WO2013126497A1 - Devices, methods, and test kits for electronic analyte assaying - Google Patents
Devices, methods, and test kits for electronic analyte assaying Download PDFInfo
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- WO2013126497A1 WO2013126497A1 PCT/US2013/027015 US2013027015W WO2013126497A1 WO 2013126497 A1 WO2013126497 A1 WO 2013126497A1 US 2013027015 W US2013027015 W US 2013027015W WO 2013126497 A1 WO2013126497 A1 WO 2013126497A1
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Classifications
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/689—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids related to pregnancy or the gonads
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/557—Immunoassay; Biospecific binding assay; Materials therefor using kinetic measurement, i.e. time rate of progress of an antigen-antibody interaction
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54366—Apparatus specially adapted for solid-phase testing
- G01N33/54386—Analytical elements
- G01N33/54387—Immunochromatographic test strips
- G01N33/54388—Immunochromatographic test strips based on lateral flow
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/74—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving hormones or other non-cytokine intercellular protein regulatory factors such as growth factors, including receptors to hormones and growth factors
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/435—Assays involving biological materials from specific organisms or of a specific nature from animals; from humans
- G01N2333/575—Hormones
- G01N2333/59—Follicle-stimulating hormone [FSH]; Chorionic gonadotropins, e.g. HCG; Luteinising hormone [LH]; Thyroid-stimulating hormone [TSH]
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/20—Oxygen containing
- Y10T436/200833—Carbonyl, ether, aldehyde or ketone containing
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
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Definitions
- the present invention relates generally to diagnostic assays for anaiytes in a fluid sample.
- the invention relates to devices, methods, and test kits for detecting an analyte in a bodily fluid.
- Detection of human chorionic gonadotropin (hCG) in urine samples is routinely used to determine a woman's pregnant/non-pregnant status.
- Traditional one-step pregnancy test devices detect hCG by utilizing a double antibody system in a lateral flow format resulting in a "sandwich" complex of hCG, a capture antibody and a labeled antibody, which is captured at a specific detection area on a test strip.
- a digital version of the pregnancy test device consists of an opto-electronic reader powered by an internal battery that measures the absorbance/reflectance of the label particles specifically captured at the detection area of the test strip and automatically subtracts any non-specific background color from an adjacent area of the test strip that is outside the detection area.
- the adjusted measurement of absorbance/reflectance of accumulated label particles at the detection area is then compared to a preset threshold value and further processed into a clearly read YES+/PREGNANT or NO-/NOT PREGNANT digital result on a liquid crystal display (LCD) screen.
- LCD liquid crystal display
- a method of detecting an analyte in a fluid sample includes receiving a fluid sample on an assay test device, generating a signal representative of reagent development during an assay time period, generating at least one reagent development trend signal during at least a portion of the assay time period, generating at least one endpoint signal representative of a final reagent development condition at or near the end of the assay time period, and generating an assay result output based at least in part on both the at least one reagent development trend signal and the at least one endpoint signal.
- a device for detecting an analyte in a fluid sample includes means for collecting a fluid sample, means for generating a signal representative of reagent development during an assay time period, means for generating at least one reagent development trend signal during at least a portion of the assay time period, means for generating at least one endpoint signal representative of a final reagent development condition at or near the end of the assay time period, and means for generating an assay result output based at least in part on both the at least one reagent development trend signal and the at least one endpoint signal.
- a test kit for detecting an analyte in a fluid sample is also provided.
- the test kit also includes a reader, wherein the reader includes an assay test device or a port for accepting an assay test device therein and a circuit.
- the circuit is configured to generate a signal representative of reagent development during an assay time period, generate at least one reagent development trend signal during at least a portion of the assay time period, generate at least one endpoint signal representative of a final reagent development condition at or near the end of the assay time period, and generate an assay result output based at least in part on both the at least one reagent development trend signal and the at least one endpoint signal.
- a method of validating an analyte detection test from a fluid sample includes applying a fluid sample to an assay test device, generating a signal representative of reagent development during an assay time period, generating at least one reagent development trend shape signal during at least a portion of the assay time period, and generating an invalid test output based at least in part on the reagent development trend shape signal.
- An additional device for detecting an analyte in a fluid sample includes means for receiving a fluid sample, means for generating a signal representative of reagent development during an assay time period, means for generating at least one reagent development trend shape signal during at least a portion of the assay time period, and means for generating an invalid test output based at least in part on the reagent development trend shape signal.
- test kit for detecting an analyte in a fluid sample.
- the test kit includes a reader.
- the reader includes an assay test device or a port for accepting an assay test device therein and a circuit.
- the circuit is configured to generate a signal representative of reagent development during an assay time period, generate at least one reagent development trend shape signal during at least a portion of the assay time period, and generate an invalid test output based at least in part on the reagent development trend shape signal.
