecting” the functional moiety or the molecule that contains the functional moiety. The protecting group can be removed so as to restore the functional moiety to its original state.
  • protecting group Removing the protecting group is referred to as "deprotecting.”
  • Various protecting groups and protecting reagents, including hydroxy protecting groups, are well known to one of ordinary skill in the art and include compounds that are disclosed in Protective Groups in Organic Synthesis, 4th edition, T. W. Greene and P. G. M. Wuts, John Wiley & Sons, New York, 2006, which is incorporated herein by reference in its entirety.
  • the term "vinyl halide” refers to any alkene containing a halogen atom bound to one of the unsaturated carbon atoms in the alkene double bond.
  • transition metal refers to an element characterized by atoms having an incomplete d sub-shell or giving rise to cations having an incomplete d sub-shell.
  • transition metals include Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Y, Zr, Nb, Mo, Tc, Ru, Rh, Pd, Ag, Cd, Hf, Ta, W, Re, Os, Ir Pt, Au, Hg, Rf, Db, Sg, Bh, Hs, Mt, Ds, Rg, Cn.
  • Lanthanides and actinides can also serve as transition metals in the methods of the present invention.
  • transition metal catalyst refers to a compound containing at least one transition metal that participates in a chemical reaction so as to change the rate of the reaction. In general, the transition metal catalyst increases the rate of the reaction and is itself not consumed during the course of the reaction.
  • the transition metal catalyst can be in elemental form, such as palladium black, or the transition metal catalyst can be a coordination complex containing a transition metal bound to one or more iigands.
  • epoxide refers to a three-membered ring containing one oxygen atom and two carbon atoms.
  • the epoxides of the present invention are formed by contacting a precursor such as an alkene with a suitable epoxidizing agent.
  • epoxidizmg agent include, but are not limited to, peroxyacids such as peracetic acid and 3 ⁇ chloroperbenzoic acid.
  • solvent refers to a substance that is liquid at ambient temperature and pressure.
  • solvents include water, acetone, toluene, methylene chloride, ethyl acetate, acetonitrile, tetrahydrofuran, benzene, chloroform, diethyl ether, dimethyl formamide, dimethyl sulfoxide, and petroleum ether.
  • halogen refers to fluorine, chlorine, bromine, and iodine.
  • halide refers to a compound containing a halogen or an anion originating from a parent halogen.
  • benzophenone refers to a ketone substituted with two benzene groups at the carbonyl carbon.
  • Benzophenone imine refers to the imine that would result from the reaction of ammonia and benzophenone.
  • Benzophenone dialkyl acetal refers to an acetal that would result from the reaction of benzophenone with two equivalents of an alkyl-alcohol. The benzophenone imines and benzophenone dialkyl acetals can also be obtained via other reactions.
  • activating refers to increasing the reactivity of a functional group toward a desired reaction partner.
  • Activating a functional group can include forming an intermediate that is more reactive toward the reaction partner than the parent functional group.
  • activating a carbonyl- containing compound includes forming a silyl enol ether.
  • Lewis acid refers to a compound that can accept an electron pair from a second compound, i.e., a Lewis base, to form an acid-base adduct.
  • Lewis acids include, but are not limited to, metal halides such as titanium tetrachloride (T1CI 4 ), zinc dichloride (ZnCl 2 ), and tin di- and tetrachlorides (SnCl 2 and
  • base refers to a molecule that is capable of accepting a proton (i.e., a hydrogen cation) to form a conjugate acid of the base.
  • bases include, but are not limited to, Hunig's base (i.e., N,N-diisopropylethylamine), lutidines including 2,6-lutidine (i.e., 2,6-dimethylpyridine also sometimes referred to a lutidine), triethylamine, and pyridine.
  • diastereomers refers to two or more stereoisomers of a compound that are not related to each other as mirror images (i.e. , not enantiomers).
  • diastereomeric ratio refers to the ratio of one diastereomer to one or more other diastereomers in a mixture of diastereomers.
  • sultam refers to a cyclic sulfonamide compound in which the S-N chemical bond forms part of the ring.
  • sultam refers to the cyclic sulfonamides (l.Z?)-(+)-2,10-camphorsultam or (LS)-(-)-2, 10-camphorsultam, or derivatives of these compounds, otherwise known as camphorsultam or Oppolzers sultam, which are derived from camphor or the enantiomer of camphor.
  • camphorsultam or Oppolzers sultam, which are derived from camphor or the enantiomer of camphor.
  • the synthetic approach to the macrolactam compounds of the invention involves the sequential coupling together of three starting materials (referred herein as units).
  • the building blocks are the ketone referred to as Unit A, such as XIX or its diastereomer XIX', the aldehyde referred to as Unit B, XX, and the ammo vinyl iodide referred to as Unit C, such as III.
  • Unit A such as XIX or its diastereomer XIX'
  • Unit B aldehyde
  • XX the ammo vinyl iodide
  • Unit ABC such as ammo vinyl iodide
  • the linear, acyclic precursor compounds are chemically manipulated to remove protecting groups and then cyclised to give macrolactam compounds (i.e., VI and I) that themselves can be useful as therapeutic agents or can undergo further synthetic manipulations to produce other therapeutic agents, including the epoxide-containing macrolactam compound ixabepilone which is a known therapeutic agent, where necessary.
  • macrolactam compounds i.e., VI and I
  • This synthetic strategy is summarized in Scheme 6.
  • Unit A can be N-((35)-3-oxy-5-oxo-heptanoyl)-bornane-10,2-sultam XVIII or XVHF, or C3 hydroxy protected derivatives XIX or XIX'.
  • Unit A is the ketone XIX or its diastereomer XIX', wherein R 1 is a silyl protecting group (such as triethylsilyl (TES), tnisopropyisilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS)), XIX can be prepared using methods known in the art (see for example Helv. Chim. Acta 2002, 85, 4086-41 10). In more preferred
  • Unit A is the ketone XIX' wherein R ' is a silyl protecting group (such as triethylsilyl (TES), triisopropyl silyl (TIPS), te/ -butyldimethylsilyl (TBS) and tert- butyldiphenylsilyl (TBDPS)).
  • R ' is a silyl protecting group (such as triethylsilyl (TES), triisopropyl silyl (TIPS), te/ -butyldimethylsilyl (TBS) and tert- butyldiphenylsilyl (TBDPS)).
  • TES triethylsilyl
  • TIPS triisopropyl silyl
  • TBS te/ -butyldimethylsilyl
  • TDPS tert- butyldiphenylsilyl
  • XIX can be prepared from XVIII by blocking the hydroxy! group C3-OH. It is known in the art (see Helv. Chim. Acta 2002, 85, 4086- 4110) that XVIII can be prepared by the treatment of commercially available sultam XVI with the Lewis acid diethylboron triflate, followed by treatment with
  • a mixture of aldehyde XVII and the Lewis acid TiCL at -78 °C in an organic solvent, preferably dry dichloromethane (DCM) is reacted with the enantiomer of XVI, namely N- acetylcamphorsultam (N-acetylbornane-10,2-sultam) XVI', that had been activated in an organic solvent, preferably dry DCM, by pre-treatment with a silyl triflate, such as TBSOTf (tert-butyldimethylsilyl triflate), in the presence of an amine base such as EtsN (triethylamine) or 2,6-!utidine.
  • an organic solvent preferably dry dichloromethane
  • Lewis acids such as BF 3 etherate, lanthanide triflates (such as Yb(OTfb), transition metal triflates (such as Sc(OTf)3), magnesium(II) salts, zinc(ll) salts, other ⁇ ( ⁇ ) salts or TMSOTf (trimethylsilyl
  • XVIII' is a diastereomer of compound X VIII, that would be obtained when applying the Lewis acid Bu 2 BOTf using known methods.
  • the key chiral center at C3, which is present in the macro lactam products of this invention, is the same in both XVIII and XVffl' .
  • XVTIP can be reacted with silylating agents such as triethylsilyl chloride (TESC1),
  • TXPSG triisopropylsilyl chloride
  • TSCl tert-butyldimethylsilyl chloride
  • TSSOTf ten- butyldimet ylsilyl inflate
  • TDPSOTf rerf-butyl1 ⁇ 2henylsilyl triflate
  • Both XIX and XIX' can be used as building blocks (i.e., Unit A) for the preparation of ixabepilone, ixabepilone analogues and intermediates thereof.
  • Unit A is the compound of formula XlXa' (N-((35)-3- (ter ⁇ butyidimethyl)silyioxy-5-oxo-heptanoyi)-bornane-10,2-sultam).
  • Unit AB, II is a composite of Unit A and Unit B and comprises a N-((3S)-3,7- dioxy-5-oxo-undec-l 0-enoyl)-bornane-l 0,2-sultam moiety.
  • II can be the partially hydroxy-protected compounds XXII or XXII' or the fully hydroxy-protected compounds Ila or Ha'.
  • the partially protected and fully protected compounds can all be used in the preparation of ixabepilone, the ixabepilone analogues, and the intermediates of this invention.
  • the use of Ila' is more preferred than the use of Ha as the doubly TBS- protected compound Ilax' can be more readily isolated as a crystalline solid, making its purification more convenient, more efficient and less costly, on a manufacturing scale.
  • Unit AB (II) can be prepared by the aldol reaction of ketone XIX or XIX' and aldehyde XX (Scheme 8).
  • R “ and R " are independently H (hydrogen) or a protecting group PG 1 and PG 2 .
  • the protecting groups are preferably silyl protecting groups, such as TES, TIPS, TBS or TBDPS for example.
  • Examples of Unit AB are compounds of the formula XXII, XXII', Ha, or Ila'.
  • Ila and Ila' are prepared by further protection of XXII and XXII'. In preferred embodiments R !
  • Unit AB is the compound of formula Ilax'.
  • PG 3 aiky! or siiyl
  • a diastereoselective aldol reaction of Unit A and Unit B is used such that the major reaction Unit AB products, compounds of formula II (which is embodied as compounds of formula XXII and XXII'), possesses the requisite
  • the aldol reaction is the condensation reaction of ketone XlXa' and aldehyde XX and the major product is the compound of formula XXIIa'.
  • Unit B is the aldehyde compound of formula XX.
  • Aldehyde XX can be prepared using methods reported in the arts (see for example, Org. Lett. 2009, 77, 5326- 5328). Good stereoselectivity in the titanium enolate aldol reaction of ketone XIX, where R 1 is TBS, with cc-methyl aldehydes has been reported (for example, see Org. Lett. 2002, 4, 3811-3814; J. Org. Chem.
  • oc-Methyl aldehydes XXIQa and XXIIIb have been proposed to be intermediates for the synthesis of epothilone B and D.
  • the use of these titanium enolate aldol reaction, however, for the coupling of suitani-containing ketones XIX or XIX', with aldehyde XX has not been reported for the preparation of intermediates useful in azaepothilone synthesis.
  • the diastereoselective titanium- enolate aldol reaction of ketones XIX or XIX' and aldehyde XX as described herein can be conducted using reaction conditions reported in the arts for titanium-enolate aldol reaction of ketones and aldehydes.
  • the ketone XIX or XIX' is activated by treatment with a titanium-based Lewis acid such as TiCl 4 or TiBr 4 , preferably TiCl 4 , at a low temperature, preferably colder than -50 °C more preferably colder than -70 °C and most preferably between about -70 to -78 °C, in an organic solvent preferably DCM, followed by addition of an amine base, such as DIPEA (AyV-diisopropylethylamine; Hunig's base), Et 3 N, B133N, preferably DIPEA.
  • a titanium-based Lewis acid such as TiCl 4 or TiBr 4 , preferably TiCl 4
  • the aldehyde is added to the activated ketone mixture that is maintained at a low temperature, preferably colder than -50 °C, more preferably colder than -70 °C, and most preferably between about -73 to -78 °C.
  • the aldehyde XX is added either neat (no solvent) or in an organic solvent such as DCM, pentane, hexanes, petroleum ether, or n-heptane, or in a mixture of organic solvents, such as DCM and n- heptane.
  • Some solvents including THF (tetrahydrofuran), when present at high enough levels can inhibit the aldol reaction of XIX or XIX' and XX i this invention and therefore should be avoided.
  • the molar equivalents of aldehyde XX can be varied with respect to ketone XIX or XIX', however, it has now been found that at least 1.5 molar equivalents of aldehyde XX should be used, and more preferably more than 3 molar equivalents of aldehyde XX should be used to allow good conversion of the ketone XIX or XIX' to the product XXII and XXII'.
  • reaction mixture can be held at a low temperature (between about -70 to -78 °C) for a period of time, or allowed to warm up to about 0 °C before reaction workup to isolate the product XXII and XXII'.
  • the diastereoselective titanium-enolate aldol reaction of XIX or XIX' and XX in this invention provides different diastereomenc ratios (d.r.) of the products XXII or XXII', respectively (Scheme 9).
  • the aldol reaction of XlXa and XX provides XXIIa with a d.r.
  • the isolated XXIIa' (which is the compound of formula XXII' where R ! is TBS and R 2 is H) does not require purification and can be used in the next reaction step to provide Ilax' (which is the compound of formula Ila' where R J is TBS and R " is TBS).
  • the compound of formula Ila', where R 2 is a silyl protecting group, is prepared by silylation of XXIIa' under reaction conditions known in the arts for the silylation of secondaiy alcohols.
  • the compound of formula XXIIa' is silyiated by its reaction with TBSOTf (tert-butyldimethylsilyl triflate) in an organic solvent, preferably diy DCM, in the presence of a base, such as 2,6- lutidine or imidazole, more preferably 2,6-lutidine.
  • TBSOTf tert-butyldimethylsilyl triflate
  • a base such as 2,6- lutidine or imidazole, more preferably 2,6-lutidine.
  • XXIIa Purification of XXIIa by column chromatography to remove the unwanted (6S,7R)- diastereomer of XXIIa (leaving the d.r. of the isolated XXIIa at about 99: 1) insures that Ilax of high chiral purity can be obtained, . .
  • the compound of formula Ila can be purified by methods known in the art such as column chromatography.
  • Ilax of this invention can be obtained with a d.r. of about 99: 1 when its precursor XXIIa is purified by column chromatography as just described.
  • the solid compound Ilax' is purified by recrystallisation from organic solvents including MeOH.
  • Recrystallisation of crude Ilax' from MeOH provides Ilax' with a high chemical and chiral purity.
  • the d.r. of the (6i?,7i )-diastereomer / (65,7A 3 )-diastereomer of reerystaliised Ilax' is greater than or equal to 99 : 1.
  • Multiple recrystallisation can provide an even higher d.r. of the (6i?,75)- diastereomer / (6 ⁇ $,7/?)-diastereomer of reerystaliised Ilax'.
  • Ilax and Ilax' can be used in this invention for the manufacture of ixabepilone or its analogues and derivatives, Ilax' is preferred due to its high chiral purity, and its convenience in manufacturing.
  • Ilax derived from the natural product (+)-camphor is an oil
  • the two of compounds ⁇ i.e., XXII' and Ilax') derived from the unnatural enantiomer of (+)-camphor are solids.
  • the consequence of this difference in physical property of the diastereomeric compounds is that the manufacture of Ilax' is more efficient than that of Ilax.
  • Ilax' can be prepared with a greater than or equal to 99: 1 diastereomeric ratio of the (6i?,75)-diastereomer /
  • XIX' , XXII' and Ilax' are used as intermediates rather than the corresponding diastereomers XIX, XXII and Ilax.
  • Still other advantages, described below, are that the hydrolysis of the sultam- containing intermediate IVax', derived from Ilax', provides XXVIax in higher yield than does the hydrolysis of the corresponding sultam-containing intermediate IVax, which is a diastereomer of IVax', and which is derived from Ilax.
  • the sultam group (Z is sultam ST or sultam ST') of the compounds of formula II (Unit AB) can be removed and changed to oxygen-based groups such as alkyl esters or silyl esters. This can be achieved by hydrolysis of the amide bond of the compound of formula Ila or Ha' using methods known in the art (such as hydrolysis using LiOH or NaOH and H 2 0 2 , for example) to provide carboxylic acid derivatives of II, such as
  • esters which are then estenfied to provide esters (Scheme 8), such as XXVa, using methods known in the art. These esters can be used to prepare ixabepilone and its derivatives and analogues.
  • Unit C is represented by the generic formula III (Scheme 10).
  • R A is an unsubstituted or substituted aryl group or an unsubstituted or substituted heteroaryl group, and is preferably the radical 2-methyl-thiazol-4-yl.
  • R B and R c are independently alkyl, fluoroalkyl, an unsubstituted or substituted aryl group or an unsubstituted or substituted heteroaryl group, and are both preferably methyl.
  • X is a halogen selected from the group I, Br and CI, or a non-halogen such as inflate (OSO 2 CF 3 ) or phosphate (OPO(OR) 2 ), and is preferably I.
  • R 3 and R 4 are independently hydrogen (H) or a protecting group.
  • III is compounds of the formula III', and in the preferred embodiments useful for the synthesis of ixabepilone, III is Ilia'. Ill can also be Illb', IIId ⁇ iIIe', and nic'.
  • III embodied as Illb', Ilia', Hid', Hie', and ⁇ ', is prepared using novel methods that include the 1,2-addition of an allylating reagent AL to the C-N double bond of chiral N-sulfinyl irnines XI as a key reaction step to provide chiral N-sulfxnyl amines XII (Scheme 10) with high stereo purity.
  • N-Sulfinyl imines XI can be prepared from ⁇ , ⁇ -unsaturated aldehydes X by condensation with te -butanesulfinamide using conditions such as those provided in Chem. Rev., 2010, 110, 3600-3740 or using methods described herein.
  • Xa can be reacted with ( ?)-(+)-N-fe7 -bu ⁇ anesu3fmamide in dry solvents, preferably in dry toluene, in the presence of activating agents such as Ti(0/-Pr) , Ti(OEt) 4 , MgS0 4 , CsC0 3 or HSO 4 , most preferably in the presence of KHS0 4 , at room temperature for several hours followed by aqueous workup and concentration under vacuum to provide XIa.
  • activating agents such as Ti(0/-Pr) , Ti(OEt) 4 , MgS0 4 , CsC0 3 or HSO 4 , most preferably in the presence of KHS0 4 , at room temperature for several hours followed by aqueous workup and concentration under vacuum to provide XIa.
  • the atom M of the allylating reagent AL can be a metal or a metalloid useful in 1,2-additions to C-N double bonds including Mg, Zn, In, Li, Sn, Ce, AS, B, lanthanides or Si. Magnesium is more preferred due to high stereoselectivities (> 98% d.e. (diastereomeric excess)) that can be obtained in the 1 ,2-addition reaction.
  • n in the formula AL can be 1, 2, 3 or 4, but preferably is 1.
  • a solution in a dry organic solvent such as DCM, diethyl ether, THF or 2-Me-THF (2-methyltetrahydrofuran), more preferably a solution in dry DCM or dry 2- Me-THF, of XIa can be reacted with allyl magnesium bromide, ALa, in diethyl ether or in 2-Me-THF, more preferably in 2-Me-THF, at about ⁇ -40 °C.
  • allyl magnesium bromide in diethyl ether is commercially available, improved
  • allyl magnesium bromide is prepared in 2-Me-THF. It is therefore preferred that allyl magnesium bromide in 2-Me-THF is used in this reaction.
  • the product mixture can be treated with a mild aqueous acid, such as saturated aqueous ammonium chloride, at about -20 °C followed by warming to room temperature.
  • a mild aqueous acid such as saturated aqueous ammonium chloride
  • Xlla can be isolated with a high chemical purity and a high diastereomeric purity (d.e.), such as >99% d.e., as a solid compound by precipitating it from a solution of MTBE (methyl tert-butyl ether) and «-heptane.
  • allyl derivatives of metalloids such as boron and silicon, might be useful on their own or in the presence of activating agents such as Lewis acids, such as TMSOTf, Ti(IV) and Al(III) salts, or TBAF (tetra-JV- butylammonium fluoride) or MeLi, as replacements for the allylating reagent AL.
  • the allylating reagent AL is allyl magnesium bromide (ALa), III is any of Ifflb', Ilia', ⁇ ', Hie', or Hie' (Scheme 1 1), and is preferably lilfo'.
  • Ilia' is useful for the manufacture of ixabepilone and its derivatives and analogues using methods described herein.
  • the allyl amine Xllla can be converted to its N-tert-butoxycarbonyl (iV-BOC) protected derivative XlVax by treatment with di-ferf-butyl dicarbonate (also known as BOC anhydride or BOC 2 0) in an organic solvent such as THF, 2-Me-THF or DCM, preferably DCM, opti onally in the presence of a base, such as Et 3 N.
  • di-ferf-butyl dicarbonate also known as BOC anhydride or BOC 2 0
  • organic solvent such as THF, 2-Me-THF or DCM, preferably DCM, opti onally in the presence of a base, such as Et 3 N.
  • Xllla in DCM is reacted with di-fert-butyl dicarbonate in the absence of a base and following completion of the reaction the product mixture is concentrated and XlVax is precipitated in high yield and high chemical purity by the addition of «-heptane.
  • the olefin XIV can be converted to aldehyde XV by a one- pot/two-step dihydroxylation and oxidation reaction sequence without isolation of the dihydroxylated reaction intermediate XXI.
  • This sequence involves the dihydroxylation of the double bond of XIV using a first oxidant to provide dihydroxy compound XXI.
  • the first oxidation can be an oxidant such as H 2 0 2 , i-BuOOH, DMDO
  • TM-CPBA TM-chloroperoxybenzoic acid
  • metallic conditions such as using catalytic or stoichiometric amount of Rh, Ru, Pt, Pd, Cu, Ce or Os salts in combination with other oxidants such as periodates or peroxides in the presence or in the absence of ligands in one step, and is preferably a combination of a catalytic amount of an osmate reagent and 4-methylmorpholine N-oxide using solvents such as water, ketones, alcohols, ethers, nitriles or ionic liquids or any combination of these but more preferably a mixture of acetone and water.
  • solvents such as water, ketones, alcohols, ethers, nitriles or ionic liquids or any combination of these but more preferably a mixture of acetone and water.
  • an agent is added to the product mixture that retards or deactivates the oxidative ability of the osmium salt
  • This deactivating agent is preferably a Lewis base, such as pyridine or a pyridine derivative such as NN-dimethyl-4-aminopyridine (DMAP). This deactivation is necessary to inhibit oxidation of the remaining double bond in the second reaction step (i.e., in the conversion of dihydroxy compound XXI to aldehyde XV).
  • the second oxidant can be NaI0 4 , HI0 4 , PbI(OAc) 2 or Pb(OAc) 4 , and is preferably NaI0 4 using solvents such as water, ethers, dioxane, nitriles, EtOAc (ethyl acetate) or chlorinated hydrocarbons but more preferably a mixture of acetone and water.
  • This reaction sequence provides an advantage on manufacturing scale because the dihydroxy intermediate XXI does not require isolation, but instead can be directly converted into aldehyde XV in the same reaction vessel using the same solvents upon addition of the second oxidant.
  • dihydroxylation of the double bond of XIV is accomplished using an oxidant to provide dihydroxy compound XXI.
  • the oxidant can be an oxidant such as H 2 0 2 , t-BuOOH, DMDO, « ⁇ -CPBA or metallic reagents such as a catalytic or stoichiometric amount of Rh, Ru, Pt, Pd, Cu, Ce or Os salts in combination with other oxidants such as periodates or peroxides in the presence or in the absence of ligands, and is preferably a combination of a catalytic amount of an osmate reagent and 4-methylmorpholine N-oxide in the presence of (DHQ) 2 PHAL using solvents such as a mixture of THF and water.
  • the dihydroxy compound XXI is then isolated and purified using techniques known in the arts such as crystallisation or chromatography.
  • the purified dihydroxy compound XXI is then oxidized to provide aldehyde XV using an oxidant.
  • the oxidant can be NaI0 4 , HTO4, PbI(OAc) 2 or Pb(OAc) 4 , and is preferably NaI0 4 using solvents such as water, ethers, dioxane, nitriles, EtOAc or chlorinated hydrocarbons but more preferably a mixture of THF and water.
  • (ethyl)triphenylphosphonium iodide is deprotonated with a strong base, such a n-BuLi, in an organic solvent, such as THF or 2-Me-THF, at a temperature lower than ambient temperature, preferably about 0 to 10 °C.
  • a strong base such as a n-BuLi
  • organic solvent such as THF or 2-Me-THF
  • the deprotonated intermediate is then cooled to about -50 to -60 °C and is iodmated with an lodmatmg agent such as iodine.
  • an lodmatmg agent such as iodine.
  • the thus formed crude (l-iodoethyl)triphenylphosphonium iodide is isolated from the reaction slurry by filtration. Purification of the crude (l-iodoethyl)triphenylphosphonium iodide is preferred because it provides better efficiency in the subsequent reaction
  • Purification of the crude (l-iodoethyl)triphenylphosphonium iodide can be achieved by- stirring a slurry of the crude (l-iodoethyl)triphenylphosphonium iodide in an organic solvent for a sufficient period of time and then filtering.
  • the organic solvent is one that preferentially can dissolve the impurities whilst not substantially dissolving (1- iodoethyl)triphenylphosphonium iodide.
  • Preferred solvents include DCM or MeCN (acetonitnle).
  • This slurry process effects the removal of certain impurities, such as unreacted (ethyl)triphenylphosphonium iodide, that can otherwise lead to impurity formation in the next reaction step. It is more preferred that this slurry purification is conducted in DCM because it has a low boiling point and is readily removed from the purified (l-iodoethyl)triphenylphosphonium iodide upon drying of the isolated solid.
  • Purified (l-iodoethyl)triphenylphosphonium iodide is dried using techniques known in the art, preferably in a vacuum oven, to remove any inadvertently absorbed moisture.
  • the dried reagent is then mixed with an organic solvent, such as THF, 2-Me- THF, MeCN or toluene or a combination of 2-Me-THF with TPPA
  • R 4 is tert- butyloxy car bony 1 (BOC; t-BOC; Boc)
  • R 3 is H
  • R A is a 2-methyl-thiazol-4-yl group
  • R B and R u is methyl
  • X is I
  • the generic formula III (Unit C) is the compound of formula Ilia'.
  • the compound of formula Ilia' is useful for the manufacture of ixabepilone. Deprotection of R 4 of Ilia', using methods disclosed herein, provides ally!
  • amine Illb' which can be isolated in its free base form or as a salt (where HX is a Bransted acid, H is a proton and X is a conjugate base, such as HC1 for example in the compound of formula IIIb*HG). Ally! amine Illb' can be used for the manufacture of ixabepilone. Alternatively, allyl amine Illb' can be reacted with benzophenone in the presence of a catalyst to provide benzophenone imine Hie'.
  • further BOC protection of Ilia' using methods disclosed herein, including deprotonation of Ilia' with a base such as NaHMDS and reacting the deprotonated form of Ilia' with ⁇ -tert- butyl di carbonate, provides bis-BOC protected vinyl halide Hid'.
  • Bis-BOC protected vinyl halide Hid' can be used for the manufacture of ixabepilone.
  • oxidation of both the sulfur atom and double bond of XII using methods disclosed herein, provides aldehyde XVb' that can then be homologated via a two-step oxidation and Wittig reaction sequence, to provide the vinyl halide Hie' when R 4 is H, R B is methyl (Me) and R A is a 2-methyl-thiazol-4-yl group.
  • the acyclic precursor of ixabepilone and ixabepilone analogues of this invention, IV are prepared by coupling of borane derivatives of alkenes II (Unit AB) with vinyl halides III (Unit C) by use of a carbon-carbon coupling reaction, such as a B- alkyl Suzuki reaction (Scheme 13).
  • a carbon-carbon coupling reaction such as a B- alkyl Suzuki reaction (Scheme 13).
  • the U-alkyl Suzuki reaction is a metal catalysed carbon-carbon bond forming reaction.
  • the borane derivatives, also known as alkyl boranes, of the alkene II that are used in the i?-alkyl Suzuki reaction can be prepared by the reaction of the alkene with a borane including 9-borabicyclo-[3.3.1 Jnonane (9-BBN), 9-borabicyclo[3.3.1]nonane dimer (9-BBN dimer), disiamylborane, dicyclohexylborane, or other borane derivatives, using methods in the known art.
  • 9-BBN, or its dimer is the most preferred borane for hydroboration of Ha or Ila' that is useful in the coupling of Ha or Ila' and Ilia.
  • the alkyl boranes produced upon hydroboration of Ila or Ha' can be used directly in the Suzuki reaction without the isolation or purification.
  • the Z?-alkyl Suzuki reaction is well known in the arts (for example, see J Am. Chem. Soc. 1989, I II, 31 -321 and Chem. Rev. 1995, 95, 2457-2483).
  • the Suzuki reaction or the if-alkyl Suzuki reaction of alkenes II are employed according to the methods of the invention, the alkenes are first converted to their borane derivatives prior to the palladium-catalysed coupling step.
  • III is any of IHb, Ilia, Hid, Die, or IIIc, and is preferably Illb, Ilia, or Did, more preferably DIb or Ilia, and most preferably Ilia, and this is coupled in the Suzuki reaction with a borane derivative of the alkene compounds XXII, XXII', Da or Da', most preferably a 9-BBN derivative of Da', to give IV (Scheme 14).
  • R 3 and R 4 are H or BOC, while more preferably R 3 is H and R is BOC.
  • R and R are H or protecting groups, preferably silyl protecting groups including TES, TIPS, TBS and TBDPS, most preferably TBS.
  • Da' is more preferred than Da as the sultam group ST' of Da' can be removed more efficiently to provide carboxylic acid XXVIa than the sultam group ST of Da.
  • Dax' is coupled with IDa' giving IV where Z is sultam ST', R ' and " is TBS, R' is H and R 4 is BOC and R A is 2- methyl-thiazol-4-yl, R J and "" is methyl.
  • IVax and IVax' i.e., IV where R 1 is R 2 is TBS, Z is sultam ST or sultam ST', R 3 is H, R 4 is BOC
  • an arsenic-based iigand, triphenylarsine (AsPh 3 ) (as reported for the Suzuki reaction examples in J. Org. Chem. 2001, 66, 4369-4378), was not required in the coupling of N-BOC amine derivative Ilia with the 9-BBN hydroborated derivatives of Ila or Ila' as described herein.
