WO2011131944A1 - Methods for obtaining dendritic cells - Google Patents

Methods for obtaining dendritic cells Download PDF

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WO2011131944A1
WO2011131944A1 PCT/GB2011/000623 GB2011000623W WO2011131944A1 WO 2011131944 A1 WO2011131944 A1 WO 2011131944A1 GB 2011000623 W GB2011000623 W GB 2011000623W WO 2011131944 A1 WO2011131944 A1 WO 2011131944A1
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cells
dngr
population
antigen
hscs
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Lionel Frantz Poulin
Caetano Reis E Sousa
Dominique Bonnet
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Cancer Research Technology Ltd
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Cancer Research Technology Ltd
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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K40/00Cellular immunotherapy
    • A61K40/10Cellular immunotherapy characterised by the cell type used
    • A61K40/11T-cells, e.g. tumour infiltrating lymphocytes [TIL] or regulatory T [Treg] cells; Lymphokine-activated killer [LAK] cells
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K40/00Cellular immunotherapy
    • A61K40/40Cellular immunotherapy characterised by antigens that are targeted or presented by cells of the immune system
    • A61K40/41Vertebrate antigens
    • A61K40/42Cancer antigens
    • A61K40/4267Cancer testis antigens, e.g. SSX, BAGE, GAGE or SAGE
    • A61K40/4269NY-ESO
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K40/00Cellular immunotherapy
    • A61K40/40Cellular immunotherapy characterised by antigens that are targeted or presented by cells of the immune system
    • A61K40/41Vertebrate antigens
    • A61K40/42Cancer antigens
    • A61K40/4271Melanoma antigens
    • A61K40/4272Melan-A/MART
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    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/06Animal cells or tissues; Human cells or tissues
    • C12N5/0602Vertebrate cells
    • C12N5/0634Cells from the blood or the immune system
    • C12N5/0639Dendritic cells, e.g. Langherhans cells in the epidermis
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    • C12N2501/00Active agents used in cell culture processes, e.g. differentation
    • C12N2501/10Growth factors
    • C12N2501/125Stem cell factor [SCF], c-kit ligand [KL]
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    • C12N2501/00Active agents used in cell culture processes, e.g. differentation
    • C12N2501/20Cytokines; Chemokines
    • C12N2501/22Colony stimulating factors (G-CSF, GM-CSF)
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    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2501/00Active agents used in cell culture processes, e.g. differentation
    • C12N2501/20Cytokines; Chemokines
    • C12N2501/23Interleukins [IL]
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N2501/00Active agents used in cell culture processes, e.g. differentation
    • C12N2501/20Cytokines; Chemokines
    • C12N2501/26Flt-3 ligand (CD135L, flk-2 ligand)
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    • C12N2506/00Differentiation of animal cells from one lineage to another; Differentiation of pluripotent cells
    • C12N2506/11Differentiation of animal cells from one lineage to another; Differentiation of pluripotent cells from blood or immune system cells

Definitions

  • the invention relates to methods for obtaining a human equivalent of murine CD8 + dendritic cells (DC) and the exploitation of such cells in immunotherapeutic approaches.
  • DC dendritic cells
  • Mouse CD8a + DC have attracted much attention and have been studied extensively. These cells posses several functional properties that distinguish them from other DC subtypes. These include a superior capacity to cross-present exogenous antigens on MHC class I, to ingest material from dead or dying cells and to produce IL-12 in response to innate and T cell derived stimuli (Heath and Carbone, 2009; Naik, 2008;
  • CD8 + DC have emerged as an attractive cellular target for vaccination strategies, in particular those aimed at eliciting cytotoxic T cell (CTL) responses against tumour or virus- infected cells.
  • CTL cytotoxic T cell
  • CD8a + DC can also induce CTL
  • DNGR-1 is a C-type lectin which has recently been identified as a novel marker for mouse CD8 + DC (Caminschi et al . , 2008;
  • the present inventors have identified DC which express DNGR-1 (DNGR-1 DC) in human secondary lymphoid tissues, specifically in primary human spleen.
  • DNGR-1 DC DNGR-1 DC
  • only a low yield of such cells could be obtained, due to restricted access to tissue, paucity of DC in samples, and difficulty in recovering live cells from frozen samples.
  • HSCs hematopoietic stem cells
  • immunotherapeutic methods including antigen pulsing and adoptive transfer approaches.
  • the invention provides a method of obtaining a dendritic cell population comprising one or more DNGR-1 4 DC, the method comprising the step of contacting a HSC with a differentiation cocktail ex vivo or in vitro, wherein the differentiation cocktail contains a) GM-CSF (granulocyte- macrophage colony stimulating factor) , IL.-4 (Interleukin-4) , and Flt3L (Fms-related tyrosine kinase 3 ligand) ; or b) GM- CSF, IL-4 and TGF- ⁇ (Transforming growth factor ⁇ ) . It may also be desirable to contact the HSC with one or more stem cell viability factors.
  • GM-CSF granulocyte- macrophage colony stimulating factor
  • IL.-4 Interleukin-4
  • Flt3L Flt3L
  • GM- CSF granulocyte- macrophage colony stimulating factor
  • TGF- ⁇ Transforming growth factor ⁇
  • Stem cell viability factors are useful to maintain stem cell viability.
  • HSCs may be co- cultured with stromal elements supportive of HSC survival or cultured in media conditioned by being previously inoculated onto stromal feeder layers which secrete factors and proteins conducive to the maintenance and survival of HSCs.
  • SCF stem cell factor
  • Thrombopoie in (TPO) Pleiotrophin, HoxB4, HoxA9 , Wnt3a, Notchl and Jagged-1.
  • Factors such as Thrombopoietin,
  • Pleiotrophin, HoxB4 , HoxA9, Wnt3a, Notchl and Jagged-1 may be used alone, or in combination. These factors may be used alone or in combination with one another. For example, any one or more of TPO, Pleiotrophin, HoxB4 , HoxA , Wnt3a, Notchl and Jagged-1 may be used in combination with SCF. It may be desirable to replenish or renew the differentiation cocktail periodically. Thus the differentiation cocktail may be replenished during the contacting step. The differentiation cocktail will typically be replenished once, but may be replenished twice, three times, four times or more if desired e.g every 5, 6, 7 or 8 days.
  • the HSCs may be contacted with the differentiation cocktail for as long as required for emergence of DNGR- 1 + DC. Typically they will be contacted with the differentiation cocktail for at least 6 days, e.g. at least 7, at least 8, at least 9, at least 10 days, or at least 21 days; e.g. up to 10 days, up to 11 days, up to 12 days, up to 13 days, up to 14 days, up to 15 days, up to 16 days, up to 17 days, up to 18 days, up to 19 days, or up to 21 days.
  • HSCs for use in the claimed method may be obtained from any suitable source.
  • Sources include but are not limited to embryonic yolk sac, the embryonic aorta-gonad-mesonephrous region, fetal liver or spleen, adult spleen, adult bone marrow, fetal bone marrow, peripheral blood and umbilical cord blood.
  • the method may comprise the preliminary step of providing a sample containing HSCs.
  • the HSCs may be from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as a rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat.
  • rodent e.g. mouse, rat or guinea pig
  • lagomorph e.g. rabbit
  • the HSCs are human.
  • the HSCS are derived from a human donor.
  • the sample may be contacted directly with the differentiation cocktail.
  • the method may additionally comprise providing a first cell population comprising one or more HSCs, and expanding the number of HSCs in the first cell population, prior to contacting the cell population with the differentiation cocktail.
  • the expansion step may comprise, for example, contacting said first cell population with one, more than one, or all of SCF, Flt3L, IL-3 (Interleukin-3 ) and IL-6 (Interleukin-6) .
  • Other factors such as Thrombopoietin, Pleiotrophin, HoxB4 , HoxA9, Wnt3a, Notchl and Jagged- 1 may be used alone or in combination, particularly in combination with SCF.
  • the dendritic cell population obtained by contacting HSCs with the differentiation cocktail may additionally include other cell types, including dendriti cells that do not express DNGR-1, such as cells which express one or more of BDCA2 , IRF4, TLR7 and TLR9. Such cells may be plasmacytoid dendritic cells (pDC) .
  • pDC plasmacytoid dendritic cells
  • the invention also relates to methods of obtaining DNGR- 1 + DC from rodents having xenogeneic immune cells (i.e. immune cells from another species) .
  • the rodent is typically
  • the invention provides a method of obtaining a dendritic cell population comprising one or more DNGR-1 + DC, the method comprising a) obtaining cells from the lymphoid tissue of a rodent
  • the method may further comprise the step of reconstituting the rodent.
  • the method of the invention may further comprise a) providing an immunocompromised rodent; and b) introducing xenogeneic immune cells into said rodent.
  • the rodent may thus be reconstituted with xenogeneic immune cells which may be obtained from HSCs.
  • the step of isolating DNGR- 1 + DC may additionally comprise positive selection for cells expressing BDCA3 and/or HLA-DR.
  • the rodent may be a mouse, for example, a NOD/SCID mouse, particular a NOD/SCID/ ⁇ 2 m null mouse or a NOD/SCID/yc nul mouse .
  • the xenogeneic HSCs may be derived from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as another species of rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat.
  • rodent e.g. mouse, rat or guinea pig
  • lagomorph e.g. rabbit
  • the lymphoid tissue may be taken from any suitable lymphoid organ but will often be derived from the spleen. Whichever of the above-described methods is used to provide the DC population, a DC population is obtained which comprises one or more DNGR- l + DC.
  • the method may additionally comprise the step of isolating a DNGR- 1 * DC, or a population thereof.
  • a DNGR- 1 + DC, or population thereof may be isolated by contacting the cells with a binding agent capable of binding to DNGR- 1.
  • Antibodies directed against (e.g. specific for) DNGR-1, and functional fragments of such antibodies having an antibody binding site, are particularly suitable for use as binding agents.
  • the binding agent or antibody may be provided on a solid support (such as a particle or bead, e.g. a magnetic bead) to facilitate isolation of the desired cells.
  • a solid support such as a particle or bead, e.g. a magnetic bead
  • the step of isolating DNGR-1 * DC may be performed using cell sorting techniques such as flow
  • cytometry e.g. FACs.
  • the method may additionally comprise positive selection for cells expressing BDCA3 (BDCA3 * DC) and/or HLA-DR, e.g. using a binding agent (such as an antibody or antibody fragment) having the ability to bind to BDCA3 or
  • the invention provides a dendritic cell population comprising one or more DNGR-1 * DC as obtainable by any one of the methods of the invention as described above. 000623 Having been isolated to the desired level of purity, the DNGR- 1 + DC isolated by the methods described above may find
  • the cells may be administered directly to a subject, or formulated for administration to a subject
  • the invention provides a dendritic cell population as obtained or obtainable by any of the methods of the invention as described above, for use in a method of medical treatment.
  • the invention further provides a dendritic cell population as obtained or obtainable by any of the methods of the invention, for use in the treatment of any suitable condition as described in more detail below.
  • the invention further provides the use of a dendritic cell
  • the DNGR- 1 + DC may be desirable to expose the DNGR- 1 + DC to an antigen in order to enable that antigen to be presented to T cells. This approach is sometimes described as "antigen pulsing" . It may be desirable that the antigen is thus cross -presented to T cells via MHC class I molecules.
  • the invention further provides a method comprising contacting the DC population obtained or obtainable by the methods described above in vitro or ex vivo with an antigen.
  • the DC population may also be contacted with an adjuvant.
  • Contacting may take place in vitro, for example at or
  • the antigen-pulsed DC population may then be administered to a subject, or formulated for administration to a subject.
  • the subject may be the same individual from whom the HSCs were originally derived.
  • the invention provides an antigen-pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention as described above, for use in a method of medical treatment.
  • the invention further provides an antigen- pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention, for use in the treatment of any suitable condition as described in more detail below.
  • the invention further provides the use of an antigen-pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention, in the preparation of a
  • the antigen-pulsed DC population may further be contacted with T cells in vitro or ex vivo in order to generate or stimulate T cells (particularly CTLs, but also helper T cells or Tregs) specific for the antigen.
  • T cells in the population may be allowed to expand in culture in order to increase the number or proportion of T cells in the population which are specific for the antigen.
  • the T cells may then be administered to a subject or formulated for such administration.
  • the T cells are separated from other cells in the population before administration.
  • the dendritic cells and T cells may also be contacted with an adjuvant. The nature of the adjuvant may be selected
  • the T cells and dendritic cells are autologous, i.e. they are derived from the same subject, or from
  • the T cells may be re-administered to the subject from whom they (or their progenitors) were derived.
  • an adjuvant may be administered with the T cells.
  • the invention provides a population of T cells as obtained or obtainable by the above methods, for use in a method of medical treatment.
  • the invention further provides such a population of T cells, for use in the treatment of any suitable condition as described in more detail below.
  • the invention further provides the use of such a population of T cells in the preparation of a medicament for the treatment of any suitable condition as described in more detail below.
  • FIG. 1 Flow cytometry analysis of human spleen cell suspensions from cadaveric donors. Live HLA-DR + Lin " cells were gated as shown (upper left panel) and analyzed for expression of BDCA3 versus DNGR-1 (upper right panel) . Three populations were defined (gate I: BDCA3 hi , DNGR- 1 + ; gate II: BDCA3 int , DNGR-1 " ; gate III: BDCA3 " , DNGR-1 " ) and analyzed for the expression of CDllc versus BDCA1, BDCA2 or CDllb (lower panels) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. Arrows show gating strategy. (B) Normalized
  • BDCA2 BDCA1
  • DCs from human spleen, expressing high (BDCA3 hi ) , intermediate (BDCA3 int ) , or low levels of BDCA3
  • DNGR-1 + BDCA3 DC are found in the spleens of humanized mice HLA-DR + Lin " live spleen cells from humanized mice were analyzed as in Figure 1 for the expression of BDCA3 versus BDCA2 (upper right) , BDCA3 versus DNGR-1 (middle left) , and BDCA2 versus DNGR-1 (middle right) .
  • the scatter profile of BDCA3 + and BDCA2 + cells is also shown (lower panels) . Numbers indicate
  • CBDCs were generated as described in the methods. Live cells were analyzed for the expression of BDCA3 versus DNGR-1 (A) , CDla versus DNGR-1 (B, left panel) and CDla versus HLA-DR (B, middle panel) . Gated CDla + HLA-DR + cells were analyzed for the expression of BDCA3 versus DNGR-1 (B, right panel) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. (C) CBDCs were treated with or without poly I:C (10 ⁇ g/ml) overnight and subsequently sorted into live HLA-DR + Lin ⁇ DNGR- 1 + cells.
  • DNGR-1 + BDCA3 + DCs display a gene expression profile characteristic of mouse CD8a + DCs
  • BDCA3 + DNGR-1 + DCs purified either from CBDCs or from pooled spleens of 2 to 5 humanized mice (hu mice) . Expression was compared to that of BDCA2 + pDCs purified from the same humanized mouse spleens. Data are representative of 2 independent experiments.
  • DNGR-1 + BDCA3 + DCs respond to TLR3 and TLR8 but not TLR7 agonists
  • BDCA3 + DNGR- 1 + DCs from CBDCs (DNGR-1 + CBDCs) or from humanized mice (DNGR-1 + hu mice) , or BDCA2 + pDCs from the same humanized mice (BDCA2 + hu mice) , were cultured with poly I:C (10pg/ml) , imiquimod (lC ⁇ g/ml) or medium alone. After overnight incubation, culture supernatant was tested for TNP- and IL-6 content.
  • DNGR- 1 + CBDCs as in (A) were cultured with resiquimod (lOpg/ml) , poly U (10pg/ml) or medium alone. Supernatant was tested for IL-6 after overnight culture.
  • C 5xl0 3 DNGR- 1 + BDCA3 * DCs purified from CBDCs (DNGR-1 * CBDCs) or human spleen (DNGR-1 + hu spleen) were cultured with a mix of TLR agonists and cytokines with or without T cells and antigen, as described in the methods. Supernatant was tested for IL-12p70 after overnight culture. Data are representative of at least 2 independent experiments with independent sources of cells. ND, not detectable . Figure 6. DNGR-1 + BDCA3 + DCs efficiently capture dead-cells and cross-present exogenous antigens
  • DNGR- 1 + BDCA3 + DC could be obtained after culture with SCF, Flt3L, GM-CSF and IL-4.
  • DNGR- 1 + BDCA3 + DC could also be obtained by substituting Flt3L for TGF- ⁇ .
  • Figure 8 In vitro generation of DNGR-1 + DC with the GM-CSF, IL-4, TGF- ⁇ differentiation cocktail
  • CBDCs were generated as described in the methods. Live cells were analyzed for the expression of BDCA3 versus DNGR-1 at day 6 of culture. Numbers indicate percentage of cells in each of the specified gates. Data shown are representative of multiple CBDC cultures with 2 independent pools of cord blood derived
  • Figure 9 Flow cytometry analysis of human spleen cell suspensions from cadaveric donors
  • Live HLA-DR + Lin " cells (same as in Fig. 1) were analyzed for expression of CDllc versus DNGR-1 (upper panel) . Three populations were identified (gate I: CDllc + , DNGR-1 + ; gate II: CDllc ⁇ DNGR-1 " ; gate III: CDllc " , DNGR-1 " ) and analyzed subsequently for the expression of BDCA3 versus BDCAl, BDCA2 , or CDllb (lower panels) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. Data are
  • DNGR-1 * BDCA3 + CBDCs do not express CD14 and do not develop in the absence of SCF, GM-CSF, Flt3L or IL-4
  • Numbers indicate percentage of cells in each of the indicated gates or quadrants.
  • Bulk CBDCs were cultured with poly I:C (l( ⁇ g/ml) , imiquimod (lOpg/ml) or medium alone. After overnight incubation, culture supernatant was tested for TNF- content (left) or the cells were recovered and live DNGR-l * BDCA3 + DC tested for expression of HLA-DR (right; mean fluorescence intensity of HLA-DR staining) . Data are representative of 2 independent
  • NK lectin group receptor 1 (DNGR-1) (also known as Clec9a - see for example WO2009/013484 ) is a C-type lectin expressed on certain dendritic cells.
  • extracellular is meant that the antigen has been taken up by the cell from its extracellular environment, typically by endocytosis or phagocytosis .
  • DNGR-1 is intended to embrace the human protein, the murine protein, their
  • variants and derivatives preferably have at least about 30% sequence identity, more preferably at least about 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95% sequence identity to the human protein sequence shown below, or at least about 35% identity, more preferably at least about 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95% identity to the extracellular domain (CTLD) of the human protein sequence shown below.