- FIGS. 1A and IB show perspective views of a digital detection device.
- FIGS. 2A and 2B show perspective views of another digital detection device with a removable test stick.
- FIG, 3 is a top view of an example of a printed circuit board for an exemplary digital detection device.
- FIG. 4 is a bottom view of an example of a printed circuit board for an exemplary digital detection device.
- FIG. 5 is a diagram of an example of a triphasic test strip suitable for use in an implementation of the invention.
- FIG. 6 is a circuit diagram of an example circuit suitable for use in a digital detection device.
- FIG. 7 shows a graph of calcu lated values over time for a test period.
- FIG. 8 is a flow diagram of a process for detecting an invalid test for a monitored analyte.
- FIG. 9 shows sample graphs of calculated values over time for a test period for invalid tests.
- FIG. 10 is a flow diagram of a process for deriving a positive or negative test result output for a monitored anaiyte.
- FIG. 11 shows a sample graph of calculated values producing a positive test output.
- FIG . 12 shows sample graphs of calculated values producing a negative test output.
- An improved diagnostic test that determines a woman's pregnant/non- pregnant status by detecting clinically significant and very low levels ⁇ e.g., 3-5 mlU/mL) of hu man chorion ic gonadotropin (hCG) in urine.
- the test comprises a test strip containing reagents for the detection of hCG and an electronic reader that measures color development at a detection area of the test strip and converts it to an electronic or digital signal.
- hCG in urine is used to describe the invention, this disclosure is applicable to the qualitative or semi-quantitative detection of low levels of any analyte in a biological sample.
- Improvements were made to the algorithm of the electronic reader to ⁇ ) optimize the detection of a valid fluid front, it) increase the detection limit without compromising the reliability and accuracy of the test system, and iii) improve the determination of test result validity.
- FIGS. 1A and IB show a perspective view of an exemplary digital detection device.
- the digital detection device 10 includes a cap 14.
- FIG. 1A illustrates a perspective view of the device 10 with the cap 14 intact
- FIG. IB illustrates a perspective view of the device 10 with the cap 14 removed.
- the device also comprises an outer, molded casing 12 which defines a hollow, elongate enclosure.
- Casing 12 is configured to provide a recessed portion 20 shaped to permit users to place their thumb into the recessed portion and their forefinger on the bottom of the casing 12 to securely hold the device 10.
- a central section on the top of the casing 12 defines a centrally located window 40 which permits a user to observe test results.
- Casing 12 defines a sample receiving member 16 onto which a fluid sample can be applied to the test strip in the device 10.
- a removable cap 14 can be secured to one end of the casing enclosure over the sample receiving member 16.
- Sample receiving member 16 is positioned so that part of the sample receiving member is received in the casing enclosure and part of the sample receiving member 16 extends from the end of the casing enclosure.
- color or reflectivity changes are sensed electronically, and the results are presented to a user on a display 42.
- the display 42 may render various icons or messages to a user, such as test results, device status, or error messages.
- the display 42 may be color or monochrome.
- the display 42 is a liquid crystal display (LCD).
- FIG. 2A shows another perspective view of an exemplary digital detection device without an integral test stick.
- a device 100 may be formed from plastic, metal, or other material.
- the device 100 includes a test stick acceptor port 110.
- the test strip acceptor port is designed to receive test sticks for analysis.
- the device 100 also includes a display 120.
- the display 120 may render various icons or messages to a user such as test results, device status, or error messages.
- the display 120 may be color or monochrome.
- the display 120 may be a liquid crystal display (LCD).
- the device 100 may further include a test stick alignment marker 130.
- the test strip alignment marker 130 is a triangle pointing to the test stick acceptor 110.
- the test stick alignment marker aids with insertion of a test stick into the device 100.
- the device 100 may include a test stick ejector 140.
- the test stick ejector 140 may be a manual or electronic mechanism to eject a previously inserted test stick from the device 100.
- FIG. 2B shows another perspective view of an exemplary digital detection device with a disposable test stick inserted therein.
- the device 100 is accepting a test stick assembly 200 housing the actual test strip 210.
- the test stick assembly 200 It is desirable for the test stick assembly 200 to couple with the device 100 so that the test stick assembly 200 will not fall out of the device 100 and may form a water resistant seal to protect a portion of the device 100 from fluid samples collected via the test stick assembly 200.
- the coupling should also minimize ambient light leakage into the device when testing is being performed on a test strip.
- Fluid samples collected via the test stick assembly 200 are generally urine, although depending on the test being performed, could be blood, sweat, tears, saliva, or any bodily fluid.
- An example test strip 210 will be described below in reference to FIG. 5.
- the test stick assembly includes a test stick housing 220.
