WO2009150222A2 - Improved protein expression system - Google Patents

Improved protein expression system Download PDF

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Publication number
WO2009150222A2
WO2009150222A2 PCT/EP2009/057278 EP2009057278W WO2009150222A2 WO 2009150222 A2 WO2009150222 A2 WO 2009150222A2 EP 2009057278 W EP2009057278 W EP 2009057278W WO 2009150222 A2 WO2009150222 A2 WO 2009150222A2
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Prior art keywords
seq
sequence
promoter
dna polynucleotide
cell
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PCT/EP2009/057278
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French (fr)
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WO2009150222A3 (en
WO2009150222A9 (en
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Charlotte Dyring
Willem Adriaan De Jongh
Peter Birk Rasmussen
Helene Lykkegaard
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Affitech A/S
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Priority to AU2009256566A priority Critical patent/AU2009256566B2/en
Priority to DK09761784.9T priority patent/DK2307543T3/en
Priority to EP09761784.9A priority patent/EP2307543B1/en
Priority to ES09761784.9T priority patent/ES2543730T3/en
Priority to JP2011512990A priority patent/JP5374584B2/en
Priority to CA2727628A priority patent/CA2727628C/en
Priority to US12/997,072 priority patent/US9371533B2/en
Priority to CN200980131122.1A priority patent/CN102119215B/en
Publication of WO2009150222A2 publication Critical patent/WO2009150222A2/en
Publication of WO2009150222A3 publication Critical patent/WO2009150222A3/en
Publication of WO2009150222A9 publication Critical patent/WO2009150222A9/en

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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
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    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
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    • C07KPEPTIDES
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    • C07K14/43504Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates
    • C07K14/43563Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from invertebrates from insects
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/65Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression using markers

Definitions

  • Protein production systems in which polypeptides or proteins of interest are produced in recombinant organisms or cells, are the backbone of commercial biotechnology.
  • Prokaryotic cell culture systems are easy to maintain and cheap to operate. However, prokaryotic cells are not capable of post-translational modification of eukaryotic proteins.
  • mammalian cells are capable of post-translational modification, and generally produce proteins which are correctly folded and soluble.
  • the chief disadvantages of mammalian cell systems include the requirement for specialised and expensive culture facilities, the risk of infection, which can lead to loss of the whole culture, and the risk of contaminating the end product with potentially hazardous mammalian proteins.
  • Insect cells are also used for polypeptide expression.
  • the most widespread expression system used in insect cells is based on baculovirus vectors.
  • a baculovirus expression vector is constructed by replacing the polyhedrin gene of baculovirus, which encodes a major structural protein of the baculovirus, with a heterologous gene, under the control of the strong native polyhedrin promoter.
  • Cultured insect host cells are infected with the recombinant virus, and the protein produced thereby can be recovered from the cells themselves or from the culture medium if suitable secretion signals are employed.
  • These systems also, however, suffer from problems associated with reproducibility of expression level and quality, infection of the culture, and may require specialised culture facilities.
  • baculovirus stocks, which for the production of certain proteins may have to be made under GMP conditions, is not always stable over time.
  • Suitable promoters used in Drosophila melanogaster S2 cells for protein expression also include the pMT promoter and the P2ZOp2F (0PIE2 promoter)
  • Angelichio ⁇ t al. Nucleic Acids Research, Vol. 19, No. 18 5037-5043, 1991 relates to a comparison of several promoters and polyadenylation signals for use in heterologous gene expression in cultured Drosophila cells.
  • the present invention relates to promoter DNA polynucleotides, suitable for use in the heterologous expression of a polypeptide of interest.
  • the present invention relates to an isolated DNA polynucleotide, a so-called expression vector, comprising such promoter DNA polynucleotides suitable for expression and production in relatively high amounts of a protein of interest, such as therapeutically effective proteins or industrial enzymes.
  • the present invention relates to a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
  • a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell ;
  • a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
  • a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
  • the present invention relates to an isolated DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell the DNA polynucleotide comprising
  • nucleotide sequence with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
  • SEQ ID NO: 5 SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus;
  • a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
  • the present invention relates to a method for the production of a polypeptide of interest encoded by a polynucleotide the method comprising the steps of
  • a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 6 nucleotides and including consecutive nucleotide stretches from at least 6 nucleotides and including consecutive nucleotide stretches from at least 6 nucleotides and including consecutive nucleotide stretches from at least
  • step (c) transforming a host cell with the polynucleotide obtained under step (b); (d) allowing for the expression of the polynucleotide obtained under step (b) to produce the polypeptide;
  • SEQ ID NO: 5 SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus;
  • step (c) transforming a host cell with the polynucleotide obtained under step (b); (d) allowing for the expression of the polynucleotide obtained under step (b) to produce the polypeptide;
  • Fig. 1 Normalized protein expression level compared to the pOPIE2 promoter in the p2ZOP2F vector for different transfections of a mutant Actin5C promoter for stable and transient transformations.
  • (b)..(d) refers to separate transfections using the mutant Actin5C promoter containing plasmid pHPll.
  • Fig. 2 Expression level of the full-length and truncated HSP70 promoter during transient expression. pOPIE2 was used as control in the experiment.
  • Fig. 4 Normalized expression levels achieved during transient transfection. These include three versions of the mutated Actin5C promoter (the full-length promoter, (2) a truncated version (vector pHP17) and (3) the 612bp shortest truncation version), the truncated HSP70 promoter and the pOPIE2 promoter as control.
  • Fig. 5 Expression levels in transient transfection of pOPIE2 and the Actin5C core and HSP70 core promoters.
  • Fig. 6 illustrates one suitable vector, pHP15c_su(hw) vector, according to the invention
  • Fig. 8 Comparison of the expression levels of the Actin-HSP70 core hybrid promoter and the truncated Actin 5c promoter (named Promoter pl_var 2 in graph). Duplicate transient expression experiments. (See table A3 for raw data).
  • Fig. 9 Effect of adding either the intron or two flanking matrix attachment regions to the pHP34s-hybrid vector.
  • the experiments were conducted as triplicate shake flask experiments using stable polyclonal cell lines made from independent triplicate transfections. (See table A2 for raw data).
  • A Vector map for pHP34s-hybrid vector containing a RANKL encoding region.
  • B The original pHP34s vector containing the truncated actin 5c promoter.
  • the hybrid promoter consists of the upstream part of the truncated actin 5c promoter (minus the Actin 5c core promoter), and the HSP70 core promoter.
  • Fig. 11 Vector map for RANKL containing pHP34s-hybrid-hSAR-FR.
  • the hSAR or HSP70 Matrix attachment regions were inserted in the forward and reverse orientation, flanking the expression cassette.
  • the hSAR elements where also inserted in the same positions in the three other possible orientations (reverse - reverse; reverse-forward, forward-forward).
  • Fig. 13 RANKL expression level of pHP34s-Hybrid (named: Hybrid) and pHP34s-Hybrid.i (containing the intron, named: Hybrid_RNA+), compared to two commercially available vectors. (See table Al for RAW data).
  • heterologous expression refers to the expression of a polypeptide not normally expressed and secreted by the host cell used to express that particular polypeptide.
  • Promoter DNA polynucleotide means a nucleotide sequence that provides a cell with the regulatory sequences for expression of a coding sequence operably linked thereto. In general, a coding sequence is located 3' to a promoter sequence.
  • the promoter DNA polynucleotide may consists of proximal and more distal upstream elements as well as other functional fragments or elements, the latter elements often referred to as enhancers.
  • the terms “functional fragment”, “elements” and “enhancers” refers to DNA sequences and parts of the promoter, which can stimulate promoter activity and may be an innate element of the promoter or a heterologous element inserted to enhance the level or tissue-specificity of a promoter. It is understood by those skilled in the art that different promoters may direct the expression of a gene in different tissues or cell types, or at different stages of development, or in response to different environmental conditions. An unregulated promoter that allows for continual transcription of its associated gene is often referred to as “constitutive promoter”.
  • SEQ ID NO: 1 a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus.
  • the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 37. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 68. In specific embodiments the sequence identity in each of these cases is at least 85%, such as at least 90%, such as at least 95%, such as at least 98%.
  • the promoter DNA polynucleotide according to the invention comprises a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37 or SEQ ID NO: 68, said functional nucleotide sequence having promoter activity in a Drosophila S2 cell.
  • the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 1. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:2. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 3.
  • the promoter DNA polynucleotide according to the invention comprises a chimeric nucleotide sequence as defined in (vi) above.
  • the functional fragment of at least 20 contiguous nucleotides according to the invention is not more than 999 contiguous nucleotides, such as not more than 998, such as not more than 997, such as not more than 996, such as not more than 995, such as not more than 994, such as not more than 993, such as not more than 992, such as not more than 991, such as not more than 990, such as not more than 989, such as not more than 988, such as not more than 987, such as not more than 986, such as not more than 985, such as not more than 984, such as not more than 983, such as not more than 982, such as not more than 981, such as not more than 980, such as not more than 979, such as not more than 978, such as not more than 977, such as not more than 976, such as not more than 975, such as not more than 974, such as not more than 973, such as not more than 972, such as not more than 999 con
  • the isolated DNA polynucleotide according to the invention further comprises a second promoter DNA polynucleotide suitable to drive the expression of the selection marker in an insect cell.
  • this second promoter is selected from the group consisting of (i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37; (ii) a nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
  • the isolated DNA polynucleotide according to the invention further comprises one or more ubiquitous chromatin opening element upstream and/or downstream relative to the a multiple cloning site.
  • the isolated DNA polynucleotide according to the invention further comprises an E.coli origin.
  • the isolated DNA polynucleotide according to the invention further comprises at least one protein export signal polynucleotide sequence, such as one selected from the list consisting of BIP and CPY.
  • the isolated DNA polynucleotide according to the invention is essentially free of viral DNA.
  • the isolated DNA polynucleotide according to the invention further comprises at least one 72bp elements from SV40. In some embodiments the isolated DNA polynucleotide according to the invention further comprises two 72bp elements from SV40. In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one 72bp elements from SV40 upstream of the promoter and at least one 72bp elements from SV40 downstream of the promoter.
  • the isolated DNA polynucleotide according to the invention further comprises at least one PRE element from Hepatitis B virus.
  • the PRE element from Hepatitis B virus is according to SEQ ID NO:40, such as nucleotides 10 to 574 of SEQ ID NO:40.
  • the isolated DNA polynucleotide according to the invention further comprises at least one Ori-beta element.
  • the isolated DNA polynucleotide according to the invention further comprises at least one matrix attachment region (MAR) element.
  • MAR matrix attachment region
  • the promoter DNA polynucleotide sequence according to the invention controls the expression of a gene or other DNA sequence to which it is linked.
  • the isolated DNA polynucleotide according to the invention further comprises at least one polynucleotide sequence encoding a polypeptide heterologous to the promoter DNA polynucleotide sequence.
  • the isolated DNA polynucleotide according to the invention is an expression vector.
  • One aspect relates to a cell comprising the isolated DNA polynucleotide according to the invention.
  • the cell is an insect cell.
  • the cell is a Drosophila melanogaster cell.
  • the cell is a Drosophila melanogaster S2 cell.
  • the cell comprising the isolated DNA polynucleotide according to the invention is stably transfected with said isolated DNA polynucleotide.
  • a "cloning vector” means a plasmid DNA which can be used to insert a DNA fragment of interest into a host cell, normally in order to produce multiple copies of the fragment and hence the vector.
  • "Expression vector” means a plasmid or viral DNA containing necessary regulatory signals for the synthesis of mRNA derived from gene sequences, which can be inserted into the vector. The gene sequences being e.g. a chimeric polynucleotide as defined above.
  • a “protein export signal polynucleotide sequence” refers to a sequence that directs or facilitates the translocation of an expressed protein across the membrane of the host expression cell.
  • a “protein export signal polynucleotide sequence” may be present in the N-terminus of a precursor polypeptide (a pre-peptide or pre-pro-peptide) to directs its translocation across a membrane.
  • a precursor polypeptide is processed by cleavage of the signal sequence to generate a mature peptide or a pro-peptide. If the product of off- cleavage of the signal peptide is a pro-peptide, the mature peptide is the product of subsequent post-translational modifications that involve further removal of amino acids.
  • matrix attachment region or "MAR” or “Scaffold/matrix attachment region” as used herein refers to a nucleotide sequence in the DNA of eukaryotic chromosomes where the nuclear matrix attaches. MARs mediate structural organization of the chromatin within the nucleus. These elements constitute anchor points of the DNA for the chromatin scaffold and serve to organize the chromatin into structural domains. Studies on individual genes led to the conclusion that the dynamic and complex organization of the chromatin mediated by S/MAR elements plays an important role in the regulation of gene expression.
  • amplification control element or “Ace” as used herein refers to an element, which is involved in initiating amplification of DNA from the replication origin.
  • ACE3 320-bp amplification control element
  • AERs amplification enhancing regions
  • the PCR product is purified to remove dNTPs (and original plasmid if it was used as template) and then treated with T4 DNA polymerase in the presence of the appropriate dNTP to generate the specific vector-compatible overhangs.
  • the annealed LIC vector and insert are transformed into competent E. coli cells. Covalent bond formation at the vector insert junctions occurs within the cell to yield circular plasmid.”
  • a ligation independent cloning cassette can be included.
  • a polynucleotide sequence according to the invention hybridizes under conditions of moderate stringency to a sequence selected from the group consisting of:
  • nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
  • Drosophila S2 cell (iv) a nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell;
  • step (c) transforming a host cell with the polynucleotide obtained under step (b);
  • a vial of Drosophila S2 cells from ATCC was resuscitated and expanded in tissue culture flasks.
  • a cell bank consisting of twenty vials containing 2xlO 7 Drosophila S2 cells in 1 mL freeze medium (Excell420 + 50% FBS + 10% DMSO) was established and stored at -80 0 C.
  • pHP15a (p2270, strain MR#3080)
  • the resulting fragment of 362 bp was digested with restrictions endonucleases Nhel and HindIII and cloned into Nhel and HindIII digested and SAP treated p2263. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
  • pHP18-Afl II (p2288, strain MR#3098)
  • the vectort was constructed by SOE-PCR. First PCRl fragment was made with primers 987 and 4038 using p2277as template. The second PCR2 fragment was made with primers 4037 and 986 using p2277 as template. The fragment have the size of 224 bp.
  • transfection cells After transfection cells are allowed to grow and produce at 23 0 C for 2 to 4 days before a sample is taken for cell number, protein-of-interest and total protein determination. No selection agent should be added during transient transfections.
  • the first class comprises vectors with different variants of the actin5C promoter driving protein expression; the second class refers to vectors employing the HSP70 promoter, while the third involves hybrid actin5C/HSP70 promoters.
  • the first promoter was the full-length HSP70 promoter (457bp, vector pHP 1.3), while the second was a truncated version of HSP70 (59bp to 342bp, see sequences section, vector pHP12).
  • the truncated version was found to have up to five-fold higher protein expression levels compared to the full-length promoter (see figure 2). It was also observed that the tuncated HSP70 promoter was expressed at high level in stable as well as transient cell lines (see figures 3 and 4).
  • markers were included to allow for greater flexibility in the application of the vectors.
  • the following markers are included: Zeocin, neomycin and blasticidin.
  • the remaining vectors were transfected according to the standard procedure detailed above.
  • SEQ ID NO: 2 pHP12 Truncated HSP70 promoter (bold sequence corresponds to HSP70 CORE PROMOTER (SEQ ID NO:37)
  • SEQ ID NO: 3 pHPllb Actin5C mutant promoter from Nhel-Hindlll
  • SEQ ID NO: 35 pHP15c vector:
  • SEQ ID NO: 36 ACTIN 5C CORE PROMOTER FROM PHPlO CORRESPONDING TO NT 478 TO NT 572 OF SEQ ID NO:6:
  • SEQ ID NO: 39 The 72bp element sequence with Xbal and Notl restriction sites (boxed)
  • SEQ ID NO: 58 VECTOR PHP34S (CREATED FROM SYNTHETIC DNA):
  • SEQ ID NO: 60 INTRON (NAMED INTRN IN VECTOR MAPS) WITH SACI AND CCORI
  • SEQ ID NO: 72 Sequence pLJC-Int-Hisl (LJC enabled pHP34s-Hybrid for intracellular expression):

Abstract

.Disclosed is a DNA polynucleotide comprising a nucleic acid sequence having promoter activity in a Drosophila S2 cell, where said nucleic acid sequence is selected from (i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO: 37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i); (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii); (iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii); (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and (vi) a second chimeric nucleotide sequence, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell. Also disclosed are vectors and cells comprising the polynucleotide and a method for producing a polypeptide of interest by use of the polynucleotide.