  • CTLD extracellular domain
  • DNGR-1 is highly restricted to BDCA3 + DC among peripheral blood mononuclear cells (Caminschi et al . , 2008; Huysamen et al . , 2008; Sancho et al . , 2008).
  • BDCA3 is one of a group of markers known as Blood DC Antigens (BDCA) which enable distinct DC subsets to be phenotypically identified in human blood (Dzionek et al . , 2000) .
  • BDCA3 marks a small subset of DC that appear myeloid in origin (Déek et al . , 2000;
  • BDCA2 appears to be a marker for circulating human pDC and is not believed to be expressed on DNGR- 1 + DC.
  • DNGR-1 * DC also express HLA-DR, which is a general marker for antigen presenting cells, and it is believed that DNGR-1 + BDCA- 3 + HLA-DR * cells are a distinct phenotypic population of cells in humans.
  • DNGR- 1 * DC express Necl2 and do not express CD14 or CDllb distinguishing these cells from other DC subsets.
  • Murine CD8a + DC express TLR9, CD103 and CD8 but it appears that human DNGR- 1 cells do not express TLR9 , CD103 or CD8 , or express them only at very low levels.
  • the dendritic cell population obtained by the methods of the invention may additionally include dendritic cells that do not express DNGR-1, such as cells which express one or more of BDCA2, IRF4, TLR7 and TLR9. Such cells may be plasmacytoid dendritic cells (pDC) .
  • BDCA2 + pDC respond to imiquimod but not poly I:C
  • DNGR- 1 + DC respond to poly I:C but not
  • DNGR- 1 + BDCA3 + DC and pDC have reciprocal patterns of response to TLR7 vs. TLR3 agonists, which could be exploited in vaccination strategies designed to mobilize one and/or the other cell type in the DC population.
  • HSCs Hematopoietic stem cells
  • HSCs Hematopoietic stem cells
  • myeloid monocytes and macrophages, neutrophils, basophils, eosinophils, erythrocytes,
  • HPCs hematopoietic precursor cells
  • HPCs hematopoietic progenitor cells
  • MPPs hematopoietic multipotent progenitor cells
  • a multilineage hematopoietic system when introduced into an immunodeficient host.
  • a multilineage hematopoietic system will contain all blood cells and their progenitors.
  • the positive expression or negative expression (expression profile) of certain cell surface proteins may be used to identify HSCs with the potential to differentiate into DNGR- 1 + DC.
  • HSCs are lineage negative (Lin " ) i.e they do not express lineage- specific markers such as CD3 , CD14, CD16, CD19, CD20 and CD56. They may also not express CD38, or only at low levels (CD38 _ 1 °- ) . They typically express CD34 + .
  • HSCs obtained from any source are suitable for use in the current method.
  • Sources of HSCs include any tissue which contains any amount of HSCs. These tissues may include but are not limited to embryonic yolk sac, the embryonic aorta-gonad- mesonephrous region, fetal liver or spleen, adult spleen, adult and fetal bone marrow, untreated peripheral blood and umbilical cord blood.
  • HSCs can also be mobilised into the peripheral blood and spleen tissue from the bone marrow by B2011/000623 cytokine treatment, e.g. with G-CSF (granulocyte-macrophage colony stimulating factor) or GM-CSF, and optionally
  • G-CSF granulocyte-macrophage colony stimulating factor
  • GM-CSF granulocyte-macrophage colony stimulating factor
  • the HSCs may be from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as a rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat.
  • the HSCs are human.
  • the HSCS are derived from human donors. It may be desirable to enrich a sample for HSCs.
  • HSCs suitable for use in the methods of the invention may be purified from a sample by any suitable technique or device. Positive or negative selection may be employed to enrich for, or deplete of, respectively cells expressing certain surface proteins associated with particular cell lineages or stages of
  • HSCs are lineage negative
  • a sample of cells can be enriched for HSCs by negative selection for cells expressing one or more lineage specific markers (CD3, CD14, CD16, CD19,
  • CD20 and CD56 CD20 and CD56
  • the expansion step may occur before or after the cell population is enriched for HSCs.
  • the expansion step may comprise, for example, culturing in hematopoietic bioreactors (see Cabrita et al . , 2003), or co-culturing with stromal elements supportive of HSC expansion/survival , or culturing in media conditioned by being previously inoculated onto stromal feeder layers which secrete factors and proteins conducive to the maintenance, survival and expansion of HSCs.
  • the expansion step may comprise
  • contacting said first cell population with one or more of SCF, Flt3L, IL-3 and IL-6 for example, contacting said first cell population with one or more of SCF, Flt3L, IL-3 and IL-6.
  • Differentiation cocktail The term “differentiation cocktail” is used in this specification.
  • cytokines and/or growth factors which are used to differentiate HSCs into DNGR- V DC.
  • Two such combinations of factors have been identified, namely (a) GM-CSP, IL-4 and Flt3, and (b) GM-CSF, IL-4 and
  • the differentiation cocktail is contacted with HSCs in vitro or ex vivo, but typically under cell culture conditions.
  • the culture medium may contain additional factors which have roles other than promoting differentiation of HSCs to DNGR-1 + DC. These components are not regarded as part of the differentiation cocktail.
  • the culture medium may contain conventional cell culture components such as antibiotics (e.g. penicillin, streptomycin), nutrients (e.g. glutamine) , heat-inactivated fetal calf serum or similar, etc.
  • the culture medium may also contain components for maintenance of stem cell properties such as viability and/or potency;
  • SCF stem cell viability factors
  • SCF may be included in the culture medium but it does not constitute part of the differentiation cocktail.
  • SCF may be provided in a concentration of about 15-25 ng/ml, for example about 20 ng/ml.
  • TNFa can be used as an adjuvant at the antigen pulsing stage or at the stage of antigen presentation by a
  • the HSCs may remain in contact with the differentiation cocktail for at least 6 days, e.g. at least 7, at least 8, at least 9 or at least 10 days.
  • the contact may be maintained until sufficient differentiation has taken place.
  • contact will be maintained for up to 14 days, e.g. up to 10 days, up to 11 days, up to 12 days or up to 13 days.
  • longer exposure times may be employed if required, for example, up to 21 days or longer.
  • GM-CSF is provided at a concentration of about 15- 25 ng/ml, for example at about 20 ng/ml .
  • IL-4 is provided at a concentration of about 15-25 ng/ml, for example at about 20 ng/ml.
  • Flt3L is provided at a
  • TGF- ⁇ is provided at a concentration of about 8-12 ng/ml, for example at about 10 ng/ml.
  • the differentiation cocktail comprises about 20 ng/ml GM-CSF, about 20 ng/ml IL-4, and about 100 ng/ml Flt3L.
  • the differentiation cocktail comprises about 20 ng/ml GM-CSF, about 20 ng/ml IL-4, and about 10 ng/ml TGF- ⁇ .
  • An immunocompromised rodent suitable for use in the methods ⁇ the present invention has a deficient immune system enabling it to accept xenografts.
  • an immunocompromised rodent will not produce functional B and T lymphocytes or antibodies.
  • the immunocompromised rodent will preferably show defects in N cell activity and defects in innate immune effects.
  • the immunocompromised rodent may be reconstituted with tissue from another species without eliciting an immune response in said immunocompromised rodent.
  • the immunocompromised rodent may be reconstituted with stem cells from another species, without eliciting an immune response in said immunocompromised rodent .
  • a suitable immunocompromised rodent examples include the SCID mouse; SCID beige mouse; NOD/SCID mouse; NOD/SCID/ 2 m null mouse or NOD/SCID/yc null mouse.
  • the immunocompromised rodent may be sublethally irradiated.
  • the dose of radiation to be administered will depend on the size of the rodent and its susceptibility to radiation, but should be sufficient to deplete the rodent's immune cells without killing the rodent.
  • HSCs may be introduced by intraperitoneal or intrahepatic injections. HSCs may be injected directly into stem cell niches, such as bone marrow, or into the uterus. Placing HSCs in suitable haematopoietic microenvironments , such as newborn liver or bone marrow, may help progenitors to survive and engraft. Preferably HSCs are injected intravenously. HSCs may be obtained from the sources mentioned previously. Immune response
  • the cell population comprising DNGR-1 + DC may play a role in induction of various types of immune response, for example, those involving CD8 T cells or Treg cells. They may be particularly involved in immune responses caused by
  • DNGR-1 + DC can induce an immune response to a target antigen with which they have been contacted.
  • the immune response stimulated may be a Thl, Th2 , Thl7 or Treg response.
  • the immune response may be the proliferation of T cells, which may be CTL or helper T cells.
  • the immune response can be the proliferation of both CD8 + T cells and CD4 + T cells, and may involve the
  • the cell population comprising DNGR- 1 + DC may also stimulate and induce proliferation of Treg cells.
  • Treg cells are characterised by the expression of Foxp3. Most Treg cells are CD4 + and CD25 + , and can be regarded as a subset of helper T cells, although a small population may be CD8 + .
  • Treg cells may be capable of modulating the response of other cells of the immune system against an antigen in other ways, e.g. inhibiting or suppressing their activity, the effect on the immune system as a whole may be to modulate (e.g. suppress or inhibit) the response against that antigen.
  • an immune response can also comprise modulating the response to an antigen (e.g. inhibiting or suppressing) .
  • Treg response against an antigen to which a subject exhibits, or is at risk of developing, an undesirable immune response may be particularly desirable to raise a Treg response against an antigen to which a subject exhibits, or is at risk of developing, an undesirable immune response.
  • it may be a self antigen against which an immune response occurs in an autoimmune disease.
  • autoimmune diseases in which specific antigens have been identified as potentially pathogenically significant include multiple sclerosis (myelin basic protein) , insulin-dependent diabetes mellitus (glutamic acid decarboxylase) , insulin- resistant diabetes mellitus (insulin receptor) , coeliac disease (gliadin) , bullous pemphigoid (collagen type XVII) , auto- immune haemolytic anaemia (Rh protein) , auto- immune thrombocytopenia (GpIIb/lIIa) , myaesthenia gravis
  • the desired immune response may be against an extracellular antigen which stimulates a response which also causes damage to host tissues. For example, acute rheumatic fever is caused by an antibody response to a Streptococcal antigen which cross -reacts with a cardiac muscle cell antigen.
  • Treg cells or impairment of Treg cell function has been shown to result in autoimmune disease in murine models.
  • Disease caused in test animals include arthritis (e.g. rheumatoid arthritis), inflammatory bowel disease, gastritis, pernicious anaemia, thyroiditis, insulitis, diabetes, sialoadenitis, adrenalitis, autoimmune
  • Treg cells or impairment of function accelerates the rate of rejection, while infusion of test animals with syngeneic lymphocytes enriched in Treg cells has been shown to prolong graft survival.
  • the methods of the present invention may therefore find use in the treatment of any of these conditions .
  • the invention thus provides a method for inducing tolerance in a subject towards an antigen, comprising administering to the subject a
  • composition comprising the antigen and DNG -1 + DC, or antigen pulsed DNGR-1 + DC and wherein the antigen and/or DNGR- 1 + DC is administered or pulsed in the absence of an adjuvant.
  • DNGR- 1 + DC are believed to be particularly important in the generation of CTL responses, so the immune response to be stimulated is preferably a CTL response.
  • the immune response may involve production and/or proliferation of CTLs, which are typically T cells expressing CD8 and are capable of cytotoxic activity against cells displaying their cognate antigen in the context of HC class I molecules.
  • the cells produced by the methods of the invention may be used therapeutically or prophylactically to inhibit or suppress an undesirable immune response against a particular antigen, even in a subject with pre-existing immunity or an on-going immune response to that antigen.
  • Thi may be particularly useful (for example) in the treatment of autoimmune disease.
  • the cells produced by the methods of the invention may also be used for the prophylaxis and/or treatment of any condition in which it is desirable to induce a CTL response, such as cancer, or infection by an
  • intracellular parasite or pathogen such as a viral infection.
  • the magnitude of the immune response may be assessed by any appropriate criteria, such as appearance of inflammation, swelling, cell proliferation (e.g. of Thl, Th2 or Thl7 CD4 + T cells, or CTLs) or inflammatory cytokine production (e.g. IL- 1, IL-4, IL-12, IFN-gamma, TNF-alpha) .
  • cell proliferation e.g. of Thl, Th2 or Thl7 CD4 + T cells, or CTLs
  • inflammatory cytokine production e.g. IL- 1, IL-4, IL-12, IFN-gamma, TNF-alpha
  • the tolerised individual will display
  • the methods may utilize DNGR- 1 * DC to stimulate an immune response to a target antigen.
  • DNGR- 1 + DC can induce proliferation of both CD8 + T cells and CD4 + T cells (WO2009/013484) , and may stimulate proliferation of both types of T cell in any given immune response.
  • immunostimulatory agents in order to achieve maximal CTL stimulation and proliferation, and/or stimulation and
  • These may include agents capable of activating dendritic cells and stimulating their ability to promote T cell activation.
  • the adjuvant may comprise an agonist for CD40 (such as soluble CD40 ligand, or an agonist antibody specific for CD40) or an antagonist of CD40 (such as an anti-CD40 antibody), an agonist of CD28, CD27 or OX40 (e.g. an agonist antibody specific for one of those molecules), a CTLA-4 antagonist (e.g. a blocking antibody specific for CTLA-4) , and/or any other agent capable of inducing dendritic cell activation.
  • a Toll -like receptor (TLR) agonist is a substance which activates a Toll-like receptor. The application demonstrates that human DNGR- 1 + DC respond to TLR3 and TLR8 agonists.
  • suitable adjuvants include Poly I:C (polyinosine- polycytidylic acid), which binds TLR3 ; resiquimod (R-848; 1- [4-amino-2- (ethoxymethyl) imidazo [4 , 5-c] quinolin-l-yl] -2- methylpropan-2-ol 1- [4-amino-2 - (ethoxymethyl) imidazo [4 , 5- c] quinolin-l-yl] -2-methylpropan-2-ol) or polyU R A which bind TLR7 in mice and are believed to bind TLR8 in humans.
  • the TLR agonist is an activator of TLR3 and/or TLR8.
  • Adjuvants which may not work via TLRs include 5' triphosphat RNA, ⁇ -glucans such as curdlan ( ⁇ -l, 3-glucan) and poly I : C which can function independently of TLRs. Dectin-1 is also expressed by mouse CD8 + DC. Therefore the adjuvant may be a Dectin-1 agonist. Dectin-1 agonists include ⁇ -glucans such as curdlan ( ⁇ -l, 3-glucan) . It may also be desirable to administer an adjuvant during or after contacting the DC population with T cells; and/or before or after the T cells are administered to a subject. The adjuvant selected at this stage will also influence the immune response generated.
  • the adjuvant may comprise an agonist for CD40 (such as soluble CD40 ligand, or an agonist antibody specific for CD40) or an antagonist of CD40 (such as an anti- CD40 antibody), an agonist of CD28, CD27 or OX40 (e.g. an agonist antibody specific for one of those molecules) , a CTLA- 4 antagonist (e.g. a blocking antibody specific for CTLA-4) .
  • T cells respond to a number of TLR agonists.
  • Suitable TLR agonists include MPL (monophosphoryl lipid A) , which binds TLR4 ; LTA ( lipoteichoic acid, which binds TLR2 ; Poly I:C, which binds TLR3 ; flagellin, which binds TLR5 ; resiquimod (R- 848 ; 1- [4-amino-2- (ethoxymethyl ) imidazo [4 , 5-c] quinolin- 1-yl] - 2-methylpropan-2-ol 1- [4-amino-2- (ethoxymethyl) imidazo [4 , 5- c] quinolin-l-yl] -2 -methylpropan-2 -ol ) or polyU R A which bind TLR7 in mice and are believed to bind TL 8 in humans, and CpG (DNA CpG motifs) , which binds TLR9; or any other component which binds to and activates a TLR.
  • MPL monophospho
  • Adjuvants which may not work via TLRs include 5' triphosphate RNA, poly I:C, and ⁇ -glucans such as curdlan ( ⁇ -l, 3-glucan) .
  • Pro- inflammatory cytokines such as TNF-a or IL-1 may also be used as adjuvants.
  • TGF- ⁇ can act as an adjuvant promoting the conversion of naive T cells into antigen-specific Tregs in non-inflammatory conditions (Chen et al . , 2003; Coombes et al . , 2007; Luo et al . , 2007; Yamazaki et al . , 2008).
  • Treg cells include IL-12 and retinoic acid, and in particular all-trans retinoic acid (ATRA) , also known as trenitoin.
  • ATRA all-trans retinoic acid
  • TGF- ⁇ can act as an adjuvant promoting the conversion of naive T cells into antigen-specific Tregs in non- inflammatory conditions (Chen et al . , 2003; Coombes et al . , 2007; Luo et al . , 2007; Yamazaki et al . , 2008) .
  • the immune response to be stimulated is a Treg response it may be appropriate to use a Treg-promoting
  • DNGR- 1 + DC can stimulate both CD4 + T cells and CD8 + T cells, and the nature of the CD4 + response in particular may be affected by the adjuvant used.
  • use of poly I -. C appears to favour generation of a Thl-type CD4 + response.
  • Curdlan appears to stimulate a Thl7-type CD4 + response while the absence of an adjuvant may result in the development of tolerance to the antigen. That is to say, the immune system is induced not to respond to future administrations of the same antigen. This may (but need not) involve the generation of Treg cells which are capable of active suppression of the response. Thus further administrations of an antigen to a subject who has been tolerised to that antigen should result in a lesser immune response than in a subject who is naive for that antigen (i.e. whose immune system has not previously been exposed to the antigen) .
  • the methods of the invention may include contacting or
  • compositions comprising a cell, or population of cells with an adjuvant, either sequentially or simultaneously, in the same or separate compositions.
  • methods of the invention may, but need not, comprise contacting or administering with an adjuvant.
  • the methods of the invention may be used to raise an immune response against a target antigen.
  • the antigen may be any protein or fragment thereof against which it is desirable to raise an immune response, in particular a CTL response, but also a Thl7 response or a Treg response. These may include antigens associated with, expressed by, displayed on, or secreted by cells against which it is desirable to stimulate a CTL response, including cancer cells and cells containing intracellular pathogens or parasites.
  • the antigen may be, or may comprise an epitope peptide from a protein expressed by an intracellular pathogen or parasite (such as a viral protein) or from a protein expressed by a cancer or tumour cell.
  • the antigen may be a tumour- specific antigen.
  • the term "tumour-specific" antigen should not be interpreted as being restricted to antigens from solid tumours, but to encompass antigens expressed specifically by any cancerous, transformed or malignant cell.
  • the Treg response will be to inhibit or suppress an immune response against an antigen.