- the test stick housing 220 may be formed from plastic.
- the test stick assembly 200 includes a test stick alignment marker 230 corresponding with the test stick alignment marker 130 on the device 100.
- the test stick assembly 200 may also include a clicking sound feature to indicate proper alignment and insertion into device 100.
- FIG. 3 is a top view of an example of a printed circuit board for an exemplary digital detection device.
- the printed circuit board 300 may be housed, for example, in the digital detection devices of FIGS. 1A, IB, 2A, and 2B.
- the display 120 is coupled with the printed circuit board 300 using one or more signal lines 320.
- the printed circuit board may include one or more input/output (I/O) terminals 330.
- the I/O terminals 330 may be used to read or write data from a memory (e.g., collected analyte readings, new program instructions, etc.).
- the memory may include volatile or non-volatile memory elements.
- FIG. 4 is a bottom view of an example of a printed circuit board for an exemplary digital detection device. More specifically, FIG. 4 is a bottom view of the printed circuit board 300 of FIG. 3.
- the printed circuit board 300 includes a processor chip 425 that may include digital circuitry such as a processor, memory, and input/output circuits, as well as analog to digital converters, digital to analog converters, analog circuits such as amplifiers, and may be implemented in whole or part in a microcontroller, programmable gate array, digital signal processor (DSP) or the like.
- the processor chip 425 is coupled with the display 120 and to one or more data I/O pads for test, data downloads, programming, etc.
- the memory may be used to store data received or produced by the processor chip 425.
- the memory may also be used to store instructions to direct operation of the processor chip 425.
- the printed circuit board 300 may further be coupled to a power source 420.
- the power source is a battery, although any other suitable power source may be used.
- Discrete components such as resistors and capacitors 410 may also be provided on the printed circuit board 300.
- the printed circuit board 300 includes one or more sensors 430.
- the printed circuit board 300 includes two optical sensors 430a and 430b.
- the sensors 430 may be phototransistors.
- the sensors 430 may be one or more photodiodes, electroactive sensors, or radioactivity sensors.
- the sensors may be of the same or different types.
- the sensors 430 are coupled with the processor chip 425.
- the printed circuit board 300 may include an emitter 440.
- the emitter 440 may be a light source such as a light emitting diode (LED).
- the light source 440 may be located equidistant between the photoelectric sensors 430a and 430b.
- the light source 440 may be coupled with the processor chip 425.
- the light source 440 may illuminate according to a configurable pattern. In an implementation where the light source 440 is coupled with the processor chip 425, the illumination pattern may be controlled by the processor chip 425. In an implementation where the light source 440 is not coupled with the processor chip 425, the illumination pattern may be controlled by a separate timing circuit.
- the sensor 430 may detect a response from the illumination.
- the photoelectric sensor 430 will detect the amount of light reflected by the test strip 210. An example method of detection will be discussed in more detail below.
- the emitter 440 and sensor 430 may be used to detect the insertion of a test stick.
- the emitter in the digital detection device can turn on periodically, for example, every two seconds. Detection of the presence of a test stick may be achieved by detecting a large difference in sensor response depending on whether the emitter is on or off due to the presence of the nearby reflective surface of the test stick.
- the device 100 may use this information to alter operation mode (e.g., from low power stand-by mode in the packaging to higher power test mode when a test strip is inserted).
- FIG. 5 is a diagram of an example of a triphasic test strip suitable for use in an implementation of the invention.
- the test strip 210/500 shown in FIG. 5 may be included in device 10 shown in FIGS. 1A and IB or included in the test stick assembly 200 shown in FIG. 2B.
- the fluid path along the test strip 210/500 will be discussed starting with the bottom of the figure and moving up. It will be recognized that this spatial orientation is merely a convenience.
- a fluid sample may be applied.
- the test strip 210/500 may be formed from an absorbent material to aid in the uptake of the fluid sample.
- the fluid sample may encounter a conjugate region 510.
- the conjugate region 510 is a colloidal gold antibody conjugate region where the antibody binds to the analyte of interest (e.g., hCG).
- analyte in the fluid sample will bind the gold conjugated antibody in the liquid phase and carry the conjugate-analyte complex along the test strip.
- the fluid sample may then pass through a second antibody region 520.
- the second antibody region 520 includes biotinylated antibody (antibody chemically coupled to biotin) that specifically binds to a different epitope on the analyte of interest than the gold conjugated antibody, forming a "sandwich" complex of analyte and two antibodies, one with colloidal gold, and the other with biotin.
- the sandwich complex may then be carried further along the test strip across a first overlapping region 530.
- the area from the start of the test strip 210/500 to the first overlapping region 530 may generally be referred to as the release medium 590.