  • azaepothilones including ixa
  • the acyclic precursor with the formula IV is then converted to the acyclic precursor ammo acid compound of formula V by removal of the Z group and the nitrogen protecting groups R 3 and R 4 (when R 3 is not H) (Scheme 15).
  • the removal of the Z group and protecting groups R 3 and R 4 (when R 3 is not H) can be conducted in either order (i.e., the Z group can be removed prior to R 3 and R 4 (when R 3 is not H) or vice versa) to provide intermediate XXVI.
  • the Z group is an alkyl ester such as a ten-butyl ester or a silyl ester such as 2-(trimethylsilyl)ethoxymethyl (SEM), and R " (and R 3 if it is not H) is a Bransted and/or Lewis acid sensitive protecting group such as BOC, the Z group is optionally removed simultaneously with the removal of R 4 (and R 3 if it is not H) using ! irons led acids such as trifluoroaeetie acid (TEA) or Lewis acids such as trimethyisilyl trifluoromethanesulfonate (TMSOTf).
  • TAA trifluoroaeetie acid
  • TMSOTf trimethyisilyl trifluoromethanesulfonate
  • the Z group is an alkyl ester such as a te/ -butyl ester or a silyl ester such as SEM
  • R 1 and R 2 are silyl protecting groups such as TES, TIPS, TBS or TBDPS.
  • protecting groups R 1 and R 2 can be removed at the same time as R 4 (and R 3 if it is not H) such that the amino acid IX wherein R s and R 2 are H is obtained, which is a fully unprotected intermediate useful for the synthesis of azaepothilones such as ixabepilone.
  • the linear ammo acids V are then cyclised by macrolactamization reactions to provide macrolactanis VI using methods known in the art.
  • a macrolactamization reaction is the formation of a large cyclic amide from a linear amino acid or an amino acid derivative such as an ammo ester.
  • Deprotection of the protecting groups R ! and R 2 of macrolactanis VI then provides azaepothilones I.
  • R 1 and R 2 are H in IX
  • macrolactamization of IX directly provides azaepothilones I.
  • macrolactanis I are then converted into the epoxide containing azaepothilones by epoxidation using known methods.
  • R 1 H or PG'
  • R 2 H or PG 2
  • R 1 and R 2 are TBS, R 4 and R 4 are BOC, R 3 and R 3 are H, and Z is sultam ST or sultam ST', or SEM.
  • R A is 2-methyl- thiazol-4-yl, R B and R c are methyl.
  • the acyclic precursor IV is a compound of formula lVax or IVax'
  • acyclic precursor XXVI is a compound of formula XXVIax or XXVIbx or XXVlbx'
  • acyclic precursor V is a compound of formula Vax
  • macrolactam VI is a compound of formula Vlax
  • macrolactam I is a compound of formula la and the epoxide containing azaepothilone VII is ixabepilone (Scheme 16 and 15).
  • the acyclic precursor IV is a compound of formula XXVHax or XXVJIax' (Scheme 18), and the fully unprotected acyclic precursor IX is a compound of formula IXa (Scheme 17).
  • R 4 is BOC and when the Z group is sultam ST or sultam ST', the Z group of intermediate XXVI is converted to OH prior to deprotection of R ** (R 4 ).
  • the sultam- containing compounds IVax or IVax' provided herein can be converted to Vax via two different routes.
  • the sultam group of compounds IVax or IVax' is removed by hydrolysis to provide XXVIax using a mixture of a hydroxide and an organic solvents or mixtures of solvents.
  • hydrogen peroxide H 2 0 2
  • the H 2 0 2 can be aqueous H 2 0 2 .
  • Hydroxides include alkali metal hydroxides such as, but not limited to, LiOH, NaOH, KOH, CsOH, alkaline earth metal hydroxides such as, but not limited to, ⁇ ( ⁇ I) ⁇ ..
  • H 2 0 2 is preferably an aqueous solution.
  • XXVIax When using NaOH as the hydroxide, 2-Me-THF or THF and MeOH are preferred solvent mixtures and yields of XXVIax of greater than 70%.
  • DME dimethoxyethane
  • the BOC protecting group of XXVIax is removed using a Bransted acid, such as HC1 or H 2 S0 4 , or a Lewis acid such as TMSOTf in a solvent such as DCM (dichloromethane).
  • TMSOTf is used to effect removal of the BOC protecting group to provide amino acid compound Vax, preferably the reaction is conducted in the presence of 2,6-lutidme (2,6- dimethylpyridine).
  • TFA is used instead of TMSOTf, both the BOC group and the TBS groups of XXVIax are simultaneously removed to provide the fully unprotected ammo acid compound IXa (Scheme 17).
  • Compounds IVax or IVax' can be converted to Vax using an alternative reaction sequence.
  • This alternative reaction sequence comprises the treatment of compound IVax or compound IVax' with a reagent system that can deprotected the BOC protecting group, such as TMSOTf in DCM in the presence of 2,6- lutidine to provide compound XXVIbx or compound X VIbx', respectively, that can then be converted to amino acid compound Vax upon treatment with a mixture of a hydroxide, H 2 0 2 and an organic solvent or in a mixture of organic solvents.
  • a reagent system that can deprotected the BOC protecting group, such as TMSOTf in DCM in the presence of 2,6- lutidine to provide compound XXVIbx or compound X VIbx', respectively, that can then be converted to amino acid compound Vax upon treatment with a mixture of a hydroxide, H 2 0 2 and an organic solvent or in a mixture of organic solvents.
  • compound XXVIbx or XXVIbx' can be converted to ammo acid compound Vax upon treatment with Li OH or NaOH, aqueous 3 ⁇ 40 2 in 2-Me-THF or THF and MeOH or mixtures thereof, or upon treatment with tetrabutylammonium hydroxide (TB AH) and aqueous H1O 2 in DME.
  • TB AH tetrabutylammonium hydroxide
  • This alternative route to amino acid compound Vax i.e., via compound XXVIbx or XXVIbx'
  • the conversion of compound Wax or IVax' to compound XXVIax and then the conversion of compound XXVIax to amino acid compound Vax is preferred to the corresponding conversion of compound IVax or IVax' to compound XXVIbx or XXVIbx' and then the conversion of compound XXVIbx or XXVIbx' to amino acid compound Vax.
  • the intermediate of formula IVax' is converted to the compound of formula XXVIax which is then converted to the compound of formula Vax.
  • Ammo acid Vax of this invention is converted to macrolactam V ax using known conditions for macrolactamization.
  • Conditions that can be used for the macrolactamization include those used for peptide coupling reactions known in the arts, which include the use of phosphonium coupling reagents, such as PyBOP (benzotriazol- l-yloxytri(pyrrolidino)-phosphonium hexafluorophosphate), uronium coupling reagents, such as HATU (0-(7-azabenzotriazol-l-yl)-l ,l,3,3-tetramethyluronium
  • phosphonium coupling reagents such as PyBOP (benzotriazol- l-yloxytri(pyrrolidino)-phosphonium hexafluorophosphate)
  • uronium coupling reagents such as HATU (0-(7-azabenzotriazol-l-yl)-l ,
  • immonium coupling reagents such as BOMI (benzotriazol-1- yloxy-AyV-dimethyl-methanimmium hexachloroantimonate), carbodiimide coupling reagents, such as DCC (N,A "dicyciohexylcarbodiimide), imidazolium coupling reagents, such as GDI ( ⁇ , ⁇ -carbonyldiimidazole) or BOI (2-(benzotriazol-l-yl)oxy-l,3-dimethyl- imidazolidinium hexafluorophosphate), organophosphorous coupling reagents, such as BOP-C1 (N,N'-bis(2-oxo-3-oxazolidinyl)-phosphinic chloride), acid halogenating coupling reagents, such as cyanuric chloride or TFFH ⁇ luorQ- ⁇ , ⁇
  • Conditions that can be used for the macrolactamization of fully unprotected amino acid IXa to provide azaepothilone la include those used for peptide coupling reactions known in the arts, which include the use of peptide coupling agents, such as, but not limited to, HATU, in solvents such as but not limited to THF in the presence of bases, such but not limited to DIPEA.
  • peptide coupling agents such as, but not limited to, HATU
  • solvents such as but not limited to THF in the presence of bases, such but not limited to DIPEA.
  • Triphenyiarsine is an organic arsenic compound and arsenic is known to be toxic.
  • the Suzuki reaction step described herein to couple compound II and compound III to provide product IV proceeds in higher yields than the method described in J. Org. Chem. 2001, 66, 4369-4378.
  • the iV-BOC protected amine Ilia' is coupled with Ilax', >90% yield can typically be obtained.
  • the yield reported in J Org. Chem. 2001, 66, 4369-4378 for the coupling of N- BOC protected amine Ilia' with compound D2a was only 10%.
  • Chiral amine derivative XII is a novel compound that can be prepared with high chiral purity using an aspect of this invention [e.g., the allyl Gngnard reagent addition to compound XI). This chiral amine is useful for the synthesis of a whole series of N- protected analogues, III, which have been shown herein to be useful in the synthesis of ixabepilone.
  • Ixabepilone can be prepared from three building blocks, and in some embodiments these three building blocks can be prepared using known methods, and in other embodiments these can be prepared using methods described herein.
  • the present invention provides a process for preparing an azaepothilone of formula I
  • R A is selected from substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl;
  • R B is selected from IT, alkyl and substituted or unsubstituted aryl
  • R c is selected from H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and
  • R J and R z are independently selected from hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and feri-butyldiphenylsilyl (TBDPS),
  • R J and R " are independently selected from H, tert- butyloxycarbonyl (BOC), or tert-butylsulfonyl (S0 2 i ⁇ Bu), or together R 3 and R 4 are CPh 2 , in the presence of a transition metal catalyst to provide a compound of the formula
  • R 3 and R '* are other than H
  • the invention provides a process for preparing epoxide- containing azaepothilone of formula V I
  • R ' is selected from substituted or unsubstituted arvl and substituted or unsubstituted heteroaryl;
  • R b is selected from H, alkyl, and substituted or unsubstituted aryl;
  • R c is selected from H, alkyl, substituted or unsubstituted aryl, substituted or
  • R .1 and R' are independently selected from hydrogen, silylalkyl TES, TIPS, TBS and TBDPS,
  • the compound of formula VI is prepared according to a method including: a) contacting a borane derivative of a compound of formula II
  • Z is selected from the group consisting o
  • R 1 and R are independently selected from hydrogen, triethylsifyl (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS),
  • TES triethylsifyl
  • TIPS triisopropylsilyl
  • TBS fert-butyldimethylsilyl
  • TDPS tert-butyldiphenylsilyl
  • R 3 and R * are independently selected from H, tert- butyloxycarbonyl (BOC), and tert-butylsulfonyl (S0 2 t-Bu), or together R J and R 4 are CPh 2 ,
  • the invention provides a process for the preparation of a compound of formula I
  • R' is selected from substituted or unsubstituted aryl and substituted or unsubstitute heteroaryl
  • R B is selected from H, alkyl and substituted or unsubstituted aryl
  • R c is selected from H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and
  • R and R " are independently selected from hydrogen, tnethylsilyl (TES), triisopropylsiiyl (TIPS), tert-butyldimethyisilyl (TBS) and te/ -butyldiphenylsilyl (TBDPS),
  • TES tnethylsilyl
  • TIPS triisopropylsiiyl
  • TBS tert-butyldimethyisilyl
  • TDPS te/ -butyldiphenylsilyl
  • R and R 4 are independently selected from H, tert- butyloxycarbonyl (BQC), or fert-butylsulfonyl (S0 2 t-Bu), or together R' and R 4 are CPh 2)
  • the borane derivative is prepared from the compound of formula II by reaction with a borane selected from the group consisting of 9-borabicyclo- [3.3. ljnonane (9-BBN), 9-borabicyclo[3.3.1 ]nonane dimer (9-BBN dimer),
  • the borane is selected from 9-borabicyelo ⁇ [3, 3. l jnonane (9-BBN) and 9-borabicyclo[3.3. l jnonane dimer (9- BBN dimer).
  • the transition metal catalyst includes a metal selected from Ni and Pd.
  • Z is converted to OH by treatment of the compound of formula IV with a mixture including aqueous H 2 0 2 , a hydroxide, and a solvent.
  • the hydroxide is selected from the group consisting of sodium hydroxide and lithium hydroxide and the solvent comprises a mixture of 2-methyltetrahydrofuran or tetrahydrofuran and methanol.
  • the processes further includes converting the compound of formula I to an epoxide-containing azaepothilone of formula VII
  • R A is a 2-methyl-thiazol-4-yl group
  • R B and R c are methyl.
  • the invention provides a process for preparing a compound of formula III'
  • R A is aryl or heteroaryl
  • R B and R c is selected from the group consisting of H, alkyl, fluoroalkyl, an unsubstituted or substituted aryl group, and an unsubstituted or substituted heteroaryl group
  • n is between 1 to 4, to provide a compound of formula XII
  • X is a halogen and subscript m is 0, 1 or 2;
  • the organic solvent of step a) is toluene and the activating reagent is KHSO 4
  • M is selected from Mg, Zn, and In.
  • step b) provides a mixture of the compound of formula XII and a diastereomer of the formula
  • the allylating reagent of step b) is allyl magnesium bromide and the organic solvent is a mixture of 2-methyltetrahydrofuran and dichloromethane.
  • the compound of formula Ilia is further converted to a compound of formula Illb
  • the compound of formula Illb is further converted to a compound of formula IIIc
  • Ilia is further converted to a compound of formula
  • the invention provides a process for the preparation of
  • R A is selected from aryl and heteroaryl
  • R B and R c is selected from H, alkyl and aryl
  • the compound of formula XII is prepared by a process including: a) converting a compound of formula X
  • n is a value between 1 and 4, to the compound of formula XI to provide compound of formula XII.
  • R A is a 2-methyl-thiazol-4-yl group
  • the invention provides a process for the preparation of a compound of formula II
  • R ! and R 2 are independently selected from hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), fe/f-butvddimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS);
  • TES triethylsilyl
  • TIPS triisopropylsilyl
  • TBS fe/f-butvddimethylsilyl
  • TDPS tert-butyldiphenylsilyl
  • TES triethylsilyl
  • TIPS triisopropylsilyl
  • TBS tert-butyldimethylsilyl
  • TDPS fert-butyldiphenylsilyl
  • R " is H; e) optionally protecting the hydroxy! group of the compound of formula II with a protecting group selected from the group consisting of triethylsilyl (TES), triisopropylsilyl (TIPS), tert-butyldimethyisilyl (TBS) and ter -butyldiphenylsily3 (TBDPS) to provide a compound of formula II wherein R 1 and R 2 are both hydroxy protecting groups independently selected from the group consisting of triethylsily l (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS).
  • TES triethylsilyl
  • TIPS triisopropylsilyl
  • TIPS tert-butyldimethyisilyl
  • TDPS ter -butyldiphenylsily3
  • activating the compound of formula XVI' in step a) includes contacting the compound of formula XVT with a silyl triflate reagent and a base.
  • a silyl triflate reagent is te t-butyldimethylsilyl triflate (TBSOTf) and the base is triethylamine.
  • the Lewis acid of step b) is a metal halide.
  • the metal halide is titanium tetrachloride (T1CI 4 ).
  • the activating step of step d) is conducted by treating the compound of formula XVHF or the compound of formula XIX' with a Lewis acid in the presence of an amine base at a low temperature.
  • the amine base is ⁇ , ⁇ -diisopropylethylamine and the low temperature is equal to or colder than ⁇ 50 °C.
  • R ! and R 2 are both tert-butyldimethylsilyl (TBS).
  • the epoxide-containing azaepothilone VII is ixabepilone
  • solution A was added dropwise into the XVII solution over 1 hour, then the resulting mixture was warmed to room temperature and stirred overnight. After completion by TLC, the reaction mixture was quenched with sat. aq. NH 4 C1. The aqueous layer was extracted with DCM (400 mL x2). The combined organic layers were dried over Na 2 S0 4 , filtered and evaporated. The residue was diluted with hexane (500 mL) and stirred overnight for precipitation.
  • reaction mixture was stirred at 22 °C for another hour and was quenched by adding sat. aq. NH4CI (1000 mL) and H 2 0 (800 mL). After layer separation, the organic layer was washed with H 2 0 (1000 mL *3), dried over Na 2 S0 4 for 4 hours, filtered, concentrated at 40-65 °C and co-evaporated with «-heptane (600 mL *2).
  • CDCI 3 CDCI 3 ) ⁇ 214.9, 170.1, 71.8, 65.6, 53.0, 52.7, 48.5, 47.8, 44.8, 40.5, 38.6, 33.1, 31.5, 26.6, 26.0, 20.9, 20.8, 20.6, 20.0, 18.2, 7.8, -4.1, -5.0.
  • the combined organic phase was washed with brine (500 mL *3), dried over Na?S0 4 , filtered and concentrated under reduced pressure.
  • the crude was analysed by HPLC showing a d.e. of 98.0%.
  • the crude was purified by column chromatography on silica gel
  • the aqueous layer was extracted by MTBE (400 mL) and the combined organic layers were washed with H 2 0 (800 mL) and concentrated to 200 mL.
  • the solvents were co-evaporated by w-heptane (500 mL *3) to 300 mL.
  • the resulted suspension was slowly cooled to 0 °C, stirred for 2 hours and filtered.
  • the solids were washed with «-heptane ( 170 mL) and dried under vacuum at 40 °C for 16 hours to give Xlla (172 g, yield: 92% from Xa in 2 steps, 93% HPLC purity, >99% tie.) as an off-white solid.
  • XlVax [0137] To a stirred solution of XlVax (1.57 g, 5.09 mmol) in acetone (35 mL) and water (25 mL) was added sequentially at 30 °C MO monohydrate (1.18 g, 8.73 mmol) and K 2 0s0 4 » 2H 2 0 (33.1 rng, 90 ⁇ ). The resulting mixture was stirred at 30 °C for 3 hours.
  • the osmate was deactivated by adding DMAP (275 mg, 2.25 mmol) at 30 °C and the mixture was stirred for another 30 minutes, followed by adding NaI0 4 (1.61 g, 7.53 mmol) to proceed the oxidative cleavage. After stirring for 1 hour at 30 °C, the resulting suspension was filtered and the filtrate was concentrated under reduced pressure to remove acetone. The residual aqueous solution was extracted with 2-Me-THF (30 mL. x2) and the combined organic layers were washed with 10% aq.
  • the combined organic extracts were washed with 20% aq. NaCl (900 mL), dried over MgS0 4 (20 g), filtered and concentrated to ca. 620 mL.
  • the solvent was swapped by MeOH (600 mL x3) to obtain the crude Ilax' suspended in MeOH (ca. 600 mL), which was heated to 65-70°C for dissolution.
  • the clear solution was gently cooled and kept at 57 °C for 0.5 hour before it was further cooled to 25 °C.
  • the resulting borane solution was transferred to a mixture containing compound Hie' (0.6 g, 1.28 mmol), (dppf)PdCl 2 (0.19 g, 0.256 mmol), AsPh 3 (0.078 g, 0.256 mmol) and Cs 2 C0 3 (1.25 g, 3 ,84 mmol) in DMF (10 mL).
  • the reaction mixture changed from orange red to dark brown solution.
  • IVbx (55 mg, 0.05 mmol) was dissolved in dry DCM (1 raL), then

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Abstract

The present invention relates to a novel process of making ixabepilone, ixabepilone derivatives and analogues, and intermediates thereof.

Description

PROCESS FOR IXABEPILONE, AND INTERMEDIATES THEREOF CROSS-REFERENCES TO RELATED APPLICATIONS
[0001] This application claims the benefit of priority to U. S. Provisional Patent Application No. 61/775,461 , filed March 08, 2013, and Chinese Patent Application No. 20141007761 1.6, filed March 4, 2014, each of which is incorporated by reference in its entirety.
STATEMENT AS TO RIGHTS TO INVENTIONS MADE UNDER FEDERALLY SPONSORED RESEARCH AND DEVELOPMENT
[0002] NOT APPLICABLE
REFERENCE TO A "SEQUENCE LISTING," A TABLE, OR A COMPUTER PROGRAM LISTING APPENDIX SUBMITTED ON A COMPACT DISK
[0003] NOT APPLICABLE
BACKGROUND OF THE INVENTION
[0004] Ixempra¾i (International non-propriety name (INN): ixabepilone) is an injectable antineoplastic agent belonging to the epothilone class. It is a synthetic derivative of the natural product epothilone B (a.k.a., EpoB), with the maero!ide ring oxygen atom replaced with a nitrogen atom to give the corresponding macrolactam. The chemical name of ixabepilone (a.k.a,, aza-EpoB, azaepothilone B and BMS-247550) is
{( 1.V.3.V 7.V.1 OR, 1 1X1 IS, 16K)-7.11 -dihydroxy-8,8, 10, 12, 16-pentamethyl-3-[(l£)-l - methyl-2-(2-methyl-4-thiazolyl)ethenyl)- 17~oxa-4-azabicycio[ 14.1.0]heptadecane-5,9- dione.
Figure imgf000003_0001
[0005] Ixabepilone is a white to off-white powder with a molecular formula of C27 H42N2O5S and a molecular weight of 506.70, Ixabepilone was developed by Bristol- Myers Squibb and was approved by the U.S. Food and Drug Administration (FDA) for the treatment of metastatic breast cancer on October 16, 2007. It is a cytotoxic microtubule stabilizer and the first member of the epothilone family of anticancer agents to be approved.
[0006] Analogues /·.'-· I: no C-lactam, Epo A- lactam, Epo F-lactam, Z-Epo C-lactam, Z- Epo D-lactam, /·.'··! ipo D-lactam of ixabepilone have also been reported (see J. Am. Chem. Soc. 2000, 122, 8890-8897). The C15 epimer (a.ka., 15-e ?;-aza-dEpoB, 15-ep -12,13- desoxy-1 5-azaepothilone B and 15-¾¾-15-azaepothilone D) of Z-Epo D-lactam has also been reported (Org. Lett. 2000, 2, 1637-1639).
Figure imgf000003_0002
Epo A-lactam: R = Me, R2 = H Z-Epo C-iaciam: R2 = H, Z-a!kene (C12,C13)
Epo F-lactam: R1 = CH2OH, R2 = Me Z-Epo D4actam: R2 = Me, Z-alkene (C12.C13)
£-Epo C-lactam: R2 = H, £-a!kene (C12,C13)
E-Epo D-lactam: R2 = Me, £-alkene (C 2,C13) [0007] U.S. Patent No. 6,605,599 (the '599 patent) describes two approaches for synthesizing azaepothilones such as ixabepilone. One synthetic strategy to prepare the azaepothilone is based on a ring-closing olefin metathesis (RCM) reaction to cyclise a linear amide compound into a macrocyclic lactam (a.ka., a macrolactam).
[0008] The '599 patent also discloses the preparation of amine derivatives 20 from aldehyde 18 (a commercially available compound) as shown in Scheme 1. Imine derivative 19 is treated with an allylating reagent such as aliylmagnesium bromide. The ' 599 patent, however, does not describe the preparation of a homochiral form of derivative 20, nor does R15 include any chiral auxiliary compounds.
Figure imgf000004_0001
Scheme 1 - Synthesis of amine derivative20 as per US 6,605,599
[0009] The '599 patent also discloses a method for azaepothilone synthesis from epothilones as shown in Scheme 2. Compounds 103 can be prepared from compounds 5 by reaction with a palladium complex followed by treatment with sodium azide.
Subsequent reduction of compounds 103 provides compounds 104. Finally, compounds 5 are obtained by macrolactamization of compounds 104. This procedure was used to prepare ixabepilone from the natural product epothilone B (a.k.a., EpoB, patupilone, EPO 906) in a step-wise approach in a 13-21% overall yield or a 23% overall yield in a one- pot, three-step protocol (J. Am. Chern. Soc. 2000, 122, 8890-8897),
Figure imgf000004_0002
Scheme 2 - Synthesis of azaepothilones from epothilones approach
[0010] U.S. Patent No. 6,365,749 discloses a process to produce ring opened epothilone derivatives 1 from epothilones 3 as shown in Scheme 3. The epothilone derivatives 3 can be treated with a palladium catalyst and nitrogen-based nucleophile to provide ring opened epothilone derivatives 1. When X is M the derivatives can be macrolactamized to produce azaepothilones.
Figure imgf000005_0001
[0011] U.S. Patent No. 6,518,421 discloses the conversion of epothilones into azaepothilones as shown in Scheme 4 comprising macro! actone ring opening of epothilones 3 to provide ammonium carboxvlate salts and subsequent macro lactamizati on to afford azaepothilones 2. This can be stepwise or in a single reaction vessel without isolation of the salt intermediate, and can be used to convert epothilone B to ixabepilone.
Figure imgf000005_0002
2
Scheme 4 - Conversion of epothilones to azaepothilones as per U.S. Patent No.
6,518,421
10012] A total synthesis method for the preparation of ixabepilone was disclosed in U.S. Patent No. 6,867,305 and J. Org. Chem. 2001, 66, 4369-4378. This approach comprises 5-alkyl Suzuki coupling of fragments Dl and a borane derivative of alkene D2 (Scheme 5). Dlb was coupled with borane derivative of aikene D2c in 78% yield using a Suzuki coupling, then converted to ixabepilone in a process requiring an additional 8 synthetic steps, including macrolactamization. The Suzuki coupling of the N-BOC amine derivative Ilia' or the azide derivative Dlb with D2a gave only 10% and 63% yields in the Suzuki reaction, respectively.
[0013] It was believed that the low yield in the coupling of Ilia' was due to the presence of the N-BOC (BOC is fert-butyloxycarbonyl; C02t-Bu; i-BuOCQ) carbamate group. This was seemingly supported when an improved 63% yield was obtained by substituting the N-BOC carbamate group of vinyl iodide Ilia' with an azide, as in azido vinyl iodide Dlb. However, in ail cases the arsenic-based ligand Asl¾ was used in the 5-alkyl Suzuki reaction. Arsenic is toxic, and the use of arsenic-based reagents is to be highly avoided in API manufacturing processes due to strict requirements on the levels of arsenic that are allowed in drug substances (< 2 ppm) for human consumption.
Accordingly, if arsenic-based reagents are used in the manufacture of an API, a significant (and costly) burden is placed on the manufacturer to control the level of arsenic to acceptable levels. It is therefore preferable to avoid the use of arsenic-based reagents in API manufacture.
OC, R2 ~ H
2 = Tree . R2 = Troc
Figure imgf000007_0001
Figure imgf000007_0002
D6
Scheme S - Synthesis of ixabepilone as per J. Org, Chesn, 2001, 66, 4369-4378
[0014] In view of the above, there remains a need for a process for the manufacture of ixabepilone and its derivatives that does not reply upon the use of epothilones, which are natural products, as starting materials. There is also a need for a process for the manufacture of ixabepilone that requires fewer chemical steps following formation of the complete acyclic precursor of ixabepilone as compared to the relevant art. 10015] The present invention relates to a novel process of making ixabepilone, ixabepilone derivatives and analogues, and intermediates thereof.
In one aspect of the present invention, a process for preparing a compound of formula I from three building blocks, Unit A, Unit B, and Unit C, is provided. I itself might be useful as a drug substance, or alternatively can be derivatised to provide other substances with useful drug properties.
Figure imgf000008_0001
Unit A is ketone XIX or its diastereomer XIX'
Unit A
Figure imgf000008_0002
Jnit B is aldehyde XX
Unit B
Figure imgf000008_0003
and
Unit C is amino vinyl iodide III (wherein X is I)
Unit C
Figure imgf000008_0004
[0017] Unit A, Unit B and Unit C are sequentially coupled together to give a compound of formula IV.
Figure imgf000009_0001
The compound of formula IV is converted to a compound of formula V.
Figure imgf000009_0002
The compound of formula V is then cyclised to give a macrolactam VI or I.
Figure imgf000009_0003
Compounds having formula I are optionally converted into ixabepilone, ixabepilone derivatives and analogues of ixabepilone respresented by formula VII.
Figure imgf000009_0004
10018] In another aspect of the present invention, a process is provided for preparing a compound of formula III' which is a useful building block that can be used for the first aspect of the present invention.
Figure imgf000010_0001
The process comprises converting the aldehyde of formula X
o
RA Y H
RB
into a chiral derivative of formula XI
Figure imgf000010_0002
that is stereoselectiveiy reacted with an allyiating reagent to give a compound of formula XII.
Figure imgf000010_0003
The compound of formula XII is converted into a compound of formula III'
Not applicable. [0020] The present invention provides novel processes for the industrial manufacture of ixabepilone, ixabepilone derivatives and analogues, and intermediates thereof. Salts and prodrugs of the compounds of this invention are also included. The ixabepilone, ixabepilone derivatives, and ixabepilone analogues of this invention are intended for the treatment of disease in humans. II. Definitions
[0021] As used herein, the term "azaepothilone" refers to a 16-membered polyketide- type lactam belonging to the epoihilone class.
[0022] As used herein, a macrolactam is a cyclic amide with 12 or more atoms comprising the ring. [0023] As used herein, the terms "aryl" and "aromatic ring," by themselves or as part of another substituent, refer to a polyunsaturated, hydrocarbon group which can be a single ring or multiple rings (up to three rings) which are fused together or linked covalently. Non-limiting examples of aryl groups include phenyl, naphthyl and biphenyl. "Substituted aryl" groups can be substituted with one or more groups selected from halo, hydroxy, amino, alkylamino, amido, acyl, nitro, cyano, and alkoxy.
