WO2010011884A3 - Novel nucleic acid-based molecular probes - Google Patents
Novel nucleic acid-based molecular probes Download PDFInfo
- Publication number
- WO2010011884A3 WO2010011884A3 PCT/US2009/051632 US2009051632W WO2010011884A3 WO 2010011884 A3 WO2010011884 A3 WO 2010011884A3 US 2009051632 W US2009051632 W US 2009051632W WO 2010011884 A3 WO2010011884 A3 WO 2010011884A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- nucleic acid
- aptamer
- based molecular
- novel nucleic
- molecular probes
- Prior art date
Links
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/115—Aptamers, i.e. nucleic acids binding a target molecule specifically and with high affinity without hybridising therewith ; Nucleic acids binding to non-nucleic acids, e.g. aptamers
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
- G01N33/582—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
- C12N2310/16—Aptamers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/30—Chemical structure
- C12N2310/35—Nature of the modification
- C12N2310/351—Conjugate
- C12N2310/3515—Lipophilic moiety, e.g. cholesterol
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/30—Chemical structure
- C12N2310/35—Nature of the modification
- C12N2310/351—Conjugate
- C12N2310/3517—Marker; Tag
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/30—Chemical structure
- C12N2310/35—Nature of the modification
- C12N2310/351—Conjugate
- C12N2310/3519—Fusion with another nucleic acid
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/50—Physical structure
- C12N2310/53—Physical structure partially self-complementary or closed
Abstract
The subject invention provides a novel nucleic acid-based molecular probe design employing intramolecular signal transduction. In an embodiment specifically exemplified herein, the probe comprises four elements: an aptamer; a short, partially complementary DNA sequence; a PEG linker conjugating the aptamer with the short DNA strand; and a luminescent molecule attached to a terminus of the aptamer and a terminus of the DNA sequence.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US13592708P | 2008-07-25 | 2008-07-25 | |
US61/135,927 | 2008-07-25 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2010011884A2 WO2010011884A2 (en) | 2010-01-28 |
WO2010011884A3 true WO2010011884A3 (en) | 2010-05-06 |
Family
ID=41570876
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US2009/051632 WO2010011884A2 (en) | 2008-07-25 | 2009-07-24 | Novel nucleic acid-based molecular probes |
Country Status (1)
Country | Link |
---|---|
WO (1) | WO2010011884A2 (en) |
Families Citing this family (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101812528B (en) * | 2010-04-26 | 2012-07-04 | 湖南大学 | Switch mode aptamer probe and application thereof in tumor living cell and vital detection |
US10077474B2 (en) | 2012-05-29 | 2018-09-18 | Abbott Molecular, Inc. | Method of designing primers, method of detecting single nucleotide polymorphisms (SNPs), method of distinguishing SNPs, and related primers, detectable oligonucleotides, and kits |
CN102735669A (en) * | 2012-07-02 | 2012-10-17 | 湖南大学 | Nucleic acid aptamer molecular beacon probe for detection of platelet-derived growth factor |
WO2020188323A1 (en) * | 2019-03-18 | 2020-09-24 | Khashayar Karimian | Mate and separate: a convenient and general method for the separation and purification of target molecules from biological media by phase transition of pegylated recognition agents. |
CN110161240B (en) * | 2019-05-29 | 2020-10-09 | 福州大学 | Pseudomonas aeruginosa detection method based on aptamer fluorescence sensing |
Citations (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5925517A (en) * | 1993-11-12 | 1999-07-20 | The Public Health Research Institute Of The City Of New York, Inc. | Detectably labeled dual conformation oligonucleotide probes, assays and kits |
US6037130A (en) * | 1998-07-28 | 2000-03-14 | The Public Health Institute Of The City Of New York, Inc. | Wavelength-shifting probes and primers and their use in assays and kits |
US20050176023A1 (en) * | 2003-08-01 | 2005-08-11 | Dynal Biotech Inc. | Self-hybridizing multiple target nucleic acid probes and methods of use |
US20050214797A1 (en) * | 2003-10-28 | 2005-09-29 | Epoch Biosciences, Inc | Fluorescent probes for DNA detection by hybridization with improved sensitivity and low background |
US20060088856A1 (en) * | 2004-08-13 | 2006-04-27 | Stratagene California | Dual labeled fluorescent probes |
US20060194240A1 (en) * | 2005-02-28 | 2006-08-31 | Gen-Probe Incorporated | Compositions and methods of detecting an analyte by using a nucleic acid hybridization switch probe |
US20060292592A1 (en) * | 2005-02-09 | 2006-12-28 | Stratagene California | Key probe compositions and methods for polynucleotide detection |
-
2009
- 2009-07-24 WO PCT/US2009/051632 patent/WO2010011884A2/en active Application Filing
Patent Citations (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5925517A (en) * | 1993-11-12 | 1999-07-20 | The Public Health Research Institute Of The City Of New York, Inc. | Detectably labeled dual conformation oligonucleotide probes, assays and kits |
US6037130A (en) * | 1998-07-28 | 2000-03-14 | The Public Health Institute Of The City Of New York, Inc. | Wavelength-shifting probes and primers and their use in assays and kits |
US20050176023A1 (en) * | 2003-08-01 | 2005-08-11 | Dynal Biotech Inc. | Self-hybridizing multiple target nucleic acid probes and methods of use |
US20050214797A1 (en) * | 2003-10-28 | 2005-09-29 | Epoch Biosciences, Inc | Fluorescent probes for DNA detection by hybridization with improved sensitivity and low background |
US20060088856A1 (en) * | 2004-08-13 | 2006-04-27 | Stratagene California | Dual labeled fluorescent probes |
US20060292592A1 (en) * | 2005-02-09 | 2006-12-28 | Stratagene California | Key probe compositions and methods for polynucleotide detection |
US20060194240A1 (en) * | 2005-02-28 | 2006-08-31 | Gen-Probe Incorporated | Compositions and methods of detecting an analyte by using a nucleic acid hybridization switch probe |
Also Published As
Publication number | Publication date |
---|---|
WO2010011884A2 (en) | 2010-01-28 |
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