Description

IMPROVED PROTEIN EXPRESSION SYSTEM
FIELD OF THE INVENTION
The present invention relates to the field of genetic engineering and molecular biology. In particular, the present invention relates to novel promoter DNA polynucleotides and its use as a tool for improved protein expression in host cells, notably in Drosophila melanogaster.
Furthermore, the present invention relates to vectors containing the polynucleotide and also the use of these in recombinant expression of polypeptides, in particular heterologous expression of proteins, such as industrial enzymes or proteins for pharmaceutical use including eukaryotic (e.g. mammalian, such as human, but also protozoan or helminthic) and viral proteins. The invention is particularly relevant in the field of protein expression where the expression product is secreted from recombinant host cells, especially if these host cells are insect cells.
BACKGROUND OF THE INVENTION
Protein production systems, in which polypeptides or proteins of interest are produced in recombinant organisms or cells, are the backbone of commercial biotechnology. The earliest systems, based on bacterial expression in hosts such as E. coli, have been joined by systems based on eukaryotic hosts, in particular mammalian cells in culture, insect cells both in culture and in the form of whole insects, and transgenic mammals such as sheep and goats.
Prokaryotic cell culture systems are easy to maintain and cheap to operate. However, prokaryotic cells are not capable of post-translational modification of eukaryotic proteins.
Moreover, many proteins are incorrectly folded, requiring specific procedures to refold them, which adds to the cost of production.
Eukaryotic cell culture systems have been described for a number of applications. For example, mammalian cells are capable of post-translational modification, and generally produce proteins which are correctly folded and soluble. The chief disadvantages of mammalian cell systems include the requirement for specialised and expensive culture facilities, the risk of infection, which can lead to loss of the whole culture, and the risk of contaminating the end product with potentially hazardous mammalian proteins.
Insect cells are also used for polypeptide expression. The most widespread expression system used in insect cells is based on baculovirus vectors. A baculovirus expression vector is constructed by replacing the polyhedrin gene of baculovirus, which encodes a major structural protein of the baculovirus, with a heterologous gene, under the control of the strong native polyhedrin promoter. Cultured insect host cells are infected with the recombinant virus, and the protein produced thereby can be recovered from the cells themselves or from the culture medium if suitable secretion signals are employed. These systems also, however, suffer from problems associated with reproducibility of expression level and quality, infection of the culture, and may require specialised culture facilities. Furthermore, baculovirus stocks, which for the production of certain proteins may have to be made under GMP conditions, is not always stable over time.
Suitable promoters used in Drosophila melanogaster S2 cells for protein expression also include the pMT promoter and the P2ZOp2F (0PIE2 promoter)
Chung et al. Molecular and Cellular Biology, Vol. 10, No. 12, 1992 relates to characterization of positive and negative regulatory elements in the Actin5C distal promoter.
Angelichio βt al. Nucleic Acids Research, Vol. 19, No. 18 5037-5043, 1991 relates to a comparison of several promoters and polyadenylation signals for use in heterologous gene expression in cultured Drosophila cells.
It is an object of the present invention to provide more efficient expression and/or secretion in host cells, notably in Drosophila melanogaster. It is a further object to provide polynucleotides and vectors that facilitate this efficient expression and secretion.
SUMMARY OF THE INVENTION
In a broad aspect the present invention relates to promoter DNA polynucleotides, suitable for use in the heterologous expression of a polypeptide of interest. In another broad aspect the present invention relates to an isolated DNA polynucleotide, a so-called expression vector, comprising such promoter DNA polynucleotides suitable for expression and production in relatively high amounts of a protein of interest, such as therapeutically effective proteins or industrial enzymes.
Thus, in a first aspect the present invention relates to a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37 or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and (vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
In a second aspect the present invention relates to an isolated DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell the DNA polynucleotide comprising
a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID
NO: 68 with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
(vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell. In a third aspect the present invention relates to a cell comprising a DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell the DNA, the polynucleotide comprising a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4,
SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
(vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
In a further aspect the present invention relates to a method for the production of a polypeptide of interest encoded by a polynucleotide the method comprising the steps of
(a) obtaining a polynucleotide sequence encoding the polypeptide of interest;
(b) inserting the polynucleotide sequence encoding the polypeptide of interest into a DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell, the polynucleotide comprising a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus;
(ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell; (iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and (vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell;
(c) transforming a host cell with the polynucleotide obtained under step (b); (d) allowing for the expression of the polynucleotide obtained under step (b) to produce the polypeptide; and
(e) obtaining the polypeptide there from.
In a further aspect the present invention relates to a polypeptide produced by a method comprising the steps of
(a) obtaining a polynucleotide sequence encoding the polypeptide of interest;
(b) inserting the polynucleotide sequence encoding the polypeptide of interest into a DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell, the polynucleotide comprising a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of: (i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4,
SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
(vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell;
(c) transforming a host cell with the polynucleotide obtained under step (b); (d) allowing for the expression of the polynucleotide obtained under step (b) to produce the polypeptide; and
(e) obtaining the polypeptide there from.
BRIEF DESCRIPTION OF FIGURES
Fig. 1 : Normalized protein expression level compared to the pOPIE2 promoter in the p2ZOP2F vector for different transfections of a mutant Actin5C promoter for stable and transient transformations. (b)..(d) refers to separate transfections using the mutant Actin5C promoter containing plasmid pHPll.
Fig. 2: Expression level of the full-length and truncated HSP70 promoter during transient expression. pOPIE2 was used as control in the experiment.
Fig. 3: RANKL production level for stable cell lines using six different promoters to drive protein expression. These include three versions of the mutated Actin5C promoter (the full- length promoter, (2) a truncated version (vector pHP17) and (3) the 612bp shortest truncation version), two versions of the HSP70 promoter (the truncated HSP70 promoter and the HSP70 core promoter) and the pOPIE2 promoter as control.
Fig. 4: Normalized expression levels achieved during transient transfection. These include three versions of the mutated Actin5C promoter (the full-length promoter, (2) a truncated version (vector pHP17) and (3) the 612bp shortest truncation version), the truncated HSP70 promoter and the pOPIE2 promoter as control.
Fig. 5: Expression levels in transient transfection of pOPIE2 and the Actin5C core and HSP70 core promoters.
Fig. 6 illustrates one suitable vector, pHP15c_su(hw) vector, according to the invention
Fig. 7 illustrates one suitable vector, pHP15c vector, according to the invention.
Fig. 8: Comparison of the expression levels of the Actin-HSP70 core hybrid promoter and the truncated Actin 5c promoter (named Promoter pl_var 2 in graph). Duplicate transient expression experiments. (See table A3 for raw data).
Fig. 9: Effect of adding either the intron or two flanking matrix attachment regions to the pHP34s-hybrid vector. The experiments were conducted as triplicate shake flask experiments using stable polyclonal cell lines made from independent triplicate transfections. (See table A2 for raw data).
Fig. 10: Vector maps.
(A) Vector map for pHP34s-hybrid vector containing a RANKL encoding region. (B) The original pHP34s vector containing the truncated actin 5c promoter. The hybrid promoter consists of the upstream part of the truncated actin 5c promoter (minus the Actin 5c core promoter), and the HSP70 core promoter.
Fig. 11: Vector map for RANKL containing pHP34s-hybrid-hSAR-FR. The hSAR or HSP70 Matrix attachment regions were inserted in the forward and reverse orientation, flanking the expression cassette. The hSAR elements where also inserted in the same positions in the three other possible orientations (reverse - reverse; reverse-forward, forward-forward).
Fig. 12: Vector map for pHP34s-hybrid.i containing a coding sequence for the RANKL protein. The "i" indicates the insertion of an intron upstream of the ATG start codon. The intron is indicated as "intrn" in the vector map.
Fig. 13: RANKL expression level of pHP34s-Hybrid (named: Hybrid) and pHP34s-Hybrid.i (containing the intron, named: Hybrid_RNA+), compared to two commercially available vectors. (See table Al for RAW data).
Fig. 14: LIC enabled pHP34s-Hybrid for C-terminally His tagged extracellular expression using the BIP signal sequence. The SacB gene confers sucrose sensitivity to E. coli cells. The SacB gene should be removed during LIC cloning by restriction digest and replaced with the gene- of-interest. If the SacB gene is not replaced it acts as a counter selection marker to remove background (incorrect) colonies. The LIC sites are indicated as 5' LIC and LIC3-CTHF. This particular vector has the sequence set forth in SEQ ID NO: 69. SEQ ID NOs. 69-73 show similar vectors where N- or C- terminal His tagging with or without a TEV protease site is enabled, so as to allow intra- or extracellular expression.
DETAILED DISCRETION OF THE INVENTION
As discussed above the inventors of the present invention have found particular highly efficient promoters as well as regulatory elements and their combination suitable for the high level expression of heterologous proteins in insect cells. A "heterologous expression" as used herein refers to the expression of a polypeptide not normally expressed and secreted by the host cell used to express that particular polypeptide. The term "Promoter DNA polynucleotide" as used herein means a nucleotide sequence that provides a cell with the regulatory sequences for expression of a coding sequence operably linked thereto. In general, a coding sequence is located 3' to a promoter sequence. The promoter DNA polynucleotide may consists of proximal and more distal upstream elements as well as other functional fragments or elements, the latter elements often referred to as enhancers.
As used herein the terms "functional fragment", "elements" and "enhancers" refers to DNA sequences and parts of the promoter, which can stimulate promoter activity and may be an innate element of the promoter or a heterologous element inserted to enhance the level or tissue-specificity of a promoter. It is understood by those skilled in the art that different promoters may direct the expression of a gene in different tissues or cell types, or at different stages of development, or in response to different environmental conditions. An unregulated promoter that allows for continual transcription of its associated gene is often referred to as "constitutive promoter".
Unless otherwise stated the term "Sequence identity" for nucleic acids as used herein refers to the sequence identity calculated as (nref - ndlf)-100/nref, wherein ndlf is the total number of non-identical residues in the two sequences when aligned and wherein nref is the number of residues in one of the sequences. Hence, the DNA sequence agtcagtc will have a sequence identity of 75% with the sequence aatcaatc (ndlf=2 and nref=8).
In some embodiments the sequence identity is determined by conventional methods, e.g., Smith and Waterman, 1981, Adv. Appl. Math. 2:482, by the search for similarity method of Pearson & Lipman, 1988, Proc. Natl. Acad. Sci. USA 85: 2444, using the CLUSTAL W algorithm of Thompson et al., 1994, Nucleic Acids Res 22:467380, by computerized implementations of these algorithms (GAP, BESTFIT, FASTA, and TFASTA in the Wisconsin Genetics Software Package, Genetics Computer Group). The BLAST algorithm (Altschul et al., 1990, MoI. Biol. 215:403-10) for which software may be obtained through the National Center for Biotechnology Information www.ncbi.nlm.nih.gov/) may also be used. When using any of the aforementioned algorithms, the default parameters for "Window" length, gap penalty, etc., are used.
A "chimeric nucleotide sequence" as used herein refers to a nucleotide sequence consisting of a first nucleotide sequence derived from a first original nucleotide sequence fused to a second nucleotide sequence derived from a second original nucleotide sequence, which first and second original sequence are not normally fused to each other in the same sequence. When indicating that a first polynucleotide exhibits an improved/higher "protein expression level" compared to a second polynucleotide is herein meant that the first polynucleotide provides for a larger amount of recoverable protein expression product than does the second polynucleotide when transforming and culturing a reference cell (typically an insect cell, such as a Drosophila S2 cell) with the polynucleotides so as to obtain expression of the polynucleotides under identical conditions.
An "S2 cell" refers to a cell from the Schneider-2 embryonic Drosophila melanogaster cell line, which is i.a. available from DSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstraβe 7 B, 38124 Braunschweig, Germany under the deposit number DSMZ ACC 130 and from American Type Culture Collection (ATCC), P.O. Box 1549, Manassas, VA 20108, USA, under the deposit number CRL-1963.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence selected from the group consisting of:
a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus.
In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO: 1. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:2. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:3. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:4. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO: 5. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO: 6. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:33. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:36. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO:37. In some embodiments the promoter DNA polynucleotide comprises a nucleotide sequence of SEQ ID NO: 68, optionally lacking residues 1 or 1-2 or 1-3 or 1-4 or 1-5 or 1-6 and/or optionally lacking residues 587-592 or 588-592 or 589-592 or 590-592 or 591-592 or 592.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68.. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37 or SEQ ID NO: 68 said functional nucleotide sequence having promoter activity in a Drosophila S2 cell.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 1. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO:2. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO:3. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO:4. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO:5. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO:6. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 33. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 36. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 37. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the sequence of SEQ ID NO: 68. In specific embodiments the sequence identity in each of these cases is at least 85%, such as at least 90%, such as at least 95%, such as at least 98%.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37, or SEQ ID NO: 68 said functional fragment having promoter activity in a Drosophila S2 cell. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 1. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 2. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 3. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:4. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 5. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 6. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 33. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 36. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 39. In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 68.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37 or SEQ ID NO: 68.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37 or SEQ ID NO: 68, said functional nucleotide sequence having promoter activity in a Drosophila S2 cell.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 1. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:2. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 3. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:4. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 5. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 6. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:33. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO:36. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 37. In some embodiments the promoter DNA polynucleotide according to the invention comprises a sequence with a sequence identity of at least 80% to the functional fragment of at least 6 contiguous nucleotides of the sequence of SEQ ID NO: 68.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a chimeric sequence comprising two or more sequences selected from the following group
a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37;
a sequence with a sequence identity of at least 80% to any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37;
a functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37; a sequence with a sequence identity of at least 80% to a functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 33, SEQ ID NO: 36, or SEQ ID NO: 37.
An example of such a chimeric sequence is the hybrid promoter sequence set forth in SEQ ID NO: 68.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a chimeric nucleotide sequence comprising two or more sequences selected from
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO:4,
SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 33, SEQ ID NO: 36, or SEQ ID NO: 37; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell;
(iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
Drosophila S2 cell; and (iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell.
In some embodiments the promoter DNA polynucleotide according to the invention comprises a chimeric nucleotide sequence as defined in (vi) above.
In some embodiments the functional fragment of at least 6 contiguous nucleotides according to the invention is at least 7, such as at least 8, such as at least 9, such as at least 10, such as at least 11, such as at least 12, such as at least 13, such as at least 14, such as at least 15, such as at least 16, such as at least 17, such as at least 18, such as at least 19, such as at least 20, such as at least 21, such as at least 22, such as at least 23, such as at least 24, such as at least 25, such as at least 26, such as at least 27, such as at least 28, such as at least 29, such as at least 30, such as at least 31, such as at least 32, such as at least 33, such as at least 34, such as at least 35, such as at least 36, such as at least 37, such as at least 38, such as at least 39, such as at least 40, such as at least 41, such as at least 42, such as at least 43, such as at least 44, such as at least 45, such as at least 46, such as at least 47, such as at least 48, such as at least 49, such as at least 50, such as at least 51, such as at least 52, such as at least 53, such as at least 54, such as at least 55, such as at least 56, such as at least 57, such as at least 58, such as at least 59, such as at least 60, such as at least 61, such as at least 62, such as at least 63, such as at least 64, such as at least 65, such as at least 66, such as at least 67, such as at least 68, such as at least 69, such as at least 70, such as at least 71, such as at least 72, such as at least 73, such as at least 74, such as at least 75, such as at least 76, such as at least 77, such as at least 78, such as at least 79, such as at least 80, such as at least 81, such as at least 82, such as at least 83, such as at least 84, such as at least 85, such as at least 86, such as at least 87, such as at least 88, such as at least 89, such as at least 90, such as at least 91, such as at least 92, such as at least 93, such as at least 94, such as at least 95, such as at least 96, such as at least 97, such as at least 98, such as at least 99, such as at least 100, such as at least 101, such as at least 102, such as at least 103, such as at least 104, such as at least 105, such as at least 106, such as at least 107, such as at least 108, such as at least 109, such as at least 110, such as at least 111, such as at least 112, such as at least 113, such as at least 114, such as at least 115, such as at least 116, such as at least 117, such as at least 118, such as at least 119, such as at least 120, such as at least 121, such as at least 122, such as at least 123, such as at least 124, such as at least 125, such as at least 126, such as at least 127, such as at least 128, such as at least 129, such as at least 130, such as at least 131, such as at least 132, such as at least 133, such as at least 134, such as at least 135, such as at least 136, such as at least 137, such as at least 138, such as at least 139, such as at least 140, such as at least 141, such as at least 142, such as at least 143, such as at least 144, such as at least 145, such as at least 146, such as at least 147, such as at least 148, such as at least 149, such as at least 150, such as at least 151, such as at least 152, such as at least 153, such as at least 154, such as at least 155, such as at least 156, such as at least 157, such as at least 158, such as at least 159, such as at least 160, such as at least 161, such as at least 162, such as at least 163, such as at least 164, such as at least 165, such as at least 166, such as at least 167, such as at least 168, such as at least 169, such as at least 170, such as at least 171, such as at least 172, such as at least 173, such as at least 174, such as at least 175, such as at least 176, such as at least 177, such as at least 178, such as at least 179, such as at least 180, such as at least 181, such as at least 182, such as at least 183, such as at least 184, such as at least 185, such as at least 186, such as at least 187, such as at least 188, such as at least 189, such as at least 190, such as at least 191, such as at least 192, such as at least 193, such as at least 194, such as at least 195, such as at least 196, such as at least 197, such as at least 198, such as at least 199, such as at least 200, such as at least 201, such as at least 202, such as at least 203, such as at least 204, such as at least 205, such as at least 206, such as at least 207, such as at least 208, such as at least 209, such as at least 210, such as at least 211, such as at least 212, such as at least 213, such as at least 214, such as at least 215, such as at least 216, such as at least 217, such as at least 218, such as at least 219, such as at least 220, such as at least 221, such as at least 222, such as at least 223, such as at least 224, such as at least 225, such as at least 226, such as at least 227, such as at least 228, such as at least 229, such as at least 230, such as at least 231, such as at least 232, such as at least 233, such as at least 234, such as at least 235, such as at least 236, such as at least 237, such as at least 238, such as at least 239, such as at least 240, such as at least 241, such as at least 242, such as at least 243, such as at least 244, such as at least 245, such as at least 246, such as at least 247, such as at least 248, such as at least 249, such as at least 250, such as at least 251, such as at least 252, such as at least 253, such as at least 254, such as at least 255, such as at least 256, such as at least 257, such as at least 258, such as at least 259, such as at least 260, such as at least 261, such as at least 262, such as at least 263, such as at least 264, such as at least 265, such as at least 266, such as at least 267, such as at least 268, such as at least 269, such as at least 270, such as at least 271, such as at least 272,, such as at least 273, such as at least 274, such as at least 275, such as at least 276, such as at least 277, such as at least 278, such as at least 279, such as at least 280, such as at least 281, such as at least 282, such as at least 283, such as at least 284, such as at least 285, such as at least 286, such as at least 287, such as at least 288, such as at least 289, such as at least 290, such as at least 291, such as at least 292, such as at least 293, such as at least 294, such as at least 295, such as at least 296, such as at least 297, such as at least 298, such as at least 299, such as at least 300, such as at least 301, such as at least 302, such as at least 303, such as at least 304, such as at least 305, such as at least 306, such as at least 307, such as at least 308, such as at least 309, such as at least 310, such as at least 311, such as at least 312, such as at least 313, such as at least 314, such as at least 315, such as at least 316, such as at least 317, such as at least 318, such as at least 319, such as at least 320, such as at least 321, such as at least 322, such as at least 323, such as at least 324, such as at least 325, such as at least 326, such as at least 327, such as at least 328, such as at least 329, such as at least 330, such as at least 331, such as at least 332, such as at least 333, such as at least 334, such as at least 335, such as at least 336, such as at least 337, such as at least 338, such as at least 339, such as at least 340, such as at least 341, such as at least 342, such as at least 343, such as at least 344, such as at least 345, such as at least 346, such as at least 347, such as at least 348, such as at least 349, such as at least 350, such as at least 351, such as at least 352, such as at least 353, such as at least 354, such as at least 355, such as at least 356, such as at least 357, such as at least 358, such as at least 359, such as at least 360, such as at least 361, such as at least 362, such as at least 363, such as at least 364, such as at least 365, such as at least 366, such as at least 367, such as at least 368, such as at least 369, such as at least 370, such as at least 371, such as at least 372, such as at least 373, such as at least 374, such as at least 375, such as at least 376, such as at least 377, such as at least 378, such as at least 379, such as at least 380, such as at least 381, such as at least 382, such as at least 383, such as at least 384, such as at least 385, such as at least 386, such as at least 387, such as at least 388, such as at least 389, such as at least 390, such as at least 391, such as at least 392, such as at least 393, such as at least 394, such as at least 395, such as at least 396, such as at least 397, such as at least 398, such as at least 399, such as at least 400, such as at least 401, such as at least 402, such as at least 403, such as at least 404, such as at least 405, such as at least 406, such as at least 407, such as at least 408, such as at least 409, such as at least 410, such as at least 411, such as at least 412, such as at least 413, such as at least 414, such as at least 415, such as at least 416, such as at least 417, such as at least 418, such as at least 419, such as at least 420, such as at least 421, such as at least 422, such as at least 423, such as at least 424, such as at least 425, such as at least 426, such as at least 427, such as at least 428, such as at least 429, such as at least 430, such as at least 431, such as at least 432, such as at least 433, such as at least 434, such as at least 435, such as at least 436, such as at least 437, such as at least 438, such as at least 439, such as at least 440, such as at least 441, such as at least 442, such as at least 443, such as at least 444, such as at least 445, such as at least 446, such as at least 447, such as at least 448, such as at least 449, such as at least 450, such as at least 451, such as at least 452, such as at least 453, such as at least 454, such as at least 455, such as at least 456, such as at least 457, such as at least 458, such as at least 459, such as at least 460, such as at least 461, such as at least 462, such as at least 463, such as at least 464, such as at least 465, such as at least 466, such as at least 467, such as at least 468, such as at least 469, such as at least 470, such as at least 471, such as at least 472, such as at least 473, such as at least 474, such as at least 475, such as at least 476, such as at least 477, such as at least 478, such as at least 479, such as at least 480, such as at least 481, such as at least 482, such as at least 483, such as at least 484, such as at least 485, such as at least 486, such as at least 487, such as at least 488, such as at least 489, such as at least 490, such as at least 491, such as at least 492, such as at least 493, such as at least 494, such as at least 495, such as at least 496, such as at least 497, such as at least 498, such as at least 499, such as at least 500, such as at least 501, such as at least 502, such as at least 503, such as at least 504, such as at least 505, such as at least 506, such as at least 507, such as at least 508, such as at least 509, such as at least 510, such as at least 511, such as at least 512, such as at least 513, such as at least 514, such as at least 515, such as at least 516, such as at least 517, such as at least 518, such as at least 519, such as at least 520, such as at least 521, such as at least 522, such as at least 523, such as at least 524, such as at least 525, such as at least 526, such as at least 527, such as at least 528, such as at least 529, such as at least 530, such as at least 531, such as at least 532, such as at least 533, such as at least 534, such as at least 535, such as at least 536, such as at least 537, such as at least 538, such as at least 539, such as at least 540, such as at least 541, such as at least 542, such as at least 543, such as at least 544, such as at least 545, such as at least 546, such as at least 547, such as at least 548, such as at least 549, such as at least 550, such as at least 551, such as at least 552, such as at least 553, such as at least 554, such as at least 555, such as at least 556, such as at least 557, such as at least 558, such as at least 559, such as at least 560, such as at least 561, such as at least 562, such as at least 563, such as at least 564, such as at least 565, such as at least 566, such as at least 567, such as at least 568, such as at least 569, such as at least 570, such as at least 571, such as at least 572, such as at least 573, such as at least 574, such as at least 575, such as at least 576, such as at least 577, such as at least 578, such as at least 579, such as at least 580, such as at least 581, such as at least 582, such as at least 583, such as at least 584, such as at least 585, such as at least 586, such as at least 587, such as at least 588, such as at least 589, such as at least 590, such as at least 591 contiguous nucleotides.