[0024] "Heteroaryl" refers to a monocyclic or fused bicyclic or tricyclic aromatic ring assembly containing 5 to 16 ring atoms, where from 1 to 5 of the ring atoms are a heteroatom such as N, O or S. Additional heteroatoms can also be useful, including, but not limited to, B, Al, Si and P. The heteroatoms can also be oxidized, such as, but not limited to, -S(O)- and -S(0)2-. Heteroaryl groups can include any number of ring atoms, such as, 3 to 6, 4 to 6, 5 to 6, 3 to 8, 4 to 8, 5 to 8, 6 to 8, 3 to 9, 3 to 10, 3 to 11, or 3 to 12 ring members. Any suitable number of heteroatoms can be included in the heteroaryl groups, such as 1, 2, 3, 4, or 5, or 1 to 2, 1 to 3, 1 to 4, 1 to 5, 2 to 3, 2 to 4, 2 to 5, 3 to 4, or 3 to 5. The heteroaryl group can include groups such as pyrrole, pyridine, imidazole, pyrazole, triazoie, tetrazole, pyrazine, pyrimidine, pyridazine, triazine (1 ,2,3-, 1,2,4- and 1,3,5-isomers), thiophene, furan, thiazole, isothiazole, oxazole, and isooxazole. The heteroaryl groups can also be fused to aromatic ring systems, such as a phenyl ring, to form members including, but not limited to, benzopyrroles such as indole and isoindole, benzopyridmes such as quinoline and isoquinoline, benzopyrazine (quinoxaline), benzopyrimidine (quinazoline), benzopyridazmes such as phthalazme and einnoline, benzothiophene, and benzofuran. Other heteroaryl groups include heteroaryl rings linked by a bond, such as bipyridme. "Substituted heteroaryl" groups can be substituted with one or more groups selected from halo, hydroxy, ammo, alkyiamino, amido, acyl, nitro, cyano, and alkoxy.
[0025] The term "alkyl," by itself or as part of another substituent, means, unless otherwise stated, a straight or branched chain hydrocarbon radical. Alkyl substituents, as well as other hydrocarbon substituents, may contain number designators indicating the number of carbon atoms in the substituent (i.e., Ci~Cs means one to eight carbons), although such designators may be omitted. Unless otherwise specified, the alkyl groups of the present invention contain 1 to 10 carbon atoms. For example, an alkyl group can contain 1-2, 1-3, 1 -4, 1-5, 1-6, 1-7, 1-8, 1-9, 1- 10, 2-3, 2-4, 2-5, 2-6, 3-4, 3-5, 3-6, 4-5, 4- 6 or 5-6 carbon atoms. Examples of alkyl groups include methyl, ethyl, w-propyl, isopropyl, «-butyl, -butyl, isobutyl, sec-butyl, «-pentyl, w-hexyl, w-heptyl, «-octyl, and the like.
[0026] As used herein, the term "f!uoroalkyl" refers to alky] group containing one or more fluorine substituents. in some embodiments, fluoroalkyl refers to an alkyl group wherein all hydrogen atoms have been replaced with fluorine atoms. Examples of fluoralkyl include trifluoromethyl, 2,2,2-trifluoroethyl, and the like. [0027] As used herein, the term "alkenyl" refers to a straight chain or branched hydrocarbon having at least 2 carbon atoms and at least one double bond. Alkenyl can include any number of carbons, such as C2, C2-3, C2-4, C2-5, C2-6, C2-7, C2-8, C2-9, C2-1o, C3, C3.4, C3.5, C3.6, C4, C4 -5, C4-6, C5, C5-6, and C6. Alkenyl groups can have any suitable number of double bonds, including, but not limited to, 1, 2, 3, 4, 5 or more. Examples of alkenyl groups include, but are not limited to, vinyl (ethenyl), propenyl, isopropenyl, 1-butenyl, 2-buienyl, isobutenyl, butadienyl, 1-pentenyl, 2-pentenyl, isopentenyl,
1.3- pentadienyl, 1,4-pentadienyl, 1-hexenyl, 2-hexenyl, 3-hexenyl, 1,3-hexadienyl,
1.4- hexadienyl, 1,5-hexadienyl, 2,4-hexadienyl, or 1,3,5-hexatrienyl.
[0028] As used herein, the term "contacting" refers to the process of bringing into contact at least two distinct species such that they can react. It should be appreciated, however, that the resulting reaction product can be produced directly from a reaction between the added reagents or from an intermediate from one or more of the added reagents that can be produced in the reaction mixture. As used herein, the term "treating" refers to contacting a substance with at least one other substance. [0029] As used herein, the term "borane derivative" refers to a compound having at least one carbon-boron bond. Borane derivatives include, but are not limited to, boronic acids, alkyl boranes, alkenyi boranes, vinyl boranes. A borane derivative can be formed via reaction of a borane having a formula R2BH with a suitable parent molecule such as an alkene. A borane derivative can be isolated and purified before conversion to another compound, or it can be used in situ without isolation and purification.
[0030] As used herein, the term "borane" refers to a compounding containing a boron atom bound to three substituents. In some embodiments, the borane is an alkylborane containing one or more alkyl substituents. Examples of boranes include, but are not limited to, 9-borabicyclo-[3.3.1]nonane (9-BBN), 9-borabicyclo[3.3.1]nonane dimer (9- BBN dimer), disiamylborane, and dicyclohexylborane.
[0031] As used herein, the term "protecting group" refers to a moiety that is formed to render a functional moiety unreactive. Forming the moiety is referred to as "protecting" the functional moiety or the molecule that contains the functional moiety. The protecting group can be removed so as to restore the functional moiety to its original state.
Removing the protecting group is referred to as "deprotecting." Various protecting groups and protecting reagents, including hydroxy protecting groups, are well known to one of ordinary skill in the art and include compounds that are disclosed in Protective Groups in Organic Synthesis, 4th edition, T. W. Greene and P. G. M. Wuts, John Wiley & Sons, New York, 2006, which is incorporated herein by reference in its entirety. 10032] As used herein, the term "vinyl halide" refers to any alkene containing a halogen atom bound to one of the unsaturated carbon atoms in the alkene double bond.
10033] As used herein, the term transition metal refers to an element characterized by atoms having an incomplete d sub-shell or giving rise to cations having an incomplete d sub-shell. Examples of transition metals include Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Y, Zr, Nb, Mo, Tc, Ru, Rh, Pd, Ag, Cd, Hf, Ta, W, Re, Os, Ir Pt, Au, Hg, Rf, Db, Sg, Bh, Hs, Mt, Ds, Rg, Cn. Lanthanides and actinides can also serve as transition metals in the methods of the present invention.
[0034] As used herein, the term "transition metal catalyst" refers to a compound containing at least one transition metal that participates in a chemical reaction so as to change the rate of the reaction. In general, the transition metal catalyst increases the rate of the reaction and is itself not consumed during the course of the reaction. The transition metal catalyst can be in elemental form, such as palladium black, or the transition metal catalyst can be a coordination complex containing a transition metal bound to one or more iigands.
[0035] As used herein, the term "epoxide" refers to a three-membered ring containing one oxygen atom and two carbon atoms. In general, the epoxides of the present invention are formed by contacting a precursor such as an alkene with a suitable epoxidizing agent. Examples of epoxidizmg agent include, but are not limited to, peroxyacids such as peracetic acid and 3~chloroperbenzoic acid.
[0036] As used herein, the term "solvent" refers to a substance that is liquid at ambient temperature and pressure. Examples of solvents include water, acetone, toluene, methylene chloride, ethyl acetate, acetonitrile, tetrahydrofuran, benzene, chloroform, diethyl ether, dimethyl formamide, dimethyl sulfoxide, and petroleum ether. [0037] As used herein, the term "aliyl" refers to moiety having a formula: -CH2- CH=C¾.
[0038] As used herein, the term "halogen" refers to fluorine, chlorine, bromine, and iodine. The term "halide" refers to a compound containing a halogen or an anion originating from a parent halogen. 10039] As used herein, the term "benzophenone" refers to a ketone substituted with two benzene groups at the carbonyl carbon. "Benzophenone imine" refers to the imine that would result from the reaction of ammonia and benzophenone. "Benzophenone dialkyl acetal" refers to an acetal that would result from the reaction of benzophenone with two equivalents of an alkyl-alcohol. The benzophenone imines and benzophenone dialkyl acetals can also be obtained via other reactions.
[0040] As used herein, the term "activating" refers to increasing the reactivity of a functional group toward a desired reaction partner. Activating a functional group can include forming an intermediate that is more reactive toward the reaction partner than the parent functional group. In some embodiments, for example, activating a carbonyl- containing compound includes forming a silyl enol ether.
[0041] As used herein, the term "Lewis acid" refers to a compound that can accept an electron pair from a second compound, i.e., a Lewis base, to form an acid-base adduct. Examples of Lewis acids include, but are not limited to, metal halides such as titanium tetrachloride (T1CI4), zinc dichloride (ZnCl2), and tin di- and tetrachlorides (SnCl2 and
SnC ); boron trifluoride (BF3); aluminum and alkylaluminum halides (AIX3 and Κ.,ΛΙ Χ . n); and phosphorus and antimony pentafluorides (PF5 and SbFs).
[0042] As used herein, the term "base" refers to a molecule that is capable of accepting a proton (i.e., a hydrogen cation) to form a conjugate acid of the base. Examples of bases include, but are not limited to, Hunig's base (i.e., N,N-diisopropylethylamine), lutidines including 2,6-lutidine (i.e., 2,6-dimethylpyridine also sometimes referred to a lutidine), triethylamine, and pyridine.
[0043] As used herein, the term "diastereomers" refers to two or more stereoisomers of a compound that are not related to each other as mirror images (i.e. , not enantiomers). The term "diastereomeric ratio" refers to the ratio of one diastereomer to one or more other diastereomers in a mixture of diastereomers.
[0044] The term sultam refers to a cyclic sulfonamide compound in which the S-N chemical bond forms part of the ring. As used herein, the term sultam refers to the cyclic sulfonamides (l.Z?)-(+)-2,10-camphorsultam or (LS)-(-)-2, 10-camphorsultam, or derivatives of these compounds, otherwise known as camphorsultam or Oppolzers sultam, which are derived from camphor or the enantiomer of camphor. These sultam are used as chiral auxiliaries in the invention described herein.
ΙΠ. Description of the Embodiments
[0045] The synthetic approach to the macrolactam compounds of the invention involves the sequential coupling together of three starting materials (referred herein as units). The building blocks are the ketone referred to as Unit A, such as XIX or its diastereomer XIX', the aldehyde referred to as Unit B, XX, and the ammo vinyl iodide referred to as Unit C, such as III. These units are coupled to form linear, acyclic precursor molecules IV, referred to as Unit ABC. The linear, acyclic precursor compounds are chemically manipulated to remove protecting groups and then cyclised to give macrolactam compounds (i.e., VI and I) that themselves can be useful as therapeutic agents or can undergo further synthetic manipulations to produce other therapeutic agents, including the epoxide-containing macrolactam compound ixabepilone which is a known therapeutic agent, where necessary. This synthetic strategy is summarized in Scheme 6.
(XIX or XIX']
+ Unit C (III)
Optional, further lacrolactamization
synthetic
manipuiations
Expoxy macrolactam
Scheme 6 - Synthetic strategy as described herein
[0046] Unit A can be N-((35)-3-oxy-5-oxo-heptanoyl)-bornane-10,2-sultam XVIII or XVHF, or C3 hydroxy protected derivatives XIX or XIX'. In preferred embodiments, Unit A is the ketone XIX or its diastereomer XIX', wherein R1 is a silyl protecting group (such as triethylsilyl (TES), tnisopropyisilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS)), XIX can be prepared using methods known in the art (see for example Helv. Chim. Acta 2002, 85, 4086-41 10). In more preferred
embodiments, Unit A is the ketone XIX' wherein R' is a silyl protecting group (such as triethylsilyl (TES), triisopropyl silyl (TIPS), te/ -butyldimethylsilyl (TBS) and tert- butyldiphenylsilyl (TBDPS)). Ketone XIX' can be prepared using methods disclosed herein (Scheme 7). When Rf is the same protecting group in XIX and XIX', ketones XIX and XIX' are a diastereoisomeric pair of stereoisomers.
Figure imgf000018_0001
camp or
Figure imgf000018_0002
Scheme 7 - Synthesis of Unit A
[0047] In the art it is known that XIX can be prepared from XVIII by blocking the hydroxy! group C3-OH. It is known in the art (see Helv. Chim. Acta 2002, 85, 4086- 4110) that XVIII can be prepared by the treatment of commercially available sultam XVI with the Lewis acid diethylboron triflate, followed by treatment with
diethylisopropylamine, followed by cooling to -75 °C and reaction with aldehyde XVII. Diethylboron triflate is an expensive reagent. As described herein, new intermediates XIX', where R1 is a silyl protecting group, such as TES, TIPS, TBS or TBDPS, can be prepared using more cost efficient conditions. In this method, a mixture of aldehyde XVII and the Lewis acid TiCL at -78 °C in an organic solvent, preferably dry dichloromethane (DCM), is reacted with the enantiomer of XVI, namely N- acetylcamphorsultam (N-acetylbornane-10,2-sultam) XVI', that had been activated in an organic solvent, preferably dry DCM, by pre-treatment with a silyl triflate, such as TBSOTf (tert-butyldimethylsilyl triflate), in the presence of an amine base such as EtsN (triethylamine) or 2,6-!utidine. Other Lewis acids (such as BF3 etherate, lanthanide triflates (such as Yb(OTfb), transition metal triflates (such as Sc(OTf)3), magnesium(II) salts, zinc(ll) salts, other ΊΊ(ΙΥ) salts or TMSOTf (trimethylsilyl
trifluoromethanesulfonate)) are also known to be useful in similar Mukaiyama aldol reactions. When the Mukaiyama aldol reaction of activated XVI' with aldehyde XVII is complete an aqueous workup is conducted and then XVIII' can be isolated using methods known in the art. In contrast to that for other aldehydes, the reaction of aldehyde XVII with N-acetylcamphorsultam XVI provides the opposite stereochemistry of the chiral alcohol located at C3 of the heptanoyl chain. Therefore, to obtain the desired stereochemistry, the opposite enantiomer of the N-acetyl sultam X VI from that that would be anticipated must be used. That is, in the new method N-acetyl sultam XVI' is used.
[0048] Therefore, when using this alternative approach the product obtained, XVIII', is a diastereomer of compound X VIII, that would be obtained when applying the Lewis acid Bu2BOTf using known methods. The key chiral center at C3, which is present in the macro lactam products of this invention, is the same in both XVIII and XVffl' . XVTIP can be reacted with silylating agents such as triethylsilyl chloride (TESC1),
triisopropylsilyl chloride (TXPSG), tert-butyldimethylsilyl chloride (TBSCl), ten- butyldimet ylsilyl inflate (TBSOTf) or rerf-butyl½henylsilyl triflate (TBDPSOTf) to provide XIX' where R!= TES, TIPS, TBS or TBDPS, respectively. Both XIX and XIX' can be used as building blocks (i.e., Unit A) for the preparation of ixabepilone, ixabepilone analogues and intermediates thereof. As described herein, when synthesizing ixabepilone it is preferred that Unit A is the compound of formula XlXa' (N-((35)-3- (ter^butyidimethyl)silyioxy-5-oxo-heptanoyi)-bornane-10,2-sultam).
B. Reaction of Unit B with Unit A
[0049] Unit AB, II, is a composite of Unit A and Unit B and comprises a N-((3S)-3,7- dioxy-5-oxo-undec-l 0-enoyl)-bornane-l 0,2-sultam moiety. II can be the partially hydroxy-protected compounds XXII or XXII' or the fully hydroxy-protected compounds Ila or Ha'. The partially protected and fully protected compounds can all be used in the preparation of ixabepilone, the ixabepilone analogues, and the intermediates of this invention. Also as provided herein, it is more preferable to use fully protected compounds Ila or Ila', such as where R1= TBS and R TBS, when preparing ixabepilone, and it is further preferred to use Ilax' (where Rf== TBS and R2== TBS) than to use Ilax. The use of Ila' is more preferred than the use of Ha as the doubly TBS- protected compound Ilax' can be more readily isolated as a crystalline solid, making its purification more convenient, more efficient and less costly, on a manufacturing scale.
10050] Unit AB (II) can be prepared by the aldol reaction of ketone XIX or XIX' and aldehyde XX (Scheme 8). R" and R" are independently H (hydrogen) or a protecting group PG1 and PG2. The protecting groups are preferably silyl protecting groups, such as TES, TIPS, TBS or TBDPS for example. Examples of Unit AB are compounds of the formula XXII, XXII', Ha, or Ila'. Ila and Ila' are prepared by further protection of XXII and XXII'. In preferred embodiments R! is TBS and R2 is H or TBS, and Z can be sultam ST or its antipode sultam SI" and therefore in these preferred embodiments compounds Ila and Ila* are Ilax and Ilax', respectively. More preferably Unit AB is the compound of formula Ilax'.
Figure imgf000020_0001
PG3 = aiky! or siiyl
XXV: Z = OPG , R = PG' , R- XXVa: Z = OPQ-5, R 1 = PG 1 , R*
Scheme 8 - Synthesis of Unit AB (II)
[0051] In preferred embodiments a diastereoselective aldol reaction of Unit A and Unit B is used such that the major reaction Unit AB products, compounds of formula II (which is embodied as compounds of formula XXII and XXII'), possesses the requisite
7.V)- stereochemistry. More preferably the aldol reaction is the condensation reaction of ketone XlXa' and aldehyde XX and the major product is the compound of formula XXIIa'. Unit B is the aldehyde compound of formula XX. Aldehyde XX can be prepared using methods reported in the arts (see for example, Org. Lett. 2009, 77, 5326- 5328). Good stereoselectivity in the titanium enolate aldol reaction of ketone XIX, where R1 is TBS, with cc-methyl aldehydes has been reported (for example, see Org. Lett. 2002, 4, 3811-3814; J. Org. Chem. 2004, 69, 9269-9284), Stereo selection (which are reported as diastereomeric ratios (d.r.)) for the (6/?,75)-diastereomer over the (6S R)- diastereomer with d.r. of as high as 10: 1 to 20: 1 have been reported (see Org. Lett. 2002, 4, 381 1-3814; J. Org. Chem. 2004, 69, 9269-9284) for the titanium enolate aldol reaction of ketone XIX, where R1 is TBS with cc-methyl aldehyde XXIIla and XXlIIb. oc-Methyl aldehydes XXIQa and XXIIIb have been proposed to be intermediates for the synthesis of epothilone B and D. The use of these titanium enolate aldol reaction, however, for the coupling of suitani-containing ketones XIX or XIX', with aldehyde XX has not been reported for the preparation of intermediates useful in azaepothilone synthesis.
Figure imgf000021_0001
[0052] The diastereoselective titanium- enolate aldol reaction of ketones XIX or XIX' and aldehyde XX as described herein can be conducted using reaction conditions reported in the arts for titanium-enolate aldol reaction of ketones and aldehydes. The ketone XIX or XIX' is activated by treatment with a titanium-based Lewis acid such as TiCl4 or TiBr4, preferably TiCl4, at a low temperature, preferably colder than -50 °C more preferably colder than -70 °C and most preferably between about -70 to -78 °C, in an organic solvent preferably DCM, followed by addition of an amine base, such as DIPEA (AyV-diisopropylethylamine; Hunig's base), Et3N, B133N, preferably DIPEA. Following activation of the ketone, the aldehyde is added to the activated ketone mixture that is maintained at a low temperature, preferably colder than -50 °C, more preferably colder than -70 °C, and most preferably between about -73 to -78 °C. The aldehyde XX is added either neat (no solvent) or in an organic solvent such as DCM, pentane, hexanes, petroleum ether, or n-heptane, or in a mixture of organic solvents, such as DCM and n- heptane. Some solvents, including THF (tetrahydrofuran), when present at high enough levels can inhibit the aldol reaction of XIX or XIX' and XX i this invention and therefore should be avoided. The molar equivalents of aldehyde XX can be varied with respect to ketone XIX or XIX', however, it has now been found that at least 1.5 molar equivalents of aldehyde XX should be used, and more preferably more than 3 molar equivalents of aldehyde XX should be used to allow good conversion of the ketone XIX or XIX' to the product XXII and XXII'. Most preferably about 4 molar equivalents of aldehyde XX are used to ensure good chemical conversion of ketones XIX or XIX' to XXII or XXII', respectively. Following addition of the aldehyde, the reaction mixture can be held at a low temperature (between about -70 to -78 °C) for a period of time, or allowed to warm up to about 0 °C before reaction workup to isolate the product XXII and XXII'.
[0053] The diastereoselective titanium-enolate aldol reaction of XIX or XIX' and XX in this invention provides different diastereomenc ratios (d.r.) of the products XXII or XXII', respectively (Scheme 9). For example, the aldol reaction of XlXa and XX provides XXIIa with a d.r. of the (6i?,75)-diastereomer / (6,S',7i¾)-diastereomer of about 91 : 9, up to about 95:5, whereas the aldol reaction of XlXa' and XX provides XXIIa' with a d.r. of the (6i?,75)-diastereomer /' (65',7i?)-diastereomer of about 84 : 16, up to about 86: 14.
Figure imgf000022_0001
two major diastereomers
aidol reaetiosi of XIX or XIX' asid XX 10054] In preferred embodiment, the isolated XXIIa' (which is the compound of formula XXII' where R! is TBS and R2 is H) does not require purification and can be used in the next reaction step to provide Ilax' (which is the compound of formula Ila' where RJ is TBS and R" is TBS). The compound of formula Ila', where R2 is a silyl protecting group, is prepared by silylation of XXIIa' under reaction conditions known in the arts for the silylation of secondaiy alcohols. In preferred embodiments the compound of formula XXIIa' is silyiated by its reaction with TBSOTf (tert-butyldimethylsilyl triflate) in an organic solvent, preferably diy DCM, in the presence of a base, such as 2,6- lutidine or imidazole, more preferably 2,6-lutidine. [0055] In embodiments where Ilax is required, it is preferred that its precursor XXIIa is purified by crystallisation or by column chromatography prior to its silylation such that the unwanted (65',7i?)-diastereomer of XXIIa can be removed. Purification of XXIIa by crystallisation can be achieved using a mixture of MeOH (methanol) and water.
Purification of XXIIa by column chromatography to remove the unwanted (6S,7R)- diastereomer of XXIIa (leaving the d.r. of the isolated XXIIa at about 99: 1) insures that Ilax of high chiral purity can be obtained, . . The compound of formula Ila, can be purified by methods known in the art such as column chromatography. Ilax of this invention can be obtained with a d.r. of about 99: 1 when its precursor XXIIa is purified by column chromatography as just described. [0056] In some preferred embodiments the solid compound Ilax', is purified by recrystallisation from organic solvents including MeOH. Recrystallisation of crude Ilax' from MeOH provides Ilax' with a high chemical and chiral purity. The d.r. of the (6i?,7i )-diastereomer / (65,7A3)-diastereomer of reerystaliised Ilax' is greater than or equal to 99 : 1. Multiple recrystallisation can provide an even higher d.r. of the (6i?,75)- diastereomer / (6<$,7/?)-diastereomer of reerystaliised Ilax'. Thus although both Ilax and Ilax' can be used in this invention for the manufacture of ixabepilone or its analogues and derivatives, Ilax' is preferred due to its high chiral purity, and its convenience in manufacturing.
[0057] Consideration of the d.r. values for XXII or XXII' produced by the titanium- enolate aldol reaction of XIX or XIX' and XX, respectively, would suggest that XIX is the better building block, as opposed to XIX', for the manufacture of ixabepilone. Two unexpected factors, however, reveal that XIX' is more suitable than XIX for the manufacture of ixabepilone using the methods described herein. Firstly, while the natural product (+)-camphor, used in the chiral intermediates is an oil, XXII' and Ilax' are both solid compounds. That is, while the compound Ilax derived from the natural product (+)-camphor is an oil, the two of compounds {i.e., XXII' and Ilax') derived from the unnatural enantiomer of (+)-camphor, are solids. The consequence of this difference in physical property of the diastereomeric compounds is that the manufacture of Ilax' is more efficient than that of Ilax. In fact, in preferred embodiments Ilax' can be prepared with a greater than or equal to 99: 1 diastereomeric ratio of the (6i?,75)-diastereomer /
(65',7i?)-diastereomer and high chemical purity in greater than 60% overall yield from the coupling of XlXa' and XX followed by silylation and crystallisation, without the need for chromatographic purification. High chemical purity and diastereomeric purity of Ilax' is readily achieved by crystallisation of Ilax' from methanol. By contrast, Ilax is produced in an oily physical form and the unwanted (6<S,7i?)-diastereorners must be removed by column chromatography. Therefore, in the manufacture of ixabepilone as described herein it is preferred that XIX' , XXII' and Ilax' are used as intermediates rather than the corresponding diastereomers XIX, XXII and Ilax. Still other advantages, described below, are that the hydrolysis of the sultam- containing intermediate IVax', derived from Ilax', provides XXVIax in higher yield than does the hydrolysis of the corresponding sultam-containing intermediate IVax, which is a diastereomer of IVax', and which is derived from Ilax.
[0058] The sultam group (Z is sultam ST or sultam ST') of the compounds of formula II (Unit AB) can be removed and changed to oxygen-based groups such as alkyl esters or silyl esters. This can be achieved by hydrolysis of the amide bond of the compound of formula Ila or Ha' using methods known in the art (such as hydrolysis using LiOH or NaOH and H202, for example) to provide carboxylic acid derivatives of II, such as
XXIVa, which are then estenfied to provide esters (Scheme 8), such as XXVa, using methods known in the art. These esters can be used to prepare ixabepilone and its derivatives and analogues. C, Preparation of Unit C
[0059] Unit C is represented by the generic formula III (Scheme 10). RA is an unsubstituted or substituted aryl group or an unsubstituted or substituted heteroaryl group, and is preferably the radical 2-methyl-thiazol-4-yl. RB and Rc are independently alkyl, fluoroalkyl, an unsubstituted or substituted aryl group or an unsubstituted or substituted heteroaryl group, and are both preferably methyl. X is a halogen selected from the group I, Br and CI, or a non-halogen such as inflate (OSO2CF3) or phosphate (OPO(OR)2), and is preferably I. R3 and R4 are independently hydrogen (H) or a protecting group. In preferred embodiments for the preparation of macrolactam compounds of this invention III is compounds of the formula III', and in the preferred embodiments useful for the synthesis of ixabepilone, III is Ilia'. Ill can also be Illb', IIId\ iIIe', and nic'.
[0060] Compound Ilia' (see Scheme 11) can be prepared by known methods.
Unfortunately the reported methods (see two methods reported in J. Org, Chem. 2001, 66, 4369-4378) for the synthesis of Ilia require long synthetic pathways and are low- yielding. There therefore exists a need for new and more efficient routes that can be conducted on manufacturing scales. In this invention, III, embodied as Illb', Ilia', Hid', Hie', and ΙΙΙε', is prepared using novel methods that include the 1,2-addition of an allylating reagent AL to the C-N double bond of chiral N-sulfinyl irnines XI as a key reaction step to provide chiral N-sulfxnyl amines XII (Scheme 10) with high stereo purity. N-Sulfinyl imines XI can be prepared from α,β-unsaturated aldehydes X by condensation with te -butanesulfinamide using conditions such as those provided in Chem. Rev., 2010, 110, 3600-3740 or using methods described herein. For example, Xa can be reacted with ( ?)-(+)-N-fe7 -bu†anesu3fmamide in dry solvents, preferably in dry toluene, in the presence of activating agents such as Ti(0/-Pr) , Ti(OEt)4, MgS04, CsC03 or HSO4, most preferably in the presence of KHS04, at room temperature for several hours followed by aqueous workup and concentration under vacuum to provide XIa. In the subsequent reaction step, the atom M of the allylating reagent AL can be a metal or a metalloid useful in 1,2-additions to C-N double bonds including Mg, Zn, In, Li, Sn, Ce, AS, B, lanthanides or Si. Magnesium is more preferred due to high stereoselectivities (> 98% d.e. (diastereomeric excess)) that can be obtained in the 1 ,2-addition reaction.
When M is a metal such as Zn, metal salts such as InCl3 and In(OTf)3 can be added to the reaction mixture. The value of n in the formula AL can be 1, 2, 3 or 4, but preferably is 1. For example, a solution in a dry organic solvent such as DCM, diethyl ether, THF or 2-Me-THF (2-methyltetrahydrofuran), more preferably a solution in dry DCM or dry 2- Me-THF, of XIa can be reacted with allyl magnesium bromide, ALa, in diethyl ether or in 2-Me-THF, more preferably in 2-Me-THF, at about <-40 °C. Although allyl magnesium bromide in diethyl ether is commercially available, improved
stereoselectivity in the conversion of XIa to Xlla can be achieved in this reaction when allyl magnesium bromide is prepared in 2-Me-THF. It is therefore preferred that allyl magnesium bromide in 2-Me-THF is used in this reaction. Once the 1,2-addition reaction of the allylating reagent and inline derivative XI is complete, the product mixture can be treated with a mild aqueous acid, such as saturated aqueous ammonium chloride, at about -20 °C followed by warming to room temperature. Following an aqueous workup, Xlla can be isolated, and optionally purified by methods known in the arts including precipitation or column chromatography. In the preferred embodiments of this invention, Xlla can be isolated with a high chemical purity and a high diastereomeric purity (d.e.), such as >99% d.e., as a solid compound by precipitating it from a solution of MTBE (methyl tert-butyl ether) and «-heptane. Additionally, allyl derivatives of metalloids, such as boron and silicon, might be useful on their own or in the presence of activating agents such as Lewis acids, such as TMSOTf, Ti(IV) and Al(III) salts, or TBAF (tetra-JV- butylammonium fluoride) or MeLi, as replacements for the allylating reagent AL.
Figure imgf000026_0001
Scheme 10 - Synthesis of Unit C (ΠΓ)
[0061] In one embodiment of the invention, the allylating reagent AL is allyl magnesium bromide (ALa), III is any of Ifflb', Ilia', ΙΪΜ', Hie', or Hie' (Scheme 1 1), and is preferably lilfo'. Ilia', or Illd', more preferably Illb' or Ilia', and most preferably Ilia'. All of these compounds can be prepared from the commercially available compound Xa, using methods disclosed herein. Ilia' is useful for the manufacture of ixabepilone and its derivatives and analogues using methods described herein.
Figure imgf000027_0001
Scheme 11 - Synthesis of IIIa-e
10062] The conversion of XII to compounds of the general formula ill of this invention can be accomplished in several ways (Scheme 12). For example, removal of the suifinyi chiral auxiliary of XII using a strong acid provides aliyl amine XIII that can be obtained as a free base or as a salt (such as a HQ, p-toluenesulfonic acid,
camphorsulfonic acid, citric acid or (]_,)-(+)- or (D)-(-)-tartaric acid salt). Protection of the nitrogen atom of the free base or salt forms of XIII provides XIV. XIV can then be homologated via a one-pot, two-step oxidation and Wittig reaction (see J. Am. Chem. Soc. 2000, 122, 10521-10532), to provide the vinyl halides III.