- the test strip 210/500 After the overlapping region 530, the test strip 210/500 includes a capture medium 540. As the fluid sample continues along the test strip 210/500, the sample next encounters a test line 550.
- the test line 550 is an avidin test line for binding the biotin on the second antibody to capture the sandwich complex (with the gold) at the test line. The test line 550 will thus become darker as more of the sandwich complexes are accumulated.
- the electronics system which may include sensors and/or a processor for performing a transformative algorithm on sensed data, may measure the colloidal gold specifically bound at the test line 550 of the test strip 210/500.
- the test strip 210/500 may include a control line 560.
- the control line 560 may also generally be referred to as a reference line.
- the control line 560 includes antibodies or other proteins that specifically bind the gold conjugated antibody to provide a measurement of gold bound antibody in the fluid that is not specifically bound to the analyte. Reflectance measurements from the test line 550 and/or control/reference line 560 may be used separately to define successful testing and analyte concentrations.
- the reflectance of light from the test line 550 may be compared with the reflectance from the test strip downstream from the test line 550 in a region where there may or may not be a control/reference line 560 to define successful testing and analyte concentrations. Test strips without a control/reference line may be advantageous because it eliminates the need for the antibodies at this line, reducing cost of the test strip.
- the capture medium 540 may terminate with a second overlapping region 570.
- the second overlapping region 570 may serve as a border between the capture medium 540 and an absorbent portion 580 of the test strip 210/500.
- the absorbent portion 580 of the test strip 210/500 facilitates the uptake of the fluid sample as it arrives at the end of the test strip 210/500.
- Test strips of this nature are known in the art, and are described in more detail in, for example, FIGS. 2-6 and the accompanying description of U.S. Patent 6,319,676, the entire content of which is hereby incorporated by reference.
- test strip 210/500 when inserted into a digital detection device, such as the digital detection device 10 shown in FIG. 1 or the digital detection device 100 shown in FIG. 2, such that the capture medium region is substantially located under the sensor 430.
- a first sensor 430 may be located directly over the test line 550.
- a second sensor may be located directly over a second region of the test strip that may or may not contain a control/reference line. Further details of one embodiment of a sensor 430, emitter 440, and test strip 210/500 alignment are discussed below. Measurements of the reflectivities provide a measure of ana!yte concentration.
- FIG. 6 is a circuit diagram of an example circuit suitable for use in a digital detection device.
- This implementation includes photodetectors 430a and 430b as the sensors.
- Sensor 430a may be positioned substantially over the test line 550 of the test strip.
- Sensor 430b many be positioned over a blank region downstream of the test line on the test strip. In this embodiment, no control/reference line is present. As described further below, reflectance measurements are made for these two regions for a time period after a fluid sample is applied to one end of the test strip.
- the circuit includes a light emitter 440.
- the light emitter 440 may be an LED.
- the light emitter 440 is connected a processing/control circuit 806 that may be in the processor chip 425.
- the photodetectors 430a and 430b are also each coupled to the processing/control circuit 806 to control initiation of the photodetector operation.
- the output of photodetector 430a is coupled to capacitor 813, and the output of photodetector 430b is coupled to capacitor 812.
- the other side of each capacitor is grounded.
- Each capacitor further has a reset switch 817 and 816 connected across it to selectively discharge the capacitors. In operation, each photodetector output will charge its respective capacitor with its output current.
- the time required to charge each capacitor to a defined threshold level is a measure of the photodetector output, and thus is a measure of the reflectivity of the test strip in the region under each photodetector.
- the time period to charge the capacitor to the threshold may be determined as follows. If photodetector 430a is being measured, LED 440 is switched on, switch 817 is opened, a counter 830 is started, and a switch 820 is used to connect the high side of capacitor 813 to the positive input of a comparator 824.
- the negative input to the comparator 824 is coupled to a reference voltage, which is advantageously derived from the battery voltage VDD.
- the reference voltage may be 1 ⁇ 2 of VDD.
- the output 832 of the comparator 824 is coupled to a stop input of the counter 830 that stops the counter 830 when the comparator output goes high.
- the voltage on the high side of capacitor 813 increases, increasing the voltage input to the positive input of the comparator 824.
- the comparator output 832 transitions from low to high.
- the count value 836 which is a measure of the time between counter start at the beginning of the process and counter stop when the comparator goes high, is fed to the processor 806.
- a larger count indicates a longer time for capacitor charging, indicating a lower photodetector output, and therefore a less reflective surface under the photodetector.
- processor chip 425 Collectively, the elements of the processor chip 425 are connected to one side of a power supply 420. Explicit power transmission traces between the elements of the processor chip 425 have been omitted from FIG. 6. The other side of the power supply 420 is connected to a ground.
- Processor chip 425 may also include a memory 860 for storing data and instructions as described above.