In some embodiments the functional fragment of at least 20 contiguous nucleotides according to the invention is not more than 999 contiguous nucleotides, such as not more than 998, such as not more than 997, such as not more than 996, such as not more than 995, such as not more than 994, such as not more than 993, such as not more than 992, such as not more than 991, such as not more than 990, such as not more than 989, such as not more than 988, such as not more than 987, such as not more than 986, such as not more than 985, such as not more than 984, such as not more than 983, such as not more than 982, such as not more than 981, such as not more than 980, such as not more than 979, such as not more than 978, such as not more than 977, such as not more than 976, such as not more than 975, such as not more than 974, such as not more than 973, such as not more than 972, such as not more than 971, such as not more than 970, such as not more than 969, such as not more than 968, such as not more than 967, such as not more than 966, such as not more than 965, such as not more than 964, such as not more than 963, such as not more than 962, such as not more than 961, such as not more than 960, such as not more than 959, such as not more than 958, such as not more than 957, such as not more than 956, such as not more than 955, such as not more than 954, such as not more than 953, such as not more than 952, such as not more than 951, such as not more than 950, such as not more than 949, such as not more than 948, such as not more than 947, such as not more than 946, such as not more than 945, such as not more than 944, such as not more than 943, such as not more than 942, such as not more than 941, such as not more than 940, such as not more than 939, such as not more than 938, such as not more than 937, such as not more than 936, such as not more than 935, such as not more than 934, such as not more than 933, such as not more than 932, such as not more than 931, such as not more than 930, such as not more than 929, such as not more than 928, such as not more than 927, such as not more than 926, such as not more than 925, such as not more than 924, such as not more than 923, such as not more than 922, such as not more than 921, such as not more than 920, such as not more than 919, such as not more than 918, such as not more than 917, such as not more than 916, such as not more than 915, such as not more than 914, such as not more than 913, such as not more than 912, such as not more than 911, such as not more than 910, such as not more than 909, such as not more than 908, such as not more than 907, such as not more than 906, such as not more than 905, such as not more than 904, such as not more than 903, such as not more than 902, such as not more than 901, such as not more than 900, such as not more than 899, such as not more than 898, such as not more than 897, such as not more than 896, such as not more than 895, such as not more than 894, such as not more than 893, such as not more than 892, such as not more than 891, such as not more than 890, such as not more than 889, such as not more than 888, such as not more than 887, such as not more than 886, such as not more than 885, such as not more than 884, such as not more than 883, such as not more than 882, such as not more than 881, such as not more than 880, such as not more than 879, such as not more than 878, such as not more than 877, such as not more than 876, such as not more than 875, such as not more than 874, such as not more than 873, such as not more than 872, such as not more than 871, such as not more than 870, such as not more than 869, such as not more than 868, such as not more than 867, such as not more than 866, such as not more than 865, such as not more than 864, such as not more than 863, such as not more than 862, such as not more than 861, such as not more than 860, such as not more than 859, such as not more than 858, such as not more than 857, such as not more than 856, such as not more than 855, such as not more than 854, such as not more than 853, such as not more than 852, such as not more than 851, such as not more than 850, such as not more than 849, such as not more than 848, such as not more than 847, such as not more than 846, such as not more than 845, such as not more than 844, such as not more than 843, such as not more than 842, such as not more than 841, such as not more than 840, such as not more than 839, such as not more than 838, such as not more than 837, such as not more than 836, such as not more than 835, such as not more than 834, such as not more than 833, such as not more than 832, such as not more than 831, such as not more than 830, such as not more than 829, such as not more than 828, such as not more than 827, such as not more than 826, such as not more than 825, such as not more than 824, such as not more than 823, such as not more than 822, such as not more than 821, such as not more than 820, such as not more than 819, such as not more than 818, such as not more than 817, such as not more than 816, such as not more than 815, such as not more than 814, such as not more than 813, such as not more than 812, such as not more than 811, such as not more than 810, such as not more than 809, such as not more than 808, such as not more than 807, such as not more than 806, such as not more than 805, such as not more than 804, such as not more than 803, such as not more than 802, such as not more than 801, such as not more than 800, such as not more than 799, such as not more than 798, such as not more than 797, such as not more than 796, such as not more than 795, such as not more than 794, such as not more than 793, such as not more than 792, such as not more than 791, such as not more than 790, such as not more than 789, such as not more than 788, such as not more than 787, such as not more than 786, such as not more than 785, such as not more than 784, such as not more than 783, such as not more than 782, such as not more than 781, such as not more than 780, such as not more than 779, such as not more than 778, such as not more than 777, such as not more than 776, such as not more than 775, such as not more than 774, such as not more than 773, such as not more than 772, such as not more than 771, such as not more than 770, such as not more than 769, such as not more than 768, such as not more than 767, such as not more than 766, such as not more than 765, such as not more than 764, such as not more than 763, such as not more than 762, such as not more than 761, such as not more than 760, such as not more than 759, such as not more than 758, such as not more than 757, such as not more than 756, such as not more than 755, such as not more than 754, such as not more than 753, such as not more than 752, such as not more than 751, such as not more than 750, such as not more than 749, such as not more than 748, such as not more than 747, such as not more than 746, such as not more than 745, such as not more than 744, such as not more than 743, such as not more than 742, such as not more than 741, such as not more than 740, such as not more than 739, such as not more than 738, such as not more than 737, such as not more than 736, such as not more than 735, such as not more than 734, such as not more than 733, such as not more than 732, such as not more than 731, such as not more than 730, such as not more than 729, such as not more than 728, such as not more than 727, such as not more than 726, such as not more than 725, such as not more than 724, such as not more than 723, such as not more than 722, such as not more than 721, such as not more than 720, such as not more than 719, such as not more than 718, such as not more than 717, such as not more than 716, such as not more than 715, such as not more than 714, such as not more than 713, such as not more than 712, such as not more than 711, such as not more than 710, such as not more than 709, such as not more than 708, such as not more than 707, such as not more than 706, such as not more than 705, such as not more than 704, such as not more than 703, such as not more than 702, such as not more than 701, such as not more than 700, such as not more than 699, such as not more than 698, such as not more than 697, such as not more than 696, such as not more than 695, such as not more than 694, such as not more than 693, such as not more than 692, such as not more than 691, such as not more than 690, such as not more than 689, such as not more than 688, such as not more than 687, such as not more than 686, such as not more than 685, such as not more than 684, such as not more than 683, such as not more than 682, such as not more than 681, such as not more than 680, such as not more than 679, such as not more than 678, such as not more than 677, such as not more than 676, such as not more than 675, such as not more than 674, such as not more than 673, such as not more than 672, such as not more than 671, such as not more than 670, such as not more than 669, such as not more than 668, such as not more than 667, such as not more than 666, such as not more than 665, such as not more than 664, such as not more than 663, such as not more than 662, such as not more than 661, such as not more than 660, such as not more than 659, such as not more than 658, such as not more than 657, such as not more than 656, such as not more than 655, such as not more than 654, such as not more than 653, such as not more than 652, such as not more than 651, such as not more than 650, such as not more than 649, such as not more than 648, such as not more than 647, such as not more than 646, such as not more than 645, such as not more than 644, such as not more than 643, such as not more than 642, such as not more than 641, such as not more than 640, such as not more than 639, such as not more than 638, such as not more than 637, such as not more than 636, such as not more than 635, such as not more than 634, such as not more than 633, such as not more than 632, such as not more than 631, such as not more than 630, such as not more than 629, such as not more than 628, such as not more than 627, such as not more than 626, such as not more than 625, such as not more than 624, such as not more than 623, such as not more than 622, such as not more than 621, such as not more than 620, such as not more than 619, such as not more than 618, such as not more than 617, such as not more than 616, such as not more than 615, such as not more than 614, such as not more than 613, such as not more than 612, such as not more than 611, such as not more than 610, such as not more than 609, such as not more than 608, such as not more than 607, such as not more than 606, such as not more than 605, such as not more than 604, such as not more than 603, such as not more than 602, such as not more than 601, such as not more than 600, such as not more than 599, such as not more than 598, such as not more than 597, such as not more than 596, such as not more than 595, such as not more than 594, such as not more than 593, such as not more than 592, such as not more than 591, such as not more than 590, such as not more than 589, such as not more than 588, such as not more than 587, such as not more than 586, such as not more than 585, such as not more than 584, such as not more than 583, such as not more than 582, such as not more than 581, such as not more than 580, such as not more than 579, such as not more than 578, such as not more than 577, such as not more than 576, such as not more than 575, such as not more than 574, such as not more than 573, such as not more than 572, such as not more than 571, such as not more than 570, such as not more than 569, such as not more than 568, such as not more than 567, such as not more than 566, such as not more than 565, such as not more than 564, such as not more than 563, such as not more than 562, such as not more than 561, such as not more than 560, such as not more than 559, such as not more than 558, such as not more than 557, such as not more than 556, such as not more than 555, such as not more than 554, such as not more than 553, such as not more than 552, such as not more than 551, such as not more than 550, such as not more than 549, such as not more than 548, such as not more than 547, such as not more than 546, such as not more than 545, such as not more than 544, such as not more than 543, such as not more than 542, such as not more than 541, such as not more than 540, such as not more than 539, such as not more than 538, such as not more than 537, such as not more than 536, such as not more than 535, such as not more than 534, such as not more than 533, such as not more than 532, such as not more than 531, such as not more than 530, such as not more than 529, such as not more than 528, such as not more than 527, such as not more than 526, such as not more than 525, such as not more than 524, such as not more than 523, such as not more than 522, such as not more than 521, such as not more than 520, such as not more than 519, such as not more than 518, such as not more than 517, such as not more than 516, such as not more than 515, such as not more than 514, such as not more than 513, such as not more than 512, such as not more than 511, such as not more than 510, such as not more than 509, such as not more than 508, such as not more than 507, such as not more than 506, such as not more than 505, such as not more than 504, such as not more than 503, such as not more than 502, such as not more than 501, such as not more than 500, such as not more than 499, such as not more than 498, such as not more than 497, such as not more than 496, such as not more than 495, such as not more than 494, such as not more than 493, such as not more than 492, such as not more than 491, such as not more than 490, such as not more than 489, such as not more than 488, such as not more than 487, such as not more than 486, such as not more than 485, such as not more than 484, such as not more than 483, such as not more than 482, such as not more than 481, such as not more than 480, such as not more than 479, such as not more than 478, such as not more than 477, such as not more than 476, such as not more than 475, such as not more than 474, such as not more than 473, such as not more than 472, such as not more than 471, such as not more than 470, such as not more than 469, such as not more than 468, such as not more than 467, such as not more than 466, such as not more than 465, such as not more than 464, such as not more than 463, such as not more than 462, such as not more than 461, such as not more than 460, such as not more than 459, such as not more than 458, such as not more than 457, such as not more than 456, such as not more than 455, such as not more than 454, such as not more than 453, such as not more than 452, such as not more than 451, such as not more than 450, such as not more than 449, such as not more than 448, such as not more than 447, such as not more than 446, such as not more than 445, such as not more than 444, such as not more than 443, such as not more than 442, such as not more than 441, such as not more than 440, such as not more than 439, such as not more than 438, such as not more than 437, such as not more than 436, such as not more than 435, such as not more than 434, such as not more than 433, such as not more than 432, such as not more than 431, such as not more than 430, such as not more than 429, such as not more than 428, such as not more than 427, such as not more than 426, such as not more than 425, such as not more than 424, such as not more than 423, such as not more than 422, such as not more than 421, such as not more than 420, such as not more than 419, such as not more than 418, such as not more than 417, such as not more than 416, such as not more than 415, such as not more than 414, such as not more than 413, such as not more than 412, such as not more than 411, such as not more than 410, such as not more than 409, such as not more than 408, such as not more than 407, such as not more than 406, such as not more than 405, such as not more than 404, such as not more than 403, such as not more than 402, such as not more than 401, such as not more than 400, such as not more than 399, such as not more than 398, such as not more than 397, such as not more than 396, such as not more than 395, such as not more than 394, such as not more than 393, such as not more than 392, such as not more than 391, such as not more than 390, such as not more than 389, such as not more than 388, such as not more than 387, such as not more than 386, such as not more than 385, such as not more than 384, such as not more than 383, such as not more than 382, such as not more than 381, such as not more than 380, such as not more than 379, such as not more than 378, such as not more than 377, such as not more than 376, such as not more than 375, such as not more than 374, such as not more than 373, such as not more than 372, such as not more than 371, such as not more than 370, such as not more than 369, such as not more than 368, such as not more than 367, such as not more than 366, such as not more than 365, such as not more than 364, such as not more than 363, such as not more than 362, such as not more than 361, such as not more than 360, such as not more than 359, such as not more than 358, such as not more than 357, such as not more than 356, such as not more than 355, such as not more than 354, such as not more than 353, such as not more than 352, such as not more than 351, such as not more than 350, such as not more than 349, such as not more than 348, such as not more than 347, such as not more than 346, such as not more than 345, such as not more than 344, such as not more than 343, such as not more than 342, such as not more than 341, such as not more than 340, such as not more than 339, such as not more than 338, such as not more than 337, such as not more than 336, such as not more than 335, such as not more than 334, such as not more than 333, such as not more than 332, such as not more than 331, such as not more than 330, such as not more than 329, such as not more than 328, such as not more than 327, such as not more than 326, such as not more than 325, such as not more than 324, such as not more than 323, such as not more than 322, such as not more than 321, such as not more than 320, such as not more than 319, such as not more than 318, such as not more than 317, such as not more than 316, such as not more than 315, such as not more than 314, such as not more than 313, such as not more than 312, such as not more than 311, such as not more than 310, such as not more than 309, such as not more than 308, such as not more than 307, such as not more than 306, such as not more than 305, such as not more than 304, such as not more than 303, such as not more than 302, such as not more than 301, such as not more than 300, such as not more than 299, such as not more than 298, such as not more than 297, such as not more than 296, such as not more than 295, such as not more than 294, such as not more than 293, such as not more than 292, such as not more than 291, such as not more than 290, such as not more than 289, such as not more than 288, such as not more than 287, such as not more than 286, such as not more than 285, such as not more than 284, such as not more than 283, such as not more than 282, such as not more than 281, such as not more than 280, such as not more than 279, such as not more than 278, such as not more than 277, such as not more than 276, such as not more than 275, such as not more than 274, such as not more than 273, such as not more than 272, such as not more than 271, such as not more than 270, such as not more than 269, such as not more than 268, such as not more than 267, such as not more than 266, such as not more than 265, such as not more than 264, such as not more than 263, such as not more than 262, such as not more than 261, such as not more than 260, such as not more than 259, such as not more than 258, such as not more than 257, such as not more than 256, such as not more than 255, such as not more than 254, such as not more than 253, such as not more than 252, such as not more than 251, such as not more than 250, such as not more than 249, such as not more than 248, such as not more than 247, such as not more than 246, such as not more than 245, such as not more than 244, such as not more than 243, such as not more than 242, such as not more than 241, such as not more than 240, such as not more than 239, such as not more than 238, such as not more than 237, such as not more than 236, such as not more than 235, such as not more than 234, such as not more than 233, such as not more than 232, such as not more than 231, such as not more than 230, such as not more than 229, such as not more than 228, such as not more than 227, such as not more than 226, such as not more than 225, such as not more than 224, such as not more than 223, such as not more than 222, such as not more than 221, such as not more than 220, such as not more than 219, such as not more than 218, such as not more than 217, such as not more than 216, such as not more than 215, such as not more than 214, such as not more than 213, such as not more than 212, such as not more than 211, such as not more than 210, such as not more than 209, such as not more than 208, such as not more than 207, such as not more than 206, such as not more than 205, such as not more than 204, such as not more than 203, such as not more than 202, such as not more than 201, such as not more than 200, such as not more than 199, such as not more than 198, such as not more than 197, such as not more than 196, such as not more than 195, such as not more than 194, such as not more than 193, such as not more than 192, such as not more than 191, such as not more than 190, such as not more than 189, such as not more than 188, such as not more than 187, such as not more than 186, such as not more than 185, such as not more than 184, such as not more than 183, such as not more than 182, such as not more than 181, such as not more than 180, such as not more than 179, such as not more than 178, such as not more than 177, such as not more than 176, such as not more than 175, such as not more than 174, such as not more than 173, such as not more than 172, such as not more than 171, such as not more than 170, such as not more than 169, such as not more than 168, such as not more than 167, such as not more than 166, such as not more than 165, such as not more than 164, such as not more than 163, such as not more than 162, such as not more than 161, such as not more than 160, such as not more than 159, such as not more than 158, such as not more than 157, such as not more than 156, such as not more than 155, such as not more than 154, such as not more than 153, such as not more than 152, such as not more than 151, such as not more than 150, such as not more than 149, such as not more than 148, such as not more than 147, such as not more than 146, such as not more than 145, such as not more than 144, such as not more than 143, such as not more than 142, such as not more than 141, such as not more than 140, such as not more than 139, such as not more than 138, such as not more than 137, such as not more than 136, such as not more than 135, such as not more than 134, such as not more than 133, such as not more than 132, such as not more than 131, such as not more than 130, such as not more than 129, such as not more than 128, such as not more than 127, such as not more than 126, such as not more than 125, such as not more than 124, such as not more than 123, such as not more than 122, such as not more than 121, such as not more than 120, such as not more than 119, such as not more than 118, such as not more than 117, such as not more than 116, such as not more than 115, such as not more than 114, such as not more than 113, such as not more than 112, such as not more than 111, such as not more than 110, such as not more than 109, such as not more than 108, such as not more than 107, such as not more than 106, such as not more than 105, such as not more than 104, such as not more than 103, such as not more than 102, such as not more than 101, such as not more than 100, such as not more than 99, such as not more than 98, such as not more than 97, such as not more than 96, such as not more than 95, such as not more than 94, such as not more than 93, such as not more than 92, such as not more than 91, such as not more than 90, such as not more than 89, such as not more than 88, such as not more than 87, such as not more than 86, such as not more than 85, such as not more than 84, such as not more than 83, such as not more than 82, such as not more than 81, such as not more than 80, such as not more than 79, such as not more than 78, such as not more than 77, such as not more than 76, such as not more than 75, such as not more than 74, such as not more than 73, such as not more than 72, such as not more than 71, such as not more than 70, such as not more than 69, such as not more than 68, such as not more than 67, such as not more than 66, such as not more than 65, such as not more than 64, such as not more than 63, such as not more than 62, such as not more than 61, such as not more than 60, such as not more than 59, such as not more than 58, such as not more than 57, such as not more than 56, such as not more than 55, such as not more than 54, such as not more than 53, such as not more than 52, such as not more than 51, such as not more than 50, such as not more than 49, such as not more than 48, such as not more than 47, such as not more than 46, such as not more than 45, such as not more than 44, such as not more than 43, such as not more than 42, such as not more than 41, such as not more than 40, such as not more than 39, such as not more than 38, such as not more than 37, such as not more than 36, such as not more than 35, such as not more than 34, such as not more than 33, such as not more than 32, such as not more than 31, such as not more than 30, such as not more than 29, such as not more than 28, such as not more than 27, such as not more than 26, such as not more than 25 contiguous nucleotides. In some embodiments the promoter DNA polynucleotide according to the invention exhibits an increased protein expression level as compared to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4.