C, X
I
2, X X = I ,f-Bu
Figure imgf000028_0001
Scheme 12 - Conversion of XII to Illa-e
[0063] For example, treatment of Xlla in an organic solvent such as MeOH or 1 ,4- dioxane, preferably MeOH, with a solution of HC1 in an ether solvent such as diethyl ether or 1,4-dioxane, preferably in diethyl ether, at room temperature, provides an organic solvent solution of the hydrochloride salt (HC1) of ally! amine Xllla. Neutralization of the hydrochloride salt of ally! amine Xllla can be conducted with a base, such as aqueous NaOH, to provide ally! amine Xllla that can be used without further purification in the subsequent reaction step, or alternatively it can be purified such as by column chromatography. Alternatively, treatment of Xlla in MeOH with concentrated aqueous HC1 at about room temperature provides the hydrochloride salt (HCi) of ally! amine Xllla, which is then extracted into water, mixed with an organic solvent, such as MTBE, and treated with 10% aqueous NaOH until the pH increases to about 10-11. Washing of the organic phase with water and brine provides an organic solution which is then concentrated under reduced pressure to provide allyl amine Xllla with good chemical purity. The allyl amine Xllla can be converted to its N-tert-butoxycarbonyl (iV-BOC) protected derivative XlVax by treatment with di-ferf-butyl dicarbonate (also known as BOC anhydride or BOC20) in an organic solvent such as THF, 2-Me-THF or DCM, preferably DCM, opti onally in the presence of a base, such as Et3N. Preferably Xllla in DCM is reacted with di-fert-butyl dicarbonate in the absence of a base and following completion of the reaction the product mixture is concentrated and XlVax is precipitated in high yield and high chemical purity by the addition of «-heptane.
10064] In one embodiment, the olefin XIV can be converted to aldehyde XV by a one- pot/two-step dihydroxylation and oxidation reaction sequence without isolation of the dihydroxylated reaction intermediate XXI. This sequence involves the dihydroxylation of the double bond of XIV using a first oxidant to provide dihydroxy compound XXI. The first oxidation can be an oxidant such as H202, i-BuOOH, DMDO
(dimethyldioxirane), TM-CPBA (/wet -chloroperoxybenzoic acid) or metallic conditions such as using catalytic or stoichiometric amount of Rh, Ru, Pt, Pd, Cu, Ce or Os salts in combination with other oxidants such as periodates or peroxides in the presence or in the absence of ligands in one step, and is preferably a combination of a catalytic amount of an osmate reagent and 4-methylmorpholine N-oxide using solvents such as water, ketones, alcohols, ethers, nitriles or ionic liquids or any combination of these but more preferably a mixture of acetone and water. When the reaction is deemed to have reached a satisfactory level of completion, as determined by analytical techniques such as HPLC analysis, an agent is added to the product mixture that retards or deactivates the oxidative ability of the osmium salt This deactivating agent is preferably a Lewis base, such as pyridine or a pyridine derivative such as NN-dimethyl-4-aminopyridine (DMAP). This deactivation is necessary to inhibit oxidation of the remaining double bond in the second reaction step (i.e., in the conversion of dihydroxy compound XXI to aldehyde XV).
Following addition of the deactivating agent, a second oxidant is added to the mixture, without isolation of the dihydroxy compound XXI, to effect conversion of the
dihydroxylated intermediate XXI to aldehyde XV. The second oxidant can be NaI04, HI04, PbI(OAc)2 or Pb(OAc)4, and is preferably NaI04 using solvents such as water, ethers, dioxane, nitriles, EtOAc (ethyl acetate) or chlorinated hydrocarbons but more preferably a mixture of acetone and water. This reaction sequence provides an advantage on manufacturing scale because the dihydroxy intermediate XXI does not require isolation, but instead can be directly converted into aldehyde XV in the same reaction vessel using the same solvents upon addition of the second oxidant. 10065] In another embodiment of the conversion of olefin XIV to aldehyde XV, dihydroxylation of the double bond of XIV is accomplished using an oxidant to provide dihydroxy compound XXI. The oxidant can be an oxidant such as H202, t-BuOOH, DMDO, «ί-CPBA or metallic reagents such as a catalytic or stoichiometric amount of Rh, Ru, Pt, Pd, Cu, Ce or Os salts in combination with other oxidants such as periodates or peroxides in the presence or in the absence of ligands, and is preferably a combination of a catalytic amount of an osmate reagent and 4-methylmorpholine N-oxide in the presence of (DHQ)2PHAL using solvents such as a mixture of THF and water. The dihydroxy compound XXI is then isolated and purified using techniques known in the arts such as crystallisation or chromatography. The purified dihydroxy compound XXI is then oxidized to provide aldehyde XV using an oxidant. The oxidant can be NaI04, HTO4, PbI(OAc)2 or Pb(OAc)4, and is preferably NaI04 using solvents such as water, ethers, dioxane, nitriles, EtOAc or chlorinated hydrocarbons but more preferably a mixture of THF and water. [0066] The conversion of the compound of formula XV to the compound of formula III is achieved by a Wittig reaction using the ylide generated from (1- iodoethyl)triphenylphosphonium iodide. (l-Iodoethyl)triphenylphosphonium iodide can be prepared from (ethyl)triphenylphosphonium iodide as described in J Am. Chem. Soc. 2000, 122, 10521-10532, however, on multigram scales or larger scales, it has now been found that it is best that (l-iodoethyl)triphenylphosphonium iodide is isolated and purified prior to its use (Org. Lett. 2008, 10, 1353-1356). This contrasts with methods known in the art (such as J. Am. Chem. Soc. 2000, 122, 10521-10532) where (1- iodoethyl)triphenylphosphonium iodide is generated in situ and used directly in the next reaction step without its isolation. Thus, in preferred embodiments dry
(ethyl)triphenylphosphonium iodide is deprotonated with a strong base, such a n-BuLi, in an organic solvent, such as THF or 2-Me-THF, at a temperature lower than ambient temperature, preferably about 0 to 10 °C. After warming up to ambient temperature the deprotonated intermediate is then cooled to about -50 to -60 °C and is iodmated with an lodmatmg agent such as iodine. After warming up to ambient temperature the thus formed crude (l-iodoethyl)triphenylphosphonium iodide is isolated from the reaction slurry by filtration. Purification of the crude (l-iodoethyl)triphenylphosphonium iodide is preferred because it provides better efficiency in the subsequent reaction step.
Purification of the crude (l-iodoethyl)triphenylphosphonium iodide can be achieved by- stirring a slurry of the crude (l-iodoethyl)triphenylphosphonium iodide in an organic solvent for a sufficient period of time and then filtering. The organic solvent is one that preferentially can dissolve the impurities whilst not substantially dissolving (1- iodoethyl)triphenylphosphonium iodide. Preferred solvents include DCM or MeCN (acetonitnle). This slurry process effects the removal of certain impurities, such as unreacted (ethyl)triphenylphosphonium iodide, that can otherwise lead to impurity formation in the next reaction step. It is more preferred that this slurry purification is conducted in DCM because it has a low boiling point and is readily removed from the purified (l-iodoethyl)triphenylphosphonium iodide upon drying of the isolated solid.
[0067] Purified (l-iodoethyl)triphenylphosphonium iodide is dried using techniques known in the art, preferably in a vacuum oven, to remove any inadvertently absorbed moisture. The dried reagent is then mixed with an organic solvent, such as THF, 2-Me- THF, MeCN or toluene or a combination of 2-Me-THF with TPPA
(tripyrrolidinophosphoric acid triamide), DMSO (dimethyl sulfoxide), DME (1,2- dimethoxy ethane), diglyme, NMP (N-methyl-2-pyrrolidone), TMEDA (Ν,Ν,Ν',Ν '- tetramethylethylenediamine) or DMAc (dimethylacetamide), and reacted with a strong base, such as LiHMDS (lithium bis(trimethylsilyl)amide), NaHMDS (sodium
bis(trimethylsilyl)anude), KHMDS (potassium bis(trimethylsilyl)amide) or «-BuLi («- butyl lithium), at a temperature less than ambient temperature, such as at or below about -20 °C. Following deprotonation of the (l-iodoethyl)triphenylphosphonium iodide with the strong base, the reaction temperature is lowered further, such as to about - 50 °C or below, and the aldehyde XV, preferably dissolved in an organic solvent such as THF or 2-Me-THF, is added. Following completion of the reaction, a workup is conducted and III is isolated and preferably purified. When HI is a solid, it is preferably purified by cry stallisation. When HI is a non-solid compound, such as is Ilia, it is preferably purified by column chromatography.
[0068] When the protecting group R4 is tert- butyloxy car bony 1 (BOC; t-BOC; Boc), R3 is H, RA is a 2-methyl-thiazol-4-yl group and RB and Ru is methyl and X is I, the generic formula III (Unit C) is the compound of formula Ilia'. The compound of formula Ilia' is useful for the manufacture of ixabepilone. Deprotection of R4 of Ilia', using methods disclosed herein, provides ally! amine Illb' which can be isolated in its free base form or as a salt (where HX is a Bransted acid, H is a proton and X is a conjugate base, such as HC1 for example in the compound of formula IIIb*HG). Ally! amine Illb' can be used for the manufacture of ixabepilone. Alternatively, allyl amine Illb' can be reacted with benzophenone in the presence of a catalyst to provide benzophenone imine Hie'.
Alternatively, further BOC protection of Ilia', using methods disclosed herein, including deprotonation of Ilia' with a base such as NaHMDS and reacting the deprotonated form of Ilia' with άϊ-tert- butyl di carbonate, provides bis-BOC protected vinyl halide Hid'. Bis-BOC protected vinyl halide Hid' can be used for the manufacture of ixabepilone. Alternatively, oxidation of both the sulfur atom and double bond of XII, using methods disclosed herein, provides aldehyde XVb' that can then be homologated via a two-step oxidation and Wittig reaction sequence, to provide the vinyl halide Hie' when R4 is H, RB is methyl (Me) and RA is a 2-methyl-thiazol-4-yl group.
D, Preparation of acyclic precursor ABC
[0069] The acyclic precursor of ixabepilone and ixabepilone analogues of this invention, IV, are prepared by coupling of borane derivatives of alkenes II (Unit AB) with vinyl halides III (Unit C) by use of a carbon-carbon coupling reaction, such as a B- alkyl Suzuki reaction (Scheme 13). The U-alkyl Suzuki reaction is a metal catalysed carbon-carbon bond forming reaction. The borane derivatives, also known as alkyl boranes, of the alkene II that are used in the i?-alkyl Suzuki reaction can be prepared by the reaction of the alkene with a borane including 9-borabicyclo-[3.3.1 Jnonane (9-BBN), 9-borabicyclo[3.3.1]nonane dimer (9-BBN dimer), disiamylborane, dicyclohexylborane, or other borane derivatives, using methods in the known art. 9-BBN, or its dimer, is the most preferred borane for hydroboration of Ha or Ila' that is useful in the coupling of Ha or Ila' and Ilia. The alkyl boranes produced upon hydroboration of Ila or Ha' can be used directly in the Suzuki reaction without the isolation or purification. The Z?-alkyl Suzuki reaction is well known in the arts (for example, see J Am. Chem. Soc. 1989, I II, 31 -321 and Chem. Rev. 1995, 95, 2457-2483). When the Suzuki reaction or the if-alkyl Suzuki reaction of alkenes II are employed according to the methods of the invention, the alkenes are first converted to their borane derivatives prior to the palladium-catalysed coupling step.
Figure imgf000033_0001
Scheme 13 - Synthesis of acyclic precursor ABC
[0070] In one embodiment of the invention, III is any of IHb, Ilia, Hid, Die, or IIIc, and is preferably Illb, Ilia, or Did, more preferably DIb or Ilia, and most preferably Ilia, and this is coupled in the Suzuki reaction with a borane derivative of the alkene compounds XXII, XXII', Da or Da', most preferably a 9-BBN derivative of Da', to give IV (Scheme 14). Preferably, R3 and R4 are H or BOC, while more preferably R3 is H and R is BOC. R and R are H or protecting groups, preferably silyl protecting groups including TES, TIPS, TBS and TBDPS, most preferably TBS. For the manufacture of ixabepilone, Da' is more preferred than Da as the sultam group ST' of Da' can be removed more efficiently to provide carboxylic acid XXVIa than the sultam group ST of Da. Most preferably, for the manufacture of ixabepilone, Dax' is coupled with IDa' giving IV where Z is sultam ST', R' and " is TBS, R' is H and R4 is BOC and RA is 2- methyl-thiazol-4-yl, R J and "" is methyl.
[0071] The Suzuki reaction of the N-BOC amine derivative Ilia with the borane derivative of the olefin D2a was previously reported (J. Org. Ghent. 2001, 66, 4369- 4378) to give a 10% yield of D3a (see Scheme 5). In that report a low yield in the coupling of Ilia was obtained and thought to be due to the presence of the N-BOC carbamate group. An improved 63% yield was obtained upon substituting the N-BOC carbamate group of the vinyl iodide with an azide group. Surprisingly, as provided herein, the N-BOC amine derivative IDa could be very efficiently coupled with the 9- ΒΒΝ hydroborated derivatives of Da or Da'. In fact, isolated yields of IVax and IVax' (i.e., IV where R1 is R2 is TBS, Z is sultam ST or sultam ST', R3 is H, R4 is BOC) of >90% can be obtained using the present methods. Moreover, an arsenic-based iigand, triphenylarsine (AsPh3) (as reported for the Suzuki reaction examples in J. Org. Chem. 2001, 66, 4369-4378), was not required in the coupling of N-BOC amine derivative Ilia with the 9-BBN hydroborated derivatives of Ila or Ila' as described herein. In short, a process has now been found wherein 9-BBN hydroborated derivatives of Ila or Ila' can be coupled with N-BOC amine derivative Ilia giving a high yield (>90-98%) of IV without the need of azide derivatives, and without the need for an arsenic-based gand (AsPh3). For example, coupling of 1.3 molar equivalents of the 9-ΒΒΝ hydroborated derivative of Ilax' with Ilia' in the presence of 5 mol % of [Ι,Γ- bis(diphenylphosphino)ferrocene]dichloropalladium(II) (Pd(dppf)Cl2) without any additional phosphorous or arsenic-based ligands, and 3 molar equivalents of Cs2C03 in N^N-dimethylformamide (DMF) at 50 °C provided up to a 98% isolated yield (following column chromatography) of Wax or IVax' after only 1 hour of reaction. [0072] In addition to the Suzuki reaction of 9-ΒΒΝ hydroborated derivatives of Ha and with Ila', it has also been found that the partially protected analogues ΧΧΠ and XXII' could be coupled with N-BOC amine deri vative Ilia. Although the use of partially protected analogues provi de the advantage of not requiring an additi onally protection step, the lack of protection of C7-hydroxyl group allows a retro-aldol reaction to occur that produces impurities and lowers the conversion yield. Therefore it is most preferred that both hydroxy! groups (i.e., C3~ and C7-hydroxyl groups) are protected (that is, the use of Ha or Ila' in the Suzuki coupling step is preferred to the use of XXII or XXII'). Fully unprotected analogues (i.e., where both the C3- and C7-hydroxyl groups are not protected) are not preferred due to considerable levels of retro-aldol reaction occurring in the iJ-alkyl Suzuki reaction leading to low yields and impurity formation.
10073] In addition to using the N-BOC amine derivative Ilia in the Suzuki reaction, other protected and unprotected amine analogues can be used. The unprotected free amine HIb or its salt IIIb«HCl can be coupled with II (such as Ila or Ila') to provide IV where R:' is R4 and R is H, but preferably the coupling is conducted in the presence of di-fcrt-butyl dicarbonate ((BOC)20) which provides the N-BOC derivative of the product (i.e., IV where R3 is H and is BOC) or a mixture of this and IV where R3 is R4 is H. Illd, Hie, and IIIc can all be coupled with II using the Suzuki reaction to provide IV.
2
Figure imgf000035_0001
Scheme 14 - Synthesis of intermediates IVax and lVax' for synthesis of
azaepothilones including ixa
[0074] The acyclic precursor with the formula IV is then converted to the acyclic precursor ammo acid compound of formula V by removal of the Z group and the nitrogen protecting groups R3 and R4 (when R3 is not H) (Scheme 15). The removal of the Z group and protecting groups R3 and R4 (when R3 is not H) can be conducted in either order (i.e., the Z group can be removed prior to R3 and R4 (when R3 is not H) or vice versa) to provide intermediate XXVI. In embodiments where the Z group is an alkyl ester such as a ten-butyl ester or a silyl ester such as 2-(trimethylsilyl)ethoxymethyl (SEM), and R" (and R3 if it is not H) is a Bransted and/or Lewis acid sensitive protecting group such as BOC, the Z group is optionally removed simultaneously with the removal of R4 (and R3 if it is not H) using ! irons led acids such as trifluoroaeetie acid (TEA) or Lewis acids such as trimethyisilyl trifluoromethanesulfonate (TMSOTf). Optionally, where the Z group is an alkyl ester such as a te/ -butyl ester or a silyl ester such as SEM, it can be simultaneously removed during deprotection of R1 and R2 when R1 and R2 are silyl protecting groups such as TES, TIPS, TBS or TBDPS. In another embodiment, proceeding removal of the Z group, protecting groups R1 and R2 can be removed at the same time as R4 (and R3 if it is not H) such that the amino acid IX wherein Rs and R2 are H is obtained, which is a fully unprotected intermediate useful for the synthesis of azaepothilones such as ixabepilone.
[0075] The linear ammo acids V are then cyclised by macrolactamization reactions to provide macrolactanis VI using methods known in the art. A macrolactamization reaction is the formation of a large cyclic amide from a linear amino acid or an amino acid derivative such as an ammo ester. Deprotection of the protecting groups R! and R2 of macrolactanis VI then provides azaepothilones I. In the embodiment where R1 and R2 are H in IX, macrolactamization of IX directly provides azaepothilones I. Optionally, macrolactanis I are then converted into the epoxide containing azaepothilones by epoxidation using known methods.
Figure imgf000036_0001
VII VI: R' = H or PG1 , R2 - H or PG2
Figure imgf000036_0002
VIII: R1 = H or PG' , R2 = H or PG2
Scheme 15 - Synthesis of azaepothilones from acyclic precursor ABC
[0076] In some embodiments, R1 and R2 are TBS, R4 and R4 are BOC, R3 and R3 are H, and Z is sultam ST or sultam ST', or SEM. In some embodiments, RA is 2-methyl- thiazol-4-yl, RB and Rc are methyl. Thus, in these embodiments of the invention, the acyclic precursor IV is a compound of formula lVax or IVax', acyclic precursor XXVI is a compound of formula XXVIax or XXVIbx or XXVlbx', acyclic precursor V is a compound of formula Vax, macrolactam VI is a compound of formula Vlax,
macrolactam I is a compound of formula la and the epoxide containing azaepothilone VII is ixabepilone (Scheme 16 and 15). In other embodiments, the acyclic precursor IV is a compound of formula XXVHax or XXVJIax' (Scheme 18), and the fully unprotected acyclic precursor IX is a compound of formula IXa (Scheme 17).
[0077] Preferably, when R4 is BOC and when the Z group is sultam ST or sultam ST', the Z group of intermediate XXVI is converted to OH prior to deprotection of R** (R4).
[0078] The sultam- containing compounds IVax or IVax' provided herein can be converted to Vax via two different routes. In the preferred route, the sultam group of compounds IVax or IVax' is removed by hydrolysis to provide XXVIax using a mixture of a hydroxide and an organic solvents or mixtures of solvents. Preferably hydrogen peroxide (H202) is added to the mixture. The H202 can be aqueous H202. Hydroxides include alkali metal hydroxides such as, but not limited to, LiOH, NaOH, KOH, CsOH, alkaline earth metal hydroxides such as, but not limited to, \Κ·(Οί I)·.. Ba(OH)2, and ammonium hydroxides such as, but not limited to, tetrabutylammonium hydroxide (TBAH). Organic solvents including, but not limited to, ethers such as 2-Me-THF (2- methyltetrahydrofuran), THF (tetrahydrofuran), dimethoxyethane (DME) and alcohols such as methanol (MeOH), ethanol (EtOH), propanols such as «-propanol («-PrOH) and isopropanol ( -PrOH), and butanols such as w-butanol (M-BUOH), and mixtures thereof. H202 is preferably an aqueous solution. When using NaOH as the hydroxide, 2-Me-THF or THF and MeOH are preferred solvent mixtures and yields of XXVIax of greater than 70%. When using tetrabut'lammoniura hydroxide, dimethoxyethane (DME) is preferred as the reaction solvent. Following this reaction step, the BOC protecting group of XXVIax is removed using a Bransted acid, such as HC1 or H2S04, or a Lewis acid such as TMSOTf in a solvent such as DCM (dichloromethane). When the Lewis acid
TMSOTf is used to effect removal of the BOC protecting group to provide amino acid compound Vax, preferably the reaction is conducted in the presence of 2,6-lutidme (2,6- dimethylpyridine). When TFA is used instead of TMSOTf, both the BOC group and the TBS groups of XXVIax are simultaneously removed to provide the fully unprotected ammo acid compound IXa (Scheme 17). Compounds IVax or IVax' can be converted to Vax using an alternative reaction sequence. This alternative reaction sequence comprises the treatment of compound IVax or compound IVax' with a reagent system that can deprotected the BOC protecting group, such as TMSOTf in DCM in the presence of 2,6- lutidine to provide compound XXVIbx or compound X VIbx', respectively, that can then be converted to amino acid compound Vax upon treatment with a mixture of a hydroxide, H202 and an organic solvent or in a mixture of organic solvents. For example, compound XXVIbx or XXVIbx' can be converted to ammo acid compound Vax upon treatment with Li OH or NaOH, aqueous ¾02 in 2-Me-THF or THF and MeOH or mixtures thereof, or upon treatment with tetrabutylammonium hydroxide (TB AH) and aqueous H1O2 in DME. This alternative route to amino acid compound Vax (i.e., via compound XXVIbx or XXVIbx') is less preferred than the route proceeding via XXVIax because the lack of protection of the C 5 amino group allows some, or greater levels of, iV-oxidation to occur. That is, the conversion of compound Wax or IVax' to compound XXVIax and then the conversion of compound XXVIax to amino acid compound Vax is preferred to the corresponding conversion of compound IVax or IVax' to compound XXVIbx or XXVIbx' and then the conversion of compound XXVIbx or XXVIbx' to amino acid compound Vax. Most preferably for the manufacture of ixabepilone using the invention described herein, the intermediate of formula IVax' is converted to the compound of formula XXVIax which is then converted to the compound of formula Vax.
[0079] Ammo acid Vax of this invention is converted to macrolactam V ax using known conditions for macrolactamization. Conditions that can be used for the macrolactamization include those used for peptide coupling reactions known in the arts, which include the use of phosphonium coupling reagents, such as PyBOP (benzotriazol- l-yloxytri(pyrrolidino)-phosphonium hexafluorophosphate), uronium coupling reagents, such as HATU (0-(7-azabenzotriazol-l-yl)-l ,l,3,3-tetramethyluronium
hexafluorophosphate), immonium coupling reagents, such as BOMI (benzotriazol-1- yloxy-AyV-dimethyl-methanimmium hexachloroantimonate), carbodiimide coupling reagents, such as DCC (N,A "dicyciohexylcarbodiimide), imidazolium coupling reagents, such as GDI (Ι ,Γ-carbonyldiimidazole) or BOI (2-(benzotriazol-l-yl)oxy-l,3-dimethyl- imidazolidinium hexafluorophosphate), organophosphorous coupling reagents, such as BOP-C1 (N,N'-bis(2-oxo-3-oxazolidinyl)-phosphinic chloride), acid halogenating coupling reagents, such as cyanuric chloride or TFFH { luorQ-Ν,Ν,Ν' ,Ν" - tetramethylformamidinium hexafluorophosphate), or others, such as chloroformates, BMPI (2-bromo-l-methylpyridinium iodide) or DMTMM (4-(4,6- dimethoxy[l,3,5]triazin"2~yi)-4"methyimorphoiinium chloride) in solvents such as but not limited to THF, in the presence of bases, such as but not limited to DIPEA (N,N- diisopropylethylamine). For example, macrolactamization conditions of the amino acid D4 (see Scheme 5) was reported in J. Org. Chem. 2001, 66, 4369-4378.
[0080] Deprotection of the TBS protecting group of macro lactam compound Vlax using reagents known to cleave siiyl ethers to furnish alcohols provides azaepothilone la. For example, the treatment of macrolactam compound Vlax with TF A in DCM provides azaepothilone la. Similarly, direct treatment of fully unprotected amino acid IXa with conditions suitable for effecting macrolactamization provides la directly (Scheme 7). Conditions that can be used for the macrolactamization of fully unprotected amino acid IXa to provide azaepothilone la include those used for peptide coupling reactions known in the arts, which include the use of peptide coupling agents, such as, but not limited to, HATU, in solvents such as but not limited to THF in the presence of bases, such but not limited to DIPEA. Thus, the synthesis of la from IXa saves ones synthetic step as compared to when Vax is used to make la (via Vlax).
[0081] When the epoxide-containing azaepothilone known as ixabepilone is required, epoxidation of azaepothilone la using conditions known in the arts for epoxidation of carbon-carbon double bonds is conducted (for example, see J. Am. Chem. Soc. 1999, 121, 7050-7062; J. Org. Chem. 2001, 66, 4369-4378 and J. Org. Chem. 2004, 69, 9269- 9284).
[0082] In another embodiment, partially protected intermediates XXII or XXII'
(Scheme 18) can be used to prepare common intermediate I using similar or the same reaction conditions as used for the conversion of compound Ila or Da",
Figure imgf000040_0001
sis of ixabepilone using preferr
Figure imgf000040_0002
Scheme 17 - Synthesis of la from XXViax, via IXa, using preferred methods of the
Figure imgf000041_0001
Scheme 18 - Synthesis of la from partially protected intermediates XXII or
XXIIa', using preferred methods of the invention
E. Advantages of this invention: 10083] As compared to the synthesis route for the preparation of ixabepifone disclosed in U.S. Patent No. 6,867,305 and J. Org. Chem. 2001, 66, 4369-4378, the methods described herein do not require the use of azide-containing reagents or intermediates (compare to Dlb and D3c in Scheme 5). Azide compounds present challenges to industrial manufacturing due to their inherent toxicity and their potentially explosive nature and therefore it is preferred that the use of such compounds is avoided.
10084] In contrast to the other know routes that can be used for the preparation of ixabepilone , the Suzuki reaction step of II and III to provide the product IV, the methods described herein do not require the presence of triphenylarsme (AsPh3).
Triphenyiarsine is an organic arsenic compound and arsenic is known to be toxic.
Surprisingly, in the embodiments described herein, a rapid and efficient Suzuki reaction occurs without the use of an arsenic-based Suzuki reaction catalyst. This result is particularly advantageous in terms of the safety of the manufacturing staff and to avoid the associated waste management required for arsenic-based toxic chemicals.
[0085] Still further, the Suzuki reaction step described herein to couple compound II and compound III to provide product IV proceeds in higher yields than the method described in J. Org. Chem. 2001, 66, 4369-4378. For example, when the iV-BOC protected amine Ilia' is coupled with Ilax', >90% yield can typically be obtained. By contrast, the yield reported in J Org. Chem. 2001, 66, 4369-4378 for the coupling of N- BOC protected amine Ilia' with compound D2a was only 10%. 10086] In contrast to the synthesis route ixabepilone disclosed in J. Org. Chem. 2001, 66, 4369-4378, counting from the Suzuki reaction step, three less synthetic steps are required in the methods of the present invention. This is an advantageous on industrial scales because the do wnstream steps during the manufacturing of pharmaceutical substances are most costly because of the high level of regulation to be applied to ensure that the final active pharmaceutical substance is of high quality fit for human
consumption. Therefore it is most cost efficient to minimize the number of downstream synthetic steps from the point at which the high level of regulation is required.
[0087] Chiral amine derivative XII is a novel compound that can be prepared with high chiral purity using an aspect of this invention [e.g., the allyl Gngnard reagent addition to compound XI). This chiral amine is useful for the synthesis of a whole series of N- protected analogues, III, which have been shown herein to be useful in the synthesis of ixabepilone.
[0088] Ixabepilone can be prepared from three building blocks, and in some embodiments these three building blocks can be prepared using known methods, and in other embodiments these can be prepared using methods described herein.