- the value of M is near zero, because both areas of the test strip under each photodetector have approximately equal reflectances before the fluid sample migrates down the test strip to reach the photodetector regions. Furthermore, the current counts B and D will be about equal to the initial counts A and C, making M about equal to 1 - 1 which is near zero. When the fluid front of the sample first reaches the upstream detector, the count value D will increase because the test strip in that region becomes less reflective, causing M to increase since A/B is still near 1, but C/D is now less than 1. The reconstituted gold labeled antibodies and antibody-antigen sandwiches slightly lag the fluid front.
- This value for M will be greater than 0 if the reflectance of the test line is lower than the reflectance of the blank region, which indicates that gold labeled antibody-antigen sandwiches captured at the test line 550 exceed the residual background of gold labeled antibodies in the blank downstream region of the test strip (because D will be larger than B).
- Higher final values of M indicate higher concentrations of antigen in the fluid sample.
- the device does not monitor M as a continuous variable, but rather generates M values at a given polling rate, which may be approximately once per second.
- the actual numerical values for M that are produced with this algorithm will depend on the value selected for the scale factor S and the sensitivity of the assay materials. In one embodiment developed by the applicants, the scale factor is 666, and the resulting M values generally range from relatively small negative numbers to 100 or so.
- a normal valid test has several characteristic shape features and trend features in the time course of collected calculated values (e.g., a series of calculated M values as the reagent develops on the assay test device). Conventionally, these features have been ignored in the determination of test results and test validity. Typically, only initial detections of fluid and label and final detections of bound label to the test line have been considered. Described further below are novel apparatus and methods to include these shape and trend features as part of determinations of the validity of a test and/or the result of a test.
- FIG. 7 shows a graph of calculated values M over time for an assay time period for a normai, valid, and positive test result.
- these M values individually or collectively are one example of a signal or signals representative of reagent development during the assay time period.
- the M values follow a characteristic shape and trend during reagent development including an initial peak, a subsequent dip, and then a generally monotonic rise to the end of the test period. These shapes and trends may be identified and used to enhance the accuracy of test results as described further below.
- the test is initiated when the device is removed from the pouch and exposed to ambient light. Upon detecting ambient light, the microcontroller wakes up and takes initial front and rear sensor readings (collectively referred to as initial reading). Subsequent readings are taken once every 1.048. A calculated value (e.g., M above) is derived from the front and rear sensors and is used to determine how much the test line area differs from the background. At the initial reading, because the test has not been performed, both front and rear sensors are detecting similar background values.
- the detection device may be configured to display a clock icon indicating that the test is ready to be performed. The user applies the fluid sample and waits. When the fluid sample reaches the front sensor, the calculated value starts to rise as described above.
- the detection device may be configured to display an indication, such as now starting to blink the clock icon, to indicate this event, and a "Label Detected" flag may be set.
- the algorithm now enters a loop, taking 172 sensor readings at regular intervals and computing the associated M values.
- the interval is 1.048 seconds per reading. This takes 180 seconds, or three minutes following the data point at which the Label Detected flag was set. After three minutes the test is over and the result is determined and displayed.
- the algorithm looks for a local maximum. This peak value occurs in a normal valid test when the initial solubilized label begins to reach the rear downstream sensor. The peak is found by comparing the next calculated value with the data point of label detection. If it is higher, the time or index of this data point and its value are stored in a memory location. This continues for subsequent data points, overwriting the stored value and data point index or time each time the current value rises from the last value.
- a calculated value is generated that is lower than the stored value, the difference between the new value and the stored value is computed, without overwriting the stored values.
- a "Peak Found" flag may be set. In one implementation, the threshold is nine.
- FIG. 7 identifies the peak at the point labeled "Peak" near the 30 second mark. The data point index or time of the stored highest value after the calculated values drop more than the threshold represents the "peak time" in the course of reagent development.
- the algorithm looks for a local minimum or dip in the series of calculated values.
- the dip that follows the initial peak occurs in a normal valid test when the initial solubilized label begins to travel beyond the rear downstream sensor.
- the dip value is found by calculating the current calculated value minus the previous calculated value. If the difference is negative, the calculated value is still going down.
- the time or data point index of the smallest calculated value is stored in memory and a "Dip Found" flag may be set.
- FIG. 7 identifies the dip at the point labeled "Dip" near the 45 second mark.
- the data point index or time of the lowest sample value represents the "dip time" in the course of reagent development.
- the test waits for a predetermined period of time.
- the time may be marked by the timer, e.g. in device 10 or device 100, or a number of additional data points collected.
- a number ⁇ e.g., 8 as shown in FIG. 7 sequential values are summed to generate a "First Value.”
- the BEGIN_TIME may be 13 data points (e.g. 13.624 seconds) after the data point previously identified as the dip time.