  • it may be a self antigen against which an immune response occurs in an
  • autoimmune disease examples of autoimmune diseases in which specific antigens have been identified as potentially
  • pathogenically significant include multiple sclerosis (myelin basic protein) , insulin-dependent diabetes mellitus (glutamic acid decarboxylase) , insulin-resistant diabetes mellitus (insulin receptor) , coeliac disease (gliadin) , bullous pemphigoid (collagen type XVII) , auto-immune haemolytic anaemia (Rh protein) , auto- immune thrombocytopenia
  • Graves' disease thyroid- stimulating hormone receptor
  • glomerulonephritis such as Goodpasture's disease
  • the target antigen may be an exogenous antigen which stimulates a response which also causes damage to host tissues.
  • acute rheumatic fever is caused by an antibody response to a Streptococcal antigen which cross-reacts with a cardiac muscle cell antigen.
  • these antigens, or particular fragments or epitopes thereof may be suitable antigens for use in the present invention.
  • the antigen is a peptide antigen.
  • peptide refers to the nature of the antigen, i.e. that it is formed from amino acids linked by peptide bonds, and should not be taken to imply any particular size or length.
  • the peptide antigen will be at least 8 amino acids in length, and may be up to 30 amino acids in length, up to 50 amino acids in length, up to 100 amino acids, up to 200 amino acids, or even longer and may have residues coupled to the amino acids, such as glycon chains. For example, it may be 25 to 35 amino acids in length.
  • the peptide antigen should be capable of binding to a MHC class II or MHC Class I molecule, or should be capable of being processed within an antigen-presenting cell (such as a dendritic cell) to give rise to one or more peptides capable of binding to a MHC class II molecule or MHC Class I molecule.
  • an antigen-presenting cell such as a dendritic cell
  • short epitope peptides of around 8 amino acids in length may induce less sustained CTL reactivity than longer peptides (e.g. around 30 amino acids in length) (Bijker, M.S. et al . J. Immunol. 179(8), 5033-5040 (2007) ) .
  • MHC class I molecules typically bind peptides of 8 or 9 amino acids in length
  • MHC class II molecules can bind peptides from 8 amino acids up to 20 amino acids, up 30 amino acids, or even longer.
  • the therapeutic application of the various cells and medicaments will depend on the identity of the antigen and any adjuvant which is used and the nature of the immune response required. For example, they may be used for the treatment of cancer, or for the treatment of an infection with a parasite or a pathogen . Alternatively they may be used in the treatment of an
  • the condition to be treated may be selected from: - autoimmune diseases, including rheumatoid arthritis and other types of chronic or acute arthritis or arthropathies with an immune component, systemic lupus erythematosus (which is known to involve particularly high levels of cell death) , scleroderma, Sjogren syndrome, autoimmune (particularly Type I) diabetes, thyroiditis, and other organ- specific immune diseases, including psoriasis;
  • myasthenia gravis and other neurologic immune-mediated diseases. Also included are gastrointestinal diseases, including Crohn's disease, colitis, celiac disease and hepatitis ;
  • cardiovascular diseases cardiovascular diseases; - immune-mediated respiratory diseases, including emphysema, respiratory airways infections, and other immune-mediated respiratory diseases;
  • tissue graft transplant, tissue graft, blood transfusion, bone marrow transplant ;
  • Any suitable molecule having a sufficiently high affinity and specificity for the relevant target molecule may be used as a binding agent.
  • the target molecule may be referred to as its binding partner.
  • the binding agent may be a protein, nucleic acid (e.g an aptamer) , carbohydrate (e.g. oligo- or polysaccharide), small molecule, etc.
  • Particularly preferred binding agents are antibodies and functional fragments thereof .
  • the binding agent preferably has a binding affinity (affinity constant) for its binding partner of at least 10 5 M "1 , at least 10 6 ⁇ _1 , at least lO'M "1 , preferably at least 10 8 M _1 , more
  • the binding agent has the relevant degree of affinity for the extracellular domain (ECD) .
  • ECD extracellular domain
  • the binding agent preferably has an affinity at least 2x, and preferably at least 5x, at least lOx, at least 50x or at least lOOx greater than for any other molecule, including other C- type lectins in the case of binding agents for DNGR-1.
  • an antigen e.g. a protein or peptide antigen
  • a binding agent as described, e.g. in order to target or deliver the antigen to the DNG -1 + DC.
  • the binding agent is a protein
  • the antigen may be coupled via a
  • the sulphydryl group may normally be free, or it may normally be part of a
  • an antibody can be mildly reduced selectively in the hinge region using the reducing agent mercaptoethanosulfonate .
  • the antigen is activated using sulpho-SMCC, an hetero-bifunctional cross- linking reagent that reacts with the tertiary amines of the protein, generating groups reactive with free sulphydryls.
  • the antibody and the activated antigen are incubated together resulting in the protein being conjugated to the monovalent antibody.
  • a suitably immunogenic peptide sequence from the antigen is known, such a peptide containing a cysteine with a free sulphydryl can be
  • fragments of a whole antibody can perform the function of binding antigens.
  • functional binding fragments are (i) the Fab fragment
  • antibody should therefore be construed as covering any specific binding substance having a binding domain with the required specificity.
  • this term covers the antibody fragments described above, as well as derivatives, functional equivalents and homologues of antibodies, including any polypeptide comprising an immunoglobulin binding domain, whether natural or synthetic.
  • Chimaeric molecules comprising an immunoglobulin binding domain, or equivalent, fused to another polypeptide are therefore included. Cloning and expression of chimaeric antibodies are described in EP-A- 0120694 and EP-A- 0125023.
  • binding agents used in the methods described herein are generally required to bind the extracellular domain of DNGR-1 in order to exert the required effect.
  • Reference to a binding agent capable of binding DNGR- 1 should be construed accordingly, unless the context allows otherwise .
  • the methods of the invention may be used in the manufacture of medicaments.
  • the medicament may be formulated as
  • compositions may comprise, in addition to one of the above substances, a pharmaceutically acceptable excipient, carrier, buffer, stabiliser or other materials well known to those skilled in the art. Such materials should be non-toxic and should not interfere with the efficacy of the active ingredient.
  • a pharmaceutically acceptable excipient e.g. oral, intravenous, cutaneous or other materials well known to those skilled in the art.
  • Such materials should be non-toxic and should not interfere with the efficacy of the active ingredient.
  • the precise nature of the carrier or other material may depend on the route of administration, e.g. oral, intravenous, cutaneous or
  • compositions for oral administration may be in tablet, capsule, powder or liquid form.
  • a tablet may include a solid carrier such as gelatin or an adjuvant.
  • Liquid pharmaceutical compositions generally include a liquid carrier such as water, petroleum, animal or vegetable oils, mineral oil or synthetic oil. Physiological saline solution, dextrose or other saccharide solution or glycols such as ethylene glycol , propylene glycol or polyethylene glycol may be included.
  • the active ingredient will be in the form of a parenterally acceptable aqueous solution which is pyrogen- free and has suitable pH,
  • isotonicity and stability are well able to prepare suitable solutions using, for example, isotonic vehicles such as Sodium Chloride Injection, Ringer's Injection, Lactated Ringer's Injection.
  • Preservatives, stabilisers, buffers, antioxidants and/or other additives may be included, as required.
  • Administration is preferably in a "prophylactically effective amount” or a “therapeutically effective amount” (as the case may be, although prophylaxis may be considered therapy) , this being sufficient to show benefit to the individual.
  • the actual amount administered, and rate and time-course of administration, will depend on the nature and severity of what is being treated. Prescription of treatment, e.g. decisions on dosage etc, is within the responsibility of general practitioners and other medical doctors, and typically takes account of the disorder to be treated, the condition of the individual patient, the site of delivery, the method of administration and other factors known to practitioners.
  • compositions may be administered alone or in combination with other treatments, either simultaneously or sequentially dependent upon the condition to be treated.
  • a conservative substitution may be defined as a substitution within an amino acid class and/or a substitution that scores positive in the BLOSUM62 matrix.
  • the amino acid classes are acidic, basic, uncharged polar and nonpolar, wherein acidic amino acids are Asp and Glu; basic amino acids are Arg, Lys and His; uncharged polar amino acids are Asn, Gin, Ser, Thr and Tyr; and non-polar amino acids are Ala, Gly, Val, Leu, lie, Pro, Phe, Met, Trp and Cys .
  • the amino acid classes are small hydrophilic, acid/acid amide/hydrophilic , basic, small hydrophobic and aromatic, wherein small hydrophilic amino acids are Ser, Thr, Pro, Ala and Gly;
  • acid/acidamide/hydrophilic amino acids are Asn, Asp, Glu and Gin; basic amino acids are His, Arg and Lys; small hydrophobic amino acids are Met, lie, Leu and Val; and aromatic amino acids are Phe, Tyr and Trp
  • Percent (%) amino acid sequence identity with respect to a reference sequence is defined as the percentage of amino acid residues in a candidate sequence that are identical with the amino acid residues in the reference sequence, after aligning the sequences and introducing gaps, if necessary, to achieve the maximum percent sequence identity, and not considering any conservative substitutions as part of the sequence identity.
  • % identity values may be determined by WU-BLAST-2 (Altschul et al., Methods in Enzymology, 266:460-480 (1996)) .
  • a % amino acid sequence identity value is determined by the number of matching identical residues as determined by WU-BLAST-2, divided by the total number of residues of the reference sequence (gaps introduced by WU-BLAST-2 into the reference sequence to maximize the alignment score being ignored), multiplied by 100.
  • Example 1 Isolating DNGR-1 + BDCA3 + DC from human spleen
  • Mouse CD8a + DC have been primarily isolated from spleen and we asked if the latter organ in humans contains DNGR- 1 + BDCA3 + DC.
  • Human DC could be identified in all the samples by flow cytometry as HLA-DR + cells lacking the lineage (Lin) specific markers CD3 , CD14, CD16, CD19, CD20 and CD56 (Fig. 1A, top left panel) .
  • DNGR- 1 was found to be expressed exclusively by BDCA3 hl DC (population I in Fig.
  • human spleen DNGR- 1 + BDCA3 h DC were negative for CDllb and expressed slightly lower levels of CDllc than other DC (Fig. 1A and Fig. 9) .
  • Human spleen DNGR-1 + BDCA3 hi DC also did not express BDCA2 , the pDC marker, or BDCA1 (CDlc) , a more promiscuous marker also used to define human DC subtypes (Fig. 1A and Fig. 9) .
  • BDCA3 lnt populations II in Fig. 1A, top right panel
  • BDCA3 " DC were relatively homogeneous and were mostly negative for CDllc, CDllb, BDCA1 and BDCA2 (Fig. 1A)
  • the BDCA3 int population was heterogeneous and included CDllc " BDCA2 + pDC that lacked CDllb and DNGR-1.
  • BDCA3 in cells also included CDllc + DC that variably expressed BDCA1, BDCA2 and CDllb (Fig. 1A and Fig. 9) .
  • BDCA1 " BDCA2 " cells into BDCA3 hi , BDCA3 int and BDCA3 " populations.
  • BDCA3 hi DC expressed mRNA for DNGR-1, Necl2 and IRF8 (Fig. IB), similar to mouse CD8 + DC.
  • BDCA3 int and BDCA3 ⁇ DC expressed low or undetectable levels of DNGR-1, Necl2 and IRF8 mRNA (Fig. IB) .
  • BDCA3 can mark multiple human DC subsets, including pDC, but, at high levels of expression and especially in combination with DNGR-1, marks a discrete population of putative CD8 + DC equivalents in human spleen .
  • Example 2 Obtaining DNG -1 + DC from the lymphoid tissue of mice reconstituted with human stem cells
  • HLA-DR + Lin " human DC were found in the spleens of all mice at 8-12 weeks following reconstitution independently of the host mouse strain (Fig 2 and data not shown) .
  • distinct DC subsets could be defined on the basis of BDCA2, BDCA3 and DNGR-1 expression. They included DNGR-1 " BDCA3 " BDCA2 " DC, as well as DNGR-1 " BDCA3 int BDCA2 + cells that corresponded to pDC. Notably, a separate population of cells that were
  • DNGR- 1 + BDCA3 hi cells were larger than BDCA2 * pDC (Fig. 2) and resembled the ones in human spleen (see above) .
  • DNGR- 1 + BDCA3 hi DC can be found in the spleens of humanized mice, in addition to those of humans .
  • Example 3 Obtaining DNGR-1 * DC from human stem cells in vitro
  • HSCs were amplified by culture in the presence of SCF, Flt3L, IL-3 and IL-6.
  • the expanded cells were then aliquoted and tested in a variety of differentiation conditions for the ability to generate DNGR-1 + BDCA3 + DC.
  • a number of factors were tested in different combinations (Fig. 7) .
  • SCF was included to maintain HSC viability. Notably, we found that DNGR- 1 + BDCA3 * DC could be obtained after culture with SCF,
  • Example 4 DNGR-1 + DC derived from HSCs and mouse CD8a + DC express similar markers
  • DNGR-1 + BDCA3 + human DC and mouse CD8 + DC we analyzed the expression of selected gene products by quantitative PCR.
  • DNGR- 1 + DC purified from bulk CBDC cultures or from the spleens of humanized mice expressed mRNA for DNGR-1, Necl2 and IRF8 (Fig. 4) .
  • IRF8 (and DAP12) was expressed at higher levels by BDCA2 + pDC isolated in parallel from humanized mice (Fig. 4) , consistent with data in the mouse (Schiavoni et al . , 2002) .
  • the same pDC did not express Necl2 or DNGR-1 (Fig. 4) . Similar to mouse CD8a +
  • DNGR- 1 + DC was expressed by pDC (Fig. 4). This is different from the situation with mouse CD8 + DC, which express TLR9.
  • DNGR- 1 + DC but not pDC taken from humanized mice expressed TLR3 and TLR8 (Fig. 4) .
  • DNGR-1 * cells from CBDC cultures only expressed very low levels of the same TLRs (Fig. 4), possibly due to immaturity. Consistent with the latter, DNGR-1 * CBDC upregulated TLR3 and TLR8 (but not TLR7) upon treatment with type I interferon, a known inducer of nucleic acid-sensing TLRs (data not shown) .
  • Mouse CD8 + DCs express TLR3 but not TLR7 mRNA and respond to poly I:C, a TLR3 (and MDA5/RIG-I) agonist, but not to imiquimod (R837) , an agonist for TLR7 (Edwards et al . , 2003).
  • DNGR-1 + DC from CBDC cultures or from humanized mouse spleen and stimulated them with poly I:C or imiquimod.
  • DNGR- 1 + DC Independently of the source, DNGR- 1 + DC consistently responded to poly I:C but not imiquimod with production of TNF, IL-6 and other cytokines (Fig. 5A and data not shown) .
  • Example 6 Human DNGR-1 + DC produce IL-12 in response to innate and T cell-derived stimuli
  • mouse CD8a + DC A hallmark of mouse CD8a + DC is their ability to produce high levels of IL-12 in response to TLR agonists, especially in synergy with signals through the CD40, IL-4, G -CSF or IFN- ⁇ receptors (Shortman and Heath, 2010) .
  • DNGR- 1 + DC purified from CBDC cultures produced no IL-12 p70 above background in response to stimulation with a cocktail of TLR agonists, even when these were given together with IL-4 and IFN- ⁇ , as well as antigen-specific T cells (Fig. 5C) . However, the same cells produced IL-12 p70 when antigen was added to the cultures (Fig. 5C) .
  • DNGR- 1 + DC isolated directly from human spleen cell suspensions (Fig. 5C) .
  • coordinate delivery of innate and T cell derived stimuli reveals the ability of DNGR- 1 + BDCA3 + DC to produce bioactive IL-12.
  • Example 7 DNGR-1 + DC internalize dead cell material and cross- present exogenous proteins to CD8 + T cells
  • mouse CD8 + DC Another attribute of mouse CD8 + DC is their superior capacity to internalize debris from dead or dying cells (Iyoda et al . , 2002 ; Schulz and Reis e Sousa, 2002) .
  • DNGR- 1 + DC were able to take dead cell material and were superior in this regard to monocyte-derived DC (Mo-DCs) generated with GM-CSF + IL-4
  • CBDC used for these experiments were only 50% HLA-A2 + as they were generated from HSCs purified from pooled CB, whereas Mo-DCs were from a single donor and
  • CBDC were less efficient than Mo-DC at presenting pre-processed antigenic peptides to HLA-A2- restricted T cell clones (Fig. 12). Nevertheless, CBDC were at least as efficient as Mo-DCs at activating NY-ESO-li 57- i 65 - specific T cells in response to intact recombinant NY-ESO-1 protein, a clinically relevant antigen expressed by a broad range of tumor types (Chen et al . , 2005) (Fig. 12).
  • DNGR-1 + DC were more efficient at cross-presenting the long peptide than Mo-DC DC, even though the latter were more efficient at presenting the short peptide, representing the pre-processed determinant.
  • DNGR-1 + DC have an equal or superior cross presentation ability to that of Mo-
  • NOD/SCID/ 2 microglobulin null mice and NOD/Shi-scid/lL-2RYnull (NSG) mice were bred at Charles Rivers Laboratories (Moorgate,
  • mice housed in micro-isolators and fed sterile food and acidified water.
  • Mice aged 8-12 weeks were sublethally 11000623 irradiated (3.75 Gy) up to 24 hours before i.v. injection of 50 000 Lin " human CB cells.
  • Mice were analyzed 8 to 24 weeks after reconstitution.
  • Spleen cells were prepared by digestion with liberase and DNAse, followed in some cases by an Optiprep gradient to enrich for low density cells (Sigma-Aldrich) .
  • Lin " CB cells were prepared as described above and differentiated into DC using a two-step protocol.
  • Lin " cells were cultured at 5xl0 4 cells/ml in StemSpan serum-free medium (StemCell Technologies) with penicillin, streptomycin, 100 ng/ml SCF, 100 ng/ml Flt3L, 20 ng/ml IL-3 and 20 ng/ml IL-6 (R&D Systems) . After 7-11 d of culture, the expanded cells were frozen until further use or were used directly.
  • the second step (differentiation) the second step (differentiation) ,
  • Anti-HLA-DR (L243), anti -Lineage-1 cocktail (CD3 , CD14, CD16, CD19, CD20, CD56) , anti-BDCA-3/CD141 (1A4) , anti-CD123 (7G3), anti-CDllc (B-ly6) , anti-CD80 (L307.4), anti-CD8a (RPA-T8) , anti-CD14 (M5E2) , anti-CD3 (UCHT1) , anti-CD16 (3G8), anti-CD19 011000623 (HIB19) , and anti-CD56 (B159) were from BD Pharmingen.
  • Anti- BDCA-2/CD303 AC144
  • anti -BDCA- 1/CDlc AD5-8E7
  • anti-CD83 HB15
  • anti-EpCam/CD326 HAA-125
  • anti -CCR7/CD197 FR11- 11E8
  • Anti-CDla 201B5.08 was from Dendritics.