[0089] In accordance with the embodiments described above and the Examples provided below, the present invention provides a process for preparing an azaepothilone of formula I
Figure imgf000042_0001
wherein
RA is selected from substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl;
RB is selected from IT, alkyl and substituted or unsubstituted aryl; and
Rc is selected from H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and
substituted or unsubstituted heteroaryl;
the process including: a) contacting a borane derivative of a compound of formula
Figure imgf000043_0001
wherein
is selected from the group consisting of
Figure imgf000043_0002
ST and ST'
, and
RJ and Rz are independently selected from hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and feri-butyldiphenylsilyl (TBDPS),
with a vinvi halide of formula III,
Figure imgf000043_0003
wherein RJ and R" are independently selected from H, tert- butyloxycarbonyl (BOC), or tert-butylsulfonyl (S02i~Bu), or together R3 and R4 are CPh2, in the presence of a transition metal catalyst to provide a compound of the formula
Figure imgf000043_0004
b) converting the compound of formula IV to a compound of formula V
Figure imgf000044_0001
by converting Z to OH and converting RJ and R to H when one or both of
R3 and R'* are other than H;
c) cyclizing the compound of formula V to provide a compound of formula VI
Figure imgf000044_0002
d) deprotecting the compound of formula VI to provide the azaepothilone of formula I,
In some embodiments, the invention provides a process for preparing epoxide- containing azaepothilone of formula V I
Figure imgf000044_0003
wherein
R' is selected from substituted or unsubstituted arvl and substituted or unsubstituted heteroaryl;
Rb is selected from H, alkyl, and substituted or unsubstituted aryl;, and
Rc is selected from H, alkyl, substituted or unsubstituted aryl, substituted or
unsubstituted heteroaryl, and fluoroalkyl;
the process including: a) treating a compound of formula VI
Figure imgf000045_0001
wherein R .1 and R' are independently selected from hydrogen, silylalkyl TES, TIPS, TBS and TBDPS,
with an epoxidizing agent to form a compound of formula VIII
Figure imgf000045_0002
b) deprotecting the compound of formula VDI to provide the epoxide containing azaepothilone VII. i] In some embodiments, the compound of formula VI is prepared according to a method including: a) contacting a borane derivative of a compound of formula II
Figure imgf000045_0003
wherein
Z is selected from the group consisting o
Figure imgf000045_0004
ST and
, and R1 and R are independently selected from hydrogen, triethylsifyl (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS),
with a vinyl halide of formula III
Figure imgf000046_0001
wherein R3 and R* are independently selected from H, tert- butyloxycarbonyl (BOC), and tert-butylsulfonyl (S02t-Bu), or together RJ and R4 are CPh2,
in the presence of a transition metal catalyst to provide a compound of the formula IV
Figure imgf000046_0002
converting the compound of formula IV to a compound of formula V
Figure imgf000046_0003
by converting Z to OH and converting R and R4 to IT when one or both of R' and R* are other than H, wherem the converting steps are conducted in any order; and c) cyclizing the compound of formula V to the compound of formula VL
10092] In some embodiments, the invention provides a process for the preparation of a compound of formula I
Figure imgf000047_0001
wherein
R' is selected from substituted or unsubstituted aryl and substituted or unsubstitute heteroaryl,
RB is selected from H, alkyl and substituted or unsubstituted aryl,
Rc is selected from H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and
substituted or unsubstituted heteroaryl (including thiazole, isooxazole), the process including:
a) contacting a borane derivative of a compound of formula II
Figure imgf000047_0002
wherein
selected from the group consisting of
Figure imgf000047_0003
ST and ST
, and
R and R" are independently selected from hydrogen, tnethylsilyl (TES), triisopropylsiiyl (TIPS), tert-butyldimethyisilyl (TBS) and te/ -butyldiphenylsilyl (TBDPS),
with a vinyl halide of formula III,
Figure imgf000048_0001
wherein R and R4 are independently selected from H, tert- butyloxycarbonyl (BQC), or fert-butylsulfonyl (S02t-Bu), or together R' and R4 are CPh2)
in the presence of a transition metal catalyst to provide a compound of the formula IV
Figure imgf000048_0002
b) converting the compound of formula IV to a compound of formula IX
Figure imgf000048_0003
by converting Z to OH and converting R!, R2, and R4 to H when any or all of R1, R\ R3 and R4 are other than H, wherein the converting steps are conducted in any order; and
c) cyclizing the compound of formula IX to provide the compound of formula I. [0093] In some embodiments, the borane derivative is prepared from the compound of formula II by reaction with a borane selected from the group consisting of 9-borabicyclo- [3.3. ljnonane (9-BBN), 9-borabicyclo[3.3.1 ]nonane dimer (9-BBN dimer),
disiamylborane, and dicyclohexviborane. In some embodiments, the borane is selected from 9-borabicyelo~[3, 3. l jnonane (9-BBN) and 9-borabicyclo[3.3. l jnonane dimer (9- BBN dimer). In some embodiments of the invention, the transition metal catalyst includes a metal selected from Ni and Pd.
10095] In some embodiments, Z is converted to OH by treatment of the compound of formula IV with a mixture including aqueous H202, a hydroxide, and a solvent. In some embodiments, the hydroxide is selected from the group consisting of sodium hydroxide and lithium hydroxide and the solvent comprises a mixture of 2-methyltetrahydrofuran or tetrahydrofuran and methanol.
[0096] In some embodiments, the processes further includes converting the compound of formula I to an epoxide-containing azaepothilone of formula VII
Figure imgf000049_0001
by epoxidising the compound of formula I.
[0097] In some embodiments, RA is a 2-methyl-thiazol-4-yl group
Figure imgf000049_0002
RB and Rc are methyl.
[ΘΘ98] In some embodiments, the invention provides a process for preparing a compound of formula III'
Figure imgf000049_0003
wherein RA is aryl or heteroaryl, and RB and Rc is selected from the group consisting of H, alkyl, fluoroalkyl, an unsubstituted or substituted aryl group, and an unsubstituted or substituted heteroaryl group,
the process including: a) contacting a compound of formula X
Figure imgf000050_0001
in an orsanic solvent wi ith tert-butanesulfinamide in the presence activating agent to provide a compound of formula XI
Figure imgf000050_0002
b) contacting the compound for formula XI in an organic solvent with an allylating reagent AL
Figure imgf000050_0003
wherein the value n is between 1 to 4, to provide a compound of formula XII
Figure imgf000050_0004
c) converting the compound of formula XII in an organic solvent to a compound of formula XIII bv treatment with an acid
Figure imgf000050_0005
wherein X is a halogen and subscript m is 0, 1 or 2;
d) protecting the compound of formula XIII by its reaction with di-tert-butyl dicarbonate in an organic solvent to give a compound of formula XIV.
Figure imgf000051_0001
e) converting the compound of formula XlVa to the compound of formula
[0099] in some embodiments, the organic solvent of step a) is toluene and the activating reagent is KHSO4
[0100] in some embodiments, M is selected from Mg, Zn, and In. In some embodiments, step b) provides a mixture of the compound of formula XII and a diastereomer of the formula
Figure imgf000051_0002
in a diastereomeric ratio of greater than about 10: 1.
[0101] In some embodiments, the allylating reagent of step b) is allyl magnesium bromide and the organic solvent is a mixture of 2-methyltetrahydrofuran and dichloromethane.
[0102] In some embodiments, the compound of formula Ilia is further converted to a compound of formula Illb
Figure imgf000051_0003
by a deprotection step.
[0103] In some embodiments, the compound of formula Illb is further converted to a compound of formula IIIc
Figure imgf000052_0001
by protection with a member selected from benzophenone, a benzophenone imine, and a benzophenone dialkyi acetal.
[0104] In some embodiments, Ilia is further converted to a compound of formula
Figure imgf000052_0002
by protection with di-ftri-butyl dicarbonate.
5] In some embodiments, the invention provides a process for the preparation of
Figure imgf000052_0003
wherein RA is selected from aryl and heteroaryl, and RB and Rc is selected from H, alkyl and aryl, the method including:
a) oxidizing the compound of formula XII
Figure imgf000052_0004
to provide a compound of formula XVb
Figure imgf000053_0001
b) converting the compound of formula XVb into the compound of formula Ille.
[Θ1Θ6] In some embodiments, the compound of formula XII is prepared by a process including: a) converting a compound of formula X
O B
X K
to a compound of formula XI
Figure imgf000053_0002
b) adding an allylating reagent of formula AL , AL
wherein n is a value between 1 and 4, to the compound of formula XI to provide compound of formula XII.
[0107] In some embodiments, RA is a 2-methyl-thiazol-4-yl group
Figure imgf000053_0003
methyl. [0108] In some embodiments, the invention provides a process for the preparation of a compound of formula II
Figure imgf000054_0001
wherein Z is sultam ST'
Figure imgf000054_0002
5T , and
R! and R2 are independently selected from hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), fe/f-butvddimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS);
the process including:
a) activating a compound of formula XVI'
Figure imgf000054_0003
treating the activated compound of formula XVI' with a compound of formula XVII
Figure imgf000054_0004
in the presence of a Lewis acid to provide a compound of formula XVIII'
Figure imgf000054_0005
c) optionally protecting the hydroxy 1 group of the compound of formula XVIII' with a protecting group selected from triethylsilyl (TES), triisopropylsilyl (TIPS), tert-butyldimethylsilyl (TBS) and fert-butyldiphenylsilyl (TBDPS) to provide a compound of formula XIX'
Figure imgf000055_0001
d) activating the compound of formula XVIII' or the compound of formula XIX' and then reacting the activated compound with a compound of formula XX
Figure imgf000055_0002
XX
to provide the compound of formula II wherein R" is H; e) optionally protecting the hydroxy! group of the compound of formula II with a protecting group selected from the group consisting of triethylsilyl (TES), triisopropylsilyl (TIPS), tert-butyldimethyisilyl (TBS) and ter -butyldiphenylsily3 (TBDPS) to provide a compound of formula II wherein R1 and R2 are both hydroxy protecting groups independently selected from the group consisting of triethylsily l (TES), triisopropylsilyl (TIPS), fert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS).
[0109] In some embodiments, activating the compound of formula XVI' in step a) includes contacting the compound of formula XVT with a silyl triflate reagent and a base. In some embodiments, wherein the silyl triflate reagent is te t-butyldimethylsilyl triflate (TBSOTf) and the base is triethylamine.
[0110] In some embodiments, the Lewis acid of step b) is a metal halide. In some embodiments, the metal halide is titanium tetrachloride (T1CI4).
[0111] In some embodiments, the activating step of step d) is conducted by treating the compound of formula XVHF or the compound of formula XIX' with a Lewis acid in the presence of an amine base at a low temperature. In some embodiments, the amine base is Ν,Ν-diisopropylethylamine and the low temperature is equal to or colder than ~50 °C. In some embodiments, R! and R2 are both tert-butyldimethylsilyl (TBS).
[0113] In some embodiments, the epoxide-containing azaepothilone VII is ixabepilone
Figure imgf000056_0001
IV. EXAMPLES
[0114] The following examples are provided to further illustrate, but not to limit this invention.
[0115] The symbols, conventions and abbreviations used in the above specification and in the following examples are consistent with those used in the contemporary scientific literature, for example, Journal of the American Chemical Society and The ACS Style Guide: effective communication of scientific information, 3rd ed.; Coghill, A. M. and Garson, L. R. ed.; Washington, DC, Oxford University Press, New York Oxford, 2006.
[0116] Abbreviations: atm— atmosphere; AcOH— acetic acid; aq.— aqueous; brine— saturated aqueous sodium chloride solution; Bu-— butyl; BuOH— butanol; t-Bu— ten- butyl; w-BuLi— -«-butyllithium; 9-BBN-— 9-borabicyclo[3.3.1 ]nonane; 9-BBN-dimer— 9- borabicyclo[3.3.1 jnonane dimer; BOC— tert-butyloxycarbonyl; (BOC)20— di-fert-butyl di carbonate (BOC anhydride); B.P.— boiling point; d.e.— diastereomeric excess; d.r.— diastereomeric ratio; DIPEA— -N^V-diisopropylethylaraine (Humg's base); DMDO— dimethyldioxirane; DMSO— dimethylsulf oxide; DCM— dichloromethane; DCE— dichloroethane; DIBAL— diisobutylaluminium hydride; DMAP— 4- dimethylaminopyridine; DME— dimethoxyethane; DMT— N,N-dimethylformamide; dppf— diphesiylphosphinoferrocene; e.e.— enantiomeric excess; Et-— ethyl; Et20— diethyl ether; EtOAc— ethyl acetate; g— -gram(s); h— hour(s); HATU— (0-(7- azabenzotriazol- 1 -yiyN V T ,Λ" -tetramethyluronium hexafluorophosphate; HMDS— hexamethyldisilazane; HPLC— -High performance liquid chromatography; mg— milligram(s); L— liter(s); LiHMDS— lithium bis(trimethylsilyl)amide; futidine/2,6- iutidine— 2,6-dimethylpyridine; mCPBA— -ff/eto-chloroperoxybenzoic acid; mL— milliliter(s); M— molarity; MeOH-— -methanol; moi— -mole(s); mmol— millimole(s); min-— minutefs); Me— methyl; M.P.— melting point; MS— -mass spectrometry (LCMS is liquid chromatography mass spectrometry); MTBE— methyl tert-but l ether; N—
normality; NaHMDS— sodium bis(trimethylsiiyl)amide; NMP— N-methylpyrrolidinone; NMR— uclear magnetic resonance (spectroscopy); NMO— N-methyimorpholine-N- oxide; MHz— megahertz; Pr— ropyl; Ph— phenyl ((*-,! ); z'-PrOH— isopropanol; n- PrOH— M-propanol; PhMe— toluene; PhCl— chlorobenzene; R— retention factor; sat.— saturated; SEM— 2-(trimethyisilyl)ethoxymethyl; SEMC1— 2-
(trimethylsilyl)ethoxymethyl chloride; TLC— thin layer chromatography; TBAF— tetra- w-butylammonium fluoride; TBAH— tetra-w-butylammonium hydroxide; TBS— tert- butyldimethylsilyl; TBSC1— tert-butyldimethylsilyl chloride; TBDPS— tert- butyldiphenylsilyl; TBDPSC1— tert-butyldiphenylsilyl chloride; TBSOTf— tert- butyldimethylsiiyl inflate; TES— triethylsilyl; TESC1— triethylsilyl chloride; Tf— trifluoromethanesuifonyl; TEA— trifluoroacetic acid; THE— tetrahydrofuran; TIPS— triisopropylsilyl; TIPSC1— triisopropylsilyl chloride; TMSOTf— trimethylsilyl triflate; UV— ultraviolet
Example 1 - Preparation of XlXa asad XKa'
Figure imgf000057_0001
[0117] To a solution of compound XVI' (100 g, 389 mmol) in dry DCM (800 mL) was added EtsN (73 mL, 506 mmol) and TBSOTf (113 g, 428 mmol) dropwise at room temperature under an atmosphere of N2. The resulting reaction mixture was stirred at room temperature overnight (solution A). In a separate flask, to a solution of XVII (80 g, 622 mmol) m dry DCM (500 mL) was added TiCl4 (1 N in DCM, 650 mL, 650 mmol) at -78 °C under an atmosphere of N2. After stirred at -78 °C for 10 minutes, solution A was added dropwise into the XVII solution over 1 hour, then the resulting mixture was warmed to room temperature and stirred overnight. After completion by TLC, the reaction mixture was quenched with sat. aq. NH4C1. The aqueous layer was extracted with DCM (400 mL x2). The combined organic layers were dried over Na2S04, filtered and evaporated. The residue was diluted with hexane (500 mL) and stirred overnight for precipitation. The solid was filtered and washed with hexane to give 109 g of XVJIP (d.r, >20: 1, Rf= 0.3, EtO Ac/petroleum ether= 1 : 5, KMn04) as white solid in 73% yield. M.P.= 100-102 °C: 1H NMR (400 MHz, ClX I-. j δ 4.31 (brs, 1H), 3.878 (t, ./ 6 Hz, IH), 3.475 (q, J= 13.6 Hz, 2H), 2.812 (d, J= 6 Hz, 2H), 2.594-2.511 (m, 2H), 2.171-2.042 (m, 2H), 1.924-1.877 (m, 3H), 1.433-1.355 (m, 2H), 1.172 (s, 3H), 1.158 (s, 3H), 1.128 (s, 3H), 1.031 (t, ./ 6.8 Hz. 3H), 0.968 (s, 3H); 13C NMR (100 MHz, CDCI3) δ 215.7, 171.3, 73.1 , 65.3, 53.0, 51.2, 48.6, 47.9, 44.7, 38.4, 37.8, 39.2, 31.6, 26.5, 21.8, 20.9, 20.0, 19.2, 8.0.
Preparation of compound XVIII'
Figure imgf000058_0001
[0118] Under N2 atmosphere, to a solution of XVI' (200 g, 777 mmol) in dry DCM (800 mL) was added triethylamine (146 mL, 1047 mmol) and TBSOTf (231 g, 874 mmol) dropwise at 22 °C. The mixture was stirred at room temperature for 3 hours and was added dropwise over 2 hours to a solution of II (160 g, 248 mmol) and TiCl4 (1 M in DCM, 1300 mL, 1300 mmol) in dry DCM (1000 mL) at -70 to -78 °C. The resulting mixture was slowly warmed to 22 °C in a rate of 15 °C per hour. The reaction mixture was stirred at 22 °C for another hour and was quenched by adding sat. aq. NH4CI (1000 mL) and H20 (800 mL). After layer separation, the organic layer was washed with H20 (1000 mL *3), dried over Na2S04 for 4 hours, filtered, concentrated at 40-65 °C and co-evaporated with «-heptane (600 mL *2). The desired product was then precipitated by stirring in «-heptane (1000 mL) overnight filtered and washed with w-heptane (400 niL x2) to give XVIII' as an oily solid (262 g, yield: 87%, 92.5% HPLC purity, d.r.= 24.7: 1).
Figure imgf000059_0001
[01.1.9] To a solution of compound XVI (21.45 g, 83.33 mmol) in dry DCM (215 mL) was added Bu2BOTf (100 mL, 1 M) at 0 °C under an atmosphere of N2, the reaction mixture was stirred for 30 minutes, then DIPEA (17.3 mL, 104.16 mmol) was added, and the reacting mixture was stirred for another 30 minutes. After the resulting mixture was cooled to -78 °C, XVII (14.95 g, 116.67 mmol) was added dropwise. The reaction temperature was allowed to warm to room temperature and stirred overnight. The reaction mixture was quenched with sat. aq. NH4CI, then extracted with EtOAc. The combined organic layer were dried over Na2S04, filtered and evaporated. The residue was purified by column, eluting with petroleum ether/EtOAc= 20: 1 to 5: 1) to give XVIII (23g, yield: 71.9%) as a white solid. 1H NMR (400 MHz, CDCI3) δ 4.30 (m, 1H), 3.87(m, 1H), 3.45 (m, 2H), 3.25 (m, IH), 2.80 (m, 2H), 2.55 (m, 2H), 2.08 (m, 2H), 1.89 (m, 3H), 1.37 (m, 2H), 1 , 17 (s, 3H), 1, 15 (s, 3H), 1 , 12 (s, 3H), 1 ,02(t, J= 7.2 Hz, 3H), 0.97 (s, 3H); i3C NMR (100 MHz, CDCI3) δ 216.1, 171 ,5, 73.0, 65.4, 53, 1, 51.2, 48.7, 48.0, 44,9, 38.6, 38.0, 33, 1, 31.4, 26.6, 21,8, 21.06, 20.1, 19,4, 8.1.
Figure imgf000059_0002
[Θ12Θ] To a solution of XVIIF (69 g, 179 mmol) in dry DCM (600 mL) at "45 °C was added 2,6-lutidme (57.6 g, 537 mmol) and TBSOTf (104 g, 394 mmol) dropwise under an atmosphere of N2. The reaction mixture was stirred at this temperature for 2 hours and continued to stir at room temperature overnight. The reaction mixture was quenched with MeOH (50 mL), washed with sat. aq. citric acid, dried over Na2S04, filtered and evaporated. The residue was diluted with petroleum ether (100 mL, B.P.= 60-90 °C) and stirred overnight. The precipitation were filtrated and washed with petroleum ether (30 mL x3) to give Ma' ( R, 0.6, EtOAc/petroleum etlicr 1 : 5, KMnOa} (62.6 g, yield: 70%) as a white solid. M P 91-93 °C; ' l l NMR(400 MHz, CDC13) δ 4.729 (t, ./ 4.8 Hz, I H), 3.84 (dd, ,/ 7.6 Hz, 2.8 Hz, 1 1 1 ). 3.446 (q, ./ 14 Hz, 2H), 2.81 1 (d, ,/ 4.4 Hz, 2H), 2.568-2.459 (m, 2H), 2.191-2.145 (m, IH), 2.086-2.032 (m, IH), 1.905-1.865 (m, 3H), 1.394-1.343 (m, 2H), 1.161 (s, M l ). 1.065 (s, 3H), 0.991 (t, 6.8 Hz, 3H), 0.963 (s, 3H), 0.824 (s, 9H), 0.065 (s, 3H), 0.013 (s, 3H); "C NMR (100 MI I/. CDCI3) δ 214.9, 170.1, 71.8, 65.6, 53.0, 52.7, 48.5, 47.8, 44.8, 40.5, 38.6, 33.1, 31.5, 26.6, 26.0, 20.9, 20.8, 20.6, 20.0, 18.2, 7.8, -4.1, -5.0.
Figure imgf000060_0001
[0121] Under N2 atmosphere, to a solution of XVIII' (282 g, 731 mmol, 93% HPLC purity) in dry DCM (2260 mL) was added 2,6-lutidine (219 g, 2.04 mol) and TBSOTf (396 g, 1 .50 mol) dropwise at -45 to -50 °C. The reaction mixture was stirred at -45 to -50 °C for 2 hours and at 22 °C for another hour. After the reaction was complete, as judged by HPLC, the reaction was quenched by adding MeOH (225 mL) and the mixture was washed with sat. aq. citric acid (1410 mL. x2), dried over Na2S04 (423 g) for 4 hours and concentrated. The desired product was precipitated by stirring in w-heptane (846 mL) for 4 hours, filtered, washed with «-heptane (564 mL *2) to give XlXa' as a white solid (235 g, yield: 64%, 98.1 % HPLC purity).
Figure imgf000060_0002
[0122] To a solution of XVIII (23 g, 59.66 mmol) in dry DCM (160 mL) at -45 °C, was added 2,6-lutidine (10.4 mL, 89.49 mmol) and TBSOTf (16.8 mL, 71.59 mmol) dropwise under an atmosphere of N2. The reaction mixture was stirred at this
temperature for 2 hours and continued to stir at room temperature overnight. The reaction mixture was quenched by MeOH and evaporated. The residue was re-dissolved in EtOAc, washed twice with critic acid solution, dried over Na2S04, filtered and evaporated. The residue was purified by column chromatograph on silica gel (eluents: petroleum ether/EtOAc= 10: 1) to give XlXa as a white solid (19.2g, yield: 64.4%). Ή NM (400 MHz, CDC13) δ 4.65 (m, i ! ! j. 3.83 ( m. 1H), 3.45 (m, 2H), 2.93 (m, 1H), 2.65 (m, 1H), 2.50 (m, 2H), 2.10 (m, 2H), 1.86 (m, 3H), 1.36 (m, 2H), 1.14 (s, 3H), 1.13(s, 3H), 1.05 (s, 3H), 0.95 (m, 6H), 0.83 (s, 9H), 0.06 (s, 3H), 0.04 (s, 3H).
Figure imgf000061_0001
Xia [0123] To a solution of Xa (35 g, 200 mmol, Rf = 0.5, EtO Ac/petroleum ether= 1 :3, UV) in dry THE (414 mL) was added (R)-t<?rt-butyl-sulfinamide (29 g, 400 mmol) and Ti(?-PrO)4 ( 8 mL, 400 mmol) at room temperature under an atmosphere of N2, then the reaction mixture was stirred overnight. The mixture was cooled to 5 °C with ice bath and brine (150 mL) was added cautiously. The resulting suspension was diluted with EtO Ac ( 00 mL) and filtered through a pad of diatomaceous earth and the filter cake was washed with EtO Ac (1 50 ml. x2). The filtrate was washed with brine (260 mL x3), dried over Na2S04, filtered and concentrated under reduced pressure. The residue was purified by column chromatography on silica gel (EtOAc/petroleum ether== 1 : 5) to give Xia (42 g, yield: 77%, r 0.4, EtO Ac/petroleum ether- 1 :3, UV) as a yellow solid. 1H NMR (400 MHz, CDC33) δ 8.25 (s, I I I ). 7.31 (s, i l l ). 7.04 (s, l i s ). 2.74 (s, 31 1 ). 2.37 (s, 31 1 ). 1.22 i s. 9H); i3C NMR (100 MHz, CDCI3) δ 366.8, 165,6, 1 52. 1 , 135.6, 121 ,4, 57,5, 22.5, 19,4, 13.3.
Figure imgf000062_0001
[0124] Under an atmosphere of N2, to a solution of Xia (30 g, 11 1 mmol, R = 0.7, EtO Ac/petroleum ether= 1 : 1 , UV) in dry DCM (750 mL) was added allylmagnesium bromide (185 mL, 555 mmol, 3N in Et20) at -50 °C. After addition, the reaction mixture was stirred at this temperature for another 1.5 h. Sat. aq. NH4CI (580 mL) was added to quench the reaction at -50 °C and the mixture was warmed to room temperature. The organic layer was separated and the aqueous was extracted with DCM (300 mL x3). The combined organic phase was washed with brine (500 mL *3), dried over Na?S04, filtered and concentrated under reduced pressure. The crude was analysed by HPLC showing a d.e. of 98.0%. The crude was purified by column chromatography on silica gel
(EtO Ac/petroleum ether= 1 : 1) to give Xlla as a yellow oil (29 g, yield: 83.8%, HPLC showing a d.e. of 99.4%). Ή NMR (400 MHz, CDCI3) δ 6.85 (s, H i ). 6.45 (s, i l l ). 5.70-5.60 (m, I H), 5,08-5.02 (m, 2H), 3,87 (t, ,/ 6.4 Hz, 1H), 3.35 (s, 1H), 2.58 (s, 3H), 2.40-2,22 (m, 2H), 1.92 (s, 3H), 1 .10 (s, 9H); 13C NMR (100 MHz, CDCI3) δ 164, 5, 152.4, 139.3, 134.0, 121 ,5, 1 1 7.7, 1 16.2, 62,8, 56.0, 38.0, 22,6, 19.2, 14.9,
[0125] Under an atmosphere of N2, to a suspension of indium powder (170 mg, 1.48 mmol) and Xia (100 mg, 0,37 mmol) in sat NaBr (3.7 mL) was added allyl bromide (0.13 mL, 1 .48 mmol) at room temperature. Then the reaction mixture was stirred for 20 h at room temperature. The mixture was then quenched by addition of brine (7.4 mL) and EtO Ac (7.4 mL), filtered through a pad of silica gel and eluted with EtO Ac. The organic phase was separated and the aqueous layer was extracted with EtO Ac. The combined organic phase was dried over MgS04, filtered and concentrated under reduced pressure. The crude was determined by HPLC (conversion: 44%, d.e.-'-'-- 100%).
[0126] Under an atmosphere of N?, to a suspension of activated zinc powder (72 mg, 1.1 mmol) and Xia (100 mg, 0.37 mmol ) in dry THF (7.0 mL) was added ally! bromide (0.10 mL, 1.1 mmol) at room temperature. Then the reaction mixture was stirred for 1 h at room temperature. The mixture was then quenched by addition of sat. aq. NH4C1 (8.0 mL) and EtOAc (8.0 mL). The organic layer was collected and the aqueous layer was extracted with EtOAc. The combined organic phase was dried over MgS04, filtered and concentrated under reduced pressure. The crude was determined by HPLC (conversion:
Figure imgf000063_0001
[0127] Under an atmosphere of N2, to a suspension of activated zinc powder (78 mg, 1.2 mmol), In(OTf)3 (340 mg, 0.6 mmol) and XIa (110 mg, 0.4 mmol ) in diy THF (7.6 mL) was added allyl bromide (0.10 mL, 1.2 mmol) at room temperature. Then the reaction mixture was stirred for 2 h at room temperature. The mixture was then quenched by addition of sat. aq. NH4CI (8.0 mL) and EtOAc (8.0 mL). The organic layer was collected and the aqueous layer was extracted with EtOAc. The combined organic phase was dried over MgS04, filtered and concentrated under reduced pressure. The crude was determined by HPLC (conversion: >97%, d.e = 93.8%).
[0128] Under an atmosphere of N2, to a suspension of activated zinc powder (75 mg, 1.16 mmol), InCl3 (128 mg, 0.58 mmol) and XIa (104 mg, 0.38 mmol) in THF (7.7 mL) was added allyl bromide (0.1 OmL, 1.2 mmol) at room temperature. Then the reaction mixture was stirred for 2 h at room temperature. The mixture was then quenched by addition of sat. aq. H4CI (8.0 mL) and EtOAc (8. OmL), the organic layers was collected and the aqueous layer was extracted with EtOAc. The combined organic phase was dried over MgS04, filtered and concentrated under reduced pressure. The crude was detected by HPLC (conversion: 83.6%, d.e.= 70.2%), [0129] Under an atmosphere of N2, a suspension of activated zinc powder (150 mg, 2.32 mmol) and allyl bromide (0.20mL, 2.4 mmol) in dry THF (7.8 mL) was stirred for 1.5 h at room temperature, then the mixture was cooled to -78 °C and XIa (104 mg, 0.38 mmol) in dry THF (1 mL) was added. The reaction mixture was stirred for 6 h at -78 °C. The mixture was then quenched by addition of sat. aq. NH4CI (16.0 mL) and EtOAc (16.0 mL), the organic layer was collected and the aqueous layer was extracted with EtOAc. The combined organic phase was dried over MgS04, filtered and concentrated under reduced pressure. The crude was purified by column chromatography to give Xlla as a white solid (84 mg, yield: 70%, d. . 70%).
Figure imgf000064_0001
[0130] To a solution of Xa (100 g, 0.60 mol, 93% HPLC purity) in dry toluene (800 mL, KF <200 ppm) was added ( ?)-tert-butyl-sulfinamide (94.2 g, 0.78 mol) and KHSO4 (163 g, 1 .20 mol) at room temperature under N2 atmosphere. After stirring at 25-35 °C for 2 hours, the reaction mixture was filtered through a pad of silica gel and the filter was washed with toluene (100 mL *3). The combined filtrates were washed with sat. aq.
NaHC03 (500 mL) and H20 (500 mL), and concentrated under vacuum to give XIa (170 g, 93.7% HPLC purity) as a yellow solid, which was used directly for the next step.
[01.31] Under N2 atmosphere, to a suspension of Mg (100 g, 4.1 1 mol, 100-200 mesh) in dry 2-Me-THF (1.5 L, KF 200 ppm) was added (2.00 g, 7.88 mmol) at 35-45 °C over 2 hours. After cooling to—25 °C, a solution of ally! bromide (484 g, 4.00 mol) in dry 2-Me-THF (0.5 L, KF <200 ppm) was added dropwise slowly while controlling the temperature at—25 to— 15 °C (in about 2.5 hours). After stirring for 1 hour, the mixture was slowly warmed to 25 °C and stirred for another 2 hours. The resulting suspension was settled and the desired allvlmagnesium bromide reagent was obtained by decanting the upper clear layer from the reactor.