- a "rising count value” may be collected continuously for the rest of the test period.
- Th is initial value may the 13 th value after the d ip data point index number, e.g. the sample taken at BEG1N_TIME.
- the next data point is compared with this stored data point. If the value associated with this next data point is larger than the stored data point value, the rising count value is incremented. If it is less than the stored data point value, the rising count value is decremented. If the values are the same, the rising count value is unchanged. The current data point value then replaces the stored data point value.
- the rising count value is therefore the n umber of times the calculated value rises minus the number of times it falls.
- the rising count value can be compared to a limit or threshold at the end of the assay. If the rising count is high, this indicates a generally monotonic increase in reagent development at the test line.
- Another parameter that may be calculated is a measure of the waviness of the reagent development between the dip time and the end of the test period.
- the detection of waviness is configured to begin 36 data points (37.728 seconds) after the detection of the dip, designated as "Start Waviness" in FIG. 7.
- an initial calculated value at the Start Waviness point may be stored in a first memory location. This value in the first memory location represents a maximum calculated value "MaxCalc.”
- MaxCalc MaxCalc
- the difference between MaxCalc and the new measurement value is stored in a second memory location as a "waviness" measure. This difference represents is how far the current value of is from the stored maximum value. If this number is greater than the currently stored waviness value, then the waviness value is set to this difference. When the stored waviness value is large, this indicates the presence of at least one additional peak and dip combination that follows the first normal peak and dip combination. Such a shape is not expected to be present in a normal valid test.
- each calculated value after the Start Waviness time is subtracted from the local moving average. If the calculated value falls below the moving average, this deviation is compared to the previous deviations. The largest of these deviations is saved in memory.
- the last eight sequential calculated values are added together to give a quantity called "Last Value.”
- the First Value may be subtracted from the Last Value to derive a "total rise vaiue" representative of the total change in reagent development that occurred after the dip which is after the initial fluid and solubilized label fronts have passed the two sensors.
- this total rise parameter can be compared to a threshold. When the total rise exceeds the threshold, this indicates significant development at the test line over the course of the assay.
- FIG. 7 illustrates several novel parameters for characterizing reagent development during the course of an assay.
- Some of these parameters denoted here as reagent development trend shape parameters, may involve identifying local maximums, minimums, or both in the course of the assay. These can be useful in determining whether an assay can be considered to have produced a valid, reliable final result. This is described below with reference to FIGS. 8 and 9.
- FIG. 8 is a flow diagram of an exemplary process for detecting a valid test for a monitored analyte.
- the device is activated as described above.
- decision block 804 it is determined whether the fluid sample has been detected. As described above, the fluid sample may be detected using several processes. The fluid sample may fail to be detected if the calculated value never reaches a pre-determined value (e.g., 20) for a pre-determined period of time (e.g., three minutes). If the fluid sampie is not detected, an indication of an invalid test is transmitted, such as via a display, at block 806.
- a pre-determined value e.g. 20
- a pre-determined period of time e.g., three minutes
- the label particles used in the test are gold particles. It will be appreciated that the process shown in FIG. 8 may be applied for any label particles. Detection of the label particles may be accomplished by generating a calculated value above a second threshold (e.g., 75) as described above. If label particles are not detected, an indication of an invalid test is transmitted, such as via a display, at block 806.
- a second threshold e.g. 75
- the shape of the development trend of the calculated values is assessed. One assessment is to identify the presence or absence of local minima and maxima in portions of the development trend of the calculated values. As discussed above, the presence of one or more of an initial peak, a subsequent dip, and a further subsequent absence of excessive waviness may be detected. If the development trend shape is invalid, an indication of an invalid test is transmitted, such as via a display, at block 806. If the development trend shape is valid, at block 1000, the output of the test result is transmitted, such as via a display. Generating the output of the test result will be described in further detail in reference to FIG. 10.
- FIG. 9 contains sample graphs of calculated values over time for a test period for invalid tests.
- the graph shows calculated values on the y-axis and elapsed test time along the x-axis.
- Time 0 is the time indicating the start of the test.
- the graph includes a main plot of calculated values in solid line, plot 902. This main plot illustrates an invalid test due to waviness.
- a local maximum in calculated values is present.
- time 120 seconds a local minimum is present. The difference between these two values will be stored as the waviness value described above. If this difference 903 exceeds a threshold, the test may be identified as invalid due to excessive waviness.
- Plot 904 shows a graph of calculated values which departs from the main plot at shortly after time 0.
- Plot 904 illustrates an example of a failure to detect an initial local maximum within three minutes. As is shown by Plot 904, no peak is reached for the calculated values plotted by the end of the test period, which in FIG. 9 is 180 seconds.
- Plot 906 shows another graph of calculated values which departs from the main plot shortly after time 20.