  • Anti-CD45RO (UCHL1)
  • anti-CD103 B-Ly7
  • Dead cells were excluded by a combination of scatter gating and DAPI exclusion. Analysis was performed using FlowJo software (Treestar) .
  • FACSria cell sorting
  • FACSria primary human spleen cell suspensions, in vitro generated DC or low density cells from humanized mice were stained as above. Electronic gates were placed on live Lin " HLA-DR + cells and cells were sorted for example into BDCA2 * and BDCA3 + , or into BDCA3 + /DNGR-1 + ; or into BDCA3 hi /BDCA2 ' /BDCA1 " ,
  • Sorted DC populations were cultured at 10 s cells/ml with selected TLR agonists (Invivogen) used at pre-determined optimal concentrations. Cytokine accumulation in supernatants was measured after 16h using a Becton Dickinson Cytometric
  • Bulk CBDC were stimulated for 16h as above with varying concentrations of TLR3 or TLR7 agonists for assessment of cytokine secretion or HLA-DR upregulation by flow
  • TLR 1-9 agonists human TLR agonist 1-9, Invivogen used at pre -determined optimal concentra ions
  • IL-4 TLR 1-9 agonists
  • RNA from FACS -sorted DC subsets was extracted with an RNeasy Micro Kit and treated with DNase I, according to the
  • cDNA was synthesized from total RNA with random hexamer primers and Superscript II RT (Invitrogen) . Quantitative PCR was performed with Taqman
  • Human melanoma cells were UV irradiated (2400 J/cm 2 ), incubated for 8 h at 37°C to allow for apoptosis and secondary necrosis and labeled with CFSE (flow cytometry) or Alexa633-SE
  • confocal microscopy Dead cells were added to 5xl0 4 CBDC or Mo-DC at different ratios for 2 hours at 4°C or 37°C.
  • confocal microscopy cells were subsequently plated on fibronectin coated coverslips for 15 min, fixed in 3.7% paraformaldehyde/PBS for 10 min, permeabilized in 0.1% Triton- XIOO/PBS for 3 min, blocked with 5% mouse serum and stained for DNGR-1 using Alexa546 coupled antibody. Coverslips were mounted in Fluoromount-G and imaged with a laser scanning confocal microscope Axiovert 100M LSM 510 (Zeiss) with a 63x Plan-Apochromat NA 1.4 oil objective.
  • flow cytometric analysis cells were stained for DNGR-1 and BDCA3 and the percentage of CFSE-positive DNGR-1 * BDCA3 + cells was calculated by subtracting the frequency of positive events at 4°C
  • NY-ESO-l 1S7 -i65 peptide Choen et al . , 2000
  • NY-ESO-1 full length protein kindly provided by the Ludwig Institute of Cancer Research
  • ELAGIGILTV elanA/MART-1 short
  • KGHGHSYTTAEEAAGIGILTVILGVL elanA/MART-1 short
  • KGHGHSYTTAEEAAGIGILTVILGVL elanA/MART-1 short
  • Antigen presentation assays were carried out as previously described (Faure et al . , 2009; Salio et al . , 2001 ) using HLA-A2 -restricted NY-ESO-1- or MelanA-specific CD8 + T cells.
  • Dendritic cells acquire antigen from apoptotic cells and induce class X-restricted CTLs. Nature. 392:86-9.
  • Caminschi I., A.I. Proietto, F. Ahmet, S. Kitsoulis, J. Shin Teh, J.C. Lo, A. Rizzitelli, L. Wu, D. Vremec, S.L. van
  • the dendritic cell subtype-restricted C-type lectin Clec9A is a target for vaccine enhancement. Blood.
  • BDCA-2, BDCA- 3, and BDCA-4 three markers for distinct subsets of dendritic cells in human peripheral blood. J Immunol.
  • Nectin-like protein 2 defines a subset of T-cell zone dendritic cells and is a ligand for class-I- restricted T-cell -associated molecule. J Biol Che . 280:21955-64.
  • Interleukin (IL) -4 is a major regulatory cytokine governing bioactive IL-12 production by mouse and human dendritic cells. J Exp Med. 192:823-833.
  • CLEC9A is a novel activation C-type lectin-like receptor expressed on BDCA3 + dendritic cells and a subset of monocytes.
  • I Expression on dendritic cells and other subsets of mouse leukocytes.
  • Dendritic cells use macropinocytosis and the mannose receptor to concentrate macromolecules in the major histocompatibility complex class II compartment: downregulation by cytokines and bacterial products. J Exp Med. 182:389-400.
  • CD8 + CD205 + splenic dendritic cells are specialized to induce Foxp3 + regulatory T cells. J Immunol. 181:6923- 33.
  • Endothelial Niches for Stem Cells Cell 121(7): 1109- 1121.

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Abstract

The invention relates to methods for obtaining DNGR-1+ dendritic cells, believed to be the human equivalents of murine CD8a+ dendritic cells, by differentiation in vitro from hematopoietic stem cells (HSCs) using specific cocktails of differentiation factors. The invention also extends to generation of such dendritic cells in reconstituted mice, as well as their use in immunotherapeutic methods including antigen pulsing and adoptive transfer approaches.

Description

Methods for obtaining dendritic cells
Field of the Invention
The invention relates to methods for obtaining a human equivalent of murine CD8 + dendritic cells (DC) and the exploitation of such cells in immunotherapeutic approaches.
Background to the Invention
Mouse CD8a+ DC have attracted much attention and have been studied extensively. These cells posses several functional properties that distinguish them from other DC subtypes. These include a superior capacity to cross-present exogenous antigens on MHC class I, to ingest material from dead or dying cells and to produce IL-12 in response to innate and T cell derived stimuli (Heath and Carbone, 2009; Naik, 2008;
Villadangos and Schnorrer, 2007) . Because of these properties, CD8 + DC have emerged as an attractive cellular target for vaccination strategies, in particular those aimed at eliciting cytotoxic T cell (CTL) responses against tumour or virus- infected cells. In addition, CD8a+ DC can also induce
conversion of antigen specific T cells into regulatory T cells (Treg) , suggesting that antigen delivery to CD8a+ DC could be used to dampen immune reactivity (Yamazaki et al., 2008).
Unfortunately, the translation of mouse experiments into human studies and clinical protocols has been hampered by the fact that CD8a+ DC have not been identified in humans.
DNGR-1 is a C-type lectin which has recently been identified as a novel marker for mouse CD8 + DC (Caminschi et al . , 2008;
Sancho et al . , 2008; WO2009/013484 ) and also of an apparently equivalent subset of dendritic cells in humans. Jongbloed et al. (J. Exp. Med. 2020, 207(6): 1247-60), published after the priority date of this application, has recently confirmed that human DNGR-1+ DCs are functionally similar to murine CD8 + DC. There remains a need for reliable and reproducible methods for isolation and/or generation of such cells in order to
facilitate their further study and use. Summary of the Invention
The present inventors have identified DC which express DNGR-1 (DNGR-1 DC) in human secondary lymphoid tissues, specifically in primary human spleen. However, only a low yield of such cells could be obtained, due to restricted access to tissue, paucity of DC in samples, and difficulty in recovering live cells from frozen samples.
Consequently, the inventors have developed protocols for obtaining DNGR- 1+ DC from hematopoietic stem cells (HSCs) . The ability to generate these cells in reconstituted mice, or to grow them in vitro, offers tremendous opportunities for studying their properties and for using them in
immunotherapeutic methods including antigen pulsing and adoptive transfer approaches.
Thus, in a first aspect, the invention provides a method of obtaining a dendritic cell population comprising one or more DNGR-14 DC, the method comprising the step of contacting a HSC with a differentiation cocktail ex vivo or in vitro, wherein the differentiation cocktail contains a) GM-CSF (granulocyte- macrophage colony stimulating factor) , IL.-4 (Interleukin-4) , and Flt3L (Fms-related tyrosine kinase 3 ligand) ; or b) GM- CSF, IL-4 and TGF-β (Transforming growth factor β) . It may also be desirable to contact the HSC with one or more stem cell viability factors. Stem cell viability factors are useful to maintain stem cell viability. For example HSCs may be co- cultured with stromal elements supportive of HSC survival or cultured in media conditioned by being previously inoculated onto stromal feeder layers which secrete factors and proteins conducive to the maintenance and survival of HSCs. A specific example of such a factor is stem cell factor (SCF) although others may be contemplated such as
Thrombopoie in (TPO) , Pleiotrophin, HoxB4, HoxA9 , Wnt3a, Notchl and Jagged-1. Factors such as Thrombopoietin,
Pleiotrophin, HoxB4 , HoxA9, Wnt3a, Notchl and Jagged-1 may be used alone, or in combination. These factors may be used alone or in combination with one another. For example, any one or more of TPO, Pleiotrophin, HoxB4 , HoxA , Wnt3a, Notchl and Jagged-1 may be used in combination with SCF. It may be desirable to replenish or renew the differentiation cocktail periodically. Thus the differentiation cocktail may be replenished during the contacting step. The differentiation cocktail will typically be replenished once, but may be replenished twice, three times, four times or more if desired e.g every 5, 6, 7 or 8 days. The HSCs may be contacted with the differentiation cocktail for as long as required for emergence of DNGR- 1+ DC. Typically they will be contacted with the differentiation cocktail for at least 6 days, e.g. at least 7, at least 8, at least 9, at least 10 days, or at least 21 days; e.g. up to 10 days, up to 11 days, up to 12 days, up to 13 days, up to 14 days, up to 15 days, up to 16 days, up to 17 days, up to 18 days, up to 19 days, or up to 21 days.
HSCs for use in the claimed method may be obtained from any suitable source. Sources include but are not limited to embryonic yolk sac, the embryonic aorta-gonad-mesonephrous region, fetal liver or spleen, adult spleen, adult bone marrow, fetal bone marrow, peripheral blood and umbilical cord blood. Thus the method may comprise the preliminary step of providing a sample containing HSCs. The HSCs may be from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as a rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat. In certain embodiments, the HSCs are human. In certain embodiments, the HSCS are derived from a human donor. The sample may be contacted directly with the differentiation cocktail. However, it may be desirable to enrich the sample for HSCs and/or expand the HSCs in the sample before such a contacting step. This may involve a positive selection for cells expressing markers associated with HSCs. Additionally or alternatively enrichment for HSCs may involve negative selection to remove cells which are not HSCs. HSCs typically do not display lineage specific markers. Thus it may be desirable to deplete the sample of cells expressing lineage specific markers (so-called "lineage positive cells") . Such enrichment or depletion may be performed in addition to, or as an alternative to, an expansion step as described below.
It may be desirable to induce proliferation of a HSC, or population of HSCs, prior to contacting the HSCs with the differentiation cocktail. This allows the number of precursor cells to be increased before differentiation begins, thus increasing the final yield of DNGR-1+ DC. Thus the method may additionally comprise providing a first cell population comprising one or more HSCs, and expanding the number of HSCs in the first cell population, prior to contacting the cell population with the differentiation cocktail. The expansion step may comprise, for example, contacting said first cell population with one, more than one, or all of SCF, Flt3L, IL-3 (Interleukin-3 ) and IL-6 (Interleukin-6) . Other factors such as Thrombopoietin, Pleiotrophin, HoxB4 , HoxA9, Wnt3a, Notchl and Jagged- 1 may be used alone or in combination, particularly in combination with SCF.
In certain embodiments it may be desirable to deplete the sample of cells expressing lineage specific markers in orde to obtain an enriched HSC population, and subsequently to expand the number of HSCs in the sample .
It will be understood that the dendritic cell population obtained by contacting HSCs with the differentiation cocktail may additionally include other cell types, including dendriti cells that do not express DNGR-1, such as cells which express one or more of BDCA2 , IRF4, TLR7 and TLR9. Such cells may be plasmacytoid dendritic cells (pDC) .
The invention also relates to methods of obtaining DNGR- 1+ DC from rodents having xenogeneic immune cells (i.e. immune cells from another species) . The rodent is typically
immunocompromised, i.e. it does not have a functional immune system of its own and thus is not capable of mounting an immune response against a graft of immunologically different (allogeneic or xenogeneic) cells or tissue. Thus the invention provides a method of obtaining a dendritic cell population comprising one or more DNGR-1+ DC, the method comprising a) obtaining cells from the lymphoid tissue of a rodent
reconstituted with xenogeneic immune cells; and b) isolating DNGR-1* DC. The method may further comprise the step of reconstituting the rodent. Thus the method of the invention may further comprise a) providing an immunocompromised rodent; and b) introducing xenogeneic immune cells into said rodent. The rodent may thus be reconstituted with xenogeneic immune cells which may be obtained from HSCs. The step of isolating DNGR- 1+ DC may additionally comprise positive selection for cells expressing BDCA3 and/or HLA-DR.
The rodent may be a mouse, for example, a NOD/SCID mouse, particular a NOD/SCID/^2m null mouse or a NOD/SCID/yc nul mouse .
The xenogeneic HSCs may be derived from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as another species of rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat. In certain embodiments, the HSCs are human HSCs.
The lymphoid tissue may be taken from any suitable lymphoid organ but will often be derived from the spleen. Whichever of the above-described methods is used to provide the DC population, a DC population is obtained which comprises one or more DNGR- l+ DC.
In a further aspect it may be desirable to further isolate or purify one or more DNGR-1+ DC. Therefore the method may additionally comprise the step of isolating a DNGR- 1* DC, or a population thereof.
A DNGR- 1+ DC, or population thereof, may be isolated by contacting the cells with a binding agent capable of binding to DNGR- 1. Antibodies directed against (e.g. specific for) DNGR-1, and functional fragments of such antibodies having an antibody binding site, are particularly suitable for use as binding agents.
If desired, the binding agent or antibody may be provided on a solid support (such as a particle or bead, e.g. a magnetic bead) to facilitate isolation of the desired cells.
Alternatively, the step of isolating DNGR-1* DC may be performed using cell sorting techniques such as flow
cytometry, e.g. FACs.
It is believed that most or all human DNGR-1* DC also express BDCA3 and HLA-DR. Thus the method may additionally comprise positive selection for cells expressing BDCA3 (BDCA3* DC) and/or HLA-DR, e.g. using a binding agent (such as an antibody or antibody fragment) having the ability to bind to BDCA3 or
HLA-DR.
The invention provides a dendritic cell population comprising one or more DNGR-1* DC as obtainable by any one of the methods of the invention as described above. 000623 Having been isolated to the desired level of purity, the DNGR- 1+ DC isolated by the methods described above may find
application in various ways.
For example, the cells may be administered directly to a subject, or formulated for administration to a subject
directly. Thus the invention provides a dendritic cell population as obtained or obtainable by any of the methods of the invention as described above, for use in a method of medical treatment. The invention further provides a dendritic cell population as obtained or obtainable by any of the methods of the invention, for use in the treatment of any suitable condition as described in more detail below. The invention further provides the use of a dendritic cell
population as obtained or obtainable by any of the methods of the invention, in the preparation of a medicament for the treatment of any suitable condition as described in more detail below. It may be desirable to expose the DNGR- 1+ DC to an antigen in order to enable that antigen to be presented to T cells. This approach is sometimes described as "antigen pulsing" . It may be desirable that the antigen is thus cross -presented to T cells via MHC class I molecules.
Thus the invention further provides a method comprising contacting the DC population obtained or obtainable by the methods described above in vitro or ex vivo with an antigen. The DC population may also be contacted with an adjuvant.
Contacting may take place in vitro, for example at or
approximately at the same time as contacting with the antigen, or at or after administration to the recipient subject. The nature of the adjuvant may be selected depending on the nature of the desired immune response. The antigen-pulsed DC population may then be administered to a subject, or formulated for administration to a subject. The subject may be the same individual from whom the HSCs were originally derived.
Thus the invention provides an antigen-pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention as described above, for use in a method of medical treatment. The invention further provides an antigen- pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention, for use in the treatment of any suitable condition as described in more detail below. The invention further provides the use of an antigen-pulsed dendritic cell population as obtained or obtainable by any of the methods of the invention, in the preparation of a
medicament for the treatment of any suitable condition as described in more detail below.
The antigen-pulsed DC population may further be contacted with T cells in vitro or ex vivo in order to generate or stimulate T cells (particularly CTLs, but also helper T cells or Tregs) specific for the antigen. The T cells in the population may be allowed to expand in culture in order to increase the number or proportion of T cells in the population which are specific for the antigen. The T cells may then be administered to a subject or formulated for such administration. Optionally the T cells are separated from other cells in the population before administration. As in other aspects of the invention, the dendritic cells and T cells may also be contacted with an adjuvant. The nature of the adjuvant may be selected
depending on the nature of the desired immune response.
Preferably, the T cells and dendritic cells are autologous, i.e. they are derived from the same subject, or from
genetically identical subjects. The T cells may be re-administered to the subject from whom they (or their progenitors) were derived.
Again, an adjuvant may be administered with the T cells.
Thus the invention provides a population of T cells as obtained or obtainable by the above methods, for use in a method of medical treatment. The invention further provides such a population of T cells, for use in the treatment of any suitable condition as described in more detail below. The invention further provides the use of such a population of T cells in the preparation of a medicament for the treatment of any suitable condition as described in more detail below.
Description of the Drawings
Figure 1. DNGR-1+ BDCA3+ DC are found in spleen of humans
(A) Flow cytometry analysis of human spleen cell suspensions from cadaveric donors. Live HLA-DR+ Lin" cells were gated as shown (upper left panel) and analyzed for expression of BDCA3 versus DNGR-1 (upper right panel) . Three populations were defined (gate I: BDCA3hi, DNGR- 1+ ; gate II: BDCA3int, DNGR-1"; gate III: BDCA3" , DNGR-1") and analyzed for the expression of CDllc versus BDCA1, BDCA2 or CDllb (lower panels) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. Arrows show gating strategy. (B) Normalized
expression of DNGR-1, Necl2 and IRF8 mRNA on sorted HLA-DR* Lin" BDCA2" BDCA1" DCs, from human spleen, expressing high (BDCA3hi) , intermediate (BDCA3int) , or low levels of BDCA3
(BDCA3~ ) . ND, not detectable. Data in A and B are
representative of at least 3 cadaveric donors. Additional data analysis is shown in Fig. 9 . Figure 2. DNGR-1+ BDCA3 DC are found in the spleens of humanized mice HLA-DR+ Lin" live spleen cells from humanized mice were analyzed as in Figure 1 for the expression of BDCA3 versus BDCA2 (upper right) , BDCA3 versus DNGR-1 (middle left) , and BDCA2 versus DNGR-1 (middle right) . The scatter profile of BDCA3+ and BDCA2+ cells is also shown (lower panels) . Numbers indicate
percentage of cells in each of the indicated gates or
quadrants. Data are representative of multiple mice from 3 independent cohorts of mice engrafted with human HSCs . Figure 3. Phenotype of in vitro generated DNGR1+ BDCA3+ DCs
CBDCs were generated as described in the methods. Live cells were analyzed for the expression of BDCA3 versus DNGR-1 (A) , CDla versus DNGR-1 (B, left panel) and CDla versus HLA-DR (B, middle panel) . Gated CDla+ HLA-DR+ cells were analyzed for the expression of BDCA3 versus DNGR-1 (B, right panel) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. (C) CBDCs were treated with or without poly I:C (10 μg/ml) overnight and subsequently sorted into live HLA-DR+ Lin~ DNGR- 1+ cells. Cytospins were prepared and morphology assessed by hematoxilin-eosin staining. Bars: 5 μτη. (D) Live DNGR- 1+ DC were analyzed for the expression (red) of CDllc, BDCA1, CD8 , BDCA2 , CD83, CD86, CD40, CD103, CD45RO, CD123 , CCR7 , EpCam and CDllb. Isotype-matched control mAb staining is shown in the blue histograms. Data in A-D are representative of multiple CBDC cultures with 2 independent pools of cord blood derived
HSCs.