In some embodiments the increase in protein expression level is from about 50 percent to about 300 percent relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4, or to the pOPIE2 promoter. In some embodiments the increase in protein expression level is more than 300 percent relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4, or to the pOPIE2 promoter.
In some embodiments the increase in protein expression level is 2 fold to 10 fold relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4, or to the pOPIE2 promoter.
In some embodiments the increase in protein expression level is 10 fold to 100, such as 20 to 80, such as 20 to 40 fold, relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4, or to the pOPIE2 promoter.
It is to be understood that the increase in activity is measured and compared to the reference under same and standard conditions.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises a selection marker, such as a selection marker selected from the group consisting of a Zeocin selection marker, a Neomycin selection marker, a Hygromycin selection marker, a Puromycin selection marker, and a Blasticidin selection marker.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises a bacterial promoter, such as the pKANR bacterial promoter, such as a functional fragment of Kanamycin promoter.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises a second promoter DNA polynucleotide suitable to drive the expression of the selection marker in an insect cell. In some embodiments this second promoter is selected from the group consisting of (i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37; (ii) a nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
(iv) a nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
(vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises one or more ubiquitous chromatin opening element upstream and/or downstream relative to the a multiple cloning site.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one Transcriptional insulator element, such as Su(Hw) or Gypsy (GSu(Hw)) insulator sequence. (MoI Cell Biol. 1997 April; 17(4): 2202-2206.)
In some embodiments the isolated DNA polynucleotide according to the invention further comprises a dihydrofolate reductase (dhfr) coding sequence suitable for selection in insect cells.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one polyadenylation signal sequence such as SV40 polyA signal and/or an 0PIE2 polyA signal.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises an E.coli origin.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one protein export signal polynucleotide sequence, such as one selected from the list consisting of BIP and CPY. In some embodiments the isolated DNA polynucleotide according to the invention is essentially free of viral DNA.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one HIS-tag sequence. In some embodiments the HIS-tag is an N-terminal HIS-tag. In some embodiments the HIS-tag sequence is according to the following sequence: atgaaacaccaacaccaacatcaacatcaacatcaacatcaa (SEQ ID NO: 38)
In some embodiments the isolated DNA polynucleotide according to the invention further comprises a multiple cloning site downstream of the promoter DNA polynucleotide for insertion of the gene encoding a polypeptide of interest into the isolated DNA polynucleotide.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one 72bp elements from SV40. In some embodiments the isolated DNA polynucleotide according to the invention further comprises two 72bp elements from SV40. In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one 72bp elements from SV40 upstream of the promoter and at least one 72bp elements from SV40 downstream of the promoter.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one PRE element from Hepatitis B virus. In some embodiments the PRE element from Hepatitis B virus is according to SEQ ID NO:40, such as nucleotides 10 to 574 of SEQ ID NO:40.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one amplification control element.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one Ori-beta element.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one matrix attachment region (MAR) element.
In some embodiments the promoter DNA polynucleotide sequence according to the invention controls the expression of a gene or other DNA sequence to which it is linked. In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one polynucleotide sequence encoding a polypeptide heterologous to the promoter DNA polynucleotide sequence.
In some embodiments the isolated DNA polynucleotide according to the invention further comprises at least one nucleotide sequence which is a functional fragment of at least three contiguous nucleotides of any one sequence of a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68; and a functional nucleotide sequence with a sequence identity of at least 80% thereof, said functional fragment having promoter enhancer activity in a Drosophila S2 cell.
In some embodiments the isolated DNA polynucleotide according to the invention is a cloning vector.
In some embodiments the isolated DNA polynucleotide according to the invention is an expression vector.
One aspect relates to a cell comprising the isolated DNA polynucleotide according to the invention. In some embodiments the cell is an insect cell. In some embodiments the cell is a Drosophila melanogaster cell. In some embodiments the cell is a Drosophila melanogaster S2 cell.
In some embodiments the cell comprising the isolated DNA polynucleotide according to the invention is stably transfected with said isolated DNA polynucleotide.
As used herein "stably transfected" refers to a cell that has been transfected with a DNA polynucleotide according to the invention to produce permanent lines of cultured cells with a new gene inserted into their genome. Usually this is done by linking the desired gene with a "selectable" gene, i.e. a gene which confers resistance to a antibiotic (like Zeocin). Upon putting the antibiotic into the culture medium, only those cells which incorporate the resistance gene will survive, and essentially all of those will also have incorporated the DNA polynucleotide according to the invention.
A "cloning vector" means a plasmid DNA which can be used to insert a DNA fragment of interest into a host cell, normally in order to produce multiple copies of the fragment and hence the vector. "Expression vector" means a plasmid or viral DNA containing necessary regulatory signals for the synthesis of mRNA derived from gene sequences, which can be inserted into the vector. The gene sequences being e.g. a chimeric polynucleotide as defined above.
A "polyadenylation sequence" as used herein refers to a DNA sequence which when transcribed is recognized by the expression host to add polyadenosine residues to transcribed mRNA. It is operably linked to the 3'-end of the DNA encoding the polypeptide to be expressed. Suitable polyadenylation sequences includes the 0PIE2 polyA tail and the late SV40 polyA tail as described in Angelichio et al. 1991, Comparison of several promoters and polyadenylation signals for use in heterologous gene expression in cultured Drosophila cells, Nucleic Acids Research, Vol. 19, No. 18 5037-5043.
A "selectable marker" as used herein refers to a genetic element present in an expression vector, which, when expressed, provides an indication of successful transformation of the host cell. For instance, the selectable marker may provide the transformed host cell with resistance to an antibiotic (a dominant type marker) one or with the ability to metabolise a particular nutrient (an auxotrophic type of selectable marker, i.e. a marker that "cures" a deficiency in the host). Typically, the selectable marker is under the control of a promoter that is separate from the promoter that controls expression of the gene to be expressed by the vector.
The term "operably linked" refers to the association of nucleic acid sequences on a single nucleic acid fragment so that the function of one is affected by the other. For example, a promoter is operably linked to a coding sequence when it is capable of affecting the expression of that coding sequence (i.e., that the coding sequence is under the transcriptional control of the promoter).
The term "expression", as used herein, refers to complete biological process in a host cell that sets out from the transcription and stable accumulation of mRNA derived from the isolated DNA polynucleotide of the invention (where this further comprises a polynucleotide sequence encoding a polypeptide) through subsequent translation of mRNA into a polypeptide product and finally to post-translational modifications of the polypeptide product effected by the host cell. "Overexpression" refers to the production of a gene product in transformed cells that exceeds levels of production in normal, non-transformed cells.
As used herein a "protein export signal polynucleotide sequence" refers to a sequence that directs or facilitates the translocation of an expressed protein across the membrane of the host expression cell. A "protein export signal polynucleotide sequence" may be present in the N-terminus of a precursor polypeptide (a pre-peptide or pre-pro-peptide) to directs its translocation across a membrane. Typically, a precursor polypeptide is processed by cleavage of the signal sequence to generate a mature peptide or a pro-peptide. If the product of off- cleavage of the signal peptide is a pro-peptide, the mature peptide is the product of subsequent post-translational modifications that involve further removal of amino acids.
Other suitable "protein export signal polynucleotide sequence" within this definition includes the Drosophila BiP signal sequence for secretion and CPY.
The Drosophila BiP protein encodes an immunoglobulin-binding chaperone protein. This secretion signal efficiently targets high levels of BiP into the secretory pathway of S2 cells (see Kirkpatrick, R. B. et al. (1995) J. Biol. Chβm. 270: 19800-19805).
The terms "ubiquitous chromatin opening element" or "UCOE" as used herein refers to a DNA sequence which opens chromatin or maintains chromatin in an open state and facilitates reproducible expression of an operably-linked gene in cells.
The terms "matrix attachment region" or "MAR" or "Scaffold/matrix attachment region" as used herein refers to a nucleotide sequence in the DNA of eukaryotic chromosomes where the nuclear matrix attaches. MARs mediate structural organization of the chromatin within the nucleus. These elements constitute anchor points of the DNA for the chromatin scaffold and serve to organize the chromatin into structural domains. Studies on individual genes led to the conclusion that the dynamic and complex organization of the chromatin mediated by S/MAR elements plays an important role in the regulation of gene expression.
The terms "amplification control element" or "Ace" as used herein refers to an element, which is involved in initiating amplification of DNA from the replication origin. Deletion analyses of transgenic constructs derived from the third chromosome cluster have identified a 320-bp amplification control element (ACE3) required for amplification. Thus within this definition is included the D. melanogaster ACE3 element. Included within this definition is also amplification enhancing regions (AERs).
The terms "Ori-beta element" or "oriB" as used herein refers to an origin of replication. The origin of replication (also called the replication origin) is a particular sequence in a genome or plasmid at which replication is initiated. This can either be DNA replication in living organisms such as prokaryotes and eukaryotes, or RNA replication in RNA viruses, such as double- stranded RNA viruses. DNA replication may proceed from this point bidirectionally or unidirectionally. The origin of replication binds the pre-replication complex, a protein complex that recognizes, unwinds, and begins to copy DNA. One specific "Ori-beta element" within this definition is the D. melanogaster Ori-beta element. For sequence requirements for functional ACE3 and ori-B elements see Hongjun Zhang and John Tower, 2004, Sequence requirements for function of the Drosophila chorion gene locus ACE3 replicator and ori-b origin elements, Development 131, 2089-2099, 2004 and Carminati et al. 1992, The Drosophila ACE3 Chorion Element Autonomouslylnduces Amplification, MOLECULAR AND CELLULAR BIOLOGY, May 1992, p. 2444-2453.
Effect of SV40 72bp element on DNA vaccines
Nuclear import in non-dividing cells such as muscle cells is one of the problems for non-viral gene delivery systems. This can result in lowered synthesis of the antigen that will subsequently result in poor antigen presentation. A 72 bp repeat of the SV40 enhancer region that enhances nuclear transport of nonviral DNA in non dividing cells has been identified. The enhancer region has several transcription factor binding sites. As soon as the plasmid enters the cytoplasm, it is bound by several transcription factors thus allowing the nonviral DNA to be rapidly transferred to the nucleus by providing the nuclear localization signal (Exp Cell Res. 1999, 253, 713). Enhancement in gene expression was also observed using the SV40 enhancer element containing vector injected in murine muscle by electroporation (Gene Ther., 2001, 8, 494).
The term "72bp elements from SV40" as used herein refers to the 72 bp repeat of the SV40 enhancer region that enhances nuclear transport of nonviral DNA in non dividing cells. In particular embodiments the "72bp elements from SV40" refers to an element with the following sequence
ATGCTTTGCATACTTCTGCCTGCTGGGGAGCCTGGGGACTTTCCACACCCTAACTGACACACATTCCA CAGCTGGTT corresponding to nucleotide no. 10 to nucleotide no. 86 of SEQ ID NO: 39 In particular embodiments the "72bp elements from SV40" refers to an element with the sequence of SEQ ID NO: 39.
PRE element from Hepatitis B virus (SEO ID NO:40)
Some eukaryotic or viral mRNA contains inhibitory sequences preventing them from being transported out of nucleus to the cytoplasm where they can be translated. Hepatitis B virus S transcripts contain a region, known as the posttranscriptional regulatory element (PRE) that functions in cis to activate their transportation. This element can partially substitute for the human immunodeficiency virus Rev-response element (RRE). It has been shown that adding this element or elements with similar function in the 3' untranslated region of the gene encoding the antigen (such as HIV-I Gag) can increase the expression level of the antigen and improve immune responses.
The term "insulator sequence", as used herein refers to DNA sequences that affect interactions between promoters and enhancers/silencers and function as barriers for spreading of repressive chromatin. Included within this definition is the (su(Hw)) insulator sequence as described in Lu L, Tower J, 1997, A transcriptional insulator element, the su(Hw) binding site, protects a chromosomal DNA replication origin from position effects, MoI Cell Biol. April; 17(4): 2202-2206. Among the variety of sequences with an insulator function present in the Drosophila melanogaster genome, the well-studied and perhaps the strongest insulator consisting of reiterated binding sites forthe Su(Hw) protein, first found in the gypsy retrotransposon may be used. The Su(Hw) insulator is a versatile modulator of regulatory interactions, blocking more than a score of different enhancers. Recently, an endogenous Su(Hw)-dependent but structurally distinct insulator has been found between the χe//ow and achaete genes.
The term "ligation independent cloning" or "LIC" is used herein according to the definition by Robert E. Novy, Keith W. Yaeger and Kristin M. KoIb in the article "Efficient Directional Cloning of PCR Products" (http://www.emdbiosciences.com/docs/NDIS/inno05-002.pdf), ligation independent cloning (LIC) can be described as follows: "Ligation independent cloning (LIC) was developed for the directional cloning of PCR products without restriction enzyme digestion or ligation reactions. LIC vectors are created by treating a linearized backbone with T4 DNA polymerase in the presence of only one dNTP. The 3' to 5' exonuclease activity of T4 DNA polymerase removes nucleotides until it encounters a residue corresponding to the single dNTP present in the reaction mix. At this point, the 5' to 3' polymerase activity of the enzyme counteracts the exonuclease activity to effectively prevent further excision. Plasmid sequences adjacent to the site of linearization are designed to produce specific non- complementary 13- or 14-base single stranded overhangs in the LIC vector. PCR products with complementary overhangs are created by building appropriate 5' extensions into the primers. The PCR product is purified to remove dNTPs (and original plasmid if it was used as template) and then treated with T4 DNA polymerase in the presence of the appropriate dNTP to generate the specific vector-compatible overhangs. The annealed LIC vector and insert are transformed into competent E. coli cells. Covalent bond formation at the vector insert junctions occurs within the cell to yield circular plasmid."
A detailed description of LIC methodology can be found in Nick S. Berrow et al. 2007 M versatile ligation-independent cloning method suitable for high-throughput expression screening applications", Nucleic Acids Research.
A number of specific embodiments of LIC enabled vectors of the present invention are provided in SEQ ID NOs. 69-73.
In one specific embodiment the isolated DNA polynucleotide according to the invention consists of the following elements: 1. Insect selection marker, with an insect promoter driving expression, such as Truncated D. melanogaster Actin5C promoter or HSP70 promoter with a nucleotide sequence according to SEQ ID NO: 5, SEQ ID NO: 6, or SEQ ID NO:2;
2. bacterial promoter, such as the pKANR bacterial promoter; 3. Zeocin selection marker with SV40 polyA tail;
4. E.coli origin;
5. Hybrid Drosophila melongaster 612bp Actin5C promoter with a nucleotide sequence according to SEQ ID NO:6, wherein parts or the whole of the actin core sequence (such as nucleotides 478 to 572 of SEQ ID NO:6) have been replaced with the HSP70 core promoter with a nucleotide sequence according to SEQ ID NO: 1, SEQ ID NO:2,
SEQ ID NO: 37, or a fragment thereof to drive protein expression;
6. BIP protein export signal sequence;
7. Multiple cloning site; and
8. 0PIE2 polyA tail.
In one specific embodiment the isolated DNA polynucleotide according to the invention consists of the following elements:
1. Insect selection marker, with an insect promoter driving expression, such as Truncated D. melanogaster Actin5C promoter or HSP70 promoter with a nucleotide sequence according to SEQ ID NO: 5, SEQ ID NO: 6, or SEQ ID NO:2; 2. bacterial promoter, such as the pKANR bacterial promoter;
3. Zeocin selection marker with SV40 polyA tail;
4. E.coli origin;
5. Drosophila melongaster 457bp Actin5C promoter with a nucleotide sequence according to nucleotides 2076-2532 of SEQ ID NO:3; 6. BIP protein export signal sequence;
7. Multiple cloning site; and
8. 0PIE2 polyA tail.
In one specific embodiment the isolated DNA polynucleotide according to the invention consists of the following elements:
1. Insect selection marker, with an insect promoter driving expression, such as
Truncated D. melanogaster Actin5C promoter or HSP70 promoter with a nucleotide sequence according to SEQ ID NO: 5, SEQ ID NO: 6, or SEQ ID NO:2;
2. bacterial promoter, such as the pKANR bacterial promoter;
3. Zeocin selection marker with SV40 polyA tail; 4. E.coli origin; 5. Hybrid of Drosophila melongaster 457bp Actin5C promoter with a nucleotide sequence according to nucleotides 2076-2532 of SEQ ID NO:3, wherein parts or the whole of the actin core sequence (such as nucleotides 2392 to 2487 of SEQ ID NO: 3) have been replaced with the HSP70core promoter with a nucleotide sequence according to SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:37, or a fragment thereof to drive protein expression;
6. BIP protein export signal sequence;
7. Multiple cloning site; and
8. 0PIE2 polyA tail.
In one specific embodiment the isolated DNA polynucleotide according to the invention consists of the following elements:
1. Insect selection marker, with an insect promoter driving expression, such as
Truncated D. melanogaster Actin5C promoter or HSP70 promoter with a nucleotide sequence according to SEQ ID NO: 5, SEQ ID NO: 6, or SEQ ID NO:2; 2. bacterial promoter, such as the pKANR bacterial promoter;
3. Zeocin selection marker with SV40 polyA tail;
4. E.coli origin;
5. HSP70core promoter with a nucleotide sequence according to SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 37, or a fragment thereof to drive protein expression and one or more functional fragments of the Actin5C promoter (Actin5c regulatory elements) in cis relative to the HSP70core promoter;
6. BIP protein export signal sequence;
7. Multiple cloning site; and
8. 0PIE2 polyA tail.
In some specific embodiments the following elements will be exchanged in the isolated DNA polynucleotide according to the invention:
1. Su(Hw) elements may be placed in front and after the expression cassette (expression promoter, gene-of-interest and polyA tail); and/or
2. The Zeocin selection marker may be replaced in the expressing vectors by: a. Neomycin selection marker, or b. Blasticidin selection marker, or c. hygromycin selection marker, or, d. or puromycin selection marker; and
3. The expression construct will be made with and without the HIS-tag. One suitable vector according to the invention may consist of:
1. Bacterial selection marker, with a bacterial promoter a. pKANR bacterial promoter b. Zeocin selection marker (ZeoR and/or KanR) 2. Insect selection marker, with an insect promoter driving expression a. Truncated Drosophila melanogaster Actin5C promoter or HSP70 promoter b. Zeocin selection marker with SV40 polyA tail
3. E.coli origin
4. Truncated Drosophila melanogaster Actin5C or HSP70 promoters to drive protein expression
5. BIP protein export signal sequence
6. HIS-tag
7. Multiple cloning site
8. 0PIE2 polyA tail
It is to be understood from the above that the individual elements may be placed in any given order. Accordingly the insect promoter and the bacterial promoter may be placed directly following each other. Also the same selection marker sequence may be used by both the bacterial promoter and by the insect cell promoter.
General vector improvements The following elements may be added to the expression vector to increase expression level.
1. Ubiquitously chromatin opening elements up and downstream of the gene-of-interest expression cassette; and/or
2. Pre-element, and 72 bp element of SV40; and/or
3. MARs (matrix attachment regions); and/or 4. ACE3 and ori-Beta from D. melanogaste; and/or
5. Transcriptional insulator element, the su(Hw) binding site (MoI Cell Biol. 1997 April; 17(4): 2202-2206.); and/or
6. CPY element to replace BIP (if CPY found functional in S2); and/or
7. dhfr can be inserted for selection in insect cells; and/or 8. Separate kanamycin or ampicilin resistance cassette may be inserted for bacterial selection; and/or
9. Replace 0PIE2 polyA tail with late SV40 polyA tail and/or
10. Introduce an intron downstream of the promotor for driving protein expression and/or
11. a ligation independent cloning cassette can be included. In some embodiments a polynucleotide sequence according to the invention hybridizes under conditions of moderate stringency to a sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37, or SEQ ID NO: 58;
(ii) a nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i);
(iii) a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii); (iv) a nucleotide sequence with a sequence identity of at least 80% to the at least 6 nucleotide functional fragment of (iii);
(v) a chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv).
The term "moderate stringency" as used herein refers to conditions of polynucleotide hybridization in about 50% formamide, 6xSSC at about 42°C and washing conditions of about 600C, 0.5xSSC, 0.1% SDS.
Methods of the invention for protein expression
Another aspect of the present invention relates to expression and recovery of polypeptides from host cells.
As detailed above, this aspect of the invention generally utilises the finding that promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4,
SEQ ID NO: 5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37, or SEQ
ID NO: 58; (ii) a nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell;
(iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
Drosophila S2 cell; (iv) a nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell;
(v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and (vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell; provides for improved yields when expressing secreted polypeptides.
The present inventor has recently demonstrated that this improved yield (over e.g. construct utilising the pOPIE2 promoter) is a consequence of improved expression levels as well as secretion. As mentioned above the method according to the invention comprises the steps of
(a) obtaining a polynucleotide sequence encoding the polypeptide of interest;
(b) inserting said polynucleotide sequence encoding the polypeptide of interest into the isolated DNA polynucleotide according to any one of claims 1-27;
(c) transforming a host cell with the polynucleotide obtained under step (b);
(d) allowing for the expression of said polynucleotide obtained under step (b) to produce the polypeptide; and
(e) obtaining the polypeptide there from.
Methods for transformation will vary according to the choice of host cell, but typically transfection by means of lithium acetate (Okazaki et al. Nucleic acid Res. 18: 6485-6489, 1990, incorporate by reference herein) or electroporation is used in yeast, whereas both transfection and transduction (i.e. transfer of genetic material by means of a viral vector) may be used in cells from multicellular organisms. Suitable methods for transfection in Drosophila melanogaster S2 cells is described in Park J. H.; Kim H. Y.; Han K. H.; Chung I. S, Optimization of transfection conditions for expression of green fluorescent protein in Drosophila melanogaster S2 cells - a highly efficient, lipid-mediated DNA-transfection procedure. Enzyme and Microbial Technology, Volume 25, Number 7, October 1999, pp. 558- 563(6)
More general teachings on transformation and culture of transformed cells (yeast or higher) can be found in Sambrook J et al., "Molecular Cloning: A laboratory Manual", 3rd edition.
The teachings provided above concerning choice of promoter, functional secretion signal peptides, choice of format of vectors, choice of host cells, use of selectable markers, and use of stabilizing elements, apply mutatis mutandis to the method of the invention. The only difference in these teachings and the teachings pertaining to the method of the invention is the precise composition of the coding sequence in the vector, since the method of the invention does not rely on the presence of a chimeric polynucleotide as defined herein. It is however, preferred that the expression vector used in the method of the invention is an expression vector of the invention.
It some embodiments, the method of the invention comprises the further step of subjecting the polypeptide obtained in step (c) to post-translational modification - this entails both post- translational modifications that are effected by the host cell (and subsequently made before recovery of the polypeptide) and modifications made in vitro after recovery of the polypeptide.
Step (a) of the method of the invention normally comprises the steps of introducing the vector into the host cell and subsequently selecting transformants that express a selectable marker gene present in the vector. Useful selectable marker genes have been detailed above.
The invention will be illustrated by means of the following non-limiting examples.
EXAMPLE 1
ABBREVIATIONS
Table 1 :
ATCC The American Type Culture Collection
CEP Cells, Experimental Protocol
DMSO Dimethyl Sulfoxide
ELISA Enzyme Linked Immuno Sorbent Assay