- Plot 906 illustrates an example of a failure to detect a local minimum subsequent to the initial peak.
- the calculated values peak at 200 at approximately 10 seconds.
- the calculated values then drop off gradually, but never exhibit a dip such as that shown in the main plot 902 at approximately 40 seconds. In this case, the test would be identified as invalid.
- FIG. 7 also illustrates several novel parameters, denoted here as reagent development trend parameters, which may involve identifying a general monotonic trend of sufficient magnitude in reagent development in the course of the assay. After an assay is determined to be valid using the reagent development trend shape parameters as described above, these other parameters can be useful in determining the test result output that is displayed to the user of the device. This is described below with reference to FIGS. 10, 11, and 12.
- FIG. 10 is a flow diagram of an exemplary process for detecting a monitored analyte.
- the flow begins at block 800 where the validity of the fluid sample, label, and development trend are affirmed as described in FIG. 8.
- decision block 1002 a determination is made as to whether one or more of the development trend parameters are within pre-determined limits.
- Development trend parameters may include the rising count and total rise as described above. If the development trend parameters are not within the pre-determined limits, at block 1004, a negative test result is indicated, such as via a display, indicating that the analyte is not present in the fluid sample.
- Example plots of calculated values producing a negative test result are shown and described in further detail below with reference to FIG. 12.
- the endpoint values may include the Last Value and/or the Final Calc value of FIG. 7. If the endpoint parameters do not exceed the pre-determined thresholds, at block 1004, a negative test result is indicated, such as via a display. If the endpoint value(s) exceed the pre-determined thresholds, at block 1008, a positive test result is indicated, such as via a display.
- An example plot of calculated values for a positive test result indicating the presence of the analyte are shown and described in further detail below with reference to FIG. 11.
- the indication of the test result at block 1004 and/or block 1008 may include transmitting a signal including the test result for further processing (e.g., storage, transmission).
- development trend parameters are determined as "within limits.” It will be appreciated that in some implementations, the determination of block 1002 may include identifying whether the development trend parameters exceed and/or fall below a pre-determined value. Similarly, while the determination of block 1006 is performed to determine if endpoint values exceed a threshold, it will be appreciated that in some implementations, the determination of block 1002 may include identifying whether the endpoint values are within a predetermined range of values and/or fall below a pre-determined value.
- FIG. 11 shows an example plot of calculated values over time for a positive test result.
- the graph shows calculated values on the y-axis and elapsed test time along the x-axis.
- an initial peak 1102 and an initial dip 1104 will be detected, and the subsequent trend does not show a wavy shape, so the test will be considered valid.
- the development subsequent to the dip 1104 rises monotonically, so the rising count value described above will be above the required threshold.
- the total rise is sufficient to exceed the total rise threshold.
- the endpoint values are large enough to exceed the endpoint threshold. Because the development trend parameters and the endpoint parameter both exceed the required thresholds, a positive result is output.
- FiG. 12 shows example plots of calculated values over time for negative test results.
- the main plot 1202 illustrates a typical reagent development for a negative result. Following the dip, the calculated values rise very little, and the final calculated value(s) are low. For example graph 1204, however, the final values are relatively high. Conventionally, this might produce a positive test result. However, the fact that the total rise from First Value to Last Value is small, this indicates that the reason for the relatively large final value is likely unrelated to the presence of the analyte. In some embodiments, the total rise parameter will therefore be below the threshold, and a negative output will be displayed instead, which is a more accurate result.
- variation of the monitored analyte may be used to indicate an onset of menopause (e.g., natural menopause, perimenopause, induced menopause, premature menopause, or post menopause) or ovarian reserve for the individual.
- variation of a monitored analyte such as progesterone may be used to indicate an onset of an abnormal pregnancy (e.g., failed implantation, ectopic pregnancy) for the individual.
- determining encompasses a wide variety of actions. For example, “determining” may include calculating, computing, processing, deriving, investigating, looking up (e.g., looking up in a table, a database or another data structure), ascertaining and the like. Also, “determining” may include receiving (e.g., receiving information), accessing (e.g., accessing data in a memory) and the like. Also, “determining” may include resolving, selecting, choosing, establishing and the like.
- a phrase referring to "at least one of" a list of items refers to any combination of those items, including single members.
- "at least one of: a, b, or c” is intended to cover: a, b, c, a-b, a-c, b-c, and a-b-c.
- any suitable means capable of performing the operations such as various hardware and/or software component(s), circuits, and/or module(s).
- any operations illustrated in the Figures may be performed by corresponding functional means capable of performing the operations.
- DSP digital signal processor
- ASIC application specific integrated circuit
- FPGA field programmable gate array signal
- PLD programmable logic device
- a general purpose processor may be a microprocessor, but in the alternative, the processor may be any commercially available processor, controller, microcontroller or state machine.