[0132] Under N2 atmosphere, to a solution of crude XIa (170 g, from 0.60 mol of Xa) in dry DCM (800 mL) was added dropwise a solution of prepared allvlmagnesium bromide in 2-Me-THF (480 mL) at <-40 °C. After stirring at <-40 °C for 0.5 hour, sat. aq. NH4CI (500 mL) was slowly added dropwise into the reaction mixture while maintaining the internal temperature <~20 °C. After the resulting mixture was warmed to 10-20 °C, the layers were separated. The aqueous layer was extracted by MTBE (400 mL) and the combined organic layers were washed with H20 (800 mL) and concentrated to 200 mL. The solvents were co-evaporated by w-heptane (500 mL *3) to 300 mL. The resulted suspension was slowly cooled to 0 °C, stirred for 2 hours and filtered. The solids were washed with «-heptane ( 170 mL) and dried under vacuum at 40 °C for 16 hours to give Xlla (172 g, yield: 92% from Xa in 2 steps, 93% HPLC purity, >99% tie.) as an off-white solid.
Figure imgf000065_0001
[0133] To a solution of Xlla (29 g, 93 mmol, ¾= 0.6, EtOAc, UV) in dioxane (280 mL) was added aq. HC1 in dioxane (150 mL, 4 N) dropwise at 5 °C. After addition, the reaction mixture was stirred at room temperature overnight. Then the solvent was evaporated off under reduced pressure and the residue was diluted with water (500 mL). The aqueous was extracted with EtOAc (150 mL *2). The aqueous was basified until the pH= 9 using aq. NaOH (1 N) and extracted with EtO Ac (150 mL x3). The organic layers were combined, washed with brine (100 mL x3), dried and concentrated under reduced pressure to give Xffla (14 g, yield: 73%, Rf= 0.5, MeOH DCM = : 10, UV) as a brown oil which was used directly without any purification. Ή NMR (400 MHz, CDC13) δ 6.83 (s, I I I). 6.42 (s, I I I ). 5.74-5,64 (m, i l l ). 5.06-4,98 (m, 2H), 3.42-3,39 (m, IH), 2.62 (s, 3H), 2.31-2,26 (m, 21 1 ). 1.96 (s, 3H), 1.42 (brs, 2H); 13C NMR (100 MHz, CDCI3) δ 164.2, 153,0, 143.3, 135.4, 118.5, 115, 1 , 58.9, 40.2, 29,8, 1 9.1, 14.8.
Preparation of XiVax
Figure imgf000065_0002
[0134] To a solution of compound Xllla (3 g, 14.4 mmol, Rf= 0,5, MeOH/DCM = 1 : 10, UV) in THE (30 mL) was added Et3N (3 g, 28.8 mmol) at room temperature, followed by addition of (Boc)20 (3.5 g, 15.8 mmol) in THF (30 mL). The reaction was stirred overnight. After TLC analysis (petroleum ether EtOAc= 5: 1) showed the reaction was complete, the mixture was diluted with sat. aq. NH4CI solution (50 mL) and EtOAc (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL x3). The combined organic layers were washed with brine (30 mL x3), dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by column chromatography on silica gel to give the mono-protected amine XlVax (4 g, yield: 90.0%, Rf= 0.9, EtO Ac/petroleum ether= 1 :3, UV) as a white solid. Ή N R (400 MHz, CDCI3) £6.91 (s, 1 H); 6.44 (s, 1 H), 5.79-5,69 (nr. I H), 5.14-5.07 (m, 1H), 4.68 (brs, 1 H), 4.22 (brs, 1H), 2.70 (s, 3H), 2.39-2.36 (m, 2H), 2.05 (s, 3H), 1.43 (s, 9 H); "C \MR ( 100 MS fz. CDCI3) δ 164.4, 155.2, 152.9, 139.6, 134.1, 1 18.9, 1 18.0, 115.5, 76.7, 56.8, 38.1, 33.3, 28.4, 19.2, 16.0.
Example 3 - Preparation of Ilia'
The preparation of compound Va
Figure imgf000066_0001
[0135] To a solution of XlVax (10 g, 32.5 mmol, Rf= 0.9, EtO Ac/petroleum ether= 1 :3, UV) in ! ! !l iuOH ! ) (1 : 1 :0.1, 210 mL) was added NMO (9.13 g, 50% aq. solution, 39 mmol) and Os04 (8.3 mL, 0.65 mmol, 1 g in 50 mL t-BuOH) at 0 °C, followed by stirring at 23 °C for 18 h. After TLC analysis
Figure imgf000066_0002
1 : 1 ) showed that the reaction was complete, the reaction mixture was quenched by adding sat. aq. NaHSOs (80 mL) and I¾0 (200 mL) at 0 °C, stirred for 30 mm and extracted with MTBE (100 mL x4). The collected organic layers were washed with brine (100 mL x2), dried over Na2S04 and concentrated under vacuum to give the crude product XXIa (22 g,
R = 0.2, EtO Ac/petroleum ether= 1 :3, UV) as a yellow oil. [0136] To a solution of XXIa (22 g, crude from 32.5 mmol of XlVax, Rf = 0.2, EtO Ac/petroleum eihcr 1 :3, UV) in THF/HjO (1 : 1, 200 mL) was added Nal()4 (16.7 g, 78.0 mmol) at 0 °C and stirred for 40 min. After TLC analysis (Petroleurn/EtOAc= 1 : 1) showed that the reaction was complete, the mixture was quenched with H20 (500 mL) and extracted with EtO Ac (100 mL x4). The collected organic layers were washed with brine (100 mL x3), dried over Na2S04, concentrated and purified by column
chromatography on a short pad of silica gel (Petroieum/EtOAc= 2: 1) to give the product XVa (6.72 g, yield: 66.7%, R = 0.8, EtO Ac/petroleum ether= 1 :3, UV) as a yellow oil. Ή NMR (400 MHz, CDC! ;) δ 9.757 (s, 1H), 6.941 (s, 1H), 6.460 (s, 1H), 4.889 (s, 1H), 4.708 (s, 1H), 2.764-2.725 (m, 2H), 2.694 (s, 3H), 2.087 (s, 3H), 1.428 (s, 9H).
Figure imgf000067_0001
XlVax [0137] To a stirred solution of XlVax (1.57 g, 5.09 mmol) in acetone (35 mL) and water (25 mL) was added sequentially at 30 °C MO monohydrate (1.18 g, 8.73 mmol) and K20s04 »2H20 (33.1 rng, 90 μηιοΐ). The resulting mixture was stirred at 30 °C for 3 hours. After the reaction was complete as judged by HPLC, the osmate was deactivated by adding DMAP (275 mg, 2.25 mmol) at 30 °C and the mixture was stirred for another 30 minutes, followed by adding NaI04 (1.61 g, 7.53 mmol) to proceed the oxidative cleavage. After stirring for 1 hour at 30 °C, the resulting suspension was filtered and the filtrate was concentrated under reduced pressure to remove acetone. The residual aqueous solution was extracted with 2-Me-THF (30 mL. x2) and the combined organic layers were washed with 10% aq. citric acid (30 mL) and brine (30 mL), dried over Na2S04 (11.7 g), filtered and concentrated to afford the crude XVa, which was purified by column chromatography on silica gel (eluent EtOAc/«-heptane= 40:60) to give the pure XVa (907 mg, yield: 57%, Rf= 0.22 for EtOAc/«-heptane= 40:60) as a light brown solid.
The preparation of compound Ilia'
Figure imgf000068_0001
[0138] To a suspension of ethyltriphenylphosphonium iodide (18.2 g, 43.4 mmol) in THF (270 mL) was added w-BuLi (17.4 mL, 2.5 M, 43.4 mmol) at 17 °C under N2 to form a red solution. After disappearance of the solid, the mixture was added to a solution of I2 (11 g, 43.4 mmol) in THF (250 mL) dropwise at -75 to -80 °C to form a yellow suspension. The mixture was stirred at—75 °C for 5 mm and then warmed up to—20 °C. NaHMDS (20.3 mL, 2 M, 40.6 mmol) was added dropwise in 20 mm to afford a red solution and the mixture was stirred for 5 min. To this mixture was added a solution of XVa (6.72 g, 21.7 mmol, Rr 0.3, EtO Ac/petroleum ether- 1 :5, UV) in THF (15 mL) dropwise in 20 min and stirred at—20 to 10 °C for 1 h. After I C analysis (Petroleum: EtOAc= 2: 1) showed that the reaction was complete, the reaction mixture was filtered through a pad of diatomaceous earth, concentrated and purified by column
chromatography on silica gel (Petroleum/EtOAc= 5: 1) to give a yellow oil of Ilia' (3.7 g, yield: 38%, M.P .= 65-67 °C, Rf= 0.6, EtO Ac/petroleum ether= 1 :5, UV) as a single isomer. Ή NMR (400 MHz. CDCI3) δ 6.93 (s, i l l). 6.46 (s. 1 1 1). 5.44 (t, ./ 6.4, IH), 4.69 (d, 7.2, IH), 4.3 (m, IH), 2.70 (s, 3H), 2.50 (s, 3H), 2.35 (m, 21 1 ). 2.06 (s, 31 1). 1.43 (s, 9H);13C NMR (100 MHz, CDCI3) δ 164.5, 155.2, 152.8, 139.4, 131.3, 119.1, 115.7, 103.7, 79.5, 76.7, 56.8, 41.0, 33.7, 28.4, 19.2, 16.1 , 14.2.
Example 4 - Preparation of Ilia'
Preparation of XXIa
Figure imgf000069_0001
[0139] To cooled MeOH (2.0 L, 0-10 °C) was added 37% wt aq. HC1 (200 ml,), while keeping the temperature <30 °C for safety concern, and solid Xlla (276 g, 0,88 mol, 95% HPLC purity). After the reaction was complete as judged by HPLC for 1 hour at 10-30 °C, the solvent was evaporated off under reduced pressure. The residue was diluted by- water (1.3 L) and MTBE (1.3 L), and the layers were separated. The aqueous layer was collected, added MTBE (1.3 L) and basified to pH= 10-1 1 using 10% aq. NaOH (ca. 550 mL). The organic layer was collected and the aqueous layer was extracted by MTBE (1.3 L). The combined organic layers were washed with brine (1.3 L) and H20 (1.3 L) and concentrated to give XUIa as an oil ( 86 g, 94% HPLC purity), which was used directly for the next step.
[0140] To a solution of crude XUIa (186 g, from 0.88 mol of Xlla) in DCM (1.1 L) was added a solution of Boc20 (202 g, 0.93 mmol) in DCM (276 mL) at 0-15 °C. After the reaction was complete as judged by HPLC for 1 hour at 0-25 °C, the reaction was quenched by adding H20 (15.8 g) and the mixture was stirred at 0-25 °C for another 0.5 hour and concentrated (to ca, 300 mL). Standard solvent swaps to w-heptane (1.4 L *2) of the residue gave XlVax (280 g, 96 % HPLC purity) as a yellow solid, which can was used directly for the next step.
[0141] To a solution of XlVax (209 g, from 0.54 mol of Xlla) and (DHQ)2PHAL (21 g, 0.027 mol) in THE (1.7 L) was added a suspension of 4-methylmorpholine TV-oxide (63 g, 0.54 mol) and K2Gs04 «2H20 (10 g, 0.027 mol) in H20 (170 mL) at 0-10 °C. The reaction mixture was stirred at 15-25 °C for 1 hour and after the reaction was complete as judged by HPLC, it was cooled to 0-10 °C and added sat aq. NaHSO-j (850 mL). After stirring for 0.5 hour, the mixture was filtered through a pad of diatomaceous earth and the filter was washed with MTBE (850 mL). The organic layer of the filtrate was collected and the aqueous layer was extracted by MTBE (850 mL). The combined organic layers were washed with brine (1.7 L *2) and concentrated under vacuum to give the crude XXIa (237 g) as a yellow oil, which was purified by column chromatography on silica gel (1.4 Kg, eluents: EtOAc/«-heptane= 1 :3 to EtOAc/MeOH= 100:2) to give the pure XXIa as a diastereomeric mixture (107 g, yield: 58% from Xlla in 3 steps, 99% HPLC purity) while recovering XlVax (38 g, yield: 23% from Xlla, 98% HPLC purity).
Figure imgf000070_0001
[0142] To a sol ution of XXIa (107 g, 0.31 mol) in THF/¾0 (2.0 L, 1 : 1) at 0-10 °C was added NaIO/4 (80 g, 0.37 mol) in 10 portions over 45 minutes. When the reaction was complete as judged by HPLC after 0.5 hour, the mixture was directly extracted with EtOAc (1.0 L x2). The combined organic layers were washed with brine (1.0 L) and concentrated to give XVa as an off-white solid (91 g, 98% HPLC purity), which was used directly for the next step.
[0143] Under N2 atmosphere, to a suspension of MeCHIPP al (264 g, 0.49 mol) in THE (2.0 L) was added NaHMDS (480 mL, 2,0 M in THE) at -25 to -20 °C to form a red solution, which was stirred at -25 to -20 °C for 0.5 hour before it was further cooled to -60 to -50 °C. A solution of XVa (100 g, 0.32 mol) in THF (300 mL) was added to the above mixture at—60 to—50 °C. After stirring at -50 °C for 0.5 hour, the reaction was quenched by adding sat. aq. NH4CI (700 mL) while controlling the temperature between -60 to -30 °C. The suspension was later warmed to 10-25 °C and filtered and the filter was washed by MTBE (500 mL). The organic layer of the filtrate was collected and the aqueous layer was extracted with MTBE (500 mL). The combined organic layers were concentrated under vacuum to give the crude Ilia' as a black oil (245 g, 43.6% HPLC purity), which was purified by column chromatography on silica gel (EtOAc/n- heptane= 1 :8) to give Ilia' (52.5 g, yield: 36%, 96.2 % HPLC purity, Z/E ratio= 98.3: 1.7) as a yellow oil. Example 5 - Preparation of Illb'
The preparation of nib' from la'
Figure imgf000071_0001
[0144] To a solution of Ilia' (1.2 g, 2.7 mmol) in dry DCM (5 mL) was added TFA (5 mL) at 0 °C. The resulting brown solution was stirred at this temperature for 1 h and the solvent was removed under reduced pressure. The residue was redissolved in DCM (10 mL), washed with aq. sat. NaHC03, dried over Na2S04, filtered and concentrated under vacuum to get Illb' (860 mg, yield: 92%) as a brown oil, which was used directly without any purification. 5H NMR (400 MHz, CDC13) δ 6.92 (s, 1H), 6.45 (s, 1H), 5.42 (t, 6.0 Hz, 1H), 3.80 (brs, 21 1). 3.58 (t 6.8 Hz, i l l). 2.66 (s, 3H), 2.41 2.34 (in, 2H), 2.02 (s, 3H), 1.21 (s, 3H).
The preparation of Illb' from Die'
Figure imgf000071_0002
[0145] To a solution of Hie' (200 mg, 0.43 mmol) in dry DCM (13 mL) was added anisoie (110 mg, 1 mmol) and 0.2 N CF3SO3H (13 mL) at 0 °C. The resulting dark brown solution was stirred at this temperature for 1.5 h and aq. sat. Na2C03 was added slowly to quench the reaction. The organic layer was separated, and the aqueous layer was extracted with DCM (10 ml *2). The combined organic layers were washed with brine, dried over Na2S04, filtered and concentrated under vacuum. The residue was purified by column chromatography on silica gel using (eluent: DCM/MeOH= 20: 1) to give Illb' (150 mg, yield: 85%) as a brow oil. 1H NMR (400 MHz, CDCI3) δ 6.94 (s, 1 1 1). 6.49 (s, i l l). 5.45 (t, ./ 6.0 Hz, ! ! !}. 3.86-3.80 (brs, 2H), 3.60 (t ../ 6.8 Hz, 2.68 (s, 3H), 2.41-2.38 (in, 2H), 2.05 (s, 3H), 1.24 (s, 3H).
The preparation of IIIb'»HCl from Ilia'
Figure imgf000072_0001
[0146] Ilia' (100 mg, 0.22mmol) was dissolved in 6 N HC1 in MeOH (5 mL) at 0 °C, and the resulting solution was stirred at room temperature for 2 h. After the reaction was complete, the solvent was removed under reduced pressure to give the desired IIIb IQ (79 mg, yield 92%) as a brown solid.
iLxampie o - Preparation o
Preparation of XiVb'
Figure imgf000072_0002
XiVax XiVb'
[0147] To a solution of the mono-protected amine XiVax (6 g, 19.5 mmol) in THF (50 mL) was added NaHMDS (25 mL, 25 mmol) at -78 °C. The mixture was stirred at this temperature for 30 minutes then (Boc)20 (5 g, 23 mmol) was added. The mixture was warmed to room temperature and stirred overnight. After TLC analysis (petroleum ether /EtOAc= 5; 1 ) showed the reaction was complete, water was added to quench the reaction and was diluted with EtOAc and water. The organic layer was separated and the aqueous layer was extracted with EtOAc (50 mL x2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated in vacuum to give the crude product, which was purified by column chromatography on silica gel to give XI W ( yield: 89%, two steps) as a yellow oil.
Figure imgf000073_0001
XiVb" [0148] To a solution of the compound XiVb' (6.3 g, 15.4 mmol) in THF/t-BuOH 'H20
(1/1/0.1, 100 mL) was added NMO (4.34 g, 50% aqueous solution, 18.5 mmol) and GsG4 (3.9 mL, 1 g in 50 mL i-BuOH) at 0 °C. The mixture was warmed up to room
temperature and stirred for 18 h. After TLC analysis (petroleum ether/EtOAc= 1 : 1) showed the reaction was complete, the reaction was quenched with aq. sat. NaHS0 (40 mL) and H20 (100 mL) at 0 °C and was stirred for 30 minutes. The mixture was extracted with MTBE (50 mL *4) and the collected organic layer was washed with brine (50 mL x2), dried over Na2S04 and concentrated to give the crude product XXIb' (15 g).
[0149] To a solution of XXIb' (crude from 15.4 mmol of XiVb') in H IF W O (1/1, 80 mL) was added NaI04 (7.9 g, 37 mmol) at 0 °C and stirred for 40 minutes. After TLC analysis (petroleum ether/EtOAc= 2: 1) showed the reaction was complete, the reaction was quenched with water (200 mL). The mixture was extracted with EtOAc (50 mL x4) and the collected organic layers were washed with brine (50 mL x3), dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by flash column chromatography (petroleum ether/EtO Ac= 2: 1) to give the aldehyde XVb' (4.06g, yield: 64% over two steps) as a yellow oil. 1H NMR (400 MHz, CDC13) 9.807 (s, 1H), 6.948 (s, 1H), 6.362 (s, 1H), 5.386 (t, J= 7:2 Hz, 1H), 3.251-3.089 (m, 2H), 2.709 (s, 3H), 2.084 (s, 3H), 1.482 (s, 1 81 1 ).
Figure imgf000073_0002
10150] To a suspension of ethyltriphenylphosphonium iodide (8.36 g, 20 mmol) in THF (170 mL) was added M-BuLi (8 mL, 2,5 M, 20 mmol) at 17 °C under N? to form a red solution. The mixture was added to a solution of I2 (5.08 g, 20 mmol) in THF (130 mL) dropwise at -75 to -80 °C to form a yellow suspension. The solution was stirred at -75 °C for 5 minutes and was warmed to -20 °C. NaHMDS (9.35 mL, 2 M, 18.7 mmol) was added dropwise to form a red solution and the solution was stirred for 5 minutes. To this solution was added a solution of XVb' (4.06 g, 10 mmol) in THF (5 mL) dropwise and stirred at -20 to 10 °C for 1 h. After TLC analysis (Petroleum/EtOAc= 2: 1) showed that the reaction was complete, the reaction mixture was filtered through a pad of diatomaceous earth, concentrated and purified by column chromatography
(Petroleum/EtOAc= 5: 1) to give the product Hid' (2.2 g, yield: 40%) as a yellow oil !H
NMR (400 MHz, CDCI3) 6.93 (s, 1 H), 6.46 (s, 1 H), 5.48 (t, ./ 6.4, H I). 4.92 (dd, ./ 9, 6.2 Hz, 1H), 2.88 (m, IH), 2.74 (ni, 1H), 2.70 (s, 3H), 2.48 (m, 2H), 2.03 (s, 3H), 1.46
(s, 18H).
Example 7— Preparation of Ille'
The preparation of compound XIV
Figure imgf000074_0001
[0151] To a solution of Xlla (9.6 g, 30 mmol) in DCM (90 mL) was added w-CPBA (7.4 g, 70%, 30 mmol) at 0 °C in portions. The resulting mixture was stirred at room temperature overnight before the reaction was quenched with aq. sat. Na2S03 (120 mL). The organic layer was separated and the aqueous layer was extracted with DCM (60 ml x2). The combined organic layers were washed with brine, dried over Na2S04, filtered and concentrated under vacuum. The residue was purified by column chromatography on silica gel (petroleum ether EtOAc= 20: 1) to give XiVe' (8.9 g, yield: 87%) as a yellow oil. I I NMR (400 MHz, CDCi3) δ 6.903 (s, I H), 6.412 (s, I H), 5.758-5.654 (m, ! ! ! }. 5.099 (t, 2H), 4.578 (d, ./ 9.2 Hz, i l l ). 4.039 (dd, ,/ 15.6, 6.5 Hz, IH), 2.658 (s, 3H), 2.499-2.379 (m, 2H), 2.050 (s, 3H), 1.327 (s, 9H).
The preparation of X Ve'
Figure imgf000075_0001
[0152] To a solution of XlVe' (1.7 g, 5.2 mmol) in T! IF /-BuOI ! I U) (1 : 1 :0.1 , 50 mL) was added NMO (1.5 g, 50% aq. solution, 6.2 mmol) and Os04 (1.3 mL, 0.104 mmol, 1 g in 50 mL t-BuOH) at 0 °C and the mixture was stirred at 23 °C for 18 h. After TLC analysis (Petroleum/EtOAc= 1 : 1) showed that the reaction was complete, the reaction was quenched with aq. sat. NaHSO-j (15 mL) and H20 (40 mL) at 0 °C and the mixture was stirred for 30 minutes before it was extracted with EtOAc (50 mL x4). The collected organic layers were washed with brine (50 mL x2), dried over Na2S04 and concentrated to give the crude product XXIe' (6 g).
[0153] To a solution of XXIe' (crude, 6 g, 5.2 mmol) in THF/H20 (1 : 1, 80 mL) was added NaI04 (7.91 g, 37 mmol) at 0 °C and the mixture was stirred for 60 min. After TLC analysis (Petroleum/EtOAc= 1 : 1) showed that the reaction was complete, the reaction was quenched with H20 (60 mL) and the mixture was extracted with EtOAc (50 mL x4). The collected organic layers were washed with brine (50 mL x3), dried over Na2S04, concentrated and purified by column chromatography through a short pad of silica gel (Petroleum/EtOAc= 1 : 1 ) to give the product XVe' (1.3 g, yield: 76%). lH NMR (400 MHz, CDCI3) δ 9,697 (s, I H), 6,91 5 (s, I H), 6,488 (s, IH), 5.415 (d, ./ 9,2 Hz, IH), 4.477 (dd, ./ 15.6, 6,8 Hz, 1 1 1 ). 2.872-2.730(m, 2H), 2.625 (s, 3H), 2.061 (s, 3H), 1.300 (s, 9H).
The preparation of Hie'
Figure imgf000076_0001
[0154] To a suspension of ethyltriphenylphosphonium iodide (3.3 g, 7.88 mmol) in THF (60 mL) was added M-BuLi (3.2 mL, 2,5 M, 7.88 mmol) at 17 °C under N2 to form a red solution. The mixture was added to a solution of I2 (2 g, 7.88 mmol) in THF (45 mL) dropwise at -75 to -80 °C to form a yellow suspension, which was stirred at -75 °C for 5 min. Then the mixture was warmed to -20 °C and NaHMDS (3.7 mL, 2 M, 7.37 mmol) was added dropwise to form a red solution, which was stirred for another 5 mm. To this solution was added a solution of XVe' (1.3 g, 3.94 mmol) in THF (5 mL) dropwise and stirred at -20 to 10 °C for 1 h. After TLC analysis (Petroleum ether/EtOAc= 2: 1) showed that the reaction was complete, the reaction mixture was filtered through a pad of diatomaceous earth, concentrated and purified by column chromatography on silica gel (Petroleum ether/EtOAc= 5: 1) to give the product Hie' (730 mg, yield: 35%) as a colorless oil. Ί Ι NMR (400 MHz, CDCI3) 6,96 (s, I I I ). 6,47 (s, I I I). 5.48 (t, ,/ 6 Hz, 1H), 4.14 (m, 2H), 2.71 (s, 3H), 2.51 (m, 5H), 2.12 (s, 3H), 1.37 (s, 9H).
Figure imgf000076_0002
[Θ155] To a solution of benzophenone (1.56 g, 8.6 mmol) in DME (50 mL) was added Illb' (1.5 g, 8.6 mmol) and Et3N (3.6 mL, 25.8 mmol) at room temperature. The mixture was cooled to -78 °C and TiCl4 (8.6 mL, 8.6 mmol, 1 N in DCM) was added. The resulting mixture was allowed to warm to room temperature and stirred overnight. After TLC analysis indicated the reaction was complete, H20 (50 mL) and EtOAc (200 mL) was added and the layers were separated. The aqueous layer was extracted with EtOAc (100 mL x2) and the combined organic layers were washed with aq. sat. NaHC03 (50 mL x3) and brine (50 mL x3), dried over Na2S04, filtered and concentrated under vacuum. The residue was purified by column chromatography on silica gel to give flic' (890 mg, yield: 50%) as a yellow oil. lH NMR (400 MHz, CDC13) <J7.67-7.65 (m, 2H), 7.43-7.42 (m, 3H), 7.39-7.30 (m, 3H), 7.15-7.13 (m, 2H), 6.91 (s, i ! i ). 6.42 (s, 1 1 1 ). 5.34 (t, ./ 6 Hz, 1H), 4.02 (t, ./ 6,4 Hz, I H), 2.70 i s. 31 1 ). 2.53 (m, 2H), 2,44 (s, 31 1 ). 2, 16 (s, 3H); 13C NMR (100 MHz, CDC13) 166.9, 164,3, 153.2, 142.0, 139.9, 136.8, 132,3, 130.1, 129.9, 128,7, 128.4, 128.3, 128.0, 127,8, 1 19.5, 1 15.2, 102,3, 68.9, 42.3, 33,7, 19.2, 15.8,
Example 9 - Preparation of XXVax
Figure imgf000077_0001
[0156] To a solution of compound XlXa' (15.0 g, 30 mmol, Rf= 0.5, EtOAc/petroieum ether= 1 : 3, KMn04) in dry DCM (87 mL) was added 1 N T1CI4 (6.26 g, 33 mmol) in DCM (33 mL) at -78 °C and after 10 minutes, DIPEA (5.46 mL, 33 mmol) was added. The resulting mixture was stirred at -78 °C for another 1 h, then the solution of XX (4.4 g, 45 mmol) in DCM (13 mL) was added dropwise. The reaction mixture was slowly warmed up to room temperature over 3 h. After TLC analysis indicated the reaction was complete, aqueous phosphate buffer solution (43.6 mL, 2 N, pH= 7.0,
NaH2P04/Na2HP04) was added to quench the reaction. The organic layer was separated, and the aqueous was extracted with EtOAc (100 mL *4). The combined orgamcs were dried, filtered and concentrated under vacuum. The residue was purified by column chromatography on silica gel (EtO Ac/petroleum ether:= 1 : 10, KMn04) to give XXIIa'
(13.5 g, yield: 75%, dr. up to 5: 1 , Rf 0,4, EtOAc/petroleum ether- 1 :3, KMn04) as a colorless oil. 1H NMR (400 MHz, CDC33) δ 5.787-5,683 (m, IH), 5.040-4.945 (m, 2H), 4.620 (t, J= 4,4 Hz, l i s ). 3.807 (dd, ./ 7.6, 4.8 Hz, I H), 3,499 (s, I H), 3,42 (q, ./ 13,6 Hz, 2H), 3.275 (d, ,/ 9.6 Hz, I I I). 3.195 (q, ./ 7.2 Hz, lH), 2.764 (d, ./ 4.4Hz, 2H), 2.475 (dd, 13.6, 1.2 Hz, IH), 2.130-2.102 (m, IH), 2.023 (dd, ./ 13.6, 7.6 Hz, 1 1 1). 1.901-1.801 (m, 4H), 1.619-1.550 (m ,1H), 1.384-1.272 (m, 2H), 1.153 (s, 3H), 1.1 15 (s, 3H), 1.102 (s, 3H), 1.011 (d, ./ 6.8 Hz, 3H), 0.925 (s, 3H), 0.814 (s, 6H), 0.804 (s, 3H), 0.781 (d, ./ 6.8 Hz, 3H), 0.063 (s, 3H), 0.014 (s, 3H); J 3C NMR (100 MHz, CDC13) δ 221.7, 169.6, 137.0, 116.3, 74.3, 71.2, 65.5, 53.8, 52.9, 48.4, 47.7, 44.7, 41.2, 40.9, 38.5, 37.3, 35.1, 33.0, 26.4, 26.0, 22.2, 20.7, 19.9, 19.5, 18.1, 15.0, 9.7, -4.3, -4.9.