Figure 4. DNGR-1+ BDCA3+ DCs display a gene expression profile characteristic of mouse CD8a+ DCs
Normalized expression of DNGR-1, Necl2, CD207, BATF3 , 1RF8,
IRF4, TLR7 , TLR9, DAP12, TLR8 and TLR3 mRNA in BDCA3+ DNGR-1+ DCs (DNGR- 1+) purified either from CBDCs or from pooled spleens of 2 to 5 humanized mice (hu mice) . Expression was compared to that of BDCA2+ pDCs purified from the same humanized mouse spleens. Data are representative of 2 independent experiments.
ND, not detectable. Figure 5. DNGR-1+ BDCA3+ DCs respond to TLR3 and TLR8 but not TLR7 agonists
(A) Purified BDCA3+ DNGR- 1+ DCs from CBDCs (DNGR-1+ CBDCs) or from humanized mice (DNGR-1+ hu mice) , or BDCA2+ pDCs from the same humanized mice (BDCA2+ hu mice) , were cultured with poly I:C (10pg/ml) , imiquimod (lC^g/ml) or medium alone. After overnight incubation, culture supernatant was tested for TNP- and IL-6 content.
(B) DNGR- 1+ CBDCs as in (A) were cultured with resiquimod (lOpg/ml) , poly U (10pg/ml) or medium alone. Supernatant was tested for IL-6 after overnight culture. (C) 5xl03 DNGR- 1+ BDCA3* DCs purified from CBDCs (DNGR-1* CBDCs) or human spleen (DNGR-1+ hu spleen) were cultured with a mix of TLR agonists and cytokines with or without T cells and antigen, as described in the methods. Supernatant was tested for IL-12p70 after overnight culture. Data are representative of at least 2 independent experiments with independent sources of cells. ND, not detectable . Figure 6. DNGR-1+ BDCA3+ DCs efficiently capture dead-cells and cross-present exogenous antigens
(A) CBDCs or Mo-DCs were incubated with labelled dead melanoma cells at the indicated ratios, as described in the methods. Uptake of dead cell material by DNGR- 1+ DCs or Mo-DC was quantified by flow cytometry (left) and confirmed by confocal microscopy (right; blue shows dead cell material; bar: 5 μτη) . Data are mean ± SEM of three biological replicates from one experiment and are representative of two independent
experiments .
(B) 104 purified BDCA3+ DNGR- 1+ CBDCs or Mo-DC, as indicated, were pulsed for 2-3 h with 1 μΜ Me1anA/MART- 1 long peptide as antigen source for cross-presentation or the same
concentration of short peptide as a processing- independent control, in the presence or absence of poly I:C. Cells were subsequently washed twice and co- cultured with a MelanA- specific CD8+ T cell clone at a 5:1 cell ratio. IFN-γ
accumulation in culture supernatants was assessed after 40 h. Data are the mean value of duplicate wells ± range and are representative of 2 independent experiments.
Figure 7. Determination of the appropriate differentiation cocktails
A number of factors were tested in different combinations for the ability to generate DNGR- 1+ DC from HSCs . Twenty
combinations were tested and 2 were found suitable as
indicated (V) . DNGR- 1+ BDCA3+ DC could be obtained after culture with SCF, Flt3L, GM-CSF and IL-4. DNGR- 1+ BDCA3+ DC could also be obtained by substituting Flt3L for TGF-β.
Cultures containing TNF did not produce DNGR-1+ DC.
Figure 8. In vitro generation of DNGR-1+ DC with the GM-CSF, IL-4, TGF-β differentiation cocktail
CBDCs were generated as described in the methods. Live cells were analyzed for the expression of BDCA3 versus DNGR-1 at day 6 of culture. Numbers indicate percentage of cells in each of the specified gates. Data shown are representative of multiple CBDC cultures with 2 independent pools of cord blood derived
HSCs.
Figure 9. Flow cytometry analysis of human spleen cell suspensions from cadaveric donors
Live HLA-DR+ Lin" cells (same as in Fig. 1) were analyzed for expression of CDllc versus DNGR-1 (upper panel) . Three populations were identified (gate I: CDllc+, DNGR-1+; gate II: CDllc\ DNGR-1"; gate III: CDllc", DNGR-1") and analyzed subsequently for the expression of BDCA3 versus BDCAl, BDCA2 , or CDllb (lower panels) . Numbers indicate percentage of cells in each of the indicated gates or quadrants. Data are
representative of 3 cadaveric donors.
Figure 10. DNGR-1* BDCA3+ CBDCs do not express CD14 and do not develop in the absence of SCF, GM-CSF, Flt3L or IL-4
(A) The requirement for each growth factor in the CBDC differentiation cocktail was assessed by culturing amplified 11000623 cord blood HSCs with differentiation cocktails lacking SCF (GM-CSF, Flt3L, and IL-4 (no SCF)) ; GM-CSF (SCF, Flt3L, and IL-4 (no GM-CSF) ) ; IL-4 (SCF, GM-CSF, and Flt3L (no IL-4)); or Flt3L (SCF, GM-CSF, IL-4 (no Flt3L) ) . After 13 days, live cells were analyzed for the expression of BDCA3 versus DNGR-1.
Numbers indicate percentage of cells in each of the indicated gates or quadrants.
(B) Live HLA-DR+ Lin" (CD3/CD16/CD19/CD20/CD56 ) DNGR- 1+ BDCA3+ DC (DNGR- 1+) (left) were compared to DNGR-1" BDCA3" (DNGR-1")
(right) in the same CBDC culture for the expression of CD14 (red histograms) . Isotype -matched control staining is shown by the blue histograms. Data in A and B are representative of multiple CBDC cultures with 2 independent pools of cord blood derived HSCs.
Figure 11. Poly I:C stimulates production of cytokines by CBDCs and upregulation of HLA-DR in DNGR-1+ BDCA3+
Bulk CBDCs were cultured with poly I:C (l(^g/ml) , imiquimod (lOpg/ml) or medium alone. After overnight incubation, culture supernatant was tested for TNF- content (left) or the cells were recovered and live DNGR-l* BDCA3+ DC tested for expression of HLA-DR (right; mean fluorescence intensity of HLA-DR staining) . Data are representative of 2 independent
experiments.
Figure 12. CBDCs efficiently cross-present exogenous antigens
104 bulk CBDCs or Mo-DCs were pulsed for 2-3 h with ΙΟμΜ NY- ESO-1 protein (left) or ΙμΜ pre-processed peptide (right) in the presence or absence of poly I:C before co-culture with an
NY-ESO-11 157,165 -specific T cell clone at a 5:1 T:DC ratio. Fixed DC were used as a control to exclude extracellular antigen processing. IFN-γ accumulation in culture supernatants was assessed after 40 h of T/DC co-culture. Data are
representative of 2 independent experiments. ND, not
detectable. Detailed Description of the Invention
DNGR-1+ dendritic cells
Dendritic cell, NK lectin group receptor 1 (DNGR-1) (also known as Clec9a - see for example WO2009/013484 ) is a C-type lectin expressed on certain dendritic cells.
These cells are capable of cross-presenting extracellular antigen via MHC class I molecules. By "extracellular" is meant that the antigen has been taken up by the cell from its extracellular environment, typically by endocytosis or phagocytosis .
As used in this specification, the term DNGR-1 is intended to embrace the human protein, the murine protein, their
homologues (especially orthologues) in other species, and variants and derivatives thereof which retain DNGR-1 activity. Such variants and derivatives preferably have at least about 30% sequence identity, more preferably at least about 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95% sequence identity to the human protein sequence shown below, or at least about 35% identity, more preferably at least about 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95% identity to the extracellular domain (CTLD) of the human protein sequence shown below.
Human DNGR-1 cDNA sequence:
ATGCACGAGGAAGAAATATACACCTCTCTTCAGTGGGATAGCCCAGCACCAGACACTTACCA GAAATGTCTGTCTTCCAACAAATGTTCAGGAGCATGCTGTCTTGTGATGGTGATTTCATGTG TTTTCTGCATGGGATTATTAACAGCATCCATTTTCTTGGGCGTCAAGTTGTTGCAGGTGTCC ACCATTGCGATGCAGCAGCAAGAAAAACTCATCCAACAAGAGAGGGCACTGCTAAACTTTAC AGAATGGAAGAGAAGCTGTGCCCTTCAGATGAAATATTGCCAAGCCTTCATGCAAAACTCAT TAAGTTCAGCCCATAACAGCAGTCCTTGTCCAAACAATTGGATTCAGAACAGAGAAAGTTGT TACTATGTCTCTGAAATTTGGAGCATTTGGCACACCAGTCAAGAGAATTGTTTAAAGGAAGG TTCCACGCTGCTACAAATAGAGAGCAAAGAAGAAATGGATTTTATCACTGGCAGCTTGAGGA AGATTAAAGGAAGCTATGATTACTGGGTGGGGTTGTCTCAGGATGGACACAGCGGACGCTGG CTTTGGCAAGATGGCTCCTCTCCTTCTCCTGGCCTGTTGCCAGCAGAGAGATCCCAGTCAGC TAACCAAGTCTGTGGATACGTGAAAAGCAATTCCCTTCTTTCGTCTAACTGCAGCACGTGGA AGTATTTTATCTGTGAGAAGTATGCGTTGAGATCCTCTGTCTGA
Human DNGR-1 protein sequence:
MHEEEIYTSLQWDSPAPDTYQKCLSSNKCSGACCLWW-JSCVFCMGLLrASIFLGVKLLQVS TIAMQQQEKLIQQERALLNFTE KRSCALQMKYCQAFMQNSLSSAHNSSPCP NWIQNRESC YYVSEIWSI HTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYDYWVGLSQDGHSGRW L QDGSSPSPGLLPAERSQSANQVCGYVKSNSLLSSNCSTWKYFICEKYALRSSV
(The transmembrane portion is shown in italics and the CTLD is underlined.)
Murine DNGR-1 cDNA sequence:
ATGCATGCGGAAGAAATATATACCTCTCTTCAGTGGGACATTCCTACCTCAGAGGCCTCTCA GAAGTGCCAATCCCCTAGCAAATGTTCAGGAGCATGGTGTGTTGTGACGATGATTTCCTGTG TGGTCTGTATGGGCTTGTTAGCAACGTCCATTTTCTTGGGCATCAAGTTCTTCCAGGTATCC TCTCTTGTCTTGGAGCAGCAGGAAAGACTCATCCAACAGGACACAGCATTGGTGAACCTTAC ACAGTGGCAGAGGAAATACACACTGGAATACTGCCAAGCCTTACTGCAGAGATCTCTCCATT CAGGCACAGATGCTTCTACTGGACCAGTTCTTCTGACCTCTCCACAGATGGTTCCACAGACC CTGGACAGCAAGGAAACAGGTAGTGACTGCAGCCCTTGTCCACACAACTGGATTCAGAATGG AAAAAGTTGTTACTATGTCTTTGAACGCTGGGAAATGTGGAACATCAGTAAGAAGAGCTGTT TAAAAGAGGGCGCTAGTCTCTTTCAAATAGACAGCAAAGAAGAAATGGAGTTCATCAGCAGT ATAGGGAAACTCAAAGGAGGAAATAAATATTGGGTGGGAGTGTTTCAAGATGGAATCAGTGG ATCTTGGTTCTGGGAAGATGGCTCTTCTCCTCTCTCTGACTTGTTGCCTGCAGAAAGACAGC GATCAGCCGGCCAGATCTGTGGATACCTCAAAGATTCTACTCTCATCTCAGATAAGTGCGAT AGCTGGAAATATTTTATCTGTGAGAAGAAGGCAGTTTGGATCCTGCATCTGA
Murine DNGR-1 protein sequence:
MHAEEIYTSLQWDIPTSEASQKCQSPSKCSGAWCWrMISCWC GLiArSIFLGlKFFQVS SLVLEQQERLIQQDTALVNLTQ QR YTLEYCQALLQRSLHSGTDASTGPVLLTSPQMVPQT LDSKETGSDCSPCPHN IQNGKSCYYVFERWEMWNISKKSCLKEGASLFQIDSKEEMEFISS IGKLKGGNKYWVGVFQDGISGSWFWEDGSSPLSDLLPAERQRSAGQICGYLKDSTLISDKCD SWKYFICEKKAFGSCI
(The transmembrane portion is shown in italics and the CTLD is underlined. )
DNGR-1 is highly restricted to BDCA3+ DC among peripheral blood mononuclear cells (Caminschi et al . , 2008; Huysamen et al . , 2008; Sancho et al . , 2008). BDCA3 is one of a group of markers known as Blood DC Antigens (BDCA) which enable distinct DC subsets to be phenotypically identified in human blood (Dzionek et al . , 2000) . BDCA3 marks a small subset of DC that appear myeloid in origin (Dzionek et al . , 2000;
MacDonald et al . , 2002) . By contrast, BDCA2 appears to be a marker for circulating human pDC and is not believed to be expressed on DNGR- 1+ DC. DNGR-1* DC also express HLA-DR, which is a general marker for antigen presenting cells, and it is believed that DNGR-1+ BDCA- 3+ HLA-DR* cells are a distinct phenotypic population of cells in humans. Furthermore, DNGR- 1* DC express Necl2 and do not express CD14 or CDllb distinguishing these cells from other DC subsets.
Murine CD8a+ DC express TLR9, CD103 and CD8 but it appears that human DNGR- 1 cells do not express TLR9 , CD103 or CD8 , or express them only at very low levels.
The dendritic cell population obtained by the methods of the invention may additionally include dendritic cells that do not express DNGR-1, such as cells which express one or more of BDCA2, IRF4, TLR7 and TLR9. Such cells may be plasmacytoid dendritic cells (pDC) . BDCA2+ pDC respond to imiquimod but not poly I:C, while DNGR- 1+ DC respond to poly I:C but not
imiquimod. Thus, DNGR- 1+ BDCA3+ DC and pDC have reciprocal patterns of response to TLR7 vs. TLR3 agonists, which could be exploited in vaccination strategies designed to mobilize one and/or the other cell type in the DC population.
Hematopoietic stem cells (HSCs)
Hematopoietic stem cells (HSCs) are multipotent stem cells that are capable of giving rise to all blood cell types including myeloid (monocytes and macrophages, neutrophils, basophils, eosinophils, erythrocytes,
megakaryocytes/platelets , dendritic cells) , and lymphoid lineages (T-cells, B-cells, NK-cells) . As stem cells they also have the capacity to self-renew. Cell types referred to as hematopoietic precursor cells (HPCs) , hematopoietic progenitor cells (HPCs) , or hematopoietic multipotent progenitor cells (MPPs) also have this activity and are included within the term "HSC" as used herein.
HSCs are characterized by the ability to regenerate a
multilineage hematopoietic system when introduced into an immunodeficient host. A multilineage hematopoietic system will contain all blood cells and their progenitors. HSCs
introduced in such circumstances will be able to sustain multilineage hematopoiesis long term (for example, for the lifespan of the animal model) or transiently (for example, for 4 months or less) .
The positive expression or negative expression (expression profile) of certain cell surface proteins may be used to identify HSCs with the potential to differentiate into DNGR- 1+ DC.
For example, HSCs are lineage negative (Lin") i.e they do not express lineage- specific markers such as CD3 , CD14, CD16, CD19, CD20 and CD56. They may also not express CD38, or only at low levels (CD38_ 1°- ) . They typically express CD34+.
The expression profile of other cell surface proteins suitable for identifying HSCs will be known to one skilled in the art. HSCs obtained from any source are suitable for use in the current method. Sources of HSCs include any tissue which contains any amount of HSCs. These tissues may include but are not limited to embryonic yolk sac, the embryonic aorta-gonad- mesonephrous region, fetal liver or spleen, adult spleen, adult and fetal bone marrow, untreated peripheral blood and umbilical cord blood. HSCs can also be mobilised into the peripheral blood and spleen tissue from the bone marrow by B2011/000623 cytokine treatment, e.g. with G-CSF (granulocyte-macrophage colony stimulating factor) or GM-CSF, and optionally
eyelophosamide . The HSCs may be from any desired mammalian species, e.g. human, other primate, or domestic, laboratory or livestock animals, such as a rodent (e.g. mouse, rat or guinea pig), lagomorph (e.g. rabbit), cat, dog, pig, cow, horse, sheep or goat. In certain embodiments, the HSCs are human. In certain embodiments, the HSCS are derived from human donors. It may be desirable to enrich a sample for HSCs. HSCs suitable for use in the methods of the invention may be purified from a sample by any suitable technique or device. Positive or negative selection may be employed to enrich for, or deplete of, respectively cells expressing certain surface proteins associated with particular cell lineages or stages of
differentiation.
Since HSCs are lineage negative, a sample of cells can be enriched for HSCs by negative selection for cells expressing one or more lineage specific markers (CD3, CD14, CD16, CD19,
CD20 and CD56) .
Once a population of cells containing HSCs has been obtained, the HSCs in this population may be expanded. The expansion step may occur before or after the cell population is enriched for HSCs. The expansion step may comprise, for example, culturing in hematopoietic bioreactors (see Cabrita et al . , 2003), or co-culturing with stromal elements supportive of HSC expansion/survival , or culturing in media conditioned by being previously inoculated onto stromal feeder layers which secrete factors and proteins conducive to the maintenance, survival and expansion of HSCs. The expansion step may comprise
contacting said first cell population with one or more of SCF, Flt3L, IL-3 and IL-6, for example, contacting said first cell population with one or more of SCF, Flt3L, IL-3 and IL-6.