- a processor may also be implemented as a combination of computing devices, e.g., a combination of a DSP and a microprocessor, a plurality of microprocessors, one or more microprocessors in conjunction with a DSP core, or any other such configuration.
- the functions described may be implemented in hardware, software, firmware, or any combination thereof. If implemented in software, the functions may be stored on or transmitted over as one or more instructions or code on a computer-readable medium.
- Computer-readable media includes both computer storage media and communication media including any medium that facilitates transfer of a computer program from one place to another.
- a storage media may be any available media that can be accessed by a computer.
- such computer-readable media can comprise RAM, ROM, EEPROM, CD-ROM or other optical disk storage, magnetic disk storage or other magnetic storage devices, or any other medium that can be used to carry or store desired program code in the form of instructions or data structures and that can be accessed by a computer.
- any connection is properly termed a computer-readable medium.
- the software is transmitted from a website, server, or other remote source using a coaxial cable, fiber optic cable, twisted pair, digital subscriber line (DSL), or wireless technologies such as infrared, radio, and microwave
- the coaxial cable, fiber optic cable, twisted pair, DSL, or wireless technologies such as infrared, radio, and microwave are included in the definition of medium.
- Disk and disc includes compact disc (CD), laser disc, optical disc, digital versatile disc (DVD), floppy disk and blu-ray disc where disks usually reproduce data magnetically, while discs reproduce data optically with lasers.
- computer readable medium may comprise non-transitory computer readable medium (e.g., tangible media), in addition, in some aspects computer readable medium may comprise transitory computer readable medium (e.g., a signal). Combinations of the above should also be included within the scope of computer-readable media.
- the methods disclosed herein comprise one or more steps or actions for achieving the described method.
- the method steps and/or actions may be interchanged with one another without departing from the scope of the claims.
- the order and/or use of specific steps and/or actions may be modified without departing from the scope of the claims.
- a storage media may be any available media that can be accessed by a computer.
- such computer-readable media can comprise RAM, ROM, EEPROM, CD- ROM or other optical disk storage, magnetic disk storage or other magnetic storage devices, or any other medium that can be used to carry or store desired program code in the form of instructions or data structures and that can be accessed by a computer.
- Disk and disc include compact disc (CD), laser disc, optical disc, digital versatile disc (DVD), floppy disk, and Blu-ray ® disc where disks usually reproduce data magnetically, while discs reproduce data optically with lasers.
- certain aspects may comprise a computer program product for performing the operations presented herein.
- a computer program product may comprise a computer readable medium having instructions stored ⁇ and/or encoded) thereon, the instructions being executable by one or more processors to perform the operations described herein.
- the computer program product may include packaging material.
- Software, instructions, or data may also be transmitted over a transmission medium.
- a transmission medium For example, if the software is transm itted from a website, server, or other remote source using a coaxial cable, fiber optic cable, twisted pair, digital subscriber line (DSL), or wireless tech nologies such as infrared, radio, and microwave, then the coaxial cable, fiber optic cable, twisted pair, DSL, or wireless technologies such as infrared, radio, and microwave are included in the definition of transmission medium.
- modules and/or other appropriate means for performing the methods and techniques described herein can be downloaded and/or otherwise obtained by a user terminal and/or base station as applicable.
- a device can be coupled to a server to facilitate the transfer of means for performing the methods described herein.
- various methods described herein can be provided via storage means (e.g., RAM, ROM, a physical storage medium such as a compact disc (CD) or floppy disk, etc.), such that a device can obtain the various methods upon coupling or providing the storage means to the device.
- storage means e.g., RAM, ROM, a physical storage medium such as a compact disc (CD) or floppy disk, etc.
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AU2017202377A AU2017202377B2 (en) | 2012-02-22 | 2017-04-11 | Devices, methods, and test kits for electronic analyte assaying |
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AU2017202377B2 (en) | 2019-01-17 |
CA3114701C (en) | 2023-03-07 |
CA3114701A1 (en) | 2013-08-29 |
EP2817617B1 (en) | 2018-03-28 |
US9588113B2 (en) | 2017-03-07 |
US10352946B2 (en) | 2019-07-16 |
AU2017202377A1 (en) | 2017-04-27 |
MX2014010155A (en) | 2014-09-16 |
CA2863353C (en) | 2021-06-01 |
MX352035B (en) | 2017-11-07 |
US20170138954A1 (en) | 2017-05-18 |
CA2863353A1 (en) | 2013-08-29 |
AU2013222512B2 (en) | 2017-01-19 |
US20130217136A1 (en) | 2013-08-22 |
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EP2817617A1 (en) | 2014-12-31 |
EP2817617A4 (en) | 2016-02-17 |
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