The procedure for the preparation of XXIIa is the same as XXIIa'. Preparation of Ilax'
Figure imgf000078_0001
[0157] To a solution of XXIIa' (13.5 g, 22.5 mmol, Rf= 0.4, EtOAc/petroleum ether= 1 :3, KMnOi) in dry DCM (200 mL) was added 2,6-lutidme(7.2 g, 67.5 mmol) at ~60 °C. After stirring for 20 min, TBSOTF (12 g, 45 mmol) was added at this temperature and the resulting mixture was stirred at room temperature overnight. After TLC analysis indicated the reaction was complete, aq. sat. M LCI (300 mL) was added to quench the reaction. The organic layer was separated and the aqueous was extracted with DCM (200 mL x2). The combined organic layers were dried over Na2S04, filtered and concentrated under reduced pressure. The residue was purified by column chromatography on silica gel to give Ilax' (16 g, yield: 100%, dr. up to 5: 1, R = 0,8, EtOAc/petroleum ether= :3, KMn04) as a white solid. M P 1 16-118 °C; ; H NMR (400 MHz, CDC13) δ 5.768- 5.667 (m, I H), 5.007-4.949 (m, 2H), 4.682 (brs, ! ! !}. 3,869-3.817 (m, 21 1). 3.724-3.709 (m, I H), 3,428 (q, ./ 14 Hz, 21 1). 3.172-3.096 (m, IH), 2.773 (d, ./ 5.2 Hz, 2H), 2,252- 2.148 (m, 2H), 2.072 (dd, ,/ 13.6, 8 Hz, IH), 1.932-1.802 (m, 41 1). 1.404- 1.315 (m, 3H), 1.235 (s, 3H), 1.148 (s,3H), 1,083 (s, 3H), 0,955 (s, 3H), 0,901 (s, 12H), 0.853 (s, 6H), 0.833 (s, 3H), 0.098 (s, 3H), 0.061 (s, 6H), 0.004 (s, 3H); f 3C NMR (100 MHz, CDCl3) f5 217.9, 169.7, 137.9, 115.6, 78.0, 71.0, 70.4, 65.5, 53.7, 52.9, 48.4, 47.7, 45.7, 44.8, 41.8, 41.0, 39.6, 38.6, 37.6, 34.9, 26.3, 26.1, 23.6, 20.8, 19.9, 19.6, 18. 18.2, 16.5, 16.1, 13.0, -3.4, -3.6, -4.2, -4.8.
Figure imgf000079_0001
[0158] To a solution of XXIIa (2.08 g, 3.5 mmol) in dry DCM (30 mL) was added 2,6- lutidine (1.13 g, 10.5 mmol) at -60 °C and then TBSOTf (1.8 g, 7 mmol) after 20 min. The resulting mixture was stirred at room temperature overnight. After TLC analysis indicated the consumption of XXIIa, aq. sat. NH4CI solution (30 mL) was added to quench the reaction. The organic phase was separated and the aqueous was extracted with DCM (20 mL- x2). The combined organic layers were dried over Na2S04, filtered and concentrated to afford a residue which was purified by column chromatography on silica gel (petroleum ether. EtOAc= 10/1) to give Ilax (2.38 g, yield 96%) as a yellow oil.
Figure imgf000079_0002
[0159] A solution of 1 M TiCLj in DCM (123.5 mL, 123.5 mmol) was added dropwise to a stirred solution of XlXa' (41. 5 g, 82.3 mmol) in DCM (823 mL) over 0.5 hour under N2 atmosphere while maintaining the solution temperature at -75 °C. The reaction mixture was stirred for 0.5 hour before DIPEA (20.4 mL, 123.4 mmol) was slowly added. After the resulted dark red solution was stirred for another hour, a solution of XX (32.32 g, 329.3 mmol) in «-heptane (600 mL) was added over 1 hour at -75 °C. The resulting mixture was stirred at that temperature for 2 hours and was warmed to 0 °C, followed by stirring for another 0.5 hour. When the reaction was complete as judged by TLC (EtOAc/w-heptane= 1 :4), the reaction was quenched by adding an aqueous phosphate buffer solution (pH= 7.0, 496 mL, 2 N prepared from NaH2P04 and Na2HP04) at 10 °C and stirred for 0.5 hour. The organic layer was collected and the aqueous layer was extracted with EtOAc (450 mL 2). The combined organic extracts were washed with sat. aq. NaHC03 (450 mL) and 20% aq. NaCi (450 mL), dried over MgS04 (20 g), filtered and concentrated in vacuo to give the crude XXIIa' (d.r.= 86: 14), which was used directly for the next step without purification.
[0160] The crude XXIIa' from the above was dissolved in DCM (1029 mL) and sequentially treated with 2,6-iutidine (38.3 mL, 328.8 mmol) and TBSOTf (47.3 mL, 206.0 mmol) under N2 atmosphere while maintaining the solution temperature at <~73 °C. The reaction mixture was stirred at 25 °C for 2 hours and then quenched by adding 10% aq. citric acid (1275 mL) after the reaction was complete as judged by TLC (EtOAc/«-heptane= 1 :8). The organic layer was collected and the aqueous layer was extracted with DCM (600 mL). The combined organic extracts were washed with 20% aq. NaCl (900 mL), dried over MgS04 (20 g), filtered and concentrated to ca. 620 mL. The solvent was swapped by MeOH (600 mL x3) to obtain the crude Ilax' suspended in MeOH (ca. 600 mL), which was heated to 65-70°C for dissolution. The clear solution was gently cooled and kept at 57 °C for 0.5 hour before it was further cooled to 25 °C. After 2 hours at 25 °C, the resulted suspension was filtered and the solids were washed with MeOH (205 mL) to give the pure Ilax' as a pure white solid (35.55 g, yield: 61 %, </./·. 99.2:0.79, MP. 141-142 °C).
Preparation of XXIVax
Figure imgf000080_0001
|Ό161] To a solution of Ilax' (16 g, 22.5 mmol, Rf= 0.6, EtO Ac/petroleum ether== 1 :5, KMn04) in THF/MeOH/H20 (104 mL/17.2 mL/25.9 mL) was added LiOH/H20 (3.8 g, 89.9 mmol) and 30% H202 (25.5 g, 225 mmol) at 0 °C. The resulting mixture was stirred at room temperature overnight. The reaction was quenched with sat. aq. NaHS03 ( 95 mL) and the aqueous was extracted with EtO Ac (100 mL x3). The combined organic layers were dried, filtered and concentrated under reduced pressure. The residue
(XXIVax, Rf= 0.3, EtO Ac/petroleum ether= 1 : 5, KMn04) was used directly in the next step without further purification.
Figure imgf000081_0001
[0162] To a solution of compound XXIVax (16 g, 31.1 mmol, crude, Rf= 0.3, EtO Ac/petroleum ether= 1 :5, KMn04) m DMF (59 mL) was added SEMC1 (5.9 mL, 34.2 mmol) and DMAP (0.40 g, 3.11 mmol) at room temperature. The mixture was cooled to 0 °C and Et N (5.9 mL, 46.6 mmoi) was added. The mixture was warmed up to room temperature and stirred overnight. After TLC analysis (petroleum ether/EtO Ac= 5: 1) showed the reaction was complete, the mixture was diluted with EtOAc (100 mL) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (50 mL x2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated under reduced pressure to give the product, which was purified by column chromatography on silica gel (petroleum ether/EtOAc= 80: 1 ) to give compound XXVax (9.4 g, yield: 64.7% for two steps, Rf= 0.9, EtO Ac/petroleum ether= 1 :5, KMn04) as a colorless oil. 1H NMR (400 MHz, CDC13) δ 5.77-5,66 (m, 1H), 5.26 (q, ,/ 10.4, 6.4 Hz, 2H), 5,00-4.95 (m, 2H), 4,58-4.39 (m, I I I ). 3,85-3.78 (dd, ,/ 18.4, 7.6 Hz, I I I ). 3 ,69 (t, 1 8.8 Hz, 2H), 3.20-3,08 (m, 1H), 2.51-2,41 (m, i l l ). 2.36-2,21 (m, 1 H), 1.88-1.79 (m, 1H), 1.24 (s, 3H), 1.07-1.04 (m, 6H), 0.97-0.84 (m, 25H), 0.09- 0.01 (m, 21H). Example 10 - Preparation of Block Preparation of IVax'
Figure imgf000082_0001
[0163] To a stirred solution of compound Hax' (2.44 g, 3.426 mmol) in TIIF (17,0 mL) was added 9-borabicyclo[3.3. ljnonane (9-BBN; 13.70 mL, 6.582 mmol, 0.5 M in THF) at room temperature. The reaction mixture was stirred at room temperature for 3 h. After the reaction was complete, as judged by TLC («-heptane/EtOAc= 4: 1), water (0.70 mL) was added and the mixture was stirred for another 30 min. The resulting borane solution was transferred to a mixture of compound Ilia' (1.00 g, 2.230 mmol), Pd(dppf)Cl2 (82 mg, 0.112 mmol) and CS2CO3 (2.23 g, 6.582 mmol) in DMF (13.0 mL). The reaction mixture was stirred at 50 °C overnight. After the reaction was complete, as judged by TLC («-heptane/EtOAc= 4: 1), the reaction mixture was diluted with EtOAc (60 mL) and water (60 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (60 mL x2). The combined organic layer was washed with brine, dried over MgS04 and concentrated in vacuo. The residue was purified by column chromatography on silica gel (eluent:
Figure imgf000082_0002
0.24 for //-heptane hiOAc 4: 1) as a white foam. ¾ NMR (400 MHz. CDCI3) δ 6.90 (s, IH), 6.43 (s, H i). 5.27 (q, 2H), 5,09 (t, 8.0 Hz, H i). 4.64-4,55 (m, i l l). 4.38 (brs, i l l). 4, 14-4.11 (111, H), 3,83-3.74 (dd, J= 28.4, 6.8 Hz, H), 3,69 (t, J= 8.0 Hz, 2H), 3.16- 3.07 (m, IH), 2.7 is. 3H), 2.52-2.26 (m, 4H), 2, 17 (s, H), 2,04 (s, 3H), 1 ,99-1.97 (m, 2H), 1.67 (s, 3H), 1.42 (s, 9H), 1.24 (s, 3H), 1.05-1 ,03 (m, 6H), 0.97-0.85 (m, 251 1). 0.09-0,01 (m, 2 H i); I .C.MS 1034.6 j M i i ] . 1034.4 | M H j \
[0164] To a mixture of Ilax' (9.25 g, 12.988 mmol) and 9-borabieyelo[3.3. ljnonane dimer (2, 19 g, 8.974 mmol) was added THF (90.0 mL) at room temperature. The reaction mixture was stirred at room temperature for 3 h and after the reaction was complete, as judged by TLC («-heptane/EtOAc= 4: 1), the mixture was added water (1.16 mL) and was stirred for another 30 min. The resulting borane solution was transferred to a mixture of compound Ilia' (4.48 g, 9.992 mmol), Pd(dppf)Cl2 (365 mg, 0.499 mmol) and Cs2C03 (9.77 g, 29.986 mmol) in DMF (58.0 mL). The reaction mixture was stirred at 50 °C for 1 h. After the reaction was complete, as judged by TLC («-heptane/EtOAc= 4: 1), the reaction mixture was poured into a mixture of ethyl acetate (200 mL) and water (200 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (200 mL x2). The combined organic layers were washed with brine, dried over MgS04 and concentrated in vacuo. The residue was purified by column chromatography on silica gel («-heptane EtOAc= 6: 1) to give IVax' (9.58 g, yield: 93%, R = 0.24, «- heptane/EtOAc= 4: 1) as a white foam.
Figure imgf000083_0001
[0165] To a solution of compound XXIIa' (280 mg, 0.47 mmol) in THF (2.4 mL) was added 9-borabicyclo[3.3.1]nonane (1.89 mL, 0.94 mmol, 0.5 M in THF) at room temperature under an atmosphere of N2. The mixture was stirred at room temperature for 2 h. After TLC analysis (petroleum ether/EtOAc= 3: 1) showed the reaction was complete, water (0. mL) was added to quench the reaction and the mixture was stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound Ola' (100 mg, 0.22 mmol), Pd(dppf)Cl2 (8 mg, 0.011 mmol) and Cs2C03 (215 mg, 0.66 mmol ) in DMF (1.3 mL) at 50 °C. The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at 50 °C for 5 h. After TLC analysis (petroleum ether/EtOAc= 3: 1 ) showed the reaction was complete, the mixture was diluted with EtOAc (5 mL) and water (5 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (5 mL *2). The combined organic layer was washed with brine (5 mL *3), dried over Na?S04 and concentrated in vacuo to give the crude product, which was purified by column chromatography on silica gel to give compound XXVIlax' (120 mg, yield: 58.5%) as a colorless oil. 1H NMR (400 Ml i/.. CDCI3) δ 6.88 (s, 1H), 6.40 (s, i l l ). 5.05 ( I. J= 8.0 Hz, I I I ). 4.68 (brs, 1 1 1 ). 4.63 (s, 1 1 1 ). 3.81 (t, ./ 5.2 Hz, 3H), 3.52-3.37 (m, 3H), 3.28-3.20 (m, 2H), 2.77 id. J= 2.8 Hz, 2H), 2.67 (s, 31 1 ). 2.31-2.05 (m, 4H), 2.01 (s, 9H), 1.86-1.83 (m, 4H), 1.64 (s, 3H), 1.39 (s, 9H), 1.30-1.28 (m, 2H), 1.17 (s, 3H), 1.12 (s, 3H), 1.11 (s, 3H), 1.01 (d, J= 6.4 Hz, 3H), 0.94 (brs, 1H), 0.93 (s, 3H), 0.824(s, 9H), 0.79 (d, ./ 4.0 Hz, 3H), 0.073 (s, 3H), 0.004 (s, 3H); f 3C NMR (100 MHz, CDCI3) δ 221.8, 171.2, 169.8, 164.3, 155.4, 153.2, 140.2, 138.8, 120.1 , 118.7, 1 15.3, 79.3, 74.9, 71.3, 65.6, 60.4, 53.9, 53.0, 48.5, 47.8, 45.3, 44.8, 41.4, 41.1, 38.6, 38.4, 35.5, 32.6, 33.1, 32.1 , 32.8, 32.5, 32.1 , 28.5, 26.5, 26.1 , 25.1, 23.6, 22.4, 21.1, 20.8, 20.0, 19.5, 19.3, 18.2, 15.5, 14.3, 9.8, -4.2, -4.8.
Preparation of IVbx
Figure imgf000084_0001
[0166] To a solution of compound XXVax (1.06 g, 1.65 mmol) in THF (14 mL) was added 9-borabicyclo[3.3.1]nonane (6.6 mL, 3.3 mmol) at room temperature. The mixture was stirred at room temperature for 1 h, and after TLC analysis (petroleum ether/EtOAc= 5: 1 ) showed the reaction was complete, the reaction mixture was added water (0.9 mL) and stirred for another 30 minutes. The resulting borane solution was transferred to a mixture containing compound Illsi' (0.6 g, 1. 1 mmol), (dppf)PdCl2 (0.16 g, 0.22 mmol), AsPh3 (0,067 g, 0.22 mmol) and Cs2C03 (1.1 g, 3,3 mmol) in DMF (10 mL). The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at room temperature for 30 minutes. After TLC analysis (petroleum ether/EtOAc= 5: 1 ) showed the reaction was complete, the mixture was diluted with EtOAc (50 mL) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL *2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated i vacuum to give the product, which was purified by column chromatography on silica gel to give compound IVbx ( 1.04 g, yield: 88.9%) as a colorless oil. fH NMR (400 MHz, CDCI3) δ 6.90 (s, I H), 6.48 (s, ! ! ! }. 5.26 (q, 2H), 5.12 (t, ./ 8.0 Hz, I H), 4.79-4.76 (m, I H), 4.38 (brs, IH), 3.84-3.74 (m, IH), 3.69 (t, 8.4 Hz, 2H), 3.17-3.11 (m, IH), 2.87-2.79 (m, IH), 2.7 (s, 3H), 2.54-2.48 (m, 2H), 2.28 (dd, ./ 16.8, 6.8 Hz, IH), 2.19-2.09 (m, 2H), 2.02 (s, 3H), 1.91-1.86 (m, IH), 1.66 (s, 3H), 1.61 (d, ./ 4.4 Hz, IH), 1.45 (s, 18H), 1.25 (s, 3H), 1.07-1.02 (m, 6H), 0.97-0.85 f ro. 25H), 0.09-0.01 (m, 21H). Preparation of IVcx
Figure imgf000085_0001
[0167] To a solution of compound XXVax (1.28 g, 2.6 mmol) in THF (17 mL) was added 9-borabicyclo[3.3.1 ]nonane (8 mL, 4 mmol) at room temperature. The mixture was stirred at room temperature for 1 h. After TLC analysis (petroleum ether EtOAc= 5: 1) showed the reaction was complete, the mixture was added water (1.1 mL) and stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound Ilia' (0.6 g, 1.34 mmol), (dppf)PdCl2 (0.2 g, 0.27 mmol), AsPh3 (0.083 g, 0.27 mmol) and Cs2C03 (1.3 g, 4.0 mmol) in DMF (10 mL). The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at room temperature for 30 min. After TLC analysis (petroleum ether/EtOAc= 5: 1) showed the reaction was complete, the mixture was diluted with EtOAc (50 mL) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL x2). The combined organic layers were washed with brine, dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by column chromatography on silica gel to give compound IVcx (1.1 g, yield: 85.3%) as a pale yellow oil. lB NMR (400 MHz, CDCI3) δ 6,90 (s, I H), 6,43 (s, I H), 5,27 (q, 2H), 5.09 (t, ./ 8.0 Hz, I H), 4,64-4.55 (m, I H), 4,38 (brs, I H), 4, 14-4.1 1 Or, IH), 3.83-3.74 (dd, J= 28,4, 6.8 Hz, IH), 3.69 (t, J= 8,0 Hz, 2H), 3.16-3.07 (m, IH), 2.7 (s, 31 1 ). 2.52-2.26 (m, 4H), 2.17 (s, Hi), 2.04 (s, 3H), 1.99-1.97 (m, 2H), 1.67 (s, 3H), 1.42 (s, 9H), 1.24 (s, 3H), 1.05-1.03 (m, 6H), 0.97-0.85 (m, 25H), 0.09-0.01 (m, 21H).
Preparation of IVcx
Figure imgf000086_0001
[0168] To a solution of compound XXVax (165 mg, 0.255 mmol) in THF (2 raL) was added 9-borabicyclo[3.3.1.]nonane (1.1 mL, 0.55 mmol) at room temperature. The mixture was stirred at room temperature for 1 h and after TLC analysis (petroleum ether/EtOAc= 5: 1) showed the reaction was complete, the mixture was added water (0.2 mL) and stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound 111b' (60 mg, 0.17 mmol), (dppf)PdCl2 (1.25 mg, 0.0017 mmol), (Boc)20 (45 mg, 0.2 mmol) and CS2CO3 (170 mg, 0.52 mmol) in DMF (2 mL) at 50 °C. The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at 50 °C for 2 h. After TLC analysis (petroleum ether/EtOAc= 5: 1) showed the reaction was complete, the mixture was diluted with EtOAc (5 mL) and water (5 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (5 mL x2). The combined organic layers were washed with brine, dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by preparative- TLC to give compound IVcx (130 mg, yield: 79%) as a colorless oil.
Preparation of IVdx
Figure imgf000086_0002
[0169] To a solution of compound XXVax (2.0 g, 4.06 mmol) in THF (26.5 mL) was added 9-borabicyclo[3.3. Ijnonane (12.5 mL, 6.24 mmol) at room temperature. The mixture was stirred at room temperature for 1 h. After TLC analysis (petroleum ether/EtOAc= 5: 1) showed the reaction was complete, the mixture was added water ( 1.7 mL) and stirred for another 30 mm. The resulting borane solution was transferred to a mixture containing compound IHb' (0.6 g, 1.73 mmol), (dppf)PdCl2 (0.256 g, 0.35 mmol), AsPh3 (0.107 g, 0.35 mmol) and (VCO-, (1.7 g, 5.19 mmol) m DMF (10 mL). The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at room temperature for 30 min. After TLC analysis (petroleum ether EtOAc= 5: 1) showed the reaction was complete, the mixture was diluted with EtOAc (50 mL) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL x2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by column chromatography on silica gel to give compound IVdx (0.9 g, yield: 60%) as a dark brown oil. ¾H NMR (400 Mi l/. CDC13) δ 6,91 (s, 1 1 1 ). 6.50 (s, 1 1 1 ). 5.27 (q, 2H), 5.13 (t, ./ 6.8 Hz, I I I ). 4,38 (brs, 1 1 1 ). 3.84-3.74 (dd, ,/ 28.8, 7.2 Hz, i l l ). 3.69 (t, 8.4 Hz, 2H), 3.41 (t, J= 6.0 Hz, 1H), 3.16-3,08 (m, IH), 2.70 (s, 3H), 2.50-2,48 (m, IH), 2.41-2.16 (m, 5 H), 2.03 (s, 3H), 1.99-1 ,97 (m, 2H), 1.68 (s, 3H), 1 .65-1.61 (m, 21 1 ). 1.48-1 ,38 (nr. 3H), 1.24 (s, 3H), 1.07-1 ,03 (m, 6H), 0.97-0.85 (m, 251 1 ). 0.09-0.01 (m, 21H).
Figure imgf000087_0001
[0170] To a solution of compound XXVax (150 mg, 0.23 mmol) in THF (1.5 mL) was added 9-borabicyclo[3.3.1 ]nonane (0.93 mL, 0.46 mmol) at room temperature. The mixture was stirred at room temperature for 1 h. After TLC analysis (petroleum ether/EtOAc= 5: 1 ) showed the reaction was complete, the mixture was added water (0.1 mL) and stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound IiIb'»HCI (60 mg, 0.156 mmol), (dppf)PdCl2 ( 5.7 mg, 0.0078 mmol), and Cs2C03 (305 mg, 0.936 mmol) in DMF (1.5 mL) at 50 °C. The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at 50 °C overnight and was then diluted with EtOAc (5 mL) and water (5 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (5 mL x2). The combined organic layers were washed with brine, dried over Na2S04 and concentrated under vacuum to afford the crude product, which was purified by preparative- TLC to give compound lVdx (64 mg, yield: 50%) as a yellow oil.
Figure imgf000088_0001
[0171] To a solution of compound XXVax (1.24 g, 1.92 mmoi) in THF (16 mL) was added 9-borabicyclo[3.3.1 ]nonane (7.7 mL, 3.86 mmol) at room temperature. The mixture was stirred at room temperature for 1 h and after TLC analysis (petroleum ether EtOAc= 5: 1) showed the reaction was complete, the mixture was added water (1.1 mL) and stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound Hie' (0.6 g, 1.28 mmol), (dppf)PdCl2 (0.19 g, 0.256 mmol), AsPh3 (0.078 g, 0.256 mmol) and Cs2C03 (1.25 g, 3 ,84 mmol) in DMF (10 mL). The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at room temperature for 30 min and after TLC analysis (petroleum ether/EtOAc= 5: 1) showed the reaction was complete, the mixture was diluted with EtOAc (50 ml.) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL *2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated under vacuum to give the crude product, which was purified by column chromatography on silica gel to give compound IVex (1. 1 g, yield: 87.3%) as a yellow oil. 1H NMR (400 MHz, CD(¾) 6.93 (s, 1H), 6.44 (s, I H), 5.27 (q, 2H), 5.09 (t, ./ 6.8 Hz, 1H), 4.38 (brs, 4.03-3.99 (m, 21 1 ). 3.83-3.75 (dd, ./ 18.4, 7.6 Hz, 1 1 1 ). 3.69 (t, J--- 8.4 Hz, 2H), 3.17-3.08 (m, I H), 2.71 (s, 3H), 2.51-2.38 (m, 3H), 2.32- 2.26 (dd, ./ 17.2, 6.8 Hz, I H), 2, 17 (s, I H), 2.09 (s, 3H), 2.04-1.99 (m, 2H), 1.68 (s, 3H), 1.36 (s, 9H), 1.24 (s, 3H), 1.07-1.01 (m, 6H), 0.97-0.85 (m, 25H), 0.10-0.01 (m, 21H).
Figure imgf000089_0001
|Ό172] To a solution of compound XXVax (1.13 g, 1.76 mmol) in THF (14.8 mL) was added 9-borabicyclo[3.3.1]nonane (7.1 mL, 3.5 mmol) at room temperature. The mixture was stirred at room temperature for 1 h and after TLC analysis (petroleum ether/EtOAc= 5:1) showed the reaction was complete, the mixture was added water (1 mL) and stirred for another 30 min. The resulting borane solution was transferred to a mixture containing compound IHc' (0.6 g, 1.17 mmol), (dppf)PdCl2 (0.17 g, 0.23 mmol), AsPh-j (0.072 g, 0.23 mmol) and CS2CO3 (1.14 g, 3.51 mmol) in DMF (10 mL). The reaction mixture changed from orange red to dark brown solution. The mixture was stirred at room temperature for 30 min. After TLC analysis (petroleum ether/EtOAc= 5:1) showed the reaction was complete, the mixture was diluted with EtOAc (50 mL) and water (50 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (30 mL x2). The combined organic layer was washed with brine, dried over Na2S04 and concentrated under vacuum to give the crude product which was purified by column chromatography on silica gel to give compound IVfx (0.97 g, yield: 80.8 %) as a yellow oil. 1H NMR (400 MHz, CDCI3) δ 7.63 (d, ./ 7.6 Hz, 2H ), 7.41-7,29 (m, 6H), 7.12 (d, J= 6,8 Hz, 211).6.89 is.111).6.32 is.111).5.27 (q, 2H), 4.95 (t, ./ 6,8 Hz, 111).4.37 (brs, 111).3.88 (t, ,/ 6.4 Hz, lis).3.82-3.73 (dd, ./ 27.6, 7.2 Hz, ill).3.70 (t, ./ 8,4 Hz, 2H), 3.16-3,11 (m, 1H), 2.69 (s, 3H), 2,53-2,36 (m, 3H), 2,32-2.26 (dd, ./ 16.4, 6.4 Hz, ill). 2.16 (s, ill).1.99-1.84 (m, 211), 1.60 (s, 3H), 1.36 (s, 9H), 1.24 (s, 3H), 1.08-1.01 (m, 611).0.98-0.85 (m, 251 f).0.09-0.02 (m, 21!!}.
Preparation of XXVIax
Figure imgf000090_0001
[0173] To a stirred solution of IVax' (9.14 g, 8.834 mmol) in a mixture of THF (60,0 mL) and MeOH (15.0 raL) was added 10% aq, LiOH (8.46 mL, 35.336 mmol) at 0 °C, followed by addition of 30% aq. H2O2 solution (5,01 mL, 44.170 mmol). The resulting mixture was warmed up to room temperature slowly and stirred at room temperature overnight. The reaction was quenched by adding sat. aq. NaHS03 (10.94 mL, 44.170 mmol) at 0 °C and the mixture was stirred for another 30 min. The resulting mixture was concentrated in vacuo and the residue was extracted with EtOAc (40 raL) and sat. aq. NH4CI. (40 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (40 raL x2). The combined organic layers were washed with brine, dried over MgS04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (eluent: 2% MeOH/DCM to 5% MeOH/DCM) to give XXVIax (4,44 g, yield: 60%, Rr 0,33, 2% MeOH DCM) as a white foam. Ή NMR (400 MHz, CDCI3) δ 10.92 (brs, 1H), 6.85 (s, 1H), 6.42 (s, 1H), 5.05 (t, J= 8.0 Hz, 1H), 4.71-4.70 (m, 1H), 4.35 (m, 1H), 4.09-4.04 (m, 1H), 3.81-3.72 (m, 1H), 3.11-3.07 (m, 1 1 1). 2.64 (s, 3H), 2.42-2.39 (m, 2H), 2.27-2.22 (m, 3H), 1.97 (s, 3H), 1.96-1.90 (m, 3H), 1.63 (s, 3H), 1.37 (s, 9H), 1.20-1.01 (m, 12H), 0.87-0.85 (d. J 4.0 ! !/. 3H), 0.85 (s, 9H), 0.82 (s, 9H), 0.05-0.01 (3s, 12H); J 3C NMR (100 MHz, CDCI3) δ 217.7, 176.0, 164.7, 152.8, 140.4, 138.4, 120.3, 1 15.0, 53.7, 53.6, 44.9, 40.0, 39.1, 39.0, 38.9, 32.5, 32.1, 31.0, 28.4, 26.3, 26.2, 26.1, 25.9, 23.6, (3x) 23.5 (3x), 23.4 (3x), 19.4, 18.9, 18.6, 18.4, 18,2, 17,4, 16.3, 15,8, -3.7, -3.9, -4.2, -4.7; LCMS 837.5 [M+Hf, 837,3 ( M · H I .
Preparation of XXVIax
Figure imgf000091_0001
[0174] To a stirred solution of IVax' (2.38 g, 2.30 mmol) in a mixed solvent of 2-Me- THF (24 mL) and MeOH (6 mL) was added 10% aq. NaOH (3.68 mL, 10.21 mmol) and 30% aq. H202 solution (1.30 mL, 13.07 mmol) at 0 °C. The resulting mixture was warmed to 25 °C and stirred overnight. The reaction was quenched by adding sat. aq. NaHSOs (2.85 mL, 14.79 mmol) at 25 °C and the mixture was stirred for another 30 minutes before it was added 10% aq. citric acid (20 mL) and extracted with EtOAc (20 mL). The organic layer was collected and the aqueous layer was extracted with EtOAc (10 mL x2). The combined organic layers were washed with brine (20 mL), dried over MgS€>4 (5 g), filtered and concentrated in vacuo to afford the crude XXVlax, which was purified by column chromatography on silica gel (eluent: 2% MeOH/DCM to 5% MeOH/DCM) to give the pure XXVlax (1.46 g, yield: 76%, R, 0.33 for 2%
MeOH/DCM) as a white foam.
Figure imgf000091_0002
[0175] To a stirred solution of XXVlax (7.25 g, 8.658 mmol) in DCM (180.0 mL) was added 2,6-lutidine (10.08 mL, 86.582 mmol) and TMSOTf (12.54 mL, 69.266 mmol) at 0 °C. The resulting mixture was warmed up to room temperature and stirred for 1 h. The reaction mixture was poured into sat. aq. NH4CI (100 mL). The organic layer was separated and the aqueous layer was extracted with DCM (100 mL. x2), and the combined organic layer was washed with brine, dried over Na2S04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (eiuent: from 5% MeOH/DCM to 10% MeOH/DCM) to give Vax (5.90 g, yield: 92%, r 0.5, McO! i DC\ ! 1 : 10, UV) as a pale yellow foam. lH NMR (400 MHz, CDC13) δ 6.98 (s, 1H), 6.55 (s, 1H), 6.45-6.36 (brs, 2H), 4.99 (t, J= 2.8 Hz, 1H), 4.44 (brs, IH), 3.89-3.82 (m, i l l). 3.66 (brs, IH), 3.12-3. 09 (m, 1H), 2.67 (s, 3H), 2.54-2.33 (m, 3H), 2.26-2.13 (m, 2H), 2.10 (s, IH), 1.81-1.79 (brs, IH), 1.65 (s, 3H), 1.48 (brs, 2H), 1.14-1.03 (m, 12H), 0.89 (s, 9H), 0.84 (s, 9H), 0.82-0.81 (d, J= 4.0 Hz, 3H), 0.07 (s, 3H), 0.06 (s, 6H), 0.04 (s, 3H): i3C NMR (100 MHz, CDCI3) δ 218.1, 177.6, 164.7, 152.1, 139.7, 136.4, 122.5, 118.7, 117.2, 116.9, 74.6, 59.4, 53.9, 44.5, 42.3, 39.2, 32.6, 31.6, 31.0, 29.7, 26.4, 26.3, 26.2, 26.1, 23.5, 23.0, 19.1, 18.6, 18.4, 18.2, 18.1 , 16.9, 16.5, 14.6, -3,8, -4,0, -4,8; LCMS 737.4 [M+Hf, 737.3 ! M - i i ] .