Differentiation cocktail The term "differentiation cocktail" is used in this
specification to refer to the combination of cytokines and/or growth factors which are used to differentiate HSCs into DNGR- V DC. Two such combinations of factors have been identified, namely (a) GM-CSP, IL-4 and Flt3, and (b) GM-CSF, IL-4 and
TGF-β.
The differentiation cocktail is contacted with HSCs in vitro or ex vivo, but typically under cell culture conditions. It will be appreciated that the culture medium may contain additional factors which have roles other than promoting differentiation of HSCs to DNGR-1+ DC. These components are not regarded as part of the differentiation cocktail. For example, the culture medium may contain conventional cell culture components such as antibiotics (e.g. penicillin, streptomycin), nutrients (e.g. glutamine) , heat-inactivated fetal calf serum or similar, etc.
The culture medium may also contain components for maintenance of stem cell properties such as viability and/or potency;
these stem cell viability factors are described above and can be used individually or combinations as described. For example, SCF may be included in the culture medium but it does not constitute part of the differentiation cocktail. SCF may be provided in a concentration of about 15-25 ng/ml, for example about 20 ng/ml.
However, other cytokines and growth factors besides those present in the relevant differentiation cocktail should not be included, or should not be included at biologically active levels, in the culture medium. For example, G-CSF and TNF- should not be included at all, TGF-β should not be present in the culture medium when differentiation cocktail (a) is used, and Flt3 should not be present in the culture medium when differentiation cocktail (b) is used. Of course, this does not prevent the use of certain such factors at later stages of the methods described herein once adequate differentiation of HSCs to DNGR- 1+ DC has taken place. For example, TNFa can be used as an adjuvant at the antigen pulsing stage or at the stage of antigen presentation by a
DNGR- 1* DC to T cells, and can influence the resulting T cell response .
The HSCs may remain in contact with the differentiation cocktail for at least 6 days, e.g. at least 7, at least 8, at least 9 or at least 10 days. The contact may be maintained until sufficient differentiation has taken place. Typically contact will be maintained for up to 14 days, e.g. up to 10 days, up to 11 days, up to 12 days or up to 13 days. However it will be understood that longer exposure times may be employed if required, for example, up to 21 days or longer.
Preferably GM-CSF is provided at a concentration of about 15- 25 ng/ml, for example at about 20 ng/ml . Preferably IL-4 is provided at a concentration of about 15-25 ng/ml, for example at about 20 ng/ml. Preferably Flt3L is provided at a
concentration of about 80-120 ng/ml, for example at about 100 ng/ml. Preferably TGF-β is provided at a concentration of about 8-12 ng/ml, for example at about 10 ng/ml.
In a preferred embodiment the differentiation cocktail
comprises about 20 ng/ml GM-CSF, about 20 ng/ml IL-4, and about 100 ng/ml Flt3L. In an alternative, preferred embodiment the differentiation cocktail comprises about 20 ng/ml GM-CSF, about 20 ng/ml IL-4, and about 10 ng/ml TGF-β. The term
"about" implies +/- 5% in this context.
Immunocompromised rodent
An immunocompromised rodent suitable for use in the methods < the present invention has a deficient immune system enabling it to accept xenografts. Preferably an immunocompromised rodent will not produce functional B and T lymphocytes or antibodies. The immunocompromised rodent will preferably show defects in N cell activity and defects in innate immune effects. In a preferred embodiment the immunocompromised rodent may be reconstituted with tissue from another species without eliciting an immune response in said immunocompromised rodent. In a further embodiment the immunocompromised rodent may be reconstituted with stem cells from another species, without eliciting an immune response in said immunocompromised rodent .
Examples of a suitable immunocompromised rodent include the SCID mouse; SCID beige mouse; NOD/SCID mouse; NOD/SCID/ 2m null mouse or NOD/SCID/yc null mouse.
The immunocompromised rodent may be sublethally irradiated. The dose of radiation to be administered will depend on the size of the rodent and its susceptibility to radiation, but should be sufficient to deplete the rodent's immune cells without killing the rodent.
Immunocompromised rodents may then be reconstituted with HSCs. HSCs may be introduced by intraperitoneal or intrahepatic injections. HSCs may be injected directly into stem cell niches, such as bone marrow, or into the uterus. Placing HSCs in suitable haematopoietic microenvironments , such as newborn liver or bone marrow, may help progenitors to survive and engraft. Preferably HSCs are injected intravenously. HSCs may be obtained from the sources mentioned previously. Immune response
The cell population comprising DNGR-1+ DC may play a role in induction of various types of immune response, for example, those involving CD8 T cells or Treg cells. They may be particularly involved in immune responses caused by
immunogenic cell death, by taking up cellular debris from the dead or dying cells (or even absorbing the entire cell) and presenting processed fragments to T cells. In vitro, or following administration to a subject, DNGR-1+ DC can induce an immune response to a target antigen with which they have been contacted. The immune response stimulated may be a Thl, Th2 , Thl7 or Treg response. The immune response may be the proliferation of T cells, which may be CTL or helper T cells. The immune response can be the proliferation of both CD8+ T cells and CD4+ T cells, and may involve the
proliferation of both types of T cell in any given immune response. The cell population comprising DNGR- 1+ DC may also stimulate and induce proliferation of Treg cells. Treg cells are characterised by the expression of Foxp3. Most Treg cells are CD4+ and CD25+, and can be regarded as a subset of helper T cells, although a small population may be CD8+. However, given that Treg cells may be capable of modulating the response of other cells of the immune system against an antigen in other ways, e.g. inhibiting or suppressing their activity, the effect on the immune system as a whole may be to modulate (e.g. suppress or inhibit) the response against that antigen. Thus an immune response can also comprise modulating the response to an antigen (e.g. inhibiting or suppressing) .
It may be particularly desirable to raise a Treg response against an antigen to which a subject exhibits, or is at risk of developing, an undesirable immune response. For example, it may be a self antigen against which an immune response occurs in an autoimmune disease. Examples of
autoimmune diseases in which specific antigens have been identified as potentially pathogenically significant include multiple sclerosis (myelin basic protein) , insulin-dependent diabetes mellitus (glutamic acid decarboxylase) , insulin- resistant diabetes mellitus (insulin receptor) , coeliac disease (gliadin) , bullous pemphigoid (collagen type XVII) , auto- immune haemolytic anaemia (Rh protein) , auto- immune thrombocytopenia (GpIIb/lIIa) , myaesthenia gravis
(acetylcholine receptor) , Graves' disease (thyroid- stimulating hormone receptor), glomerulonephritis, such as Goodpasture's disease (alpha3 (IV) CI collagen), and pernicious anaemia (intrinsic factor) . Alternatively the desired immune response may be against an extracellular antigen which stimulates a response which also causes damage to host tissues. For example, acute rheumatic fever is caused by an antibody response to a Streptococcal antigen which cross -reacts with a cardiac muscle cell antigen.
Depletion of Treg cells or impairment of Treg cell function has been shown to result in autoimmune disease in murine models. Disease caused in test animals include arthritis (e.g. rheumatoid arthritis), inflammatory bowel disease, gastritis, pernicious anaemia, thyroiditis, insulitis, diabetes, sialoadenitis, adrenalitis, autoimmune
orchitis/oophoritis, glomerulonephritis, chronic obstructive pulmonary disease and experimental autoimmune encephalitis and multiple sclerosis. Induction of a regulatory T cell type 1 response has also been shown to reduce the development of atherosclerosis in murine models ( allat Z. et al . Circulation 108:1232-7, 2003) . Treg activity has also been shown to be significant in the rate at which allografts are rejected.
Depletion of Treg cells or impairment of function accelerates the rate of rejection, while infusion of test animals with syngeneic lymphocytes enriched in Treg cells has been shown to prolong graft survival. The methods of the present invention may therefore find use in the treatment of any of these conditions .
Under certain conditions, it may also be possible to tolerise a subject against a particular antigen. The invention thus provides a method for inducing tolerance in a subject towards an antigen, comprising administering to the subject a
composition comprising the antigen and DNG -1+ DC, or antigen pulsed DNGR-1+ DC and wherein the antigen and/or DNGR- 1+ DC is administered or pulsed in the absence of an adjuvant.
DNGR- 1+ DC are believed to be particularly important in the generation of CTL responses, so the immune response to be stimulated is preferably a CTL response. The immune response may involve production and/or proliferation of CTLs, which are typically T cells expressing CD8 and are capable of cytotoxic activity against cells displaying their cognate antigen in the context of HC class I molecules.
In practice, then, the cells produced by the methods of the invention may be used therapeutically or prophylactically to inhibit or suppress an undesirable immune response against a particular antigen, even in a subject with pre-existing immunity or an on-going immune response to that antigen. Thi may be particularly useful (for example) in the treatment of autoimmune disease. It will be understood that the cells produced by the methods of the invention may also be used for the prophylaxis and/or treatment of any condition in which it is desirable to induce a CTL response, such as cancer, or infection by an
intracellular parasite or pathogen, such as a viral infection.
While DNGR- 1+ DC may stimulate a Th2 type response it is thought that CD8a+ DC in mouse are poor Th2 inducers
( aidonado-Lopez et al . , 1999). Thus vaccines or
immunotherapies employing DNGR-1* DC are unlikely to
inadvertently drive a detrimental allergic Th2 immune
response .
The magnitude of the immune response may be assessed by any appropriate criteria, such as appearance of inflammation, swelling, cell proliferation (e.g. of Thl, Th2 or Thl7 CD4+ T cells, or CTLs) or inflammatory cytokine production (e.g. IL- 1, IL-4, IL-12, IFN-gamma, TNF-alpha) . In certain
embodiments, the tolerised individual will display
substantially no immune response to that antigen.
Adjuvants
According to the present invention the methods may utilize DNGR- 1* DC to stimulate an immune response to a target antigen. DNGR- 1+ DC can induce proliferation of both CD8+ T cells and CD4+ T cells (WO2009/013484) , and may stimulate proliferation of both types of T cell in any given immune response.
Therefore, it may be desirable to administer further
immunostimulatory agents in order to achieve maximal CTL stimulation and proliferation, and/or stimulation and
proliferation of other T cell types.
These may include agents capable of activating dendritic cells and stimulating their ability to promote T cell activation.
Such an agent may be referred to as an adjuvant. The adjuvant may comprise an agonist for CD40 (such as soluble CD40 ligand, or an agonist antibody specific for CD40) or an antagonist of CD40 (such as an anti-CD40 antibody), an agonist of CD28, CD27 or OX40 (e.g. an agonist antibody specific for one of those molecules), a CTLA-4 antagonist (e.g. a blocking antibody specific for CTLA-4) , and/or any other agent capable of inducing dendritic cell activation. A Toll -like receptor (TLR) agonist is a substance which activates a Toll-like receptor. The application demonstrates that human DNGR- 1+ DC respond to TLR3 and TLR8 agonists.
Therefore suitable adjuvants include Poly I:C (polyinosine- polycytidylic acid), which binds TLR3 ; resiquimod (R-848; 1- [4-amino-2- (ethoxymethyl) imidazo [4 , 5-c] quinolin-l-yl] -2- methylpropan-2-ol 1- [4-amino-2 - (ethoxymethyl) imidazo [4 , 5- c] quinolin-l-yl] -2-methylpropan-2-ol) or polyU R A which bind TLR7 in mice and are believed to bind TLR8 in humans. For more details, see Reis e Sousa, Toll-like receptors and dendritic cells. Seminars in Immunology 16:27, 2004. Preferably, the TLR agonist is an activator of TLR3 and/or TLR8.
Adjuvants which may not work via TLRs include 5' triphosphat RNA, β-glucans such as curdlan (β-l, 3-glucan) and poly I : C which can function independently of TLRs. Dectin-1 is also expressed by mouse CD8 + DC. Therefore the adjuvant may be a Dectin-1 agonist. Dectin-1 agonists include β-glucans such as curdlan (β-l, 3-glucan) . It may also be desirable to administer an adjuvant during or after contacting the DC population with T cells; and/or before or after the T cells are administered to a subject. The adjuvant selected at this stage will also influence the immune response generated. The adjuvant may comprise an agonist for CD40 (such as soluble CD40 ligand, or an agonist antibody specific for CD40) or an antagonist of CD40 (such as an anti- CD40 antibody), an agonist of CD28, CD27 or OX40 (e.g. an agonist antibody specific for one of those molecules) , a CTLA- 4 antagonist (e.g. a blocking antibody specific for CTLA-4) . T cells respond to a number of TLR agonists. Suitable TLR agonists include MPL (monophosphoryl lipid A) , which binds TLR4 ; LTA ( lipoteichoic acid, which binds TLR2 ; Poly I:C, which binds TLR3 ; flagellin, which binds TLR5 ; resiquimod (R- 848 ; 1- [4-amino-2- (ethoxymethyl ) imidazo [4 , 5-c] quinolin- 1-yl] - 2-methylpropan-2-ol 1- [4-amino-2- (ethoxymethyl) imidazo [4 , 5- c] quinolin-l-yl] -2 -methylpropan-2 -ol ) or polyU R A which bind TLR7 in mice and are believed to bind TL 8 in humans, and CpG (DNA CpG motifs) , which binds TLR9; or any other component which binds to and activates a TLR.
Adjuvants which may not work via TLRs include 5' triphosphate RNA, poly I:C, and β-glucans such as curdlan (β-l, 3-glucan) . Pro- inflammatory cytokines such as TNF-a or IL-1 may also be used as adjuvants. TGF-β can act as an adjuvant promoting the conversion of naive T cells into antigen-specific Tregs in non-inflammatory conditions (Chen et al . , 2003; Coombes et al . , 2007; Luo et al . , 2007; Yamazaki et al . , 2008).
Certain adjuvants promote stimulation of Treg cells. These include IL-12 and retinoic acid, and in particular all-trans retinoic acid (ATRA) , also known as trenitoin. TGF-β can act as an adjuvant promoting the conversion of naive T cells into antigen-specific Tregs in non- inflammatory conditions (Chen et al . , 2003; Coombes et al . , 2007; Luo et al . , 2007; Yamazaki et al . , 2008) .
Thus, when the immune response to be stimulated is a Treg response it may be appropriate to use a Treg-promoting
adjuvant. It may also be possible to stimulate Treg cell stimulation without administration of an adjuvant.
Without wishing to be bound by theory, it is believed that the nature of the adjuvant used may affect the type of response obtained. DNGR- 1+ DC can stimulate both CD4+ T cells and CD8+ T cells, and the nature of the CD4+ response in particular may be affected by the adjuvant used. For example, use of poly I -. C appears to favour generation of a Thl-type CD4+ response.
Curdlan appears to stimulate a Thl7-type CD4+ response while the absence of an adjuvant may result in the development of tolerance to the antigen. That is to say, the immune system is induced not to respond to future administrations of the same antigen. This may (but need not) involve the generation of Treg cells which are capable of active suppression of the response. Thus further administrations of an antigen to a subject who has been tolerised to that antigen should result in a lesser immune response than in a subject who is naive for that antigen (i.e. whose immune system has not previously been exposed to the antigen) .
The methods of the invention may include contacting or
administering a cell, or population of cells with an adjuvant, either sequentially or simultaneously, in the same or separate compositions. Thus the methods of the invention may, but need not, comprise contacting or administering with an adjuvant.
Antigen
The methods of the invention may be used to raise an immune response against a target antigen. The antigen may be any protein or fragment thereof against which it is desirable to raise an immune response, in particular a CTL response, but also a Thl7 response or a Treg response. These may include antigens associated with, expressed by, displayed on, or secreted by cells against which it is desirable to stimulate a CTL response, including cancer cells and cells containing intracellular pathogens or parasites. For example, the antigen may be, or may comprise an epitope peptide from a protein expressed by an intracellular pathogen or parasite (such as a viral protein) or from a protein expressed by a cancer or tumour cell. Thus the antigen may be a tumour- specific antigen. The term "tumour-specific" antigen should not be interpreted as being restricted to antigens from solid tumours, but to encompass antigens expressed specifically by any cancerous, transformed or malignant cell.
It may be particularly desirable to raise a Treg response against an antigen to which the subject exhibits, or is at risk of developing, an undesirable immune response. Thus the Treg response will be to inhibit or suppress an immune response against an antigen. For example, it may be a self antigen against which an immune response occurs in an
autoimmune disease. Examples of autoimmune diseases in which specific antigens have been identified as potentially
pathogenically significant include multiple sclerosis (myelin basic protein) , insulin-dependent diabetes mellitus (glutamic acid decarboxylase) , insulin-resistant diabetes mellitus (insulin receptor) , coeliac disease (gliadin) , bullous pemphigoid (collagen type XVII) , auto-immune haemolytic anaemia (Rh protein) , auto- immune thrombocytopenia
(GpIIb/lIIa) , myaesthenia gravis (acetylcholine receptor) ,
Graves' disease (thyroid- stimulating hormone receptor) , glomerulonephritis, such as Goodpasture's disease
(alpha3 (IV) CI collagen), and pernicious anaemia (intrinsic factor) . Alternatively the target antigen may be an exogenous antigen which stimulates a response which also causes damage to host tissues. For example, acute rheumatic fever is caused by an antibody response to a Streptococcal antigen which cross-reacts with a cardiac muscle cell antigen. Thus these antigens, or particular fragments or epitopes thereof may be suitable antigens for use in the present invention.
The antigen is a peptide antigen. The term "peptide" refers to the nature of the antigen, i.e. that it is formed from amino acids linked by peptide bonds, and should not be taken to imply any particular size or length. Typically the peptide antigen will be at least 8 amino acids in length, and may be up to 30 amino acids in length, up to 50 amino acids in length, up to 100 amino acids, up to 200 amino acids, or even longer and may have residues coupled to the amino acids, such as glycon chains. For example, it may be 25 to 35 amino acids in length.
Without wishing to be bound by any particular theory, the peptide antigen should be capable of binding to a MHC class II or MHC Class I molecule, or should be capable of being processed within an antigen-presenting cell (such as a dendritic cell) to give rise to one or more peptides capable of binding to a MHC class II molecule or MHC Class I molecule. It has recently been suggested that short epitope peptides of around 8 amino acids in length may induce less sustained CTL reactivity than longer peptides (e.g. around 30 amino acids in length) (Bijker, M.S. et al . J. Immunol. 179(8), 5033-5040 (2007) ) . MHC class I molecules typically bind peptides of 8 or 9 amino acids in length, while MHC class II molecules can bind peptides from 8 amino acids up to 20 amino acids, up 30 amino acids, or even longer.