FBS Foetal Bovine Serum
LAF Laminar Air-Flow
PCR Polymerase Chain Reaction
T25 Tissue culture flask, 25 cm2
T75 Tissue culture flask, 75 cm2
V Volume
Wt Wild type
Bp Base pair
SOE-PCR Spliced by Overlap Extension
ON Over night
LB Lauria Broth
DNA Deoxyribonucleic
E.coli Escherichia coli MATERIALS AND METHODS
Cell line
Drosophila S2 cells was derived from ATCC (CRL-1963, lot. no. 3225543)
A vial of Drosophila S2 cells from ATCC was resuscitated and expanded in tissue culture flasks. When the cell number exceeded 108 cells, a cell bank consisting of twenty vials containing 2xlO7 Drosophila S2 cells in 1 mL freeze medium (Excell420 + 50% FBS + 10% DMSO) was established and stored at -800C.
Plasmid Construction
Raw Materials (Table 2):
Figure imgf000040_0001
Figure imgf000041_0001
Commercially obtained vectors (Table 3):
Figure imgf000041_0002
Figure imgf000041_0003
Figure imgf000042_0001
For this study the model protein, RANK ligand (RANK-L, or RANKL) was used. This protein was inserted after the BIP-signal sequence, in the multiple cloning site, in each of the tested vectors.
pKanR sequence used according to the present examples: AAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTT
CATAGTATAATACGACTCACTATAGGAGGGCC (SEQ ID NO: 63, sequence in bold KanaR promoter, remaining sequence EM7 promoter).
Construction of the S2 vectors pZOp2F-NheI (p2260, strain MR#3070).The vector was created with Nhel-site downstream SV40 by using QuikChange Site-Direct Mutagenesis Kit from Stratagene, for cloning vectors with different promoters
The QuickChange was made with primers 975 and 976 using pl205 as template. The PCR product was treated with Dpnl for one hour at 37°C and transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
The plasmid has been fully sequenced using primers 590
pHPll (p2263, strain MR#3073) was constructed by one step PCR amplification The PCR was made with primers 980 and 979 using p805 (pAc5.1/V5-HιsA) as template. The resulting fragment was 2540 bp, containing Actin 5C promoter. The PCR fragment digested with restrictions endonucleases Nhel and HindIII and clone into Nhel and HindIII digested and SAP treated p2260. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primers 590, 981, 986 and 917.
pHP12-vector (p2263, strain MR#3073) was constructed by one step PCR amplification. The PCR was made with primers 981 and 982 using p2546 as template. The resulting fragment was 299 bp, containing Hsp70 promoter from Hsp70-pFast-Bac which was taken from genomic DNA from S2-cells.
The PCR fragment digested with restrictions endonucleases Nhel and HindIII and clone into Nhel and HindIII digested and SAP treated p2260. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primers 590, 981, 986 and 917.
pHP13 (p2264, strain MR#3074) was constructed by one step PCR amplification. The PCR was made with primers 983 and 984 using p2546 as template. The resulting fragment was 473 bp, containing full-length Hsp70 promoter from Hsp70-pFast-Bac which was taken from genomic DNA from S2-cells.
The PCR fragment digested with restrictions endonucleases Nhel and HindIII and clone into Nhel and HindIII digested and SAP treated p2260. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primers 590, 984 and 917.
Change of OpIE2 and EM7 promoter upstream of ZeoR gene in vectors
pHP15a (p2270, strain MR#3080) The vector containing ptrc promoter instead EM7 promoter and Actin 5C promoter instead of
OpIE2 all upstrteam the ZeoR gene.
The construct was constructed by SOE-PCR. First PCRl fragment was made with primers
4007 and 4009 using p2263 as template. The resulting PCR-product have the size of 234 bp.
The second PCR2 fragment was made with primers 4008 and 4000 using p2263 as template. The fragment have the size of 1134 bp.
The SOE-PCR was made by mixing PCRl and PCR2 products. Finally the fragment is amplified using primers 4000 and 4009.
The resulting fragment was 1433 bp and digested with restrictions endonucleases EcoRI and
Ncol and clone it into EcoRI and Ncol digested and SAP treated p2263. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON. In the resulting plasmid the insert has been fully sequenced using primers 1892, 2232, 2233, 2234, 2235, 2236, 2007, 4000, 4002, 4007 and 4009.
pHP15b (p2271, strain MR#3081) The vector is almost like pHP15a but containing Hsp70 promoter instead of Actin 5C promoter upstream the ZeoR gene. Constructed by one step PCR amplification. The PCR was made with primers 4001 and 4002 using p2270 as template. The resulting fragment was 290 bp, containing actin 5c promoter.
The PCR fragment digested with restrictions endonucleases Xmnl and Sphl and clone into Xmnl and Sphl digested and SAP treated p2270. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing
0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primers 2007, 4000 and
4001.
pHP15c (p2272, strain MR#3082) containing promoter sequence upstream for KanaR instead of EM7 promoter upstream the ZeoR gene.
The construct was constructed by SOE-PCR. First PCRl fragment was made with primers
4003 and 4009 using p2270 as template. The resulting PCR-product have the size of 296 bp.
The second PCR2 fragment was made with primers 4004 and 2007 using p2270 as template. The fragment have the size of 189 bp.
The SOE-PCR was made by mixing PCRl and PCR2 products. Finally the fragment is amplified using primers 4009 and 2007.
The resulting fragment of 450 bp was digested with restrictions endonuclease(s) Sphl and Ncol and cloned into Sphl and Ncol digested and SAP treated p2270. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primers 2007 and 4003
Construction of truncated Actin 5c promoter from pHPll
pHP17 (p2276, strain MR#3086) containing truncated sequence from Actin 5c promoter 1486 bp. Vector p2262 was digested with restrictions endonucleases Sphl and Nhel and the vector was ligated again with use of Klenow. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
Colonies were screen by colony PCR using primers 590 and 980. Correct inserts display DNA fragment have size of 1510 bp.
In the resulting plasmid the insert has been fully sequenced using primers 590, 917, 990, 992, 993, 994, 995 and 2509
pHP18 (p2277, MR#3087) containing truncated sequence from Actin 5c promoter 612 bp.
Vector p2262 was digested with restrictions endonucleases Spel and Nhel and the vector was ligated again with use of Klenow. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
Colonies were screen by colony PCR using primers 590 and 980. Correct inserts display DNA fragment have size of 660 bp.
In the resulting plasmid the insert has been fully sequenced using primers 590, 917, 993, 995 and 2509
pHP12-Afl II (p2287, strain MR#3097) The vector was constructed by SOE-PCR. First PCRl fragment was made with primers 987 and 4036 using p2263 as template. The resulting PCR-product have the size of 217 bp.
The second PCR2 fragment was made with primers 4035 and 986 using p22630 as template. The fragment have the size of 190 bp.
The SOE-PCR was made by mixing PCRl and PCR2 products. Finally the fragment is amplified using primers 986 and 987.
The resulting fragment of 362 bp was digested with restrictions endonucleases Nhel and HindIII and cloned into Nhel and HindIII digested and SAP treated p2263. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primer 982. Cloning of hybrid vectors with actin5c core and Hsp70 core promoter.
pHP18-Afl II (p2288, strain MR#3098) The vectort was constructed by SOE-PCR. First PCRl fragment was made with primers 987 and 4038 using p2277as template. The second PCR2 fragment was made with primers 4037 and 986 using p2277 as template. The fragment have the size of 224 bp.
The SOE-PCR was made by mixing PCRl and PCR2 products. Finally the fragment is amplified using primers 986 and 987.
The resulting fragment of 689 bp was digested with restrictions endonucleases Nhel and HindIII and cloned into Nhel and HindIII digested and SAP treated p2277. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
In the resulting plasmid the insert has been fully sequenced using primer 980.
pHP19 hybrid actin5c core vector, containing Actin5C core promoter and Hsp70 promoter sequence upstream theHsp70 core promoter.
Vector p2288 was digested with restrictions endonucleases AfIII and HindIII, the resulting product have the size of 178 bp and the fragment clones into AfIII and HindIII digested p2287. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON.
Colonies were screen by colony PCR using primers 4000 and 917. Correct inserts display DNA fragment of expected size. In the resulting plasmid the insert has been fully sequenced using primers 980 and 917.
pHP20 hybrid-Hsp70-core, containing Hsp70 core promoter and Actin5C promoter sequence upstream the Actin5c core promoter.
Vector p2287 was digested with restrictions endonucleases AfIII and HindIII, the resulting product have the size of 144 bp and clone it into AfIII and HindIII digested p2288. Ligated over night in a termo cycler. The ligation product was transformed into DHlOB cells, plated out on LB Agar plates containing 0,75 ug/ml Zeocin and incubatet ON. Colonies were screen by colony PCR using primers 993 and 901. Correct inserts display DNA fragment have size 478 bp. In the resulting plasmid the insert has been fully sequenced using primers 986 and 917
Cell line growth and maintenance
Materials
Cryovials, 1.8 ml: Nunc cat.no. 377267 Excell420: SAFC cat.no. 14420
Fetal Bovine Serum, FBS, 500 ml: Life Technologies cat.no. 10099-141 Shake flasks, 250ml with 0.2μrτn vented cap: Corning cat.no. 431144 (Working volume: 25- 70ml)
Shake flasks, 1000ml with 0.2μrτn vented cap: Corning cat.no. 431147 (Working volume:
100-225ml)
Tissue Culture Flasks, 25cm2: Greiner cat.no. 690160 (Working volume: 4-8ml)
Tissue Culture Flasks, 75cm2: Greiner cat.no. 658170
Initiating of cell culture from frozen stock
1. Remove one (or more) vial(s) from liquid nitrogen and place in a 23°C water bath. Thaw rapidly with gentle agitation until cells are almost thawed. Remove the vial(s) from the water bath. Each vial contains 4E7 cells in ImI freeze medium (40% Excell420 + 50% FBS + 10% DMSO) 2. Quickly decontaminate the outside of the vial by treating with 70% ethanol and gently transfer the cell suspension to a centrifuge tube containing 7 ml 23°C medium (Excell420 + 10% FBS) and centrifuge at 330xg for 2 minutes
3. Discard the medium to remove DMSO, resuspend the cells in 5ml 23°C medium (Excell420 + 10% FBS) and transfer the suspension to a T25 4. Incubate at 23°C until cells reach a density of 6E6-9E6 cells/ml. This may take 2-4 days. Inspect and count the cells daily by the use of a cell counter and note cell concentration and viability. Viability will typically increase to 80-90% within 3-4 days.
Expansion of the cells in T-flasks
1. Transfer the cell culture from the T25 to a T75 a nd add 10 m l 23°C medium (ExceM420 + 10% FBS) . Incubate at 23°C until cells reach a density of 6E6-9E6 cells/ml. This may take 2-4 days. Inspect and count the cells daily by the use of a cell counter and note cell concentration and viability. Viability will typically be >90%.
2. Transfer the cell culture in the T75 to two T75s and add 10 ml 23°C medium (ExceM420 + 10% FBS) to each of them. Incubate at 23°C until the cells reach a cell density of 6E6-9E6 cells/ml. This may take 2-4 days. Inspect and count the cells daily by the use of a cell counter and note cell concentration and viability. Viability will typically be >90%.
3. Transfer the cell culture from the two T75s to a 250 ml disposable shake flask and add 25 ml 23°C medium (ExceM420) . Incubate the cells at 110 rpm and 23°C until cells reach a density of 1.5E7-2E7 cells/ml. This may take 3-4 days. Inspect and count the cells from day 2 post-transfer by the use of a cell counter and note cell concentration and viability. Viability will typically be >90%.
Expansion of the cells in shake flasks
1. Transfer the cell culture from the R250 to a centrifuge tube and centrifuge the cells at 330xg for 5 minutes. Resuspend the cells in fresh medium (Excell420) to a cell density of 8E6 cells/ml in an appropriate shake flask. Incubate at 110 rpm and 23°C until cells reach a density of 2.5E7-3.5E7 cells/ml. This may take 3-4 days. Inspect and count the cells from day 2 post-transfer by the use of a cell counter and note cell concentration and viability. Viability will typically be >90%. 2. Expand the cell culture in 1000 ml shake flasks until a total cell number of 8.5E9 cells is obtained: Every 3-4 days, cells are split by centrifugation and resuspension to a cell density of 8E6 cells/ml in fresh medium (Excell420) into new shake flasks. The cells should be used for preparation of the Master Cell Bank two days after the last sub cultivation.
Preparation of a Cell Bank
1. Inspect and count the cells by the use of a cell counter and note cell concentration and viability. Viability will typically be >90%. Transfer cell suspension corresponding to 8E9 cells to a centrifuge tube and centrifuge at 330xg for 5 minutes. Resuspend the cells in 200 ml 4°C freeze medium (40% Excell420, 50% FBS and 10% DMSO) and quickly aliquot 1 ml cell suspension into each cryovial.
2. Transfer the cryovials to 4°C Mr. Frosty cryoboxes and place the boxes in a -800C freezer.
3. Transfer the cryovials after 6 to 48 hours to liquid Nitrogen for storage.
(Working volume: 12-25ml). Transfection of cells
Use cells from a growing culture maintained as stipulated above, that have been diluted or resuspended after centrifugation one to two days prior to the transfection. Viability should be > 90%.
1. Transfer cell suspension corresponding to ca. 3.2E7 cells per transfection to a centrifuge tube and centrifuge at ca. 125xg for ca. three minutes.
2. Resuspend in ca. 4 ml ca. 23°C medium per transfection and transfer 4 ml cell suspension to each T25s.
3. Transfer ca. 6.3 ug of each DNA to individual eppendorf tubes. 4. Add Buffer EC to the each eppendorf tube containing DNA to give a final volume of 150 ul.
5. Mix DNA and Buffer EC by pipetting up and down a couple of times.
6. Add 50 ul Enhancer to the eppendorf tubes containing DNA and Buffer EC. 7. Vortex the DNA mixture 1 sec.
8. Incubate at 20-25°C for two-five minutes.
9. Add 140 ul Effectene to the eppendorf tubes containing the DNA mixture.
10. Mix by pipetting up and down five times.
11. Incubate at 20-25°C for five-ten minutes. 12. Add 1.5 ml medium to the tubes and mix by pipetting up and down a couple of times.
13. Carefully let the DNA-mixture drop to the cell suspension in the T25 and carefully tip the flasks back and forth.
14. Incubate at ca. 23°C.
Other suitable methods for transfection in Drosophila melanogaster S2 cells is described in Park J. H.; Kim H. Y.; Han K. H.; Chung I. S, Optimization of transfection conditions for expression of green fluorescent protein in Drosophila melanogaster S2 cells - a highly efficient, lipid-mediated DNA-transfection procedure. Enzyme and Microbial Technology, Volume 25, Number 7, October 1999, pp. 558-563(6). Effectene Transfection Reagent is a non-liposomal lipid formulation that has minimal cytotoxicity by transfecting in the presence of serum and has high transfection efficiency. Effectene Reagent is used in conjunction with the Enhancer and the DNA-condensation buffer (Buffer EC) to achieve high transfection efficiencies.
Transient transfections
After transfection cells are allowed to grow and produce at 230C for 2 to 4 days before a sample is taken for cell number, protein-of-interest and total protein determination. No selection agent should be added during transient transfections.
Preparing stable cell lines After transfection the cells are allowed to grow for 1 to 2 days before 1.5mg/mL Zeocin (or other appropriate selection agent at appropriate concentration) is added. The cells are then expanded in T-flasks and shake flasks as described above (Expansion of the cells in T-flasks; Expansion of the cells in shake flasks). After 2 to 4 weeks only cells resistant to the selection marker, because of integration of the resistance marker into the genome, will be present and the cell line can be considered stable. The selection agent can at this point be left out from further cultivation or propagation steps, and the cells can be frozen down as described above.
Analysis
ELISA was used to analyze the model protein (RANK-ligand) used in this study. Bradford total protein analysis was used to determine total protein concentration.
RESULTS
A range of vectors with enhanced protein expression levels have been created. There are 3 main classes of NN2 expression vector: The first class comprises vectors with different variants of the actin5C promoter driving protein expression; the second class refers to vectors employing the HSP70 promoter, while the third involves hybrid actin5C/HSP70 promoters.
A mutant Actin5c promoter (see mutations under sequence alignment section) was investigated to determine its protein expression level (vector pHPll). It was found that the mutant Actin5C promoter resulted in a consistently higher expression level compared to pOPIE2 (See Fig. 1).
Two versions of the Drosophila melanogaster S2 HSP70 promoter were also tested. The first promoter was the full-length HSP70 promoter (457bp, vector pHP 1.3), while the second was a truncated version of HSP70 (59bp to 342bp, see sequences section, vector pHP12). The truncated version was found to have up to five-fold higher protein expression levels compared to the full-length promoter (see figure 2). It was also observed that the tuncated HSP70 promoter was expressed at high level in stable as well as transient cell lines (see figures 3 and 4).
The Actin5C promoter mutant and the truncated HSP70 promoter were further studied through truncation. The protein expression results for both transient and stable cell lines can be seen in figure 3 and 4.
A 3 to 9 fold increase in protein expression was achieved over the pOPIE2 promoter for the Actin5C and HSP70 promoter variants in stable cell lines (figure 3). Furthermore, an increase in average expression level over the full length Actin5c promoter was achieved by using the shortest truncated Actin5C promoter (Actin5C_3, vector pHP18), although more experiments will be needed to confirm if it has significantly higher expression. However, this trend can also be seen for transient transfections (see figure 4). The highest expression level was seen for the HSP70 promoter, while the HSP70 core promoter sequence led to a significantly reduced expression level compared to pOPIE2 as well as the truncated HSP70 promoter. The expression level of the HSP70 truncated promoter, although always higher than pOPIE2, was highly variable from transfection to transfection. It is expected that optimizing the transfection for this construct will reduce the variation in the different stable polyclonal cell lines. However, the stable polyclonal lines, once established, did not show significant variation in expression over time. The resulting stable polyclonal cell lines after transfection should therefore be screened before use to find the best expressing polyclonal pools.
Protein expression levels were increased 4 to 12 fold in transient transformations compared to the pOPIE2 promoter. The shortest truncated Actin5C promoter (vector pHP18) had the highest consistent expression level in transient transfections.
The core promoters of Actin5C (vector pHPl O) and HSP70 (vector pHP.l6) were compared to pOPIE2 to gain further insight into their relative properties. The expression level of the
HSP70 core promoter is significantly higher than the Actin5C core promoter, although both promoters are significantly weaker than the pOPIE2 promoter that was used as internal control. (Figure 5)
The Actin5C core promoter was used to express the ZeoR zeocin resistance gene in conjunction with the KanR bacterial promoter (vector pHP15c). This allows Zeocin to be used as selection marker in both E. coli and S2 insect cells. In addition, the Actin5C core promoter is significantly weaker than the pOPIE2 promoter used to express the zeocin resistance marker in p2ZOp2F. This leads to a 2-fold decrease in antibiotic resistance after transfection compared to cells transfected with the p2ZOp2F plasmid, leading to 2-fold less Zeocin (0.75mg/ml vs. 1.5mg/ml) to be used when selecting for stable cells.
Furthermore, different selection markers were included to allow for greater flexibility in the application of the vectors. The following markers are included: Zeocin, neomycin and blasticidin.
High expression level achieved by a mutant or truncated Actin5C promoter
The expression level of a mutant Actin5C promoter was compared to the commercially available pOPIE2 promoter and found to be significantly higher (see figure 1). Further increases in protein production level were achieved by truncating the Actin5C promoter to 612bp from the full-length 2532bp (SEQ ID NO:3). The truncated promoter led had a 5 fold increased protein production for stable cell lines when compared to the commercially available p2ZOp2F vector containing the pOPIE2 promoter. Also, transient expression levels where increased up to 12 fold compared to the expression level obtained with the p2ZOp2F vector, (see figure 3 and 4)
Effect of truncating the genomic HSP70 promoter
In Drosophila melanogaster S2 cells, regulatory mechanisms not only lead to induction of HSP70 from heat shock, but also prevent expression at normal temperatures (Feder et al. 1992, Genes Dev. Aug;6(8): 1402-13). Surprisingly, the truncated HSP70 promoter showed the highest expression level in stably transfected cell lines compared to the Actin5C and pOPIE2 promoters (see figure 3). However, 58 bp from the upstream end of the genomic full- length promoter and 114bp from the downstream end of the promoter was removed during cloning to create the truncated promoter. It appears likely that this truncation directly resulted in the deregulated (constitutive) high expression level observed. In figure 2 the constitutive high expression level of the truncated HSP70 promoter is contrasted with the low level expression of the full length promoter in transient transfections. This indicates a relief of repression of the promoter.
Reducing required Zeocin concentration during stable cell line selection
Using the significantly weakened expression level (compared to the full-length and pOPIE2 promoters) of Actin5C core promoter along with the KanR bacterial promoter results in hightened Zeocin sensitivity of transfected cell lines (2-fold). Lower resistance could help in selecting higher multicopy integration events to make up for the poor expression level of the ZeoR resistance marker, leading to higher gene-of-interest protein expression level. The ability to select for high copy-number gene-integration events using less Zeocin when making stable cell lines would be an advantage in itself, as Zeocin is a mutagen and could have adverse and unexpected effects on the cells.
Increased expression through Hybrid Actin5C/HSP70 promoters
In the above-discussed experiments it was found that the truncated HSP70 promoter led to the highest expression level in stable cell lines (Fig. 3). However, the highest expression level during transient transfections was achieved using the shortest truncated Actin5C promoter (Actin5C_3) (Fig. 4). Furthermore, it was found that the HSP70 core promoter had a 4 fold higher expression level compared to the Actin5C core promoter during transient transfection (Fig. 5).
It was therefore decided to make hybrid promoters, where the core promoter from Actin5C and HSP70 were exchanged in the truncated Actin5C and truncated HSP70 promoters, respectively. This was believed to lead to a significant increase in expression level in the Actin5C-HSP70core hybrid-promoter compared to the original Actin5C promoter.
Vector construction
The DNA for the pHP34s vector was ordered synthetically from GeneART, Germany (SEQ ID NO: 58). All vectors created from pHP34s were made using synthetic DNA ordered from GeneART, Germany and primers ordered from DNA-technoloαv, Denmark.
The hybrid promoter coding sequence was created in plasmid pHP34s-Hybrid, by PCR of the HSP70 core promoter encoding sequence from synthetic HSP70 promoter DNA (SEQ ID NO: 37) ordered from GeneART (PCR primers: GCGAACTTAAGAGCGCCGGAGTATAAATAG (SEQ ID NO: 64) and CCAAGCTTCTGCAGATTGTTTAGCTTG (SEQ ID NO: 65). A second PCR was then done to obtain the Actin 5c promoter upstream part of the promoter (primers: GGTTTGTCCAAACTCATCAATGTAT (SEQ ID NO: 66) and TATACTCCGGCGCTCTTAAGTTCGCTCGCGTTCAAAACTTTTACC (SEQ ID NO: 67)) from pHP34s, and the two PCR fragments were fused using PCR.
The resulting fused PCR product was then digested with Spel and Hindlll, and ligated into the pHP34s vector digested with Spel and Hindlll according to standard molecular biology procedures. The DNA can also be ordered synthetically for the hybrid promoter and cloned using the Spel and Hindi! into pHP34s-Hybrid. The intron (synthetic, SEQ ID NO: 60)) was ordered from GeneART and inserted by GeneART into the pHP34s-Hybrid vector between the Sad and EcoRI restriction sites to create the pHP34s-Hybrid.i vector.
The HSP70 matrix attachment region or hSAR element (SEQ ID NO: 59), was inserted into pHP34s-Hybrid in two positions flanking the expression cassette. The hSAR element was ordered as a synthetic sequence from GeneART with flanking Spel and Λ/arl sites on each side. The pHP34s-hybrid vector and hSAR containing GeneART vector were digested with NarI, the desired fragments gel purified and ligated to produce two vectors, pHP34s-Hybrid- hSAR-F or -R (-F or -R indicated forward or reverse orientation), with the hSAR element inserted in both orientations. Each of these two vectors and the GeneART hSAR containing vector were then digested with Spel, the desired fragments gel purified and ligated to create four vectors. The four vectors contain two hSAR elements in all four possible orientations.
The above mentioned vectors and synthetically ordered RANKL (variant hRP1.12-RA) and HA model protein DNA encoding sequences were digested with EcoRI and Notl, the desired fragments gel purified and ligated (for instance RANKL with one of the vectors or HA with one of the vectors) to produce the above mentioned vectors with RANKL or HA encoding DNA inserted. The resulting vectors were named with the hRP1.12-RA- vector name or HA-vector name, for instance: hRP1.12-RA, pHP34s-Hybrid.
Creation of RANKL and HA (from H5N1 avian flu) containing pMT/V5.HIS.A and pAC5.1 vectors. The vectors were obtained from Invitrogen, digested with EcoRI and Notl, the desired fragments gel purified and ligated with EcoRI and Notl digested and gel purified synthetic RANKL or HA as described above, to produce pMT/V5 and pAC5.1 vectors with RANKL encoding DNA inserted.
A kanamycin/Geneticin(G418) resistance marker vector was created and named pHP34s- Hybrid-KanR. The vector was created by inserting geneART ordered synthetic DNA coding for the KanR/NeoR gene (optimized for E. coli and S2 cell expression) and E. coll promoter into the pHP34s-Hybrid vector. The vector and insert were digested with Xmnl and Sail, the linear vector and kanR contaning fragments were gel purified and ligated according to standard procedures.
The vector map for hRP1.12-RA-pHP34s-Hybrid, pHP34s, pHP34s-hybrid-hSAR-FR, and pHP34s-hybrid.i are shown in Figs. 10-12. Transfection
For the comparison experiments the two Invitrogen vectors (pMT/V5.HIS.A and pAC5.1) were used. These two vectors do not contain a selection marker, and therefore were co-transfected with a hygromycin resistance conferring vector also obtained from Invitrogen (pCoHygro). The transfection was conducted according to the same protocol as for the pHP34s derived vectors, but the hygromycin resistence vector was added for the pMT/V5.HIS.A and pAC5.1 vectors at a ratio of 10: 1 (10 fold more expression vector than hygromycin resistance vector).
The remaining vectors were transfected according to the standard procedure detailed above.
Preparation of stable cell lines
The hygromycin resistant cells were made stable according to the same method described for the Zeocin resistant cells above, except that 600 ug/mL of Hygromycin was added to the media instead of 1500 ug/mL Zeocin.
The vector conferring kanamycin/ Geneticin (G418) resistance was transfected according to the method described above, but selection was done using between 1200 and 1500ug/mL of G418 in S2 cells or with standard Kanamycin concentration for E. coli cells.
Expression testing
CdCI2 induction.
The pMT/V5.HIS.A vector has a cadmium inducible promoter so for the expression comparison test the cells were induced with CdCL2. The cells were grown in shakeflasks for 2- 3 days and then induced using IuI of stock per ImI media (Stock: ImM CdCI2 Sigma C-2544 lotl3H0424: 183 mg in 1000 ml H2O). The cells were allowed to produce protein for a further three to four days before taking samples for analysis.
The remaining vectors have constitutive promoters and did hence not need to be induced. Samples were taken after 3-4 days of growth and production.