Preparation of XXVibx'
Figure imgf000092_0001
[0176] Under an atmosphere of N2 atmosphere, IVax' (95 mg, 0.09 mmol) was dissolved in dry DCM (2.5 mL), then 2,6-lutidme (0. 03 mL, 0.92 mmol) and TMSOTf (0.165 mL, 0.92 mmol) were added at 0 °C. The resulting mixture was warmed up to room temperature and stirred at room temperature for 2 h. When TLC indicated that ail starting material was consumed, MeOH (0.165 mL) was added to quench the reaction. The mixture was stirred at room temperature for 10 min, and then the solvent was removed under reduced pressure. The residue was purified by column chromatography on silica gel (eiuent: 2% MeOH DCM to 10% MeOH/DCM) to give XXVibx' (77 mg, yield: 90%, R, 0.55, MeOH/DCM= 1 : 10, UV) as a colorless oil. Ή NMR (400 MHz, CDCI3) δ 6.90 (s, IH), 6.49 (s, IH), 5.12 (t, J= 8.0 Hz, IH), 4.76 (br, 2H, N i l ). 4.66-4.65 (m, I I I). 3.84 (i, ./ 6.0 Hz, i l l). 3.78 (d, J 8.0 Hz, 1H), 3.42 (dd, ./ 16.0, 6.0 Hz, 21 1).
3.13 - 3.09 (in, 111), 2.76 (d, 3.6 Hz, 1H), 2,69 (s, 3H), 2.51-2.20 (m, 6! I ). 2.16 (s, 3H),
2.14- 2.02 (m, 3H) 1.87-1.84 (m, 311), 1.67 (s, 311), 1.65 (s, 3H), 1.25-1.22 (m, 9H), 1.14 (s, 3H), 1.07 (s, 6H), 0.95 (s, 3H), 0.88 (s, 9H), 0.84 (s, 9H), 0.09-0.00 (3s, 12H); l3C HN R (100 MHz, CDC13) δ 217.7, 169.6, 164.2, 153.1, 143.7, 137.9, 121.4, 118.3,
114.9, 78.0, 71.1, 65.4, 59.8, 53.5, 52.8, 48.3, 47.6, 45.2, 44.7, 41.6, 38.5, 38.3, 34.1, 32.9, 32.5, 31.8, 30.3, 28.9, 26.3, 26.2 (x3), 26.1 (x3), 23.4, 22.6, 20.7, 19.8, 19.1, 18.8, 18.4, 18.1, 18,0, 15.9, -3.8, -4.0, -4.3, -4,8; LCMS 934.5 [M+Hf, 934.4 [M+H]+.
Preparation of Vax from XXVIbx'
Figure imgf000093_0001
[0177] To a stirred solution of XXVIbx' (75 mg, 0.08 mmol) in a mixture of THF (0.365 mL), MeOH (0.073 mL) was added 10% aq, LiOH (0.176 mL, 0.64 mmol) at 0 °C, followed by addition of 30% aq. H202 solution (0.18 μΐ,, 1.60 mmol). The resulting mixture was warmed up to room temperature slowly and stirred at room temperature overnight. The reaction was quenched by adding sat. aq. NaHS03 (0.396 mL) at 0 °C and the mixture was stirred for another 30 mm. The resulting mixture was concentrated in vacuo and the residue was diluted with EtOAc (10 mL) and sat. aq. NH4CI (10 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (10 mL *2). The combined organic layer was washed with brine, dries over Na2S04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (MeOH/DCM= 1 :9) to give Vax (13 mg, yield: 22%, Rr 0.5, MeOH/DCM= 1 : 10, UV) as a pale yellow foam. f H NMR (400 MHz, CDCI3) δ 6.98 (s, 1H), 6.55 (s, 1H), 6.45-6.36 (brs, 2H), 4.99 (t, J--- 2,8 Hz, i l l ). 4.44 (brs, 1H), 3.89-3.82 (m, 1 1 1). 3.66 (brs, I I I). 3.12-3. 09 (m, 1H), 2.67 (s, 3H), 2.54-2.33 (m, 3H), 2.26-2.13 (m, 2H), 2.10 (s, 1H), 1.81-1.79 (brs, !H), 1.65 (s, 3H), 1.48 (brs, 2H), 1.14-1.03 (m, 12H), 0.89 is. 9H), 0.84 (s, 9H), 0.82-0.81 (d, ./ 4.0 Hz 3H), 0.07 (s, 3H), 0.06 (s, 6H), 0.04 (s, 3H); 1 V NMR (100 MHz, CDC13) f5 218.1, 177.6, 164.7, 152.1, 139.7, 136.4, 122,5, 1 18.7, 117.2, 116.9, 74.6, 59.4, 53.9, 44.5, 42.3, 39.2, 32.6, 31.6, 31.0, 29.7, 26.4, 26.3, 26.2, 26.1, 23.5, 23.0, 19.1, 18.6, 18.4, 18.2, 18.1, 16.9, 16.5, 14.6, -3.8, 4.0. -4.8; LCMS 737.4 [M+Hf, 737.3 [M+Hf.
Figure imgf000094_0001
[0178] XXVIax (470 mg, 0.56 mmol) dissolved in dry DCM (20,0 ml.) was cooled to 0 °C and added TFA (10.0 mL) slowly. The resulting mixture was stirred for 6 h at 0 °C. After the reaction was complete as judged by TI.C, the resulting mixture was
concentrated in vacuo and the residue was added DCM (30 mL) and sat. aq. NaHC03 (20 mL). The organic layer was separated and the aqueous layer was extracted with DCM (30 mL x2). The combined organic layers were washed with brine, dried over Na2S04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (eluent: 2% MeOH/DCM to 15% MeOH/DCM) to give IXa (275 mg, yield: 96%, R; 0.35, MeOS f DCM 1 : 10, UV) as a pale yellow foam. "!H NMR (400 MHz, CD3OD) δ 7.34 (s, III), 6.56 (s, 1H), 5.11 (t, ./ 7.2 Hz, 1H), 4.32 (d, J= 9.6 Hz, 1H), 3.82 (t, ./ 7.2 Hz, IH), 3.50 (t, ./ 5.6 Hz, 1H), 3.37 (s, 1H), 2.72 (s, 3H), 2.57 (t, J= 7.2 Hz, IH), 2.45 (d, 15.2 Hz, I I I). 2.36-2.29 (m, I I I). 2.12-2.08 (m, 41 1). 2.05 (s, 3H), 1.72 (s, 3H), 1.68-1.55 (m, 3H) 1.48-1.25 (m, 3H), 1.19 (s, 3H), 1.15 (s, 3H), 1.08 (d, ./ 6.4 Hz, 3H), 0.92 (d, ./ 6.4 Hz, 3H); 1 C NMR (100 MHz, CD3OD) δ 220.6, 179.3, 165.8, 151.3, 140.1, 134.6, 123.2, 117.8, 117.7, 76.1, 73.2, 59.1, 52.1, 43.1, 38.0, 35.8, 32.2, 30.6, 30.0, 25.4, 22.4, 20.9, 17.7, 17.4, 15.7, 13.1, 12.4; LCMS 509.3 [M+Hf, 509.1 [M+Hf. Preparation of Vax from IVbx
Figure imgf000095_0001
[0179] IVbx (55 mg, 0.05 mmol) was dissolved in dry DCM (1 raL), then
methyl(phenyl)sulfane (13 mg, 0.1 mmol), 2,6-lutidine (110 mg, 1 mmol) and TMSQTf ( 80 mg, 0.8 mmol) were added at 0 °C under an atmosphere of N2. The resulting mixture was stirred at room temperature for 2 h, and after TLC analysis indicated that all starting material was consumed, MeOH (0.1 mL) was added to quench the reaction. The mixture was stirred at room temperature for 10 mm, added DIPEA (260 mg, 2 mmol) and concentrated under reduced pressure to give crude Vax (360 mg) as a white solid, which was used for the next step without any further purification.
Example 10 - Preparation of Ixabepilone Preparation of Vlax from Va
Figure imgf000095_0002
[0180] To a stirred solution of HATU (4.56 g, 12,004 mmol) and DIPEA (4.18 mL, 24.008 mmol) in THF (60.0 mL) was added a solution of Vax (2.95 g, 4.001 mmol) in THF (400.0 mL) over 5 hours via a syringe pump at 30 °C. After the addition was complete, the resulting mixture was stirred at 30 °C for another 30 min and then filtered through a pad of diatomaceous earth followed by concentration in vacuo. The residue was diluted by EtOAc (100 mL) and 10% aq. citric acid (100 mL) and the organic layer was separated. The aqueous layer was extracted with EtOAc (100 mL ><2) and the combined organic layers were washed with sat. aq. NaHCC and brine, dried over MgS04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (w-heptane/EtOAc= 6: 1) to give Vlax (1.67 g, yield: 58%, Rf= 0.28, «-heptane/EtOAc= 4: 1) as a white foam. !H NMR (400 MHz, CDC13) δ 6.96 (s, 1H), 6.47 (s, 1H), 5.66 (brs, 1H), 5.19 (t, J= 8.4 Hz, IH), 4.23 (brs, 1H), 4.11 (d, .1 9.2 Hz, i l l). 3.91 (dd, ./ 6.6, 1.6 Hz, IH), 3.00-2.94 (ni, IH), 2.83 (d, ./ 14.8 Hz, IH), 2.72 (s, 3H), 2.50 (dd, J= 14.4, 10.8 Hz, IH), 2.33 (t, J= 6.8 Hz, 2H), 2.18 (brs, IH), 2.09 (s, 3H), 1.81 (brs, IH), 1.74 (s, 3H), 1.63 (m, IH), 1.50 (t, J= 13.2 Hz, 2H), 1.38-1.22 (m, 2H), 1.19 (s, 3H), 1.18 (s, 3H), 1.13 (d, ./ 6.8 Hz, 3H), 1.01 (d, 6.8 Hz, 3H), 0.96 (s, 9H), 0.87 (s, 9H), 0.14 (s, 3H), 0.120 (s, 3H), 0.1 15 (s, 3H), -0.03 (s, 3H); ¾3C NMR (100 MHz, CDCI3) (5 221.9, 169.8, 164,3, 153.0, 140.0, 139.1, 119.6, 1 18.3, 115.3, 75,3, 75.2, 60.4, 54.8, 54.4, 48.2, 40.9, 34.6, 31.5, 31.2, 27.8, 26.3, 26.2, 26.1 , 26.0, 25.0, 24.8, 21.0, 19,2, 18.6, 18.4, 17,0, 16.8, 14.5, 14,2, -3,7, -4, 1, -4.8; LCMS 719,4 [M+Hf ,
Figure imgf000096_0001
Preparation of la from Vlax
Figure imgf000096_0002
[0181] To a stirred solution of Vlax (450 mg, 0.626 mmol) in DCM (4.5 mL) at 0 °C was added TFA (1.5 mL), and the resulting mixture was stirred at 0 °C for 6 h. After the reaction was complete as judged by TLC («-heptane/EtOAc= 1 : 1), the reaction mixture was diluted with DCM (45 mL) and poured into a mixture of ice and sat. aq. \ai 1( ( The organic layer was separated and the aqueous layer was extracted with DCM (50 mL x2). The combined organic layers were washed with sat. aq. NaHC03 and brine, dried over MgS04, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (/i-heptane/EtOAc- 1:2) to give la (255 mg, yield: 83%, Rr 0.22, «-heptane/EtOAc== 1 :2) as a white foam. ' l l NMR (400 MHz, CDCI3) δ 6.92 (s, IH), 6.47 (s, IH), 6.16 (d, ./ 8,0 Hz, I H), 5.12 (t, ./ 8.0 Hz, IH), 4,32 (rn, IH), 4.07 {<± ./ 8.0 Hz, 1 1 1). 3.83-3.73 (in, 2H), 3.15 (m, 1H), 2.68 (s, 3H), 2.48-2.31 (in. 3H), 2.25-2,21 (in, IH), 2.04 (s, 3H), 2.0-1.99 (in, IH), 1.77-1.69 (m, 4H), 1.69 (s, 3H), 1.29 (s, 3H), 1.26-1.24 (m, 2H), 1.17 (d, ./ 4.0 Hz, 3H), 1.08 (s, 3H), 0.99 (d, J= 4.0 Hz, 3H); l3C NMR ilOO MHz, CD(¾) δ 221.0, 170.7, 164.9, 152.6, 140.0, 139.5, 120.9, 118.3, 115.4, 74.9, 73.4, 56.4, 53.4, 42.6, 40.4, 38.6, 32.6, 31.6, 31.5, 29.9, 25.9, 23.3, 22.8, 22.5, 19.7, 19.2, 17.1, 15.9, 14.4, 14.1 ; LCMS 491.29 j M 1 1 } .
Preparation of la from IXa
Figure imgf000097_0001
[0182] To a stirred solution of HAITI (3.04 g, 8.00 mmol) and DIPE A (2.79 mL, 16.00 mmol) in THF (20.0 mL) was added a solution of IXa (407 nig, 0.80 mmol) in THF (40.0 mL) over 10 hours via a syringe pump at 30 °C. The resulting mixture was stirred at 30 °C for another 12 hours and then filtered through a pad of diatomaceous earth followed by concentration in vacuo. The residue was diluted by EtOAc (20 mL) and 10% aq. citric acid (20 mL). The organic layer was separated and the aqueous layer was extracted with EtOAc (20 mL x2). The combined organic layers were washed with sat. aq. NaHCC and brine, dried over MgSG4, filtered and concentrated in vacuo. The residue was purified by column chromatography on silica gel (w-heptane/EtOAc= 1 :2) to give la (192 mg, yield: 49%, Rf= 0.22, «-heptane/EtOAc= 1 :2) as a white foam.
Preparation of ixabepilone
Figure imgf000097_0002
10183] To a 250-mL three-neck flask equipped with a stir bar was added 10.0 mL of deionized water, 10.0 mL of acetone and 2.50 g of NaHC03. The resulting mixture was stirred vigorously in a 24 °C hath for 15 minutes. To this mixture was added 3 portions of potassium peroxymonosuliate (1.67 g) every 10—15 minutes under a reduced pressure (ca. 50-100 mmHg). DMDO was distilled out and obtained as an acetone solution after every addition of potassium peroxymonosuliate. Under a N2 atmosphere, DMDO (10 mL) was transferred to the solution of la (61 mg, 0.124 mniol) in dry DCM (2.0 mL) slowly using a cannula while controlling the solution temperature at -78 °C. Then the reaction mixture was warmed up to "50 °C and stirred for 1.5 h. When TLC analysis indicated the reaction was complete, excess DMDO was quenched by adding dimethyl sulfide (0.1 mL) at -50 °C, and the mixture was warmed to room temperature and concentrated under reduced pressure. The residue was purified by column
chromatography on silica gel (EtOAc/«-heptane= 2: 1) to give ixabepilone (27 mg, yield: 42.8%) as a colorless oil. lH NMR (400 MHz, CDC13) δ 7,00 (nr. H i ). 6.96 (s, H I ). 6.55 (s, 1H), 4.66-4.64 (111, 1H), 4.43 (brs, 1H), 4,06-4.04 (m, 1H), 3,79 (m, 1H), 2.82-2,79 (m, i l l ). 2.77 (brs, i l l ). 2.69 (s, 3H), 2.52-2.39 (m, 2H), 2.48 (brs, 1H), 2,31-2.26 (dd, ./ 12.0, 4,0 Hz, 1 1 1 ). 1.96 (t, J= 8.0 Hz, 2H), 1 ,62-1.53 (m, 41 1 ). 1.37 (m, 3H), 1 .33 (s, 31 1 ). I 27 i s. 31 1 ). 1.16 (d, J= 4.0 Hz, 3H), 1 .09 (s, 3H), 0.98 (d, J= 8.0 Hz, 31 1 ); 1 C NMR (100 MHz, CDCI3) δ 220.8, 170.6, 165,0, 1 52.5, 138.0, 119,2, 1 16.0, 75.2, 73 ,6, 61.5, 61 ,2, 54.6, 52.7, 43, 8, 40.4, 37.9, 31 ,9, 31 .8, 30.7, 23,9, 23.0, 21.8, 21 ,0, 19,3, 17.3, 17.1 , 14.4; LCMS 507.28 [M+H],
[0184] Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, one of skill in the art will appreciate that certain changes and modifications may be practiced within the scope of the appended claims. In addition, each reference provided herein is incorporated by reference in its entirety to the same extent as if each reference was individually incorporated by reference. Where a conflict exists between the instant application and a reference provided herein, the instant application shall dominate.

Claims

A process for preparing an azaepothilone of formula I
Figure imgf000099_0001
wherein
RA is selected from the group consisting of substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl;
RB is selected from the group consisting of H, alkyl and substituted or
unsubstituted aryl; and
RL is selected from the group consisting of H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl;
the process comprising:
a) contacting a borane derivative of a compound of formula II
Figure imgf000099_0002
wherein Z is selected from the group consisting of
Figure imgf000099_0003
and
R and R2 are independently selected from the group consisting of hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), tert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS),
with a vinyl halide of formula III, RVR4
III RC
wherein R' and R4 are independently selected from the group consisting of H, tert- butyloxycarbonyl (BOC), and tot-butylsuifonyl (S02t-Bu), or together R' and R* are CPh2,
in the presence of a transition metal catalyst to provide a compound of the formula IV
Figure imgf000100_0001
b) converting the compound of formula IV to a compound of formula V
Figure imgf000100_0002
by converting Z to OH and converting R and R to H when one or both of R and R are other than H, wherein the converting steps are conducted in any order;
c) cyclizing the compound of formula V to provide a compound of formula VI
Figure imgf000100_0003
d) deprotecting the compound of formula VI to provide the azaepothilone of formula I.
2. A process for preparing an epoxide-containing azaepothilone of formula VII
Figure imgf000101_0001
wherein RA is selected from the group consisting of substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl,
RB is selected from the group consisting of H, alkyl, and substituted or unsubstituted aryl,
R*" is selected from the group consisting of H, alkyl, substituted or unsubstituted aryl, substituted or unsubstituted heteroaryl, and ftuoroalkyl,
the process comprising;
a) contacting a borane derivative of a compound of formula II
Figure imgf000101_0002
wherein Z is selected from the group consisting of
Figure imgf000101_0003
, and
R1 and R are independently selected from the group consisting of hydrogen, tnethylsiiyl (TES), trusopropylsilyi (TIPS), tert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS),
with a viny l halide of formula III
Figure imgf000102_0001
wherein RJ and R" are independently selected from the group consisting of H, teri-butyloxycarbonyl (BOC), and tert-butylsulfonyl (S02t-Bu), or together R3 and R4 are CPh2,
in the presence of a transition metal catalyst to provide a compound of the formula IV
Figure imgf000102_0002
converting the compound of formula IV to a compound of formula V
Figure imgf000102_0003
by converting Z to OH and converting R and R4 to H when one or both of R3 and R* are other than H, wherem the converting steps are conducted in any order; and c) cyclizing the compound of formula V to the compound of formula VI.
Figure imgf000102_0004
d) treating a compound of formula VI with an epoxidizing agent to form a compound of formula VIII
Figure imgf000103_0001
e) deprotecting the compound of formula VIII to provide the epoxide containing azaepothilone VII 3. A process for the preparation of a compound of formula I
Figure imgf000103_0002
wherein
RA is selected from the group consisting of substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl,
R is selected from the group consisting of H, alkyl and substituted or
unsubstituted aryl,
Rc is selected from the group consisting of H, alkyl, fluoroalkyl, substituted or unsubstituted aryl and substituted or unsubstituted heteroaryl (including thiazole, isooxazole),
the process comprising:
a) contacting a borane derivative of a compound of formula II
Figure imgf000103_0003
wherein Z is selected from the group consisting of
Figure imgf000104_0001
ST and ST
, and
R1 and R2 are independently selected from the group consisting of hydrogen, tnethylsiiyl (TES), tnisopropylsilyl (TIPS), tert-butyldimethylsilyl (TBS) and tert- butyldiphenylsilyl (TBDPS),
with a vinyl halide of formula III,
Figure imgf000104_0002
wherein R3 and R4 are independently selected from the group consisting of H, fert-butyloxycarbonyl (BOC), and tert-butylsulfonyl (S02t-Bu), or together R3 and R4 are CPh2,
in the presence of a transition metal catalyst to provide a compound of the formula IV
Figure imgf000104_0003
b) converting the compound of formula IV to a compound of formula IX
Figure imgf000104_0004
by converting Z to OH and converting R!, R2, R3 and R4 to H when any or all of Rs, R , R3 and R* are other than H, wherem the converting steps are conducted in any order; and c) cyclizing the compound of formula IX to provide the compound of formula L 4. A process according to any one of claim 1, claim 2 and claim 3, wherein the borane derivative is prepared from the compound of formula II by reaction with a borane selected from the group consisting of 9-borabicycio-[3.3.1 Jnonane (9- BBN), 9-borabicyclo[3.3.1]nonane dimer (9-BBN dimer), disiamylborane, and dicyclohexylborane. 5. A process according to claim 4, wherein the borane is selected from the group consisting of 9-borabicyclo-f 3.3.1 "jnonane (9-BBN) and 9- borabicyclo[3.3. l]nonane dimer (9-BBN dimer). 6. A process according to any one of claim 1, claim 2 and claim 3, wherein the transition metal catalyst comprises a metal selected from the group consisting of Ni and Pd. 7. A process according to any one of claim 1 , claim 2, and claim 3, wherem Z is converted to OH by treatment of the compound of formula IV with a mixture comprising H202, a hydroxide, and a solvent. 8. A process according to claim 7, wherem the hydroxide is selected from the group consisting of sodium hydroxide and lithium hydroxide. 9. A process according to claim 8, wherem the hydroxide is sodium hydroxide. 10. A process according to claim 7, wherem the solvent comprises a mixture of 2-methyltetrahydrofuran and methanol. 11. A process according to claim 1 or claim 3, further comprising converting the compound of formula I to an epoxide-containing azaepothilone of formula VII
Figure imgf000106_0001
by epoxidizing the compound of formula L
12. A process according to any of claims 1 , 2, 3 and 1 1, wherein RA is 2-methyl-thiazol-4-yl, and Ra and Rc are methyl.
A process for the preparation of a compound of form
Figure imgf000106_0002
wherein Z is
Figure imgf000106_0003
ST' , and
R1 and are independently selected from the group consisting of hydrogen, triethylsilyl (TES), triisopropylsilyl (TIPS), t<?r -butyldimethylsilyl (TBS) and tert- buty idipheny Isii l ( TBDPS ) ;
the process comprising:
a) activating a compound of formula XVI'
Figure imgf000106_0004
b) treating the activated compound of formula XVI' with a compound of formula XVII
Figure imgf000107_0001
in the presence of a Lewis acid to provide a compound of formula XVIIP
Figure imgf000107_0002
c) optionally protecting the hydroxy 1 group of the compound of formula XVHr with a protecting group selected from the group consisting of triethylsilyl (TES), triisopropylsilyl (TIPS), teri-butyldimethylsilyl (TBS) and feri-butyldiphenylsilyi (TBDPS) to provide a compound of formula XIX'
Figure imgf000107_0003
d) activating the compound of formula XVIII' or the compound of formula XIX' and then reacting the activated compound with a compound of formula XX
H xx
to provide the compound of formula II wherein R2 is H. e) optionally protecting the hydroxyl group of the compound of formula II with a protecting group selected from the group consisting of triethylsilyl (TES), triisopropylsilyl (TIPS), te/t-butyldimethylsilyl (TBS) and fert-butyldiphenylsilyl (TBDPS) to provide a compound of formula II wherein R1 and R2 are both hydroxy protecting groups independently selected from the group consisting of triethylsilyl (TES), triisopropylsilyl (TIPS), tert-butyldimethylsilyl (TBS) and tert-butyldiphenylsilyl (TBDPS).
14. A process according to claim 13, wherein activating the compound of formula XVI' in step a) comprises contacting the compound of formula XVI' with a silyi triflate reagent and a base. 15. A process according to claim 14, wherein the silyi triflate reagent is iert-butyldimethylsilyl triflate. 16. A process according to claim 1.4, wherein the base is triethylamine. 17. A process according to claim 13, wherein the activating step of step d) is conducted by treating the compound of formula XVHP or the compound of formula XIX' with a Lewis acid in the presence of an amine base at a low temperature. 18. A process according to claim 13 or claim 17, wherein the Lewis acid is a metal halide. 19. A process according to claim 18, wherein the metal halide is titanium tetrachloride (TiC ). 20. A process according to claim 17, wherein the amine base is N,N~ diisopropylethylamine and the low temperature is equal to or colder than -50 °C.
1 2
21. A process according to claim 13, wherein R and R are both tert- butyldimethylsilyl (TBS). 22. A process according to claim 2 or claim 1 1 , wherein the epoxide- containing azaepotlulone V I is ixabepilone
Figure imgf000108_0001
ixabepilone
A process for preparing a compound of formula III'
Figure imgf000109_0001
wherein RA is aryl or heteroaryl, and RB and Rl are selected from the group consisting of H, alkyl, fluoroalkyl, unsubstituted or substituted aryl, and unsubstituted or substituted heteroaryl,
the process comprising:
a) contacting a compound of formula X
Figure imgf000109_0002
in an organic solvent with tof-butanesulfinamide in the presence of an activating agent to provide a compound of formula XI
Figure imgf000109_0003
b) contacting the compound for formula XI in an organic solvent with an allylating reagent AL
Figure imgf000109_0004
AL
wherein the value n is between 1 to 4,
to provide a compound of formula XII
Figure imgf000109_0005
c) converting the compound of formula ΧΠ in an organic solvent to a compound of formula XIII by treatment with an acid
Figure imgf000110_0001
wherein X is a halogen and subscript m is 0, 1 or 2;
d) protecting the compound of formula ΧΙΠ by its reaction with di-tert- butyl dicarbonate in an organic solvent to give a compound of formula XlVa
Figure imgf000110_0002
e) converting the compound of formula XlVa to the compound of formula
24. A process according to claim 23, wherein the organic solvent of step a) is toluene and the activating reagent is KHSO4,
25. A process according to claim 23, wherein step b) provides a mixture of the compound of formula XII and a diastereomer of the formula
Figure imgf000110_0003
in a diastereomeric ratio of greater than about 10 : 1.
26. A process according to claim 23, wherein the allylating reagent of step b) is allyl magnesium bromide and the organic solvent of step b) is a mixture of 2- methyltetrahydrofuran and dichlorom ethane.
27. A process according to claim 23, wherein the compound of formula III' is further converted to a compound of formula HIb
Figure imgf000111_0001
by a deprotection step.
28. A process according to claim 23, wherein III' is further converted compound of formula Old
Figure imgf000111_0002
4 by protection with di-tert-butyl dicarbonate in the presence of a base.
5
f 29. A process according to any of claims 23, 27, and 28 wherein
-methyl-thiazol-4-yl and RB and Rc is methyl.
1 30. A process according to claim 23, wherein the organic solvent of
2 step c) is methanol and the acid is concentrated aqueous HQ.
1 31. A process according to claim 23, wherein the organic solvent of
2 step d) is dichloromethane.
1 32. A process according to claim 23, wherein the converting of step e)
2 involves treating the compound of formula XlVa with an oxidizing reagent to form a
3 compound of formula XVa
Figure imgf000111_0003
and treating the compound of formula XVa with a phosphonium ylide reagent . 33. A process according to claim 32, wherein the a phosphonium ylide reagent is formed upon the treatment of (1 -iodoethyl)triphenylphosphonium iodide with a base.
34. A process according to claim 33, wherein the base is sodium bis(trimethylsilyl)amide.
I l l
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Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1999002514A2 (en) * 1997-07-08 1999-01-21 Bristol-Myers Squibb Company Epothilone derivatives
WO2001064650A2 (en) * 2000-03-01 2001-09-07 Sloan-Kettering Institute For Cancer Research Center Synthesis of epothilones, intermediates thereto and analogues thereof
WO2008141130A1 (en) * 2007-05-11 2008-11-20 Kosan Biosciences, Inc. Process for the preparation of epothilones

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6867305B2 (en) 1996-12-03 2005-03-15 Sloan-Kettering Institute For Cancer Research Synthesis of epothilones, intermediates thereto and analogues thereof
US6365749B1 (en) 1997-12-04 2002-04-02 Bristol-Myers Squibb Company Process for the preparation of ring-opened epothilone intermediates which are useful for the preparation of epothilone analogs
TW509672B (en) * 1998-05-12 2002-11-11 Ono Pharmaceutical Co Novel intermediate compounds and processes for the production of optical active octanoic acid derivatives
US6518421B1 (en) 2000-03-20 2003-02-11 Bristol-Myers Squibb Company Process for the preparation of epothilone analogs

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1999002514A2 (en) * 1997-07-08 1999-01-21 Bristol-Myers Squibb Company Epothilone derivatives
WO2001064650A2 (en) * 2000-03-01 2001-09-07 Sloan-Kettering Institute For Cancer Research Center Synthesis of epothilones, intermediates thereto and analogues thereof
WO2008141130A1 (en) * 2007-05-11 2008-11-20 Kosan Biosciences, Inc. Process for the preparation of epothilones

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
SCHINZER, D. ET AL.: "Synthesis and Biological Evaluation of Aza-Epothilones", CHEMBIOCHEM, vol. 1, no. 1, 2000, pages 67 - 70, XP055277981 *

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