As described above the therapeutic application of the various cells and medicaments will depend on the identity of the antigen and any adjuvant which is used and the nature of the immune response required. For example, they may be used for the treatment of cancer, or for the treatment of an infection with a parasite or a pathogen . Alternatively they may be used in the treatment of an
inflammatory or autoimmune condition, especially a condition characterised by undesirable CTL activity. The condition to be treated may be selected from: - autoimmune diseases, including rheumatoid arthritis and other types of chronic or acute arthritis or arthropathies with an immune component, systemic lupus erythematosus (which is known to involve particularly high levels of cell death) , scleroderma, Sjogren syndrome, autoimmune (particularly Type I) diabetes, thyroiditis, and other organ- specific immune diseases, including psoriasis;
- neurologic diseases, including multiple sclerosis,
myasthenia gravis, and other neurologic immune-mediated diseases. Also included are gastrointestinal diseases, including Crohn's disease, colitis, celiac disease and hepatitis ;
- cardiovascular diseases, which are now recognised to have a significant immune -mediated component, including
atherosclerosis, cardiomyopathy, rheumatic fever,
endocarditis, vasculitis, and other immune -mediated
cardiovascular diseases; - immune-mediated respiratory diseases, including emphysema, respiratory airways infections, and other immune-mediated respiratory diseases;
- allergic processes and hypersensitivity reactions (type I, II, III, and IV) , including asthma, rhinitis, and other immune -mediated hypersensitivity reactions; - transplant or graft rejection and graft versus host disease, as occurs during or subsequent to, for example, organ
transplant, tissue graft, blood transfusion, bone marrow transplant ;
- immunopathological responses to infectious agents, including septic shock syndromes;
- degenerative processes, such as neurodegenerative processes, that implicate immune competent cells such as microglia.
Binding agents
Any suitable molecule having a sufficiently high affinity and specificity for the relevant target molecule (e.g. DNGR-1, BDCA3 , etc.) may be used as a binding agent. The target molecule may be referred to as its binding partner. The binding agent may be a protein, nucleic acid (e.g an aptamer) , carbohydrate (e.g. oligo- or polysaccharide), small molecule, etc. Particularly preferred binding agents are antibodies and functional fragments thereof .
The binding agent preferably has a binding affinity (affinity constant) for its binding partner of at least 105M"1, at least 106Μ_1, at least lO'M"1, preferably at least 108M_1, more
preferably at least 109M_1. Where the binding partner is DNGR-1 it is preferred that the binding agent has the relevant degree of affinity for the extracellular domain (ECD) . The same is true of other cell surface markers such as BDCA3. The binding agent preferably has an affinity at least 2x, and preferably at least 5x, at least lOx, at least 50x or at least lOOx greater than for any other molecule, including other C- type lectins in the case of binding agents for DNGR-1.
In certain aspects of the invention, it is desirable to crosslink an antigen (e.g. a protein or peptide antigen) to a binding agent as described, e.g. in order to target or deliver the antigen to the DNG -1+ DC. The skilled person is well aware of suitable methods and reagents. Where the binding agent is a protein, the antigen may be coupled via a
sulphydryl group of the binding agent . The sulphydryl group may normally be free, or it may normally be part of a
disulphide bond in which case it may be exposed by selective reduction of the binding agent. For example, an antibody can be mildly reduced selectively in the hinge region using the reducing agent mercaptoethanosulfonate . Then, the antigen is activated using sulpho-SMCC, an hetero-bifunctional cross- linking reagent that reacts with the tertiary amines of the protein, generating groups reactive with free sulphydryls. Then, the antibody and the activated antigen are incubated together resulting in the protein being conjugated to the monovalent antibody. Alternatively, if a suitably immunogenic peptide sequence from the antigen is known, such a peptide containing a cysteine with a free sulphydryl can be
synthesized and coupled to sulpho-SMCC activated antibody, which will remain bivalent and with several peptides bound per molecule of antibody.
Antibodies
It is well-known that fragments of a whole antibody can perform the function of binding antigens. Examples of functional binding fragments are (i) the Fab fragment
consisting of VL, VH, CL and CHI domains; (ii) the Fd fragment consisting of the VH and CHI domains; (iii) the Fv fragment consisting of the VL and VH domains of a single antibody; (iv) the dAb fragment (Ward, E.S. et al . , Nature 341, 544-546 (1989)) which consists of a VH domain; (v) isolated CDR regions; (vi) F(ab')2 fragments, a bivalent fragment
comprising two linked Fab fragments (vii) single chain Fv molecules (scFv) , wherein a VH domain and a VL domain are linked by a peptide linker which allows the two domains to associate to form an antigen binding site (Bird et al ,
Science, 242, 423-426, 1988; Huston et al, PNAS USA, 85, 5879- 5883, 1988); (viii) bispecific single chain Fv dimers (PCT/US92/09965) and (ix) "diabodies" , multivalent or
multispecific fragments constructed by gene fusion
(WO94/13804; P. Holliger et al Proc. Natl. Acad. Sci. USA 90 6444-6448, 1993) .
As antibodies can be modified in a number of ways, the term "antibody" should therefore be construed as covering any specific binding substance having a binding domain with the required specificity. Thus, this term covers the antibody fragments described above, as well as derivatives, functional equivalents and homologues of antibodies, including any polypeptide comprising an immunoglobulin binding domain, whether natural or synthetic. Chimaeric molecules comprising an immunoglobulin binding domain, or equivalent, fused to another polypeptide are therefore included. Cloning and expression of chimaeric antibodies are described in EP-A- 0120694 and EP-A- 0125023.
It will be appreciated that the binding agents used in the methods described herein are generally required to bind the extracellular domain of DNGR-1 in order to exert the required effect. Reference to a binding agent capable of binding DNGR- 1 should be construed accordingly, unless the context allows otherwise .
Pharmaceutical compositions
The methods of the invention may be used in the manufacture of medicaments. The medicament may be formulated as
pharmaceutical compositions. These medicaments may comprise, in addition to one of the above substances, a pharmaceutically acceptable excipient, carrier, buffer, stabiliser or other materials well known to those skilled in the art. Such materials should be non-toxic and should not interfere with the efficacy of the active ingredient. The precise nature of the carrier or other material may depend on the route of administration, e.g. oral, intravenous, cutaneous or
subcutaneous, nasal, intramuscular, intraperitoneal routes. Pharmaceutical compositions for oral administration may be in tablet, capsule, powder or liquid form. A tablet may include a solid carrier such as gelatin or an adjuvant. Liquid pharmaceutical compositions generally include a liquid carrier such as water, petroleum, animal or vegetable oils, mineral oil or synthetic oil. Physiological saline solution, dextrose or other saccharide solution or glycols such as ethylene glycol , propylene glycol or polyethylene glycol may be included.
For intravenous, cutaneous or subcutaneous injection, or injection at the site of affliction, the active ingredient will be in the form of a parenterally acceptable aqueous solution which is pyrogen- free and has suitable pH,
isotonicity and stability. Those of relevant skill in the art are well able to prepare suitable solutions using, for example, isotonic vehicles such as Sodium Chloride Injection, Ringer's Injection, Lactated Ringer's Injection.
Preservatives, stabilisers, buffers, antioxidants and/or other additives may be included, as required.
Administration is preferably in a "prophylactically effective amount" or a "therapeutically effective amount" (as the case may be, although prophylaxis may be considered therapy) , this being sufficient to show benefit to the individual. The actual amount administered, and rate and time-course of administration, will depend on the nature and severity of what is being treated. Prescription of treatment, e.g. decisions on dosage etc, is within the responsibility of general practitioners and other medical doctors, and typically takes account of the disorder to be treated, the condition of the individual patient, the site of delivery, the method of administration and other factors known to practitioners.
Examples of the techniques and protocols mentioned above can be found in Remington's Pharmaceutical Sciences, 20th Edition, 2000, pub. Lippincott, Williams & Wilkins. A composition may be administered alone or in combination with other treatments, either simultaneously or sequentially dependent upon the condition to be treated.
Substitutions and sequence identity
A conservative substitution may be defined as a substitution within an amino acid class and/or a substitution that scores positive in the BLOSUM62 matrix.
According to one classification, the amino acid classes are acidic, basic, uncharged polar and nonpolar, wherein acidic amino acids are Asp and Glu; basic amino acids are Arg, Lys and His; uncharged polar amino acids are Asn, Gin, Ser, Thr and Tyr; and non-polar amino acids are Ala, Gly, Val, Leu, lie, Pro, Phe, Met, Trp and Cys .
According to another classification, the amino acid classes are small hydrophilic, acid/acid amide/hydrophilic , basic, small hydrophobic and aromatic, wherein small hydrophilic amino acids are Ser, Thr, Pro, Ala and Gly;
acid/acidamide/hydrophilic amino acids are Asn, Asp, Glu and Gin; basic amino acids are His, Arg and Lys; small hydrophobic amino acids are Met, lie, Leu and Val; and aromatic amino acids are Phe, Tyr and Trp
Substitutions which score positive in the BLOSUM62 matrix are as follows:
Figure imgf000036_0001
Percent (%) amino acid sequence identity with respect to a reference sequence is defined as the percentage of amino acid residues in a candidate sequence that are identical with the amino acid residues in the reference sequence, after aligning the sequences and introducing gaps, if necessary, to achieve the maximum percent sequence identity, and not considering any conservative substitutions as part of the sequence identity. % identity values may be determined by WU-BLAST-2 (Altschul et al., Methods in Enzymology, 266:460-480 (1996)) . WU-BLAST-2 uses several search parameters, most of which are set to the default values. The adjustable parameters are set with the following values: overlap span = 1, overlap fraction = 0.125, word threshold (T) = 11. A % amino acid sequence identity value is determined by the number of matching identical residues as determined by WU-BLAST-2, divided by the total number of residues of the reference sequence (gaps introduced by WU-BLAST-2 into the reference sequence to maximize the alignment score being ignored), multiplied by 100.
Examples Example 1 : Isolating DNGR-1+ BDCA3+ DC from human spleen
Mouse CD8a+ DC have been primarily isolated from spleen and we asked if the latter organ in humans contains DNGR- 1+ BDCA3+ DC. We screened samples from a bank of frozen cell suspensions that had been obtained less than 8h post-mortem by mechanical dissociation of healthy human spleens from cadaveric organ donors. Human DC could be identified in all the samples by flow cytometry as HLA-DR+ cells lacking the lineage (Lin) specific markers CD3 , CD14, CD16, CD19, CD20 and CD56 (Fig. 1A, top left panel) . As in peripheral blood, DNGR- 1 was found to be expressed exclusively by BDCA3hl DC (population I in Fig.
1A, top right panel) . Like mouse CD8 + DC, human spleen DNGR- 1+ BDCA3h DC were negative for CDllb and expressed slightly lower levels of CDllc than other DC (Fig. 1A and Fig. 9) . Human spleen DNGR-1+ BDCA3hi DC also did not express BDCA2 , the pDC marker, or BDCA1 (CDlc) , a more promiscuous marker also used to define human DC subtypes (Fig. 1A and Fig. 9) . The DNGR-1" population included cells lacking BDCA3 (BDCA3", population III in Fig. 1A, top right panel) , as well as cells expressing moderate levels of the marker (BDCA3lnt; population II in Fig. 1A, top right panel) . BDCA3" DC were relatively homogeneous and were mostly negative for CDllc, CDllb, BDCA1 and BDCA2 (Fig. 1A) . In contrast, the BDCA3int population was heterogeneous and included CDllc" BDCA2+ pDC that lacked CDllb and DNGR-1.
Interestingly, BDCA3in cells also included CDllc+ DC that variably expressed BDCA1, BDCA2 and CDllb (Fig. 1A and Fig. 9) . We sorted BDCA1" BDCA2" cells into BDCA3hi, BDCA3int and BDCA3" populations. BDCA3hi DC expressed mRNA for DNGR-1, Necl2 and IRF8 (Fig. IB), similar to mouse CD8 +DC. BDCA3int and BDCA3~ DC expressed low or undetectable levels of DNGR-1, Necl2 and IRF8 mRNA (Fig. IB) . We conclude that BDCA3 can mark multiple human DC subsets, including pDC, but, at high levels of expression and especially in combination with DNGR-1, marks a discrete population of putative CD8 + DC equivalents in human spleen .
Example 2: Obtaining DNG -1+ DC from the lymphoid tissue of mice reconstituted with human stem cells
Two xenotransplantion mouse models were utilized for this purpose: NOD/SCID/ 2m null mice or NOD/SCID/yc null mice reconstituted with purified human CB HSCs. In three
independent successful xenotransplantion cohorts, HLA-DR+ Lin" human DC were found in the spleens of all mice at 8-12 weeks following reconstitution independently of the host mouse strain (Fig 2 and data not shown) . As in human spleen, distinct DC subsets could be defined on the basis of BDCA2, BDCA3 and DNGR-1 expression. They included DNGR-1" BDCA3" BDCA2" DC, as well as DNGR-1" BDCA3int BDCA2+ cells that corresponded to pDC. Notably, a separate population of cells that were
negative for BDCA2 but bright for BDCA3 and positive for DNGR- 1 could also be identified (Fig 2) . These DNGR- 1+ BDCA3hi cells were larger than BDCA2* pDC (Fig. 2) and resembled the ones in human spleen (see above) . Thus, DNGR- 1+ BDCA3hi DC can be found in the spleens of humanized mice, in addition to those of humans . Example 3: Obtaining DNGR-1* DC from human stem cells in vitro
Cultures were set up as a two step procedure: in the first step, HSCs were amplified by culture in the presence of SCF, Flt3L, IL-3 and IL-6. The expanded cells were then aliquoted and tested in a variety of differentiation conditions for the ability to generate DNGR-1+ BDCA3+ DC. A number of factors were tested in different combinations (Fig. 7) . SCF was included to maintain HSC viability. Notably, we found that DNGR- 1+ BDCA3* DC could be obtained after culture with SCF,
Flt3L, GM-CSF and IL-4 (Fig. 2A, and Fig. 7) . DNGR- 1+ BDCA3+ DC could also be obtained by substituting Flt3L for TGF-β (Fig.7 and Fig. 8) . Using HLA-DR and CDla expression as a phenotypic definition of in vitro HSC-derived DCs (Klechevsky et al . , 2008) , we found that this culture system generated around 30-
50% of Lin" HLA-DR+ cells, which included a small percentage of the desired DNGR-1* BDCA3* double positive subset (Fig. 3A) . Omission of any one of the four cytokines, SCF, Flt3L, GM-CSF or IL-4, from the differentiation cocktail prevented the emergence of the cells (Fig. 10A) although DNGR- 1+ BDCA3+ cells could still be obtained when substituting TGF-β for Flt3L (data not shown) . DNGR- 1+ BDCA3+ cells were not seen at 6 days of the differentiation culture but represented 3-6% of total live cells by 12 days, suggesting that they differentiate or expand as a late event. As for the cells in primary human spleen, cord blood-derived DNGR- 1+ BDCA3* DC did not express CD14, CDllb or BDCA2 but expressed CDllc (Fig. 3D and Fig.
10B) . In contrast to primary human spleen DNGR- 1+ BDCA3hl DC, those from CBDC expressed BDCA1 (Fig. 3D) , perhaps due to GM- CSF driven induction of CDla-c family members (Porcelli et al., 1992). Cord blood-derived DNGR-1+ BDCA3* DC expressed CD86, CD45RO but only low levels of CD123 (Fig. 3D) , as reported for blood BDCA3+ DC (MacDonald et al . , 2002) . In contrast to mouse CD8a+ DCs, DNGR-1+ BDCA3+ DC did not express CD8a or CD103. They also did not express high levels of EpCam, indicating that they were not Langerhans cells (Bursch et al. , 2007). Finally, cord blood-derived DNGR-1+ BDCA3+ DC appeared immature in that they did not express CD40, CD83 or CCR7 (Fig. 3D) . Consistent with immaturity, DNGR- 1+ BDCA3+ DC were not noticeably dendritic until the CBDC cultures were treated with poly I:C (see below) to promote DC maturation (Fig. 3C) . Thus, immature DNGR- 1* BDCA3+ DC phenotypically similar to primary human spleen DNGR- V BDCA3hi DC and to blood BDCA3+ DC can be generated in vitro from human HSCs .
Example 4: DNGR-1+ DC derived from HSCs and mouse CD8a+ DC express similar markers
To establish a possible equivalence between DNGR-1+ BDCA3+ human DC and mouse CD8 + DC, we analyzed the expression of selected gene products by quantitative PCR. As for the cells isolated from human spleen (Fig. IB), DNGR- 1+ DC purified from bulk CBDC cultures or from the spleens of humanized mice expressed mRNA for DNGR-1, Necl2 and IRF8 (Fig. 4) . IRF8 (and DAP12) was expressed at higher levels by BDCA2+ pDC isolated in parallel from humanized mice (Fig. 4) , consistent with data in the mouse (Schiavoni et al . , 2002) . In contrast, the same pDC did not express Necl2 or DNGR-1 (Fig. 4) . Similar to mouse CD8a+
DC, human DNGR- 1+ DC expressed CD207 and BATF3 but did not express mRNA for IRF4 or TLR7, which was restricted to pDC (Fig. 4) . Interestingly, TLR9 expression was also not
expressed by DNGR- 1+ DC but was expressed by pDC (Fig. 4). This is different from the situation with mouse CD8 + DC, which express TLR9. Finally, DNGR- 1+ DC but not pDC taken from humanized mice expressed TLR3 and TLR8 (Fig. 4) . DNGR-1* cells from CBDC cultures only expressed very low levels of the same TLRs (Fig. 4), possibly due to immaturity. Consistent with the latter, DNGR-1* CBDC upregulated TLR3 and TLR8 (but not TLR7) upon treatment with type I interferon, a known inducer of nucleic acid-sensing TLRs (data not shown) .
Example 5 : DNGR-1+ DC respond to adjuvants
Mouse CD8 + DCs express TLR3 but not TLR7 mRNA and respond to poly I:C, a TLR3 (and MDA5/RIG-I) agonist, but not to imiquimod (R837) , an agonist for TLR7 (Edwards et al . , 2003). We purified DNGR-1+ DC from CBDC cultures or from humanized mouse spleen and stimulated them with poly I:C or imiquimod. Independently of the source, DNGR- 1+ DC consistently responded to poly I:C but not imiquimod with production of TNF, IL-6 and other cytokines (Fig. 5A and data not shown) . A similar response pattern was seen with total unfractionated CBDC when measuring TNF production or surface HLA-DR upregulation as a marker of DNGR- 1+ DC maturation (Fig. 11) . In contrast, BDCA2+ pDC from humanized mice responded to imiquimod but not poly
I:C in the same experiments (Fig. 5A) . Notably, when trying various other TLR agonists, we noted that DNGR-1* DC also responded to resiquimod (R848) and poly U (Fig. 5B) . In the mouse, where there is lack of functional TLR8 expression, these compounds have been defined as TL 7 agonists (Diebold et al . , 2004) . However, in the human, they are reported to additionally stimulate TLR8 (Heil et al . , 2004) . The potent response of DNGR- 1+ BDCA3+ DC to resiquimod and poly U but not imiquimod, therefore, indicates that these cells express functional TLR8, consistent with the mRNA analysis above.