The experiments were conducted as duplicates or triplicates (see raw data below) in shake flasks. Results
Exchanging the weak core-promoter of the actin 5c promoter with the stronger HSP70 core promoter led to a 50% increase in expression over the truncated Actin 5c promoter (see Fig. 8).
We also tested the effect of a new element, an intron, specifically the intron described in the paper Zieler H., Huynh CQ. "Intron-dependent stimulation of marker gene expression in cultured insect cells", Insect MoI Biol. 2002 1, 87-95. The DNA sequence of this intron is set forth in SEQ ID NO: 60, where it is flanked by two restriction sites. So, according to the invention, the inclusion of a promoter such as SEQ ID NO: 60 between the promoter nucleic acid sequence and the coding sequence for a protein of interest can add significantly to the increased expression levels obtained by the present invention:
Fig. 9 demonstrates the effect of adding either the intron or two flanking matrix attachment regions to the hybrid promoter vector.
Figure 9 demonstrates that the addition of an intron increased the expression of the model protein by 22% and the addition of two flanking matrix attachment regions enhanced expression by 46% compared to the original hybrid promoter vector. It would be expected that the combination of the intron and matrix attachment regions in one vector would further enhance expression.
Finally, Fig. 13 demonstrates that the vectors of the invention provide significantly higher expression yields than 2 commercially available vectors.
To conclude, a significant increased expression level was obtained using the vectors developed in this work compared to the commercially available vectors.
The vector functionality was also improved by adding a second selection marker, kanamycin/ geneticin (G418). This allows co-transfection of two vectors expressing different proteins into one cell. It also allows for consecutive transformation with the Zeocin resistance and then kanamycin resistance markers (in any order). Table A1
Com arison ex eriment between HP34s-H brid and commmercial vectors for RANKL and HA
C/1 cσ
LTi
(J)
Figure imgf000057_0001
* Induce using CdCI2 HAofH5N1 avian flu 1 The cell count in is shown as (E6 cells/ml) / viability of cells (%)
Table A2 Testing of RANKL expression in hSAR containing pHP34s-Hybrid
Figure imgf000058_0001
Table A3
Transient
Promoter Protein (Relative exp level)
Hybrid -HSP70core RANKL 1.53
Hybrid -HSP70core RANKL 1.44
Truncated Actin 5C RANKL 1.57
Truncated Actin 5C RANKL ' 1.00 * * "
LIST OF SEQUENCES:
SEQ ID NO: 1: pHP 16. Full-length HSP70 promoter (bold sequence corresponds to SEQ ID NO:2)
CTAGAATCCCAAAACAAACTGGTTATTGTGGTAGGTCATTTGTTTGGCAGAAAGAAAACTCGAGAAAT
TTCTCTGGCCGTTATTCGTTATTCTCTCTTTTC I I I I I GGGTCTCTCCCTCTCTGCACTAATGCT
CTCTCACTCTGTCACACAGTAAACGGCATACTGCTCTCGTTGGTTCGAGAGAGCGCGCCTCGA
ATGTTCGCGAAAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCA
ATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAAACAAGCGCAGCT
GAACAAGCTAAACAATCTGCAGTAAAGTGCAAGTTAAAGTGAATCAATTAAAAGTAACCAGCAACC
AAGTAAATCAACTGCAACTACTGAAATCTGCCAAGAAGTAATTATTGAATACAAGAAGAGAACTCTGAA
TA
SEQ ID NO: 2: pHP12 Truncated HSP70 promoter (bold sequence corresponds to HSP70 CORE PROMOTER (SEQ ID NO:37)
CTCGAGAAATTTCTCTGGCCGTTATTCGTTATTCTCTC I I I I C I I I I I GGGTCTCTCCCTCTCTGCACTA ATGCTCTCTCACTCTGTCACACAGTAAACGGCATACTGCTCTCGTTGGTTCGAGAGAGCGCGCCTCGA ATGTTCGCGAAAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCAA TTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAAACAAGCGCAGCTGAA
CAAGCTAAACAATCTGCAG
SEQ ID NO: 3: pHPllb Actin5C mutant promoter from Nhel-Hindlll
GCTAGCTAAAAAAAATCATGAATGGCATCAACTCTGAATCAAATCTTTGCAGATGCACCTACTTCTCAT
TTCCACTGTCACATCATTTTTCCAGATCTCGCTGCCTGTTATGTGGCCCACAAACCAAGACACGTTTTA
TGGCCATTAAAGCTGGCTGATCGTCGCCAAACACCAAATACATAATGAATATGTACACATTCGAGAAA
GAAGCGATCAAAGAAGCGTCTTCGGGCGGAGTAGGAGAATGCGGAGGAGAAGGAGAACGAGCTGAT
CTAGTATCTCTCCACAATCCAATGCCAACTGACCAACTGGCCATATTCGGAGCAATTTGAAGCCAATTT
CCATCGCCTGGCGATCGCTCCATTCTTGGCTATATG I I I I I CACCGTTACCCGGGGCCATTTTCAAAGA
CTCGTCGGCAAGATAAGATTGTGTCACTCGCTGTCTCTCTTCATTTGTCGAAGAATGCTGAGGAATTTC
GCGATGACGTCGGCGAGTATTTTGAAGAATGAGAATAATTTGTATTTATACGAAAATCAGTTAGTGGA
ATTTTCTACAAAAACATGTTATCTATAGATAATTTTGTTGCAAAATATGTTGACTATGACAAAGATTGTA
TGTATATACCTTTAATGTATTCTCA I I I I LI I ATGTATTTATAATGGCAATGATGATACTGATGATATTTT
AAGATGATGCCAGACCAAAAGGCTTGAATTTCTGCGTL I I I I GCCGAACGCAGTGCATGTGCAATTGT
TG I I I I I I GGAATATTCAATTTTCGGACTGTCCGCTTTGATTTCAG I I I L I I GGCTTATTCAAAAAGCAA
AGTAAAGCCAAAAAAGCGAGATGGCAATACCAAATGCGGCAAAACGGTAGTGGAAGGAAAGGGGTG
CGGGGCAGCGGAAGGAAGGGTGGGGCGGGGCGTGGCGGGGTCTGTGGCTGGGCGCGACGTCACC
GACGTTGGAGCCACTCCTTTGACCATGTGTGCGTGTGTGTATTATTCGTGTCTCGCCACTCGCCGGTT
G I I I I I I I L I I I I I ATGCTGCGCTCTCTCTAGCGCCATCTCGCTTACGCATGCTCAACGCACCGCATGT
TGCCGTTTCLi I I I ATGCGTCATΠTGGCTCGAAATAGGCAATTATTTAAACAAAGATTAGTCAACGAA
AACGCTAAAATAAATAAGTCTACAATATGGTTACTTATTGCCATGTGTGTGCAGCCAACGATAGCAACA
AAAGCAACAACACAGGTGGCTTTCCCTCTTTCAL I I I I I GTTTGCAAGCCGCGTGCGAGCAAGACGGC
ACGACCGGCAAACGCAATTACGCTGACAAAGAGCAGACGAAGTTTTGGCGAAAAACATCAAGGCGCC
TGATACGAATGCATTTGCAATAACAATTGCGATATTTAATATTGTTTATGAAGCTGTTTGACTTCAAAAC
ACACAAAAAAAAAAATAAAACAAATTATTTGAAAGAGAATTAGGAATCGGACGCTTATCGTTAGGGTAA
CAACAAGAAATGCTTACTGAGTCACAGCCTCTGGAAAACTGCCGCAAGCCAGAGAGAGAGAGAAAAA
GAGGGAGAGCAGCTTAGACCGCATGTGCTTGTGTGTGAGGCGTCTCTCTCTTCGTCTCTGTTGCGCAA
ACGCATAGACTGCACTGAAAAAATCGATTACCTA I I I I I I ATGAATGAATATTTGCACTATTACTATTCA
AAACTATTAAGATAGCAATCACATTCAATAGCCAAATACTATACCACCTGAGCGATGCAACGAAATGAT
CAATTTGAGCAAAAATGCTGCATATTTAGGACGGCATCATTATAGAAATGL I I L I I GCTGTGTAL I I I I
CTCTCGTCTGGCAGCTGTTTCGCCGTTATTGTTAAAACCGGCTTAAGTTAGGTGTGTΠTCTACGACTA
GTGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGAT
AGCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATA
AACCCACTATAAACACATGTACATATGTATGTΠTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTA
AAAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATT
GAATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACAC
AAGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATAC
CCATATATGGTAAAAGTTTTGAACGCGACTTGAGAGCGGAGAGCATTGCGGCTGATAAGGTTTTAGCG CΓAAGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCT GTGTGGATACTCCTCCCGACACAAAGCCGCTCCATCAGCCAGCAGTCGTCTAATCCAGAGACAAGCTT
SEQ ID NO: 4: p805 Actin5C promoter (Sequence from pAc5.1 invitrogen)
GATACTTCTAAAAAAAATCATGAATGGCATCAACTCTGAATCAAATCTTTGCAGATGCACCTACTTCTC ATTTCCACTGTCACATCA I I I I I CCAGATCTCGCTGCCTGTTATGTGGCCCACAAACCAAGACACGTTT TATGGCCATTAAAGCTGGCTGATCGTCGCCAAACACCAAATACATATCAATATGTACATTCGAGAAAGA AGCGATCAAAGAAGCGTCTTCGGGCGAGTAGGAGAATGCGGAGGAGAAGGAGAACGAGCTGATCTA GTATCTCTCCACAATCCAATGCCAACTGACCAACTGGCCATATTCGGAGCAATTTGAAGCCAATTTCCA TCGCCTGGCGATCGCTCCATTCTTGGCTATATG I I I I I CACCGTTCCCGGGGCCATTTTCAAAGACTCG
TCGGTAAGATAAGATTGTGTCACTCGCTGTCTCTCTTCATTTGTCGAAGAATGCTGAGGAATTTCGCGA TGACGTCGGCGAGTATTTTGAAGAATGAGAATAATTTGTATTTATACGAAAATCAGTTAGTGGAATTTT CTACAAAAACATGTTATCTATAGATAATTTTGTTGCAAAATATGTTGACTATGACAAAGATTGTATGTAT ATACCTTTAATGTATTCTCA I I I I C I IATGTATTTATAATGGCAATGATGATACTGATGATATΠTAAGAT
GATGCCAGACCACAGGCTGATTTCTGCGTL I I I I GCCGAACGCAGTGCATGTGCGGTTGTTG I I I I I I GGAATAGTTTCAATTTTCGGACTGTCCGCTTTGATTTCAG I I I L I I GGCTTATTCAAAAAGCAAAGTAA
AGCCAAAAAAGCGAGATGGCAATACCAAATGCGGCAAAACGGTAGTGGAAGGAAAGGGGTGCGGGG
CAGCGGAAGGAAGGGTGGGGCGGGGCGTGGCGGGGTCTGTGGCTGGGCGCGACGTCACCGACGTT
GGAGCCACTCCTTTGACCATGTGTGCGTGTGTGTATTATTCGTGTCTCGCCACTCGCCGGTTGTTTTTT
TCTTTTTATCTCGCTCTCTCTAGCGCCATCTCGTACGCATGCTCAACGCACCGCATGTTGCCGTGTCCT
TTATGCGTCATΠTGGCTCGAAATAGGCAATTATTTAAACAAAGATTAGTCAACGAAAACGCTAAAATA
AATAAGTCTACAATATGGTTACTTATTGCCATGTGTGTGCAGCCAACGATAGCAACAAAAGCAACAACA
CAGTGGCTTTCCCTCTTTCAL I I I I I GTTTGCAAGCGCGTGCGAGCAAGACGGCACGACCGGCAAACG
CAATTACGCTGACAAAGAGCAGACGAAGTΠTGGCCGAAAAACATCAAGGCGCCTGATACGAATGCAT
TTGCAATAACAATTGCGATATTTAATATTGTTTATGAAGCTGTTTGACTTCAAAACACACAAAAAAAAAA
ATAAAACAAATTATTTGAAAGAGAATTAGGAATCGGACAGCTTATCGTTACGGGCTAACAGCACACCG
AGACGAAATAGCTTACCTGACGTCACAGCCTCTGGAAGAACTGCCGCCAAGCAGAGAGAGAGAGAAA
AAGAGGGAGAGCAGCTTAGACCGCATGTGCTTGTGTGTGAGGCGTCTCTCTCTTCGTCTCCTGTTTGC
GCAAACGCATAGACTGCACTGAGAAAATCGATTACCTA I I I I I I ATGAATGAATATTTGCACTATTACTA TTCAAAACTATTAAGATAGCAATCACATTCAATAGCCAAATACTATACCACCTGAGCGATGCAACGAAA TGATCAATTTGAGCAAAAATGCTGCATATTTAGGACGGCATCATTATAGAAATGL I I L I I GCTGTGTAC
TTTTCTCTCGTCTGGCAGCTGTTTCGCCGTTATTGTTAAAACCGGCTTAAGTTAGGTGTGTTTTCTACG
ACTAGTGATGCCCCTACTAGAAGATGTGTGTTGCACAAATGTCCCTGAATAACCAATTTGAAGTGCAG
ATAGCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAA
TAAACCCACTATAAACACATGTACATATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTG
TAAAAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAA
TTGAATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACAC
ACAAGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCAT
ACCCATATATGGTAAAAGTTΓTGAACGCGACTTGAGAGCGGAGAGCATTGCGGCTGATAAGGTΠTAG
CGCΓAAGCGGGCTTTATAAAACGGGCΓGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTG
CTGTGTGGATACTCCTCCCGACACAAAGCCGCTCCATCAGCCAGCAGTCGTCTAATCCAGAGACCCCG
GAT
SEQ ID NO: 5: pHP17 Truncated Actin5C_2, 1469 nt
GCATGCTCAACGCACCGCATGTTGCCGTGTCCΓTTATGCGTCATTTTGGCTCGAAATAGGCAATTATTT AAACAAAGATTAGTCAACGAAAACGCTAAAATAAATAAGTCTACAATATGGTTACTTATTGCCATGTGT
GTGCAGCCAACGATAGCAACAAAAGCAACAACACAGTGGCTTTCCCTCTTTCAL I I I I I GTTTGCAAGC
GCGTGCGAGCAAGACGGCACGACCGGCAAACGCAATTACGCTGACAAAGAGCAGACGAAGTTTTGGC
CGAAAAACATCAAGGCGCCΓGATACGAATGCATTTGCAATAACAATTGCGATATTTAATATTGTTTATG
AAGCTGTTTGACTTCAAAACACACAAAAAAAAAAATAAAACAAATTATTTGAAAGAGAATTAGGAATCG
GACAGCTTATCGTTACGGGCTAACAGCACACCGAGACGAAATAGCTTACCTGACGTCACAGCCTCTGG
AAGAACTGCCGCCAAGCAGAGAGAGAGAGAAAAAGAGGGAGAGCAGCTTAGACCGCATGTGCTTGT
GTGTGAGGCGTCΓCTCTCTTCGTCTCCTGTTTGCGCAAACGCATAGACTGCACTGAGAAAATCGATTA
CCTA I I I I I LATGAATGAATATTTGCACTATTACTATTCAAAACTATTAAGATAGCAATCACATTCAATAG
CCAAATACTATACCACCTGAGCGATGCAACGAAATGATCAATTTGAGCAAAAATGCTGCATATTTAGGA
CGGCATCATTATAGAAATGC I I L I I GCTGTGTAL I I I I CTCTCGTCTGGCAGCTGTTTCGCCGTTATTG
TTAAAACCGGCTTAAGTTAGGTGTGTTTTCTACGACTAGTGATGCCCCTACTAGAAGATGTGTGTTGCA
CAAATGTCCCTGAATAACCAATTTGAAGTGCAGATAGCAGTAAACGTAAGCTAATATGAATATTATTTA ACTGTAATGTTTTAATATCGCTGGACATTACTAATAAACCCACTATAAACACATGTACATATGTATGTTT
TGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAAAAGCACCGTGACCATCACAGCATAAAGATAAC
CAGCTGAAGTATCGAATATGAGTAACCCCCAAATTGAATCACATGCCGCAACTGATAGGACCCATGGA
AGTACACTCTTCATGGCGATATACAAGACACACACAAGCACGAACACCCAGTTGCGGAGGAAATTCTC
CGTAAATGAAAACCCAATCGGCGAACAATTCATACCCATATATGGTAAAAGTTTTGAACGCGACTTGA
GAGCGGAGAGCATTGCGGCTGATAAGGTTTTAGCGCTAAGCGGGCTTTATAAAACGGGCTGCGGGAC
CAGTTTTCATATCACΓACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACAAAGCCGCTCC
ATCAGCCAGCAGTCGTCTAATCCAGAGAC
SEQ ID NO: 6: pHP18 Truncated Actin5C_3, 612 nt
CTAGTGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCA
GATAGCAGTAAACGTAAGCΓAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTA
ATAAACCCACTATAAACACATGTACATATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGT
GTAAAAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAA
ATTGAATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACA
CACAAGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCA
TACCCATATATGGTAAAAGTTTTGAACGCGACTTGAGAGCGGAGAGCATTGCGGCTGATAAGGTTTTA
GCGCTAAGCGGGCΓTTATAAAACGGGCΓGCGGGACCAGTTTTCATATCACΓACCGTTTGAGTTCTTGT
GCTGTGTGGATACTCCTCCCGACACAAAGCCGCTCCATCAGCCAGCAGTCGTCTAATCCAGAGAC
SEQ ID NO: 7: pOPIE2
GTCATGATGATAAACAATGTATGGTGCrAATGTTGCrTCAACAACAATTCTGTTGAACTGTGTTTTCAT
GTTTGCCAACAAGCACCTTrATACrCGGTGGCCTCCCCACCACCAACTTTTTTGCACTGCAAAAAAACA
CGL I I I I GCACGCGGGCCCATACATAGTACAAACTCTACGTTTCGTAGACTATTTTACATAAATAGTCT
ACACCGTTGTATACGCTCCAAATACACTACCACACATTGAACL I I I I I GCAGTGCAAAAAAGTACGTGT
CGGCAGTCACGTAGGCCGGCCTTATCGGGTCGCGTCCTGTCACGTACGAATCACATTATCGGACCGG
ACGAGTGTTGTCTTATCGTGACAGGACGCCAGCTTCCTGTGTTGCTAACCGCAGCCGGACGCAACTCC
TTATCGGAACAGGACGCGCCTCCATATCAGCCGCGCGTTATCTCATGCGCGTGACCGGACACGAGGC
GCCCGTCCCGCTTATCGCGCCTATAAATACAGCCCGCAACGATCTGGTAAACACAGTTGAACAGCATC
TGTT
SEQ ID NO: 8: Gypsy insulator from (Pubmed: gi|122373O6:1188-1574 Stinger GFP transformation vector)
TCACGTAATAAGTGTGCGTTGAATTTATTCGCAAAAACATTGCATATTTTCGGCAAAGTAAAATTTTGTT GCATACCTTATCAAAAAATAAGTGCTGCATAL I I I I I AGAGAAACCAAATAA I I I I I I ATTGCATACCCG
1111 iAATAAAATACATTGCATACccTLi I I IAATAAAAAATATTGCATACTTTGACGAAACAAATΠTCG
TTGCATACCCAATAAAAGATTATTATATTGCATACCCG I I I I I AATAAAATACATTGCATACCCTCTTTTA ATAAAAAATATTGCATACGTTGACGAAACAAATTTTCGTTGCATACCCAATAAAAGATTATTATATTGCA TACL I I I I L I I GCCATACCATTTAGCCGATCAATT
Primer list Name Oligo Sequence SEQ ID NO:
2007 CGCTCAGTGGAACGAAAACTCACG 9
4003 AAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTA 10 ATACAAGGGGTGTTCATAGTATAATACGACTCACTATAGGAGGGCCAC CATGGCCAAGTTGAC
4004 GCAGACAGTTTTATTGTTCATGACCAAAATCCCTTGCAGAGATCCGAAT 11 TAATTCG
4009 CACCCAGGCCAGGGTGTTGTCCGGC 12
4032 GTTTTATTGTTCATGACCAAAATCCC 13
4035 GCGCCTCGAATGTTCGCGAACTTAAGAGCGCCGGAGTATAAATAG 14
4036 CTATTTATACTCCGGCGCTCTTAAGTTCGCGAACATTCGAGGCGC 15
4037 GTAAAAGTTTTGAACGCGACTTAAGGAGAGCGGAGAGCATTGCGG 16 Name Oligo Sequence SEQ ID NO:
4038 CCGCAATGCTCTCCGCTCTCCTTAAGTCGCGTTCAAAAC I I I I AC 17
590 TTCACTGCATTCTAGTTGTGG 18
917 CTAAGATTTAGTCAGATATCG 19
975 CATCAATGTATCTTATCATGTCTGCTAGCGGATCATGATGATAAACAAT 20 GT
976 ACATTGTTTATCATCATGATCCGCTAGCAGACATGATAAGATACATTGA 21 TG
979 TCTGCTAGCTAAAAAAAATCATGAATGGC 22
980 CCAAGCTTGTCTCTGGATTAGACGACTG 23
981 TGCTAGCCTCGAGAAATTTCTCTGGC 24
982 CCAAGCTTCTGCAGATTGTTTAGCTTG 25
986 AGAATTCAGCTGAGCTCGAGGGTACCAAGC 26
987 GGTTTGTCCAAACTCATCAATGTAT 27 990 TTATTGCCATGTGTGTGCAG 28
992 CGATGCAACGAAATGATCAA 29
993 GGCTGATAAGGTTTTAGCGCTA 30
994 CAAATTATTTGAAAGAGAATTAG 31
995 GTTTTAATATCGCTGGACATTAC 32
SEQ ID NO: 33: pAC5.1 act in promoter (2516bp) sequence:
TAAAAAAAATCATGAATGGCATCAACTCΓGAATCAAATCTTTGCAGATGCACCTACTTCTCATTTCCACT
GTCACATCA I I I I I CCAGATCTCGCTGCCTGTTATGTGGCCCACAAACCAAGACACGTTTTATGGCCAT TAAAGCTGGCTGATCGTCGCCAAACACCAAATACATATCAATATGTACATTCGAGAAAGAAGCGATCA AAGAAGCGTCTTCGGGCGAGTAGGAGAATGCGGAGGAGAAGGAGAACGAGCTGATCTAGTATCTCTC CACAATCCAATGCCAACTGACCAACTGGCCATATTCGGAGCAATTTGAAGCCAATTTCCATCGCCTGG
CGATCGCTCCATTCTTGGCTATATG I I I I I CACCGTTACCCGGGGCCATΠTCAAAGACTCGTCGGCAA GATAAGATTGTGTCACΓCGCTGTCTCTCTTCATTTGTCGAAGAATGCTGAGGAATTTCGCGATGACGTC GGCGAGTATΓTTGAAGAATGAGAATAATTTGTATTTATACGAAAATCAGTTAGTGGAATTTTCTACAAA AACATGTTATCTATAGATAATTTTGTTGCAAAATATGTTGACTATGACAAAGATTGTATGTATATACCTT
TAATGTATTCTCA I I I I C I I ATGTATTTATAATGGCAATGATGATACTGATGATATTTTAAGATGATGCC AGACCAAAAGGCTTGAATTTCTGCGTL I I I I GCCGAACGCAGTGCATGTGCAATTGTTG I I I I I I GGAA TATTCAATTTTCGGACTGTCCGCTTTGATTTCAG I I I C I I GGCTTATTCAAAAAGCAAAGTAAAGCCAAA AAAGCGAGATGGCAATACCAAATGCGGCAAAACGGTAGTGGAAGGAAAGGGGTGCGGGGCAGCGGA AGGAAGGGTGGGGCGGGGCGTGGCGGGGTCTGTGGCTGGGCGCGACGTCACCGACGTTGGAGCCA CTCCTTTGACCATGTGTGCGTGTGTGTATTATTCGTGTCTCGCCACTCGCCGGTTG I I I I I I I C I I I I I A TGCTGCGCTCTCTCTAGCGCCATCTCGCTTACGCATGCTCAACGCACCGCATGTTGCCGTTTCC I I I I A TGCGTCATTTTGGCTCGAAATAGGCAATTATTTAAACAAAGATTAGTCAACGAAAACGCTAAAATAAAT AAGTCTACAATATGGTTACTTATTGCCATGTGTGTGCAGCCAACGATAGCAACAAAAGCAACAACACA GGTGGCTTTCCCTCTTTCACI I I I I GTTTGCAAGCCGCGTGCGAGCAAGACGGCACGACCGGCAAACG
CAATTACGCTGACAAAGAGCAGACGAAGTTTTGGCGAAAAACATCAAGGCGCCTGATACGAATGCATT
TGCAATAACAATTGCGATATTTAATATTGTTTATGAAGCTGTTTGACTTCAAAACACACAAAAAAAAAAA
TAAAACAAATTATTTGAAAGAGAATTAGGAATCGGACGCTTATCGTTAGGGTAACAACAAGAAATGCTT
ACTGAGTCACAGCCTCTGGAAAACTGCCGCAAGCCAGAGAGAGAGAGAAAAAGAGGGAGAGCAGCT
TAGACCGCATGTGCΓTGTGTGTGAGGCGTCTCTCTCTTCGTCTCTGTTGCGCAAACGCATAGACTGCA
CTGAAAAAATCGATTACCTAI I I I I I ATGAATGAATATTTGCACTATTACTATTCAAAACTATTAAGATA
GCAATCACATTCAATAGCCAAATACTATACCACCTGAGCGATGCAACGAAATGATCAATTTGAGCAAAA
ATGCTGCATATTTAGGACGGCATCATTATAGAAATGCTTCTTGCTGTGTAC I I I I CTCTCGTCTGGCAG
CTGTTTCGCCGTTATTGTTAAAACCGGCΓTAAGTTAGGTGTGTTTTCTACGACTAGTGAATGCCCTACT AGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATAGCAGTAAACGTAA
GCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAAACCCACTATAAAC
ACATGTACATATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAAAAGCACCGTGAC
CATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTGAATCACATGCCG
CAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACAAGCACGAACACC
CAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACCCATATATGGTAA
AAGTTTTGAACGCGACrTGAGAGCGGAGAGCATTGCGGCTGATAAGGTTTTAGCGCTAAGCGGGCTT
TATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCTGTGTGGATACTCC
TCCCGACACAAAGCCGCTCCATCAGCCAGCAGTCGTCTAATCCAGAGAC
SEQ ID NO: 34: pHP15c_su(hw) vector:
CATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCCGTTCCGGTGCTC
ACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTCTCCCGGGACTTC
GTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGCGCGGTCCAGGAC
CAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGAGCTGTACGCCGAG
TGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGACCGAGATCGGCGAG
CAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGCACTTCGTGGCCGAG
GAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACGGGTCCCAGGGGGG
TCGACCTCGAAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCAC
AAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGTC
TGCTAGCTCACGTAATAAGTGTGCGTTGAATTTATTCGCAAAAACATTGCATATTTTCGGCAAAGTAAA
ATTTTGTTGCATACCTTATCAAAAAATAAGTGCTGCATACI I I I I AGAGAAACCAAATAA I I I I I IATTG
CATACCCG I I I I I AATAAAATACATTGCATACCCTL I I I I AATAAAAAATATTGCATACTTTGACGAAAC AAATTTTCGTTGCATACCCAATAAAAGATTATTATATTGCATACCCG I I I I I AATAAAATACATTGCATA CCCTCTTTTAATAAAAAATATTGCATACGTTGACGAAACAAATTTTCGTTGCATACCCAATAAAAGATTA
TTATATTGCATACL I I I I L I I GCCATACCATTTAGCCGATCAATTCTCGAGAAATTTCTCTGGCCGTTAT TCGTTATTCTCTL I I I I L I I I I I GGGTCTCTCCCTCTCTGCACTAATGCTCTCTCACTCTGTCACACAGT
AAACGGCATACTGCTCTCGTTGGTTCGAGAGAGCGCGCCTCGAATGTTCGCGAAAAGAGCGCCGGAG TATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCAATTCAAACAAGCAAAGTGAACACGTCGCTA AGCGAAAGCTAAGCAAATAAACAAGCGCAGCTGAACAAGCTAAACAATCTGCAGAAGCTTGGTACCCT CGAGCTCAGCTGMTTCTGGATCCTCTAGACCGGTCATATGCGGCCGCGGATCGATCGATATCTGACT AAATCΓΓAGTTTGTATTGTCATGTTTTAATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAA
AATAATTTCAAL I I I I ATTGTAACAACATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATG
CTCTCACGTMTMGTGTGCGTTGMTTTATTCGCAAAMCATTGCATATTTTCGGCAMGTMMTTTT
GTTGCATACCTTATCAAAAAATAAGTGCTGCATAL I I I I I AGAGAAACCAAATAA I I I I I I ATTGCATAC
CCG I I I I IAATAAAATACATTGCATACCCTL I I I I AATAAAAAATATTGCATACTTTGACGAAACAAATTT
TCGTTGCATACCCAATAAAAGATTATTATATTGCATACCCG I I I I I AATAAAATACATTGCATACCCTCT
TTTAATAAAAAATATTGCATACGTTGACGAAACAAATTTTCGTTGCATACCCAATAAAAGATTATTATAT
TGCATACCTTTTCTTGCCATACCATTTAGCCGATCAATTACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGT
GCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGG
CGCTTTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGT
GTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTA
GGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGG I I I I I I I GTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAA
GATCCTTTGATLi I I I CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATΠTGCA
TGCGCTMGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTG TGCTGTGTGGATACTCCTCCCGACACCGAATTAATTCGGATCTCTGCAAGGGATTTTGGTCATGAACA ATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTT
SEQ ID NO: 35: pHP15c vector:
CATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCCGTTCCGGTGCTC ACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTCTCCCGGGACTTC
GTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGCGCGGTCCAGGAC
CAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGAGCTGTACGCCGAG
TGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGACCGAGATCGGCGAG
CAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGCACTTCGTGGCCGAG
GAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACGGGTCCCAGGGGGG
TCGACCTCGAAACΓTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCAC
AAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGTC
TGCTAGCCTCGAGAAATTTCTCTGGCCGTTATTCGTTATTCTCTL I I I I L I I I I I GGGTCTCTCCCTCTC
TGCACTAAfGCTCTCTCACTCTGTCACACAGTAAACGGCATACTGCTCTCGTTGGTTCGAGAGAGCGC
GCCTCGAATGTTCGCGAAAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATT
CAATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAAACAAGCGCAGCTGAAC
AAGCTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGGATCCTCTAGACCGGTC
ATATGCGGCCGCGGATCGATCGATATCTGACTAAATCTTAGTTTGTATTGTCATGTTTTAATACAATAT
GTTATGTTTAAATATG I I I I I AATAAATTTTATAAAATAATTTCAAL I I I I ATTGTAACAACATTGTCCATT
TACACACTCCTTTCAAGCGCGTGGGACTCGATGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAA
TCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAG
GCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTG
CGCTCTCCTGTTCCGACCCTGCCGCRTACCGGATACCRGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTG
TGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCG
GTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATC
TGCGCTCTGCTGAAGCCAGTTACCΓTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGG I I I I I I I GTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAG ATCCTTTGATL I I I I CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGCAT GCGCTAAGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGT GCTGTGTGGATACTCCTCCCGACACCGAATTAATTCGGATCTCTGCAAGGGATTTTGGTCATGAACAA TAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTT
SEQ ID NO: 36: ACTIN 5C CORE PROMOTER FROM PHPlO CORRESPONDING TO NT 478 TO NT 572 OF SEQ ID NO:6:
TAGCGCTAAGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTT GTGCTGTGTGGATACTCCTCCCGACAC
SEQ ID NO: 37: HSP70 CORE PROMOTER
GAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCAATTCAAACAAGCAAAGTG AACACGTCGCTAAGCGAAAGCTA
SEQ ID NO: 38: HIS-tag sequence according to the invention:
ATGAAACACCAACACCAACATCAACATCAACATCAACATCAA
SEQ ID NO: 39: The 72bp element sequence with Xbal and Notl restriction sites (boxed)
TG(^CTAGAIATGCTTTGCATACTTCTGCCTGCTGGGGAGCCTGGGGACTTTCCACACCCTAACTGACA CACATTCCACAGCTGGTTiGCGGCCGCTTTTA
SEQ ID NO: 40: PRE sequence of HBV with Xbal and Notl restriction sites (boxed) (SEQ ID 40):
TGdTCTAGAlCGTGGAACCTTTGTGGCTCCTCTGCCGATCCATACTGCGGAACTCCTAGCCGCTTGTTT
TGCTCGCAGCCGGTCTGGAGCAAAGCTCATCGGAACTGACAATTCTGTCGTCCTCTCGCGGAAATATA
CATCGTTTCCATGGCTGCTAGGCTGTACTGCCAACTGGATCCTTCGCGGGACGTCCTTTGTTTACGTC
CCGTCGGCGCTGAATCCCGCGGACGACCCCTCGCGGGGCCGCTTGGGACTCTCTCGTCCCCTTCTCC
GTCTGCCGTTCCAGCCGACCACGGGGCGCACCTCTCTTTACGCGGTCTCCCCGTCTGTGCCTTCTCAT CTGCCGGTCCGTGTGCACTTCGCTTCACCTCTGCACGTTGCATGGAGACCACCGTGAACGCCCATCAG ATCCTGCCCAAGGTCTTACATAAGAGGACTCTTGGACTCCCAGCAATGTCAACGACCGACCTTGAGGC CTACTTCAAAGACTGTGTGTTTAAGGACTGGGAGGAGCTGGGGGAGGAGATTAGGTTAAAGGTCTTT GTATTAGGAGGCTGTATGCATAAATTGGTCTGlGCGGCCGCfπTA
Figure imgf000065_0001
SEQ ID NO: 58: VECTOR PHP34S (CREATED FROM SYNTHETIC DNA):
AAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTGAATCACATGCCGCAACTGATAGG
ACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACAAGCACGAACACCCAGTTGCGGAG
GAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACCCATATATGGTAAAAGTTTTGAACG
CGACΓTAAGGAGAGCGGAGAGCATTGCGGCTGATAAGGTTTTAGCGCTAAGCGGGCTTTATAAAACG
GGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACA
CAAAGCCGCTCCATCAGCCAGCAGTCGTCTAATCCAGAGACAAGCTTGGTACCCTCGAGCTCAGCTGA
ATTCTGGATCCTCTAGACCGGTCATATGCGGCCGCGGATCGATCGATATCTGACTAAATCTTAGTTTGT
ATTGTCATGTTTTAATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAAAATAATTTCAACTT
TTATTGTAACAACATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCTCGGCGCCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGC
CAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCA
GGCGTTTCCCCCΓGGAAGCΓCCCΓCGTGCGCΓCΓCCΓGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCRCCCTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGGTG
TAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGT
AACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTT
GGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG I I I I I I I GTTTGCAAGCAGCAGAT TACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATL I I I I CTACGGGGTCTGACGCTCAGTGGA ACGAAAACTCACGTTAAGGGATTTTGCATGCGCTAAGCGGGCTTTATAAAACGGGCTGCGGGACCAG TTTTCATATCA(^ACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACCGAATTAATTCGGA
TCTCΓGCAAGGGATΠTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGT TCATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCCGTTCCGGTGCT CACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTCAGCCGGGACTT CGTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGCGCGGTCCAGGA
CCAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGAGCTGTACGCCGA
GTGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGACCGAGATCGGCGA
GCAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGCACTTCGTGGCCGA
GGAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACGGGTCCCAGGGGG
GTCGACCTCGAAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCA
CAAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGT
CTTCACGTAATAAGTGTGCGGCTAGCAGTCAACTACTAGTGAATGCCCTACTAGAAGATGTGTGTTGC
ACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATAGCAGTAAACGTAAGCTAATATGAATATTAT
TTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAAACCCACTATAAACACATGTACATATGTATG
TTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAAAAGCACCGTGACCATCACAGCAT
SEO ID NO: 59: MATRIX ATTACHMENT REGION SEQUENCE (NAMED HSAR IN VECTOR MAPS):
CTAGAATATTCGCTTTATTTTGGAAA I I IC I I I ATAAATACGGCTGCTTAAGTTAATTATGTTAGAGATA
ATCGAAGGGTTTGTTACGCGGATGTTGTCCGCCAGAAAGGCCTATGGAACTTTGACAAGATATTCTTA AAAATGTATTTACATACTAACΓTAAAAAAGCTATTTATTTATTAGATTAATACAGACAATTGCATGCAGA
TGATTGTTAGTG I I I I I I ATTTAAAATTACGTAAAGGTTGTCAAGACTGTTGTTGTCAACTGTTTACACT GTGAAATAAGTTGAA I I I I I CGCTTTAAAGGTAAATATGAAGG I I I C I I I GCTTAATTAAACGCAATTTT TTTATTCAATATAAACAATATTTATTTTACTTATAAATCAAAAACAAATTAAAAATATTAAATATACAAGA AAATAAACAACAAATTCCAAGTTTGCACAL I I I I GAGTCTATATATAAACGTTAGAAGATCACACAGATT TACATATGTATGTACATATGTACTTATGCATGCAAAAGCATATGCAAAAACCGTGTCTTTTATGAAAACT AAAGTTAAATAAAGTTAAATACTAAGATATATGTA I I I I I GAATL I I I I I ATTGCAGGAAGGGATATTGA
ACTACATACATATACATACATACATATGTATGTACTTGTACATTTGTAAGCGCGGTATTTACATTTAAAC CAATTAAAATΠTGTATAATCTGGGAGCTTTACAGA I I I I I GGGATGGTTACAACTCAAAGGGGCGTGG CAATGTAAATAAAATCTGTTCTGGTTATAATGTGTACATATTCΓGTCTCAACTTTCTAAGGCATATGTAT AAATACATACATAATATATGTATATGTATATATGTACATACATATGTACATATGTAAATATTTAATTCAAT GAATCTACGGCTATAAAAATAATAGGCTTGCCTCATTGACTGGAGCTATCCGCATAAGCAACATATGTA CATACATACATACATATGTAAAAAAAAGTAGCAACTAAATTCTAATACATTTTCCG
SEQ ID NO: 60: INTRON (NAMED INTRN IN VECTOR MAPS) WITH SACI AND CCORI
DIGESTION SITES (UNDERLINED) ON EITHER END:
GAGCTCGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAAACTGGGCTTGTCGAGAC AGAGAAGACTCTTGCGTTTCΓGATAGGCACCTATTGGTCTTACTGACATCCACΓTTGCCTTTCTCTCCA CAGGAATTC
SEO ID NO: 61: HA (MODIFIED H5N1 VIETNAM^ SEQUENCE IN VECTORS (INSERTED BETWEEN UNDERLINED FCORI AND NOTL SITESΪ:
GAATRCGCCACCATGAAGCTGTGCATCCTGCTGGCCGTGGTGGCCTTCGTGGGCCTGAGCCTGGGCA
TGAAGCACCAACATCAGCACCAGCACCAACATCAACACCAGGGTCCAGGTGCCAAGTTCGTGGCCGC
TTGGACCCTGAAGGCCGCCGCCGATCAGATCTGCATTGGATACCACGCCAACAACAGCACCGAGCAG
GTGGACACCATCATGGAGAAGAACGTGACCGTGACCCACGCCCAGGACATTCTGGAGAAGAAGCACA
ACGGCAAGCTGTGCGATCTGGATGGCGTGAAGCCCCTGATCCTGCGCGATTGCAGCGTGGCCGGCT
GGCTGCTGGGCAACCCCATGTGCGATGAGTTCATCAACGTGCCCGAGTGGAGCTACATCGTGGAGAA
GGCCAACCCCGTGAACGATCTGTGCTACCCCGGCGATTTCAACGATTACGAGGAGCTGAAGCACCTG
CTGTCCCGCATCAACCACTTCGAGAAGATCCAGATCATCCCCAAGAGCAGCTGGTCCAGCCACGAGG
CTAGCCTGGGCGTGAGCAGCGCCTGCCCGTACCAGGGCAAGTCCAGL I I L I I CCGCAACGTGGTGTG
GCTGATCAAGAAGAACAGCACCTACCCCACCATCAAGCGCAGCTACAACAACACCAACCAGGAGGAT
CTGCTGGTGCTGTGGGGCATCCACCACCCCAACGATGCCGCCGAGCAGACCAAGCTGTACCAGAACC
CCACCACCTACATCAGCGTGGGCACCTCCACCCTGAACCAGCGCCTGGTGCCCCGCATTGCCACCCG
CAGCAAGGTGAACGGCCAGTCGGGCCGCATGGAGTTCTTTTGGACCATCCTGAAGCCCAACGACGCC
ATCAACTTCGAGAGCAACGGCAACTTCATCGCCCCCGAGTACGCCTACAAGATCGTGAAGAAGGGCG
ATAGCACCATCATGAAGAGCGAGCTGGAGTACGGCAACTGCAACACCAAGTGCCAGACCCCCATGGG
CGCCATCAACAGCAGCATGCCCTTCCACAACATCCACCCCCTGACCATCGGCGAGTGCCCCAAGTACG
TGAAGAGCAACCGCCTGGTGCTGGCCACCGGCCTGCGCAACAGCCCACAGCGCGAGCGCCGCCGCA AGAAGCGCGGCCTGTTCGGCGCCATCGCCGGCTTCATCGAGGGCGGCTGGCAGGGCATGGTGGATG
GCTGGTACGGCTACCACCACTCGAACGAGCAGGGCAGCGGCTACGCCGCCGATAAGGAGTCGACCC
AGAAGGCCATCGATGGCGTGACCAACAAGGTGAACAGCATCATCGACAAGATGAACACCCAGTTCGA
GGCCGTGGGCCGCGAGTTCAACAACCTGGAGCGCCGCATCGAGAACCTGAACAAGAAGATGGAGGA
CGGCTTCCTGGATGTGTGGACCTACAACGCCGAGCTGCTGGTGCTGATGGAGAACGAGCGCACCCTG
GATTTCCACGATAGCAACGTGAAGAACCTGTACGATAAGGTGCGCCTGCAGCTGCGCGATAACGCCA
AGGAGCTGGGCAACGGCTGCTTCGAGTTCTACCACAAGTGCGACAACGAGTGCATGGAGAGCGTGC
GCAACGGCACCTACGATTACCCCCAGTACAGCGAGGAGGCCCGCCTGAAGCGCGAGGAGATCAGCT
CCGGCCGCCTGGTGCCACGCGGCAGCCCAGGCTCCGGCTACATCCCCGAGGCCCCACGCGATGGCC
AGGCCTACGTGCGCAAGGATGGCGAGTGGGTGCTGCTGTCCACCTTCCTGTAATAAGCGGCCGC
SEO ID NO: 62: KANAMYCIN /GENETICIN (G418Ϊ EXPRESSION CASSETTE INSERTED BETWEEN UNDERLINED XMNl AND SALl SITES:
GAATTAATTCGGATCTCTGCAAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTA
ATACAAGGGGTGTTCATAGTATAATACGACTCACTATAGGAGGGCCACCATGAGCCACATCCAGCGCG
AAACCAGCTGCAGCCGTCCGCGCCTGAACAGCAACATGGATGCCGATCTGTACGGCTACAAATGGGC
CCGCGATAACGTGGGCCAGAGCGGCGCTACCATCTACCGCCTGTACGGCAAACCGGATGCCCCGGA
ACTGTTCCTGAAACACGGCAAAGGCAGCGTGGCCAACGATGTGACCGATGAAATGGTGCGCCTGAAC
TGGCTGACCGAGTTCATGCCGCTGCCGACCATCAAACACTTCATCCGCACCCCGGATGATGCCTGGCT
GCTGACCACCGCCATTCCGGGCAAAACCGCCTTCCAGGTGCTGGAAGAATACCCGGATAGCGGCGAA
AACATCGTGGATGCCCTGGCCGTGTTCCTGCGCCGCCTGCACAGCATCCCGGTGTGCAACTGCCCGT
TCAACAGCGATCGCGTGTTCCGCCTGGCTCAGGCCCAGAGCCGCATGAACAACGGCCTGGTGGATGC
CAGCGATTTCGATGATGAACGCAACGGCTGGCCGGTGGAACAGGTGTGGAAAGAGATGCACAAACTG
CTGCCGTTCAGCCCGGATTCCGTGGTGACCCACGGCGATTTCAGCCTGGATAACCTGATCTTCGATGA
GGGCAAACTGATCGGCTGCATCGATGTGGGCCGCGTGGGCATTGCCGATCGCTACCAGGATCTGGCC
ATCCTGTGGAACTGCCTGGGCGAGTTCAGCCCGAGCCTGCAGAAACGCCTGTTCCAGAAGTACGGCA
TCGATAACCCGGATATGAACAAACTGCAGTTCCACCTGATGCTGGATGAGTTCTTCTAATAAGICGAC