Example 6: Human DNGR-1+ DC produce IL-12 in response to innate and T cell-derived stimuli
A hallmark of mouse CD8a+ DC is their ability to produce high levels of IL-12 in response to TLR agonists, especially in synergy with signals through the CD40, IL-4, G -CSF or IFN-γ receptors (Shortman and Heath, 2010) . DNGR- 1+ DC purified from CBDC cultures produced no IL-12 p70 above background in response to stimulation with a cocktail of TLR agonists, even when these were given together with IL-4 and IFN-γ, as well as antigen-specific T cells (Fig. 5C) . However, the same cells produced IL-12 p70 when antigen was added to the cultures (Fig. 5C) . Notably, this was also the case for primary DNGR- 1+ DC isolated directly from human spleen cell suspensions (Fig. 5C) . Thus, coordinate delivery of innate and T cell derived stimuli reveals the ability of DNGR- 1+ BDCA3+ DC to produce bioactive IL-12. Example 7 : DNGR-1+ DC internalize dead cell material and cross- present exogenous proteins to CD8+ T cells
Another attribute of mouse CD8 + DC is their superior capacity to internalize debris from dead or dying cells (Iyoda et al . , 2002 ; Schulz and Reis e Sousa, 2002) . DNGR- 1+ DC were able to take dead cell material and were superior in this regard to monocyte-derived DC (Mo-DCs) generated with GM-CSF + IL-4
(Sallusto et al . , 1995) (Fig. 6A) . Internalized dead cell material showed up as multiple small inclusions within a single DNGR-1+ DC by confocal microscopy (Fig. 6A) . Finally, we assessed the ability of DNGR- 1+ BDCA3+ DC to cross present exogenous antigen to CD8+ T cells, a functional characteristic of mouse CD8 + DC. In the first instance, we used
unfractionated CBDC cultures and compared them to Mo-DCs.
Unfortunately, the CBDC used for these experiments were only 50% HLA-A2+ as they were generated from HSCs purified from pooled CB, whereas Mo-DCs were from a single donor and
homogenous for HLA-A2 expression (data not shown) . This might be one reason why CBDC were less efficient than Mo-DC at presenting pre-processed antigenic peptides to HLA-A2- restricted T cell clones (Fig. 12). Nevertheless, CBDC were at least as efficient as Mo-DCs at activating NY-ESO-li57-i65- specific T cells in response to intact recombinant NY-ESO-1 protein, a clinically relevant antigen expressed by a broad range of tumor types (Chen et al . , 2005) (Fig. 12). The activation of the NY-ESO-specific T cell clone reflected true NY-ESO-1 protein processing and cross-presentation as it was not seen with DC that were fixed in glutaraldehyde , even though the latter were still able to present the pre-processed determinant (Fig. 12) . Interestingly, this cross-presenting ability was only revealed upon treatment of DC with poly I:C (Fig. 12) , underscoring the importance of DC maturation in promoting antigen processing and presentation (Delamarre et al . , 2003 ; Inaba et al., 2000). Finally, we tested purified DNGR- 1+ HLA-A2+ CBDC in a different model of cross-presentation. 00623 We used a long Melan-A derived peptide that requires
processing for its (cross) presentation to a specific HLA-A2- restricted T cell line (Faure et al . , 2009). As for the ΝΎ- ESO-1 protein, presentation of the long Melan-A peptide was only seen upon treatment of the DC with poly I:C (Fig. 6B) .
DNGR-1+ DC were more efficient at cross-presenting the long peptide than Mo-DC DC, even though the latter were more efficient at presenting the short peptide, representing the pre-processed determinant. We conclude that DNGR-1+ DC have an equal or superior cross presentation ability to that of Mo-
DCs .
Methods
Human tissue
Cell suspensions of human cadaveric spleen from healthy victims of traffic accidents (organ donors) were prepared less than 8 hours post mortem by mechanical dissociation followed by Ficoll density centrifugation . Cells were frozen and stored in liquid nitrogen until use. The procedure was
approved by the Ethics Committee of Hopital Erasme, Brussels,
Belgium. Cord blood was collected from mothers attending the Royal London Hospital, London, UK, after informed consent through a protocol approved by the Local Research Ethics Committee. Mononuclear cells were obtained by Ficoll density centrifugation and ammonium chloride red cell lysis. They were depleted for lineage marker positive cells using the StemSep™ system (Stem Cell Technologies, Canada) to
generate Lin" HSCs . Humanized mice
All animal protocols were carried out under the authority of a project license, in accordance with UK governmental
regulations (Animal Scientific Procedures Act 1986) .
NOD/SCID/ 2microglobulin null mice and NOD/Shi-scid/lL-2RYnull (NSG) mice were bred at Charles Rivers Laboratories (Moorgate,
UK) , housed in micro-isolators and fed sterile food and acidified water. Mice aged 8-12 weeks were sublethally 11000623 irradiated (3.75 Gy) up to 24 hours before i.v. injection of 50 000 Lin" human CB cells. Mice were analyzed 8 to 24 weeks after reconstitution. Spleen cells were prepared by digestion with liberase and DNAse, followed in some cases by an Optiprep gradient to enrich for low density cells (Sigma-Aldrich) .
In vitro generated DC
Human Lin" CB cells were prepared as described above and differentiated into DC using a two-step protocol. In the first step (amplification) , Lin" cells were cultured at 5xl04 cells/ml in StemSpan serum-free medium (StemCell Technologies) with penicillin, streptomycin, 100 ng/ml SCF, 100 ng/ml Flt3L, 20 ng/ml IL-3 and 20 ng/ml IL-6 (R&D Systems) . After 7-11 d of culture, the expanded cells were frozen until further use or were used directly. In the second step (differentiation) ,
6.25X104 cells/ml were plated in RPMI 1640 supplemented with glutamine, penicillin, streptomycin, 2-ME (all from
Invitrogen) , 10% hea -inactivated fetal calf serum (Autogen Bioclear) , 20 ng/ml SCF, 20ng/ml GM-CSF, 20 ng/ml IL-4, 100 ng/ml Flt3L (R&D Systems) . Cultures were kept for 12-14 d and cytokines were replenished after 6-7 d. Monocyte derived-DCs were prepared as described (Salio et al . , 2001).
Alternatively, in the second step (differentiation), 6.25xl04 cells/ml were plated in RPMI 1640 supplemented with glutamine, penicillin, streptomycin, 2-ME (all from Invitrogen) , 10% heat- inactivated fetal calf serum (Autogen Bioclear) , 20 ng/ml SCF, 20ng/ml GM-CSF, 20 ng/ml IL-4, 10 ng/ml TGF-β (R&D
Systems) . Cultures were kept for 6d. Particularly high yields of differentiated DCs were obtained when using culture plates having round-bottomed or "V" -bottomed wells. Monocyte
derived-DCs were prepared as described (Salio et al . , 2001).
Antibodies
Anti-HLA-DR (L243), anti -Lineage-1 cocktail (CD3 , CD14, CD16, CD19, CD20, CD56) , anti-BDCA-3/CD141 (1A4) , anti-CD123 (7G3), anti-CDllc (B-ly6) , anti-CD80 (L307.4), anti-CD8a (RPA-T8) , anti-CD14 (M5E2) , anti-CD3 (UCHT1) , anti-CD16 (3G8), anti-CD19 011000623 (HIB19) , and anti-CD56 (B159) were from BD Pharmingen. Anti- BDCA-2/CD303 (AC144), anti -BDCA- 1/CDlc (AD5-8E7) , anti-CD83 (HB15) , anti-EpCam/CD326 (HEA-125) and anti -CCR7/CD197 (FR11- 11E8) were from Miltenyi Biotec . Anti-CDla (201B5.08) was from Dendritics. Anti-CD45RO (UCHL1) , anti-CD103 (B-Ly7) , anti-CD40
(5C3), anti-CDllb (ICRF44) , anti-CD20 (2H7) and isotype- matched control antibodies were from eBioscience. Anti-hDNGR-1 was described previously (Sancho et al . , 2008) . Flow cytometry and cell sorting
Cells were pre-incubated on ice with mouse serum (Jackson ImmunoResearch) and purified IgG2a (BD Pharmingen) to block Fc receptors and then stained with appropriate antibody
combinations. To avoid cell clumping, primary human spleen cell suspensions were kept in DNase containing buffer during the different procedures. Multiparameter analysis was
performed using mainly a LSRII flow cytometer (BD
Biosciences) , except for primary human spleen cell
suspensions, which were analyzed on a FACSAria (BD
Biosciences) . Dead cells were excluded by a combination of scatter gating and DAPI exclusion. Analysis was performed using FlowJo software (Treestar) . For cell sorting (FACSAria) , primary human spleen cell suspensions, in vitro generated DC or low density cells from humanized mice were stained as above. Electronic gates were placed on live Lin" HLA-DR+ cells and cells were sorted for example into BDCA2* and BDCA3+, or into BDCA3+/DNGR-1+; or into BDCA3hi/BDCA2'/BDCA1" ,
BDCA3int/BDCA2"/BDCAl" and BDCA3"/BDCA2"/BDCA1" subsets, as appropriate .
Stimulation with TL agonists
Sorted DC populations were cultured at 10s cells/ml with selected TLR agonists (Invivogen) used at pre-determined optimal concentrations. Cytokine accumulation in supernatants was measured after 16h using a Becton Dickinson Cytometric
Bead Array. Bulk CBDC were stimulated for 16h as above with varying concentrations of TLR3 or TLR7 agonists for assessment of cytokine secretion or HLA-DR upregulation by flow
cytometry. For IL-12p70, sorted HLA-A2 -expressing DC
populations were cultured at 5xl04 cells/ml with a mix of different stimuli: TLR 1-9 agonists (human TLR agonist 1-9, Invivogen) used at pre -determined optimal concentra ions, IL-4
(10 g/ml) , and IFNy (lO g/ml) (R&D Systems) in the presence or absence of Ιμ of MelanA/MART- 1 short peptide and 5xl04
MelanA-specific HLA-A2 -restricted CD8+ T cells. RNA isolation and quantitative RT-PC
RNA from FACS -sorted DC subsets was extracted with an RNeasy Micro Kit and treated with DNase I, according to the
manufacturer's protocol (QIAGEN) . cDNA was synthesized from total RNA with random hexamer primers and Superscript II RT (Invitrogen) . Quantitative PCR was performed with Taqman
Universal PCR MasterMix (Applied Biosystems) and preformulated primers and probe mixes (Taqman® Gene Expression Assays;
Applied Biosystems) . Measurements were performed using a sequence detection system (ABI PRISM 7700; Applied
Biosystems) . Levels of mRNA for the specific gene being measured were divided by those of GAPDH measured in parallel (normalized expression) .
Uptake of dead cells
Human melanoma cells were UV irradiated (2400 J/cm2), incubated for 8 h at 37°C to allow for apoptosis and secondary necrosis and labeled with CFSE (flow cytometry) or Alexa633-SE
(confocal microscopy) . Dead cells were added to 5xl04 CBDC or Mo-DC at different ratios for 2 hours at 4°C or 37°C. For confocal microscopy, cells were subsequently plated on fibronectin coated coverslips for 15 min, fixed in 3.7% paraformaldehyde/PBS for 10 min, permeabilized in 0.1% Triton- XIOO/PBS for 3 min, blocked with 5% mouse serum and stained for DNGR-1 using Alexa546 coupled antibody. Coverslips were mounted in Fluoromount-G and imaged with a laser scanning confocal microscope Axiovert 100M LSM 510 (Zeiss) with a 63x Plan-Apochromat NA 1.4 oil objective. For flow cytometric analysis, cells were stained for DNGR-1 and BDCA3 and the percentage of CFSE-positive DNGR-1* BDCA3+ cells was calculated by subtracting the frequency of positive events at 4°C
(binding) from the frequency at 37°C (binding + uptake) .
Antigen presentation assays
NY-ESO-l1S7-i65 peptide (Chen et al . , 2000) or NY-ESO-1 full length protein (kindly provided by the Ludwig Institute of Cancer Research) and the elanA/MART-1 short (ELAGIGILTV) or long (KGHGHSYTTAEEAAGIGILTVILGVL) peptides were used as antigen sources. Antigen presentation assays were carried out as previously described (Faure et al . , 2009; Salio et al . , 2001 ) using HLA-A2 -restricted NY-ESO-1- or MelanA-specific CD8+ T cells.
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Claims

Claims :
1. A method of obtaining a dendritic cell (DC) population comprising one or more DNGR-1 expressing dendritic cells
(DNGR-1+ DC) , the method comprising the step of contacting a hematopoietic stem cell (HSC) with a differentiation cocktail ex vivo or in vitro, wherein the differentiation cocktail is selected from:
a) GM-CSF, IL-4 and Flt3L or;
b) GM-CSF , IL-4 and TGF-β.
2. The method of claim 1 further comprising contacting the HSC with a stem cell viability factor.
3. The method of any one of the preceding claims wherein the stem cell viability factor is SCF.
4. The method of any one of the preceding claims wherein the differentiation cocktail is replenished during the contacting step.
5. The method of any one of the preceding claims wherein the method comprises:
a) providing a first cell population comprising one or more HSCs, and;
b) expanding the number of HSCs in said first cell population to yield a second cell population and;
c) contacting the second cell population with the
differentiation cocktail.
6. The method of claim 5 wherein step (b) comprises
contacting the first cell population with one, more than one, or all of SCF, Flt3L, IL-3 and IL-6.
7. The method of any one of the preceding claims wherein the HSCs are obtained from a sample of embryonic yolk sac, the embryonic aorta-gonad-mesonephrous region, fetal liver or spleen, adult spleen, adult bone marrow, fetal bone marrow, untreated peripheral blood, mobilized peripheral blood, or umbilical cord blood.
8. The method of claim 6 or 7 further comprising the step of depleting the sample for cells expressing lineage positive markers .
9. The method of claim 8 further comprising the step of positive selection for cells expressing HSC markers.
10. The method of any one of the preceding claims wherein the HSCs are contacted with the differentiation cocktail for at least 6 days .
11. The method of any one of the preceding claims wherein the HSCs are human HSCs .
12. The method of any one of the preceding claims further comprising the step of isolating DNGR-1+ DC, or a population thereof .
13. The method of claim 12 wherein the step of isolating is performed using a binding agent capable of binding to DNGR-1.
1 . The method of claim 13 wherein the binding agent is an antibody, or fragment thereof, against DNGR-1.
15. The method of claim 12 further comprising the step of positive selection for cells expressing BDCA3.
16. The method of claims 12 or 15 further comprising the step of positive selection for cells expressing HLA-DR.
17. A method of obtaining a DC population comprising one or more DNGR-1+ DC, the method comprising: a) obtaining cells from the lymphoid tissue of a rodent reconstituted with xenogeneic HSCs, and;
b) isolating DNGR-1+ DC.
18. The method of claim 17 further comprising:
a) providing an immunocompromised rodent and;
b) introducing xenogeneic HSCs into said rodent to obtain a rodent reconstituted with xenogeneic HSCs.
19. The method of claim 17 wherein step b) further comprises positive selection for cells expressing BDCA3 and/or HLA-DR.
20. The method of any one of claims 17 to 19 wherein the rodent is a NOD/SCID/ 2m null mouse.
21. The method of any one of claims 17 to 19 wherein the rodent is a NOD/SCID/yc null mouse.
22. The method of claim 17 to 21 wherein the HSCs are human HSCs .
23. The method of any one of claims 17 to 22 wherein the lymphoid tissue is derived from the spleen.
24. The method of any one of the preceding claims further comprising the step of contacting a DNGR-1+ DC, or population thereof, with an antigen to obtain an antigen-pulsed DC.
25. A DC population comprising one or more DNGR-1+ DC as obtained or obtainable by the method of any one of claims 1 to
16.
26. A DC population according to claim 25 further comprising one or more plasmacytoid dendritic cells (pDC) .
27. A method comprising the step of contacting the DC population of claims 25 or 26 with an antigen to obtain an antigen-pulsed DC.
28. The method of claim 24 or claim 27 wherein the DC, or population thereof, and the antigen are contacted ex vivo, or in vitro.
29. The method of claim 28 further comprising the step of contacting the DC, or population thereof, with an adjuvant.
30. The method of claim 29 wherein the DC, or population thereof, is contacted with the adjuvant and the antigen at substantially the same time.
31. The method of any one of claims 28 to 30 further
comprising the step of administering the DC cell, or
population thereof, to a subject.
32. The method of claim 24 or claim 27 wherein the antigen is, or comprises, a peptide from a protein expressed by a pathogen or parasite, or a protein from a cancer cell.
33. The method of claim 24 or claim 27 wherein the antigen is a viral protein or a tumour-specific antigen.
34. The method of claim 24 or claim 27 wherein the antigen is an antigen to which a subject exhibits, or is at risk of developing, an undesirable immune response.
35. The method of claim 24 or claim 27 further comprising the step of contacting the antigen-pulsed DC, or population thereof, with one or more T cells.
36. The method of claim 35 further comprising the step of expanding the number of T cells.
37. The method of claim 35 further comprising the step of administering the T cells to a subject.
38. The method of claim 35 wherein the DC, and the T cells are autologous .
39. The method of claim 35 wherein the T cells and the DC are derived from the same subject.
40. The method of claim 37 wherein the T cells are
administered to the subject from whom they are derived.
41. The method of any one of claims 35 to 40 further
comprising the step of administering an adjuvant.
42. A DC population as obtained or obtainable by the method of any one of claims 1 to 23, for use in a method of
treatment .
43. A DC population as obtained or obtainable by the method of any one of claims 1 to 23, for use in the treatment of any of the following: cancer; infection with a parasite or a pathogen; an inflammatory condition; or an autoimmune
condition.
44. An antigen-pulsed DC population as obtained or obtainable by the method of any one of claims 24 and 27 to 34, for use in a method of treatment.
45. An antigen-pulsed DC population as obtained or obtainable by any of the method of claims 24 and 27 to 34, for use in the treatment of any of the following: cancer; infection with a parasite or a pathogen; an inflammatory condition; or an autoimmune condition.
46. A population of T cells as obtained or obtainable by the method of any one of claims 35 to 41 for use in a method of treatment .
47. A population of T cells as obtained or obtainable by the method of any one of claims 35 to 41, for use in the treatment of any of the following: cancer; infection with a parasite or a pathogen; an inflammatory condition; or an autoimmune condition.
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