SEQ ID NO: 63: pKanR sequence used according to the present examples:
AAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTTCATAGT ATAATACGACTCACTATAGGAGGGCC
PCR primers for pHP34s constructs:
GCGAACTTAAGAGCGCCGGAGTATAAATAG (SEQ ID NO: 64) CCAAGCTTCTGCAGATTGTTTAGCTTG (SEQ ID NO: 65) GGTTTGTCCAAACTCATCAATGTAT (SEQ ID NO: 66) TATACTCCGGCGCTCTTAAGTTCGCTCGCGTTCAAAAC I I I I ACC (SEQ ID NO: 67)
SEQ ID NO: 68: Hybrid promoter sequence (with Spel (upstream) and HindIII (downstream) restriction sites, both underlined)
ACTAGIGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGC
AGATAGCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACT
AATAAACCCACTATAAACACATGTACATATGTATGTΠTGGCATACAATGAGTAGTTGGGGAAAAAATG
TGTAAAAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCA
AATTGAATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACAC
ACACAAGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTC
ATACCCATATATGGTAAAAGTTTTGAACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGC
TTCGTCTACGGAGCGACAATTCAATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCA
AATAAACAAGCGCAGCTGAACAAGCTAAACAATCTGCAGAAGCΓΓ
SEQ ID NO: 69: Sequence pLIC-Ex-Hisl (LIC enabled pHP34s-Hybrid for extracellular expression using BIP signal sequence)
CCTGTTCACTGACTCCCGCGGATCAAAAATGACGATTGACGGCATTACGTCTAACGATATTTACATGCT TGGTTATGTTTCTAATTCTTTAACTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAAT
GGATCTTGATCCTAACGATGTAACCTTTACTTACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAA
TGTCGTGATTACAAGCTATATGACAAACAGAGGATTCTACGCAGACAAACAATCAACGTTTGCGCCTA
GCTTCCTGCTGAACATCAAAGGCAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAA
TTAACAGTTAACAAATAAAAACGCAAAAGAAAATGCCGATATCCTATTGGCATTGACGTCAGGTGGCA
CACCTGCAGAGAACCTCTACTTCCAATCGCACCATCATCACCACCATGATTACAAGGATGACGACGAT
AAGTGAGGATCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCCGCGGATCGATCGATATCTGACTAA
ATCrrAGTTTGTATTGTCATGTTTTAATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAAAA
TAATTTCAAC I I I I ATTGTAACAACATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCT
CGGCGCCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTA
TAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG I I I I I I I GTTTGC
AAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATL I I I I CTACGGGGTCTGA
CGCΓCAGTGGAACGAAAACTCACGTTAAGGGATΠTGCATGCGCTAAGCGGGCTTTATAAAACGGGCT
GCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACCGA
ATTAATTCGGATCΓCTGCAAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAAT
ACAAGGGGTGTTCATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCC
GTTCCGGTGCTCACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTC
AGCCGGGACTTCGTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGC
GCGGTCCAGGACCAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGA
GCTGTACGCCGAGTGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGAC
CGAGATCGGCGAGCAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGC
ACTTCGTGGCCGAGGAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACG
GGTCCCAGGGGGGTCGACCTCGAAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGC
ATCACAAATTTCACAAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATG
TATCTTATCATGTCTTCACGTAATAAGTGTGCGGCTAGCAGTCAACTACTAGCAGTCAACACTTGGTCT
GACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTT
GCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAAT
GATACCGCGAGAACCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCC
GAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAG
AGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCAC
GCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCC
ATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGT
GTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGC I I I I C
TGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCC
CGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAAACGT
TCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTGC
ACCCAACTGATCTTCAGCATC I I I I ACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAA
ATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCC I I I I I CAATATT
ATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAAC
AAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTACTAGTGAATGCCCTACTAGAAGATGT
GTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATAGCAGTAAACGTAAGCTAATATG
AATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAAACCCACTATAAACACATGTACA
TATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAAAAGCACCGTGACCATCACAGC
ATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTGAATCACATGCCGCAACTGATA
GGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACAAGCACGAACACCCAGTTGCG
GAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACCCATATATGGTAAAAGTTTTGA
ACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCAAT
TCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAAACAAGCGCAGCTGAACAAG
CTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGGATCCTCTAGAAATAATΠTG
TTTAACCTTAAGAAGGAGATATACTCAAAATGAAGCTGTGCATACTGCTGGCCGTCGTGGCCTTTGTT GGCCTCTCGCTCGGGGAAGAGAAAAAGCTAAGCAGGTCGTTCACTATTATTΓAGTGAAATGAGATATT
ATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCCCATGCAACAGAAACTATAAAAAATACA
GAGAATGAAAAGAAACAGATAGAi I I I I I AGTTCTTTAGGCCCGTAGTCTGCAAATCL I I I I ATGATTTT
CTATCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAATAGAATGAGGTCGAAA
AGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGGCAAGACCTAAAATGTGTAAAGGGCAAAGTGTAT
ACTTTGGCGTCACCCCTTACATATRTTAGGTC I I I I I I IATTGTGCGTAACTAACTTGCCATCTTCAAAC
AGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGAGACATGAACGATGAACATCA
AAAAGTTTGCAAAACAAGCAACAGTATTAACCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAA
GCGTTTGCGAAAGAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTACACGCCA
TGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATAAAGTTCCTGAGTTCGATTCGTCCAC
AATTAAAAATATCTCTTCTGCAAAAGGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACG
GCACTGTCGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTAAAAATGCGGAT
GACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAAACTTCTATTGACAGCTGGAAAAACGCTGG
CCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAATGATTCTATCCTAAAAGACCAAACACAAGAAT
GGTCAGGTTCAGCCACATTTACATCTGACGGAAAAATCCGTTTATTCTACACTGATTTCTCCGGTAAAC
ATTACGGCAAACAAACACTGACAACTGCACAAGTTAACGTATCAGCATCAGACAGCTCTTTGAACATCA
ACGGTGTAGAGGATTATAAATCAATCTTTGACGGTGACGGAAAAACGTATCAAAATGTACAGCAGTTC
ATCGATGAAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTCACTACGTAGAAGATAA
AGGCCACAAATACTTAGTATTTGAAGCAAACACTGGAACTGAAGATGGCTACCAAGGCGAAGAATCTT
TATTTAACAAAGCATACTATGGCAAAAGCACATCATTCTTCCGTCAAGAAAGTCAAAAACTTCTGCAAA
GCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCGCTCTCGGTATGATTGAGCTAAACGATGATTAC
ACACTGAAAAAAGTGATGAAACCGCTGATTGCATCTAACACAGTAACAGATGAAATTGAACGCGCGAA
CGTCTTTAAAATGAACGGCAAATGGTA
SEQ ID NO: 70: Sequence pLIC-His-Int (LIC enabled pHP34s-Hybrid for intracellular expression):
CTAGCAGTCAACACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGT
CTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACC
ATCTGGCCCCAGTGCTGCAATGATACCGCGAGAACCACGCTCACCGGCTCCAGATTTATCAGCAATAA
ACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTAT
TAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTG
CTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCA
AGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGT
CAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCAT
GCCATCCGTAAGATGC I I I I CTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGC
GGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAA
AGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCA
GTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATC I I I I ACTTTCACCAGCGTTTCTGGGT
GAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACT
CATACTCTTCL I I I I I CAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTT
GAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTACTAG
TGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATA
GCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAA
ACCCACTATAAACACATGTACATATGTATGTΠTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAA
AAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTG
AATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACA
AGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACC
CATATATGGTAAAAGTTTTGAACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGT
CTACGGAGCGACAATTCAATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAA
ACAAGCGCAGCTGAACAAGCTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGG
ATCCTCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATCAAAATGCACCATCATCATCATCATTCT
TCTGGTGTAGATCTGGGTACCGAGAACCTGTACTTCCAATCCATGGAGACCGACGTCCACATATACCT
GCCGTTCACTATTATTTAGTGAAATGAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTT
ATGCCCATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGATTTTTTAGTTCTTT
AGGCCCGTAGTCTGCAAATCL I I I I ATGATTTTCTATCAAACAAAAGAGGAAAATAGACCAGTTGCAAT
CCAAACGAGAGTCTAATAGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACΓTTGGCGTCACCCCTTACATATΠTAGGTL I I I I TTTATTGTGCGTAACTAACTTGCCATCTTCAAACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGT
ACATAAAAAAGGAGACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAACCTTTA
CTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAAGAAACGAACCAAAAGCCATATAA
GGAAACATACGGCATTTCCCATATTACACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATG
AAAAATATAAAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAAGGCCTGGACG
TTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGTCGCAAACTATCACGGCTACCACATCGTC
TTTGCATTAGCCGGAGATCCTAAAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGC
GAAACTTCTATTGACAGCTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAA
TGATTCTATCCTAAAAGACCAAACACAAGAATGGTCAGGTTCAGCCACATTTACATCTGACGGAAAAAT
CCGTTTATTCTACACTGATTTCTCCGGTAAACATTACGGCAAACAAACACTGACAACTGCACAAGTTAA
CGTATCAGCATCAGACAGCTCTTTGAACATCAACGGTGTAGAGGATTATAAATCAATCTTTGACGGTG
ACGGAAAAACGTATCAAAATGTACAGCAGTTCATCGATGAAGGCAACTACAGCTCAGGCGACAACCAT
ACGCTGAGAGATCCTCACTACGTAGAAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACTGG
AACTGAAGATGGCTACCAAGGCGAAGAATCTTTATTTAACAAAGCATACTATGGCAAAAGCACATCATT
CTTCCGTCAAGAAAGTCAAAAACTTCTGCAAAGCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCG
CTCTCGGTATGATTGAGCTAAACGATGATTACACACTGAAAAAAGTGATGAAACCGCTGATTGCATCTA
ACACAGTAACAGATGAAATTGAACGCGCGAACGTCTTTAAAATGAACGGCAAATGGTACCTGTTCACT
GACTCCCGCGGATCAAAAATGACGATTGACGGCATTACGTCTAACGATATTTACATGCTTGGTTATGTT
TCTAATTCTTΓAACTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAATGGATCTTGAT
CCTAACGATGTAACCTTTACTTACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAATGTCGTGATT
ACAAGCTATATGACAAACAGAGGATTCTACGCAGACAAACAATCAACGTTTGCGCCTAGCTTCCTGCT
GAACATCAAAGGCAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAATTAACAGTTA
ACAAATAAAAACGCAAAAGAAAATGCCGATATCCTATTGGCATTGACGGTCTCCAGTAAAGGTGGATA
CGGATCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCCGCGGATCGATCGATATCTGACTAAATCTTA
GTTTGTATTGTCATGTTTTAATACAATATGTTATGTTTAAATATG i I I I I AATAAATΠTATAAAATAATTT
CAAL I I I IATTGTAACAACATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCTCGGCG CCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCA AAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCC CCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATCTCAGT TCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCC ACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAA AGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG I I I I I I I GTTTGCAAGCA GCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATC I I I I CTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATΠTGCATGCGCTAAGCGGGCTTTATAAAACGGGCTGCGG
GACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACCGAATTAA
TTCGGATCTCTGCAAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAG
GGGTGTTCATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCCGTTCC
GGTGCTCACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTCAGCCG
GGACTTCGTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGCGCGGTC
CAGGACCAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGAGCTGTAC
GCCGAGTGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGACCGAGATC
GGCGAGCAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGCACTTCGTG
GCCGAGGAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACGGGTCCCAG
GGGGGTCGACCTCGAAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAAT
TTCACAAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATC ATGTCTTCACGTAATAAGTGTGCGGCTAGCAGTCAA
SEQ ID NO: 71: Sequence pLIC-His-Ex (LIC enabled pHP34s-Hybrid for extracellular expression)
CTAGCAGTCAACACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGT
CTATTTCGTTCATCςATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACC
ATCTGGCCCCAGTGCTGCAATGATACCGCGAGAACCACGCTCACCGGCTCCAGATTTATCAGCAATAA
ACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTAT TAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTG
CTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCA
AGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGT
CAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCAT
GCCATCCGTAAGATGL I I I I CTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGC
GGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAA
AGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCA
GTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATC I I I I ACTTTCACCAGCGTTTCTGGGT
GAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACT
CATACTCTTCL I I I I I CAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTT
GAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTACTAG
TGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATA
GCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAA
ACCCACTATAAACACATGTACATATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAA
AAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTG
AATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACA
AGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACC
CATATATGGTAAAAGTTTTGAACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGT
CTACGGAGCGACAATTCAATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAA
ACAAGCGCAGCTGAACAAGCTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGG
ATCCΓCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATCAAAATGAAGCTGTGCATACTGCTGGC
CGTCGTGGCCTTTGTTGGCCTCTCGCTCGGGCACCATCATCATCATCATTCTTCTGGTGTAGATCTGG
GTACCGAGAACCTGTACTTCCAATCCATGGAGACCGACGTCCACATATACCTGCCGTTCACTATTATTT
AGTGAAATGAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCCCATGCAACAGA
AACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA I I I I I I AGTTCTTTAGGCCCGTAGTCTGCA
AATCL I I I I ATGATTTTCTATCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAA
TAGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGGCAAGACCTAAAATGTGT
AAAGGGCAAAGTGTATACTTTGGCGTCACCCCTTACATATTTTAGGTLI I I I I I I ATTGTGCGTAACTAA
CTTGCCATCTTCAAACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGAGACA
TGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAACCTTTACTACCGCACTGCTGGCA
GGAGGCGCAACTCAAGCGTTTGCGAAAGAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTT
CCCATATTACACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATAAAGTTCCTG
AGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAAGGCCTGGACGTTTGGGACAGCTGGCCA
TTACAAAACACTGACGGCACTGTCGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGA
TCCTAAAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAAACTTCTATTGACAG
CTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAATGATTCTATCCTAAAAG
ACCAAACACAAGAATGGTCAGGTTCAGCCACATTTACATCTGACGGAAAAATCCGTTTATTCTACACTG
ATTTCTCCGGTAAACATTACGGCAAACAAACACTGACAACTGCACAAGTTAACGTATCAGCATCAGACA
GCTCTTTGAACATCAACGGTGTAGAGGATTATAAATCAATCTTTGACGGTGACGGAAAAACGTATCAA
AATGTACAGCAGTTCATCGATGAAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTCA
CTACGTAGAAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACTGGAACTGAAGATGGCTACC
AAGGCGAAGAATCTTTATTTAACAAAGCATACTATGGCAAAAGCACATCATTCTTCCGTCAAGAAAGTC
AAAAACTTCTGCAAAGCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCGCTCTCGGTATGATTGAG
CTAAACGATGATTACACACTGAAAAAAGTGATGAAACCGCTGATTGCATCTAACACAGTAACAGATGA
AATTGAACGCGCGAACGTCTTTAAAATGAACGGCAAATGGTACCTGTTCACTGACTCCCGCGGATCAA
AAATGACGATTGACGGCATTACGTCTAACGATATTTACATGCTTGGTTATGTTTCTAATTCTTTAACTGG
CCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAATGGATCTTGATCCTAACGATGTAACCTT
TACTTACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAATGTCGTGATTACAAGCTATATGACAAA
CAGAGGATTCTACGCAGACAAACAATCAACGTTTGCGCCTAGCTTCCTGCTGAACATCAAAGGCAAGA
AAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAATTAACAGTTAACAAATAAAAACGCAAAA
GAAAATGCCGATATCCTATTGGCATTGACGGTCTCCAGTAAAGGTGGATACGGATCCGAATTCGAGCT
CCGTCGACAAGCTTGCGGCCGCGGATCGATCGATAT(CTGACTAAATCTTAGTTTGTATTGTCATGTTTT
AATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAAAATAATTTCAAC I I I I ATTGTAACAAC
ATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCTCGGCGCCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCC
AGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC CTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGC
TCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATC
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGA
AGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGG I I I I I I I GTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATCTCAAGAAGATCCTTTGATL I I I I CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCA
CGTTAAGGGATTTTGCATGCGCTAAGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCAC
TACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACCGAATTAATTCGGATCTCTGCAAGG
GATΠTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTTCATAGTATAA
TACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCCGTTCCGGTGCTCACCGCGCGC
GACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTCAGCCGGGACTTCGTGGAGGAC
GACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGCGCGGTCCAGGACCAGGTGGTG
CCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGAGCTGTACGCCGAGTGGTCGGAG
GTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGACCGAGATCGGCGAGCAGCCGTGG
GGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGCACTTCGTGGCCGAGGAGCAGGAC
TGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACGGGTCCCAGGGGGGTCGACCTCGA
AACITGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCACAAATAAAGCAT
I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGTCTTCACGTAATA
AGTGTGCGGCTAGCAGTCAA
SEQ ID NO: 72: Sequence pLJC-Int-Hisl (LJC enabled pHP34s-Hybrid for intracellular expression):
CCTGTTCACTGACTCCCGCGGATCAAAAATGACGATTGACGGCATTACGTCTAACGATATTTACATGCT
TGGTTATGTTTCTAATTCTTTAACTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAAT
GGATCTTGATCCTAACGATGTAACCΓTTACΠΓACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAA
TGTCGTGATTACAAGCTATATGACAAACAGAGGATTCTACGCAGACAAACAATCAACGTTTGCGCCTA
GCTTCCTGCTGAACATCAAAGGCAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAA
TTAACAGTTAACAAATAAAAACGCAAAAGAAAATGCCGATATCCTATTGGCATTGACGTCAGGTGGCA
CACCTGCAGAGAACCTCTACTTCCAATCGCACCATCATCACCACCATGATTACAAGGATGACGACGAT
AAGTGAGGATCCGAATTCGAGCTCCGTCGACAAGCTTGCGGCCGCGGATCGATCGATATCTGACTAA
ATCΠTAGTTTGTATTGTCATGTTTTAATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAAAA TAATTTCAAC I I I I ATTGTAACAACATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCT
CGGCGCCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGT
GAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTA
TAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCAATGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTG
GCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCG
GAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG I I I I I I I GTTTGC
AAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGCATGCGCTAAGCGGGCTTTATAAAACGGGCT
GCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCTGTGTGGATACTCCTCCCGACACCGA
ATTAATTCGGATCTCΓGCAAGGGATTTTGGTCATGAACAATAAAACTGTCTGCTTACATAAACAGTAAT
ACAAGGGGTGTTCATAGTATAATACGACTCACTATAGGAGGGCCACCATGGCCAAGTTGACCAGTGCC
GTTCCGGTGCTCACCGCGCGCGACGTCGCCGGAGCGGTCGAGTTCTGGACCGACCGGCTCGGGTTC
AGCCGGGACTTCGTGGAGGACGACTTCGCCGGTGTGGTCCGGGACGACGTGACCCTGTTCATCAGC
GCGGTCCAGGACCAGGTGGTGCCGGACAACACCCTGGCCTGGGTGTGGGTGCGCGGCCTGGACGA
GCTGTACGCCGAGTGGTCGGAGGTCGTGTCCACGAACTTCCGGGACGCCTCCGGGCCGGCCATGAC
CGAGATCGGCGAGCAGCCGTGGGGGCGGGAGTTCGCCCTGCGCGACCCGGCCGGCAACTGCGTGC
ACTTCGTGGCCGAGGAGCAGGACTGACCGACGCCGACCAACACCGCCGGTCCGACGGCGGCCCACG
GGTCCCAGGGGGGTCGACCTCGAAACTTGTTTATTGCAGCTTATAATGGTTACAAATAAAGCAATAGC
ATCACAAATTTCACAAATAAAGCA I I I I I I I CACTGCATTCTAGTTGTGGTTTGTCCAAACTCATCAATG TATCTTATCATGTCTTCACGTAATAAGTGTGCGGCTAGCAGTCAACTACTAGCAGTCAACACTTGGTCT GACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTT
GCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAAT
GATACCGCGAGAACCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCC
GAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAG
AGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCAC
GCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCC
ATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGT
GTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGC I I I I C
TGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCC
CGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAAACGT
TCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTGC
ACCCAACTGATCTTCAGCATCITTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAA
ATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCL I I I I L CAATATT
ATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAAC
AAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTACTAGTGAATGCCCTACTAGAAGATGT
GTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATAGCAGTAAACGTAAGCTAATATG
AATATTATTTAACTGTAATGTTTTAATATCGCTGGACATTACTAATAAACCCACTATAAACACATGTACA
TATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAAAAGCACCGTGACCATCACAGC
ATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTGAATCACATGCCGCAACTGATA
GGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACAAGCACGAACACCCAGTTGCG
GAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACCCATATATGGTAAAAGTTTTGA
ACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGTCTACGGAGCGACAATTCAAT
TCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAAACAAGCGCAGCTGAACAAG
CTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGGATCCTCΓAGAAATAATTTTG
TTTAACCTTAAGAAGGAGATACAAAGCAGGTCGTTCACTATTATTTAGTGAAATGAGATATTATGATAT
TTTCΓGAATTGTGATTAAAAAGGCAACTTTATGCCCATGCAACAGAAACTATAAAAAATACAGAGAATG
AAAAGAAACAGATAGA I I I I I I AGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTATCAA ACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAATAGAATGAGGTCGAAAAGTAAAT CGCGCGGGTTTGTTACTGATAAAGCAGGCAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGG CGTCACCCCTTACATATTTTAGGTC I I I I I I I ATTGTGCGTAACTAACTTGCCATCTTCAAACAGGAGGG
CTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGAGACATGAACGATGAACATCAAAAAGTTT
GCAAAACAAGCAACAGTATTAACCΠTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGC
GAAAGAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTACACGCCATGATATGC
TGCAAATCCCTGAACAGCAAAAAAATGAAAAATATAAAGTTCCTGAGTTCGATTCGTCCACAATTAAAA
ATATCΓCTTCTGCAAAAGGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGTC
GCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTAAAAATGCGGATGACACATC
GATTTACATGTTCTATCAAAAAGTCGGCGAAACTTCTATTGACAGCTGGAAAAACGCTGGCCGCGTCT
TTAAAGACAGCGACAAATTCGATGCAAATGATTCTATCCTAAAAGACCAAACACAAGAATGGTCAGGT
TCAGCCACATTTACATCTGACGGAAAAATCCGTTTATTCTACACTGATTTCTCCGGTAAACATTACGGC
AAACAAACACTGACAACTGCACAAGTTAACGTATCAGCATCAGACAGCTCTTTGAACATCAACGGTGT
AGAGGATTATAAATCAATCTTTGACGGTGACGGAAAAACGTATCAAAATGTACAGCAGTTCATCGATG
AAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTCACTACGTAGAAGATAAAGGCCA
CAAATACTTAGTATTTGAAGCAAACACTGGAACTGAAGATGGCTACCAAGGCGAAGAATCTTTATTTAA
CAAAGCATACTATGGCAAAAGCACATCATTCTTCCGTCAAGAAAGTCAAAAACTTCTGCAAAGCGATAA
AAAACGCACGGCTGAGTTAGCAAACGGCGCTCTCGGTATGATTGAGCTAAACGATGATTACACACTGA
AAAAAGTGATGAAACCGCTGATTGCATCTAACACAGTAACAGATGAAATTGAACGCGCGAACGTCΠT
AAAATGAACGGCAAATGGTA
SEQ ID NO: 73: Sequence pLIC-TEV-Ex-Hisl (LIC enabled pHP34s-Hybrid for extracellular expression)
TTCTCAATGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGC
ACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTA
AGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGC
GCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGG I I I I I I I GTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATC
CTTTGATC 1 1 1 1 CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATΠTGCATGCG CTAAGCGGGCTTTATAAAACGGGCTGCGGGACCAGTTTTCATATCACTACCGTTTGAGTTCTTGTGCT
GTGTGGATACTCCTCCCGACACCGAATTAATTCGGATCTCTGCAAGGGATΠTGGTCATGAACAATAA
AACTGTCTGCTTACATAAACAGTAATACAAGGGGTGTTCATAGTATAATACGACTCACTATAGGAGGG
CCACCATGGCCAAGTTGACCAGTGCCGTTCCGGTGCTCACCGCGCGCGACGTCGCCGGAGCGGTCG
AGTTCTGGACCGACCGGCTCGGGTTCAGCCGGGACTTCGTGGAGGACGACTTCGCCGGTGTGGTCC
GGGACGACGTGACCCTGTTCATCAGCGCGGTCCAGGACCAGGTGGTGCCGGACAACACCCTGGCCT
GGGTGTGGGTGCGCGGCCTGGACGAGCTGTACGCCGAGTGGTCGGAGGTCGTGTCCACGAACTTCC
GGGACGCCTCCGGGCCGGCCATGACCGAGATCGGCGAGCAGCCGTGGGGGCGGGAGTTCGCCCTG
CGCGACCCGGCCGGCAACTGCGTGCACTTCGTGGCCGAGGAGCAGGACTGACCGACGCCGACCAAC
ACCGCCGGTCCGACGGCGGCCCACGGGTCCCAGGGGGGTCGACCTCGAAACTTGTTTATTGCAGCTT
ATAATGGTTACAAATAAAGCAATAGCATCACAAATTTCACAAATAAAGCA I I I I I I I CACTGCATTCTAG
TTGTGGTTTGTCCAAACTCATCAATGTATCTTATCATGTCTTCACGTAATAAGTGTGCGGCTAGCAGTC
AACTAGCAGTCAACACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCT
GTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTA
CCATCTGGCCCCAGTGCTGCAATGATACCGCGAGAACCACGCTCACCGGCTCCAGATTTATCAGCAAT
AAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCT
ATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATT
GCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATC
AAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTG
TCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCA
TGCCATCCGTAAGATGC I I I I CTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGC
GGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAA AGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCA GTTCGATGTAACCCACΓCGTGCACCCAACΓGATCITCAGCATCΓTTTACTTTCACCAGCGTTTCTGGGT GAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACT
CATACTCTTCL I I I I I CAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTT
GAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTACTAG
TGAATGCCCTACTAGAAGATGTGTGTTGCACAAAATGTCCCTGGAATAACCAATTTGAAGTGCAGATA
GCAGTAAACGTAAGCTAATATGAATATTATTTAACTGTAATGTΠTAATATCGCTGGACATTACTAATAA
ACCCACTATAAACACATGTACATATGTATGTTTTGGCATACAATGAGTAGTTGGGGAAAAAATGTGTAA
AAGCACCGTGACCATCACAGCATAAAGATAACCAGCTGAAGTATCGAATATGAGTAACCCCCAAATTG
AATCACATGCCGCAACTGATAGGACCCATGGAAGTACACTCTTCATGGCGATATACAAGACACACACA
AGCACGAACACCCAGTTGCGGAGGAAATTCTCCGTAAATGAAAACCCAATCGGCGAACAATTCATACC
CATATATGGTAAAAGTTTTGAACGCGAGCGAACTTAAGAGCGCCGGAGTATAAATAGAGGCGCTTCGT
CTACGGAGCGACAATTCAATTCAAACAAGCAAAGTGAACACGTCGCTAAGCGAAAGCTAAGCAAATAA
ACAAGCGCAGCTGAACAAGCTAAACAATCTGCAGAAGCTTGGTACCCTCGAGCTCAGCTGAATTCTGG
ATCCTCTAGAAATAATTTTGTTTAACCTTAAGAAGGAGATATACTCAAAATGAAGCTGTGCATACTGCT
GGCCGTCGTGGCCTTTGTTGGCCTCTCGCTCGGGGAAAATTTGTATTTTCAATGCAGGTCGTTCACTA
TTATTTAGTGAAATGAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCCCATGCA
ACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGATTTTTTAGTTCTTTAGGCCCGTAGT
CTGCAAATCL I I I I ATGATTTTCTATCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAG
TCTAATAGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGGCAAGACCTAAAA
TGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCTTACATATTTTAGGTL I I I I I I I ATTGTGCGTA
ACTAACTTGCCATCTTCAAACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAACCTTTACTACCGCACTGCT
GGCAGGAGGCGCAACTCAAGCGTTTGCGAAAGAAACGAACCAAAAGCCATATAAGGAAACATACGGC
ATTTCCCATATTACACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATAAAGTT
CCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAAGGCCTGGACGTTTGGGACAGCTG
GCCATTACAAAACACTGACGGCACTGTCGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCG
GAGATCCTAAAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAAACTTCTATTG
ACAGCTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAATGATTCTATCCTA
AAAGACCAAACACAAGAATGGTCAGGTTCAGCCACATTTACATCTGACGGAAAAATCCGTTTATTCTAC
ACTGATTTCTCCGGTAAACATTACGGCAAACAAACACTGACAACTGCACAAGTTAACGTATCAGCATCA
GACAGCTCTTTGAACATCAACGGTGTAGAGGATTATAAATCAATCTTTGACGGTGACGGAAAAACGTA
TCAAAATGTACAGCAGTTCATCGATGAAGGCAACTACAGCTCAGGCGACAACCATACGCTGAGAGATC
CTCACTACGTAGAAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACTGGAACTGAAGATGGC
TACCAAGGCGAAGAATCTTTATTTAACAAAGCATACTATGGCAAAAGCACATCATTCTTCCGTCAAGAA
AGTCAAAAACTTCTGCAAAGCGATAAAAAACGCACGGCTGAGTTAGCAAACGGCGCTCTCGGTATGAT TGAGCTAAACGATGATTACACACTGAAAAAAGTGATGAAACCGCTGATTGCATCTAACACAGTAACAG
ATGAAATTGAACGCGCGAACGTCTTTAAAATGAACGGCAAATGGTACCTGTTCACTGACTCCCGCGGA
TCAAAAATGACGATTGACGGCATTACGTCΓAACGATATTTACATGCΓTGGTTATGTTTCTAATTCTTTAA
CTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTGTTAAAAATGGATCTTGATCCTAACGATGTA
ACCITTACTTACTCACACTTCGCTGTACCTCAAGCGAAAGGAAACAATGTCGTGATTACAAGCTATATG
ACAAACAGAGGATTCTACGCAGACAAACAATCAACGTTTGCGCCTAGCTTCCTGCTGAACATCAAAGG
CAAGAAAACATCTGTTGTCAAAGACAGCATCCTTGAACAAGGACAATTAACAGTTAACAAATAAAAACG
CAAAAGAAAATGCCGATATCCTATTGGCATTGACGTCAGGTGGCACACCTGCAGAGAACCTCTACTTC
CAATCGCACCATCATCACCACCATGATTACAAGGATGACGACGATAAGTGAGGATCCGAATTCGAGCT
CCGTCGACAAGCΓTGCGGCCGCGGATCGATCGATATCΓGACΓAAATCITAGTTTGTATTGTCATGTTTT
AATACAATATGTTATGTTTAAATATG I I I I I AATAAATTTTATAAAATAATTTCAAC I I I I ATTGTAACAAC ATTGTCCATTTACACACTCCTTTCAAGCGCGTGGGACTCGATGCTCGGCGCCACTCAAAGGCGGTAAT ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCC AGGAACCGTAAAAAGGCCGCGTTGCTGGCG I I I I I CCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC TGGAAG<-TCCCΓCGTGCGCTCΓCCΓGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC CTTCGGGAAGCGTGGCGCT

Claims

1. An isolated DNA polynucleotide suitable for heterologous expression of a polypeptide of interest in an insect cell, said DNA polynucleotide comprising
(a) a promoter DNA polynucleotide comprising at least one sequence selected from the group consisting of:
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO: 3, SEQ ID N0:4,
SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID
NO: 68 with or without flanking restriction site sequences at either terminus;
(ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell;
(iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell;
(v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and
(vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
2. The isolated DNA polynucleotide according to claim 1, wherein said promoter DNA polynucleotide comprises a sequence selected from the group consisting of:
a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 with or without flanking restriction site sequences at either terminus.
3. The isolated DNA polynucleotide according to claim 1, wherein said promoter DNA polynucleotide comprises a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 said functional nucleotide sequence having promoter activity in a Drosophila S2 cell.
4. The isolated DNA polynucleotide according to any one of claims 1-3, wherein said promoter DNA polynucleotide comprises a nucleotide which is functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68, said functional fragment having promoter activity in a Drosophila S2 cell.
5. The isolated DNA polynucleotide according to any one of claims 1-4, wherein said promoter DNA polynucleotide comprises a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of at least 6 contiguous nucleotides of any one sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68 said functional nucleotide sequence having promoter activity in a Drosophila S2 cell.
6. The isolated DNA polynucleotide according to any one of claims 1-5, wherein said promoter DNA polynucleotide comprises a chimeric nucleotide sequence comprising two or more sequences selected from
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4,
SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, or SEQ ID NO:37; (ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a
Drosophila S2 cell; and
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell.
7. The isolated DNA polynucleotide according to any one of claims 1-6, wherein said promoter DNA polynucleotide comprises a chimeric nucleotide sequence as defined in (vi) of claim 1.
8. The isolated DNA polynucleotide according to any one of claims 1-7, wherein said promoter DNA polynucleotide exhibits an increased protein expression level as compared to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4.
9. The isolated DNA polynucleotide according to claim 8, wherein the increase in protein expression level is from about 50 percent to about 300 percent relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4.
10. The isolated DNA polynucleotide according to claim 8, wherein the increase in protein expression level is 2 fold to 10 fold relative to the protein expression level of any one of the promoter DNA polynucleotides having the sequence of SEQ ID NO: 1 or SEQ ID NO:4, or to the pOPIE2 promoter.
11. The isolated DNA polynucleotide according to any one of claims 1-10, which further comprises a selection marker, such as a selection marker selected from the group consisting of a Zeocin selection marker, a Neomycin selection marker, a Hygromycin selection marker, a Puromycin selection marker, and a Blasticidin selection marker.
12. The isolated DNA polynucleotide according to claim 11, which further comprises a bacterial promoter, such as the pKANR bacterial promoter.
13. The isolated DNA polynucleotide according to any one of claims 11 or 12, which further comprises a second promoter DNA polynucleotide suitable to drive the expression of the selection marker in an insect cell.
14. The isolated DNA polynucleotide according to claim 13, wherein said second promoter is selected from the group consisting of
(i) a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or a nucleotide sequence comprising residues 7-586 of SEQ ID NO: 68;
(ii) a functional nucleotide sequence with a sequence identity of at least 80% to any one sequence of (i) and having promoter activity in a Drosophila S2 cell; (iii) a nucleotide which is a functional fragment of at least 6 contiguous nucleotides of any one sequence of (i) or (ii), said functional fragment having promoter activity in a Drosophila S2 cell;
(iv) a functional nucleotide sequence with a sequence identity of at least 80% to said functional fragment of (iii) and having promoter activity in a Drosophila S2 cell; (v) a first chimeric nucleotide sequence comprising two or more sequences of any one sequence of (i), (ii), (iii) and (iv), and (vi) a second chimeric nucleotide sequence having promoter activity in a Drosophila S2 cell, comprising at least 6 nucleotides and including consecutive nucleotide stretches from at least 2 nucleotide sequences of (iii) and/or (iv), where each of said consecutive stretches alone does not have promoter activity in a Drosophila S2 cell.
15. The isolated DNA polynucleotide according to any one of claims 1-14, which further comprises at least one ubiquitous chromatin opening element upstream and/or downstream relative to a multiple cloning site.
16. The isolated DNA polynucleotide according to any one of claims 1-15, which further comprises at least one Transcriptional insulator element, such as the Gypsy (gsu(Hw)) insulator sequence.
17. The isolated DNA polynucleotide according to any one of claims 1-16, which further comprises a dihydrofolate reductase (dhfr) coding sequence suitable for selection in insect cells.
18. The isolated DNA polynucleotide according to any one of claims 1-17, which further comprises at least one polyadenylation signal sequence such as SV40 polyA signal and/or an OPIE2 polyA signal.
19. The isolated DNA polynucleotide according to any one of claims 1-18, which further comprises an E.coli origin of replication.
20. The isolated DNA polynucleotide according to any one of claims 1-19, which further comprises at least one protein export signal polynucleotide sequence, such as one selected from the list consisting of BIP and CPY.
21. The isolated DNA polynucleotide according to any one of claims 1-20, which is essentially free of viral DNA.
22. The isolated DNA polynucleotide according to any one of claims 1-21, which further comprises at least one HIS-tag sequence.
23. The isolated DNA polynucleotide according to any one of claims 1-22, which further comprises a multiple cloning site downstream of said promoter DNA polynucleotide for insertion of the gene encoding a polypeptide of interest into said isolated DNA polynucleotide.
24. The isolated DNA polynucleotide according to any one of claims 1-23, which further comprises at least one 72bp elements from SV40.
25. The isolated DNA polynucleotide according to any one of claims 1-24, which further comprises at least one amplification control element.
26. The isolated DNA polynucleotide according to any one of claims 1-25, which further comprises at least one Ori-beta element.
27. The isolated DNA polynucleotide according to any one of claims 1-26, which further comprises at least one matrix attachment region (MAR) element.
28, The isolated DNA polynucleotide according to any one of claims 1-27, which further comprises at least one PRE element from Hepatitis B virus, such as a PRE element from Hepatitis B virus according to SEQ ID NO:40, such as nucleotides 10 to 574 of SEQ ID NO:40.
29. The isolated DNA polynucleotide according to any one of claims 1-28, wherein the promoter DNA polynucleotide sequence controls the expression of a gene or other DNA sequence to which it is linked.
30. The isolated DNA polynucleotide according to any one of claims 1-29, which further comprises at least one nucleotide sequence which is a functional fragment of at least three contiguous nucleotides of any one sequence of a nucleotide sequence of SEQ ID NO: 1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4, SEQ ID NO:5, SEQ ID NO:6, SEQ ID NO:33, SEQ ID NO:36, SEQ ID NO:37, or SEQ ID NO: 68; and a functional nucleotide sequence with a sequence identity of at least 80% thereof, said functional fragment having promoter enhancer activity in a Drosophila S2 cell.
31. The isolated DNA polynucleotide according to any one of claims 1-30, which further comprises at least one intron, such as the intron shown in SEQ ID NO: 60 including or excluding the flanking restriction sites, downstream of the promoter DNA polynucleotide sequence and upstream of a multiple cloning site.
32. The isolated DNA polynucleotide according to any one of the preceding claims, which is adapted for ligation independent cloning (LIC).
33. The isolated DNA polynucleotide according to any one of claims 1-31, which further comprises at least one polynucleotide sequence encoding a polypeptide heterologous to said promoter DNA polynucleotide sequence.
34. A cell comprising the isolated DNA polynucleotide according to any one of claims 1-33.
35. The cell according to claim 34, which is an insect cell, such as Drosophila melanogaster.
36. The cell according to claims 34 or 35, which is stably transfected with said isolated DNA polynucleotide.
37. A method for the production of a polypeptide of interest encoded by a polynucleotide the method comprising the steps of
(a) obtaining a polynucleotide sequence encoding the polypeptide of interest;
(b) inserting said polynucleotide sequence encoding the polypeptide of interest into the isolated DNA polynucleotide according to any one of claims 1-32;
(c) transforming a host cell with the polynucleotide obtained under step (b);
(d) allowing for the expression of said polynucleotide obtained under step (b) to produce the polypeptide; and
(e) obtaining the polypeptide there from.
38. A polypeptide produced by a method according to claim 37.
PCT/EP2009/057278 2008-06-12 2009-06-12 Improved protein expression system WO2009150222A2 (en)

Priority Applications (8)

Application Number Priority Date Filing Date Title
AU2009256566A AU2009256566B2 (en) 2008-06-12 2009-06-12 Improved protein expression system
DK09761784.9T DK2307543T3 (en) 2008-06-12 2009-06-12 Improved protein expression system
EP09761784.9A EP2307543B1 (en) 2008-06-12 2009-06-12 Improved protein expression system
ES09761784.9T ES2543730T3 (en) 2008-06-12 2009-06-12 Enhanced protein expression system
JP2011512990A JP5374584B2 (en) 2008-06-12 2009-06-12 Improved protein expression system
CA2727628A CA2727628C (en) 2008-06-12 2009-06-12 Improved protein expression system
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Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2013174889A1 (en) 2012-05-23 2013-11-28 Expres2Ion Biotechnologies Aps Novel drosophila s2 cell line
WO2021156267A1 (en) 2020-02-04 2021-08-12 Curevac Ag Coronavirus vaccine
WO2021239880A1 (en) 2020-05-29 2021-12-02 Curevac Ag Nucleic acid based combination vaccines
WO2022043551A2 (en) 2020-08-31 2022-03-03 Curevac Ag Multivalent nucleic acid based coronavirus vaccines
WO2023196634A2 (en) 2022-04-08 2023-10-12 Flagship Pioneering Innovations Vii, Llc Vaccines and related methods
WO2024030856A2 (en) 2022-08-01 2024-02-08 Flagship Pioneering Innovations Vii, Llc Immunomodulatory proteins and related methods
WO2024077118A2 (en) 2022-10-06 2024-04-11 Bicara Therapeutics Inc. Multispecific proteins and related methods

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105543275B (en) * 2016-01-21 2019-07-19 湖南大学 Double gene expression vector and its application
DE102019004812B4 (en) 2019-07-10 2021-03-18 Institut Virion-Serion GmbH Würzburg Rubella Virus Spike Construct
CN113430227A (en) * 2020-03-23 2021-09-24 佛山汉腾生物科技有限公司 Method for preparing stable cell pool, protein expression method and kit
CN113699264B (en) * 2021-08-12 2023-06-16 贵州大学 Fluorescent in-situ hybridization probe for identifying common wheat B group chromosome and design method and application thereof

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TW502065B (en) 1993-05-28 2002-09-11 American Cyanamid Co Gene insertion by direct ligation in vitro
CN1186856A (en) * 1996-12-31 1998-07-08 中国科学院武汉病毒研究所 Rhabdovirus transfer carrier containing three promoters
CA2337963A1 (en) * 1998-07-31 2000-02-17 Robin Henry Lachmann Latency-active regulatory sequences of herpesviruses and latency-inactive herpesvirus for gene transfer
US7135558B1 (en) * 1999-12-23 2006-11-14 Applera Corporation Isolated Drosophila proteins essential for survival nucleic acid molecules encoding essential Drosophila proteins, and uses thereof as insecticidal targets
CN1109105C (en) * 2000-11-16 2003-05-21 中国科学院武汉病毒研究所 Genetically engineered virus of Chinese ballworm
GB2404382B (en) * 2003-07-28 2008-01-30 Oxitec Ltd Pest control
CN101586119B (en) * 2009-05-15 2011-04-06 中国科学院水生生物研究所 Tetrahymena transgenic carrier containing HSP70 promoter and GFP and preparation method and use thereof

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
ANGELICHIO ET AL., NUCLEIC ACIDS RESEARCH, vol. 19, no. 18, 1991, pages 5037 - 5043
CHUNG ET AL., MOLECULAR AND CELLULAR BIOLOGY, vol. 10, no. 12, 1992
MOL CELL BIOL., vol. 17, no. 4, April 1997 (1997-04-01), pages 2202 - 2206

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WO2022043551A2 (en) 2020-08-31 2022-03-03 Curevac Ag Multivalent nucleic acid based coronavirus vaccines
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ES2543730T3 (en) 2015-08